Multiple sequence alignment - TraesCS3A01G000800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G000800 chr3A 100.000 4661 0 0 1 4661 401719 397059 0.000000e+00 8608.0
1 TraesCS3A01G000800 chr3A 86.838 699 79 10 2116 2804 372627 371932 0.000000e+00 769.0
2 TraesCS3A01G000800 chr3A 81.145 716 97 22 3098 3782 371921 371213 1.480000e-149 540.0
3 TraesCS3A01G000800 chr3A 82.135 431 77 0 2338 2768 206413 205983 2.050000e-98 370.0
4 TraesCS3A01G000800 chr3A 86.090 266 30 6 996 1260 373863 373604 3.550000e-71 279.0
5 TraesCS3A01G000800 chr3A 88.776 98 11 0 1974 2071 734786358 734786261 2.280000e-23 121.0
6 TraesCS3A01G000800 chr3A 85.263 95 14 0 1977 2071 579387221 579387127 1.070000e-16 99.0
7 TraesCS3A01G000800 chr3D 94.611 1169 37 10 3098 4257 3222793 3221642 0.000000e+00 1786.0
8 TraesCS3A01G000800 chr3D 89.017 1475 111 22 1 1430 3225491 3224023 0.000000e+00 1779.0
9 TraesCS3A01G000800 chr3D 97.175 708 17 3 2111 2816 3223496 3222790 0.000000e+00 1194.0
10 TraesCS3A01G000800 chr3D 87.372 681 71 12 2083 2755 3197961 3197288 0.000000e+00 767.0
11 TraesCS3A01G000800 chr3D 93.600 500 24 4 1582 2080 3223990 3223498 0.000000e+00 739.0
12 TraesCS3A01G000800 chr3D 84.946 465 62 7 3203 3665 3197168 3196710 9.130000e-127 464.0
13 TraesCS3A01G000800 chr3D 79.836 610 79 25 664 1260 3199455 3198877 5.620000e-109 405.0
14 TraesCS3A01G000800 chr3D 89.655 261 13 3 4255 4502 447585143 447584884 2.090000e-83 320.0
15 TraesCS3A01G000800 chr3D 96.894 161 5 0 4501 4661 3221644 3221484 2.140000e-68 270.0
16 TraesCS3A01G000800 chr3D 82.578 287 50 0 2487 2773 3151925 3151639 2.150000e-63 254.0
17 TraesCS3A01G000800 chr3D 80.524 267 37 6 4255 4506 282527795 282527529 1.710000e-44 191.0
18 TraesCS3A01G000800 chr3D 80.377 265 35 4 4254 4505 107043539 107043799 7.960000e-43 185.0
19 TraesCS3A01G000800 chr3D 86.486 111 15 0 2338 2448 3152032 3151922 6.330000e-24 122.0
20 TraesCS3A01G000800 chr3D 95.652 46 0 1 597 642 3199673 3199630 6.470000e-09 73.1
21 TraesCS3A01G000800 chr3D 95.238 42 0 2 1974 2014 518146518 518146478 1.080000e-06 65.8
22 TraesCS3A01G000800 chr3B 88.508 1166 98 24 3100 4257 2298868 2300005 0.000000e+00 1378.0
23 TraesCS3A01G000800 chr3B 87.769 1210 96 28 246 1430 2295953 2297135 0.000000e+00 1367.0
24 TraesCS3A01G000800 chr3B 89.613 982 88 12 3100 4075 2170071 2169098 0.000000e+00 1236.0
25 TraesCS3A01G000800 chr3B 94.422 735 36 4 2075 2807 2298129 2298860 0.000000e+00 1125.0
26 TraesCS3A01G000800 chr3B 93.952 744 40 4 2075 2816 2170810 2170070 0.000000e+00 1120.0
27 TraesCS3A01G000800 chr3B 92.755 773 43 4 663 1430 2172552 2171788 0.000000e+00 1105.0
28 TraesCS3A01G000800 chr3B 87.333 750 74 15 2082 2816 2309744 2310487 0.000000e+00 839.0
29 TraesCS3A01G000800 chr3B 86.512 734 80 14 2093 2816 2161961 2161237 0.000000e+00 789.0
30 TraesCS3A01G000800 chr3B 87.188 640 52 11 1449 2078 2171802 2171183 0.000000e+00 701.0
31 TraesCS3A01G000800 chr3B 79.093 904 121 39 3200 4075 2310610 2311473 1.130000e-155 560.0
32 TraesCS3A01G000800 chr3B 91.205 307 19 6 1665 1969 2297401 2297701 1.210000e-110 411.0
33 TraesCS3A01G000800 chr3B 85.519 366 41 6 301 655 2173081 2172717 5.700000e-99 372.0
34 TraesCS3A01G000800 chr3B 86.466 266 33 3 996 1260 2308481 2308744 5.900000e-74 289.0
35 TraesCS3A01G000800 chr3B 88.210 229 14 3 1448 1665 2297120 2297346 1.290000e-65 261.0
36 TraesCS3A01G000800 chr3B 93.789 161 10 0 4501 4661 2300003 2300163 4.660000e-60 243.0
37 TraesCS3A01G000800 chr3B 93.168 161 11 0 4501 4661 2168886 2168726 2.170000e-58 237.0
38 TraesCS3A01G000800 chr3B 88.542 192 16 3 996 1187 2163429 2163244 1.300000e-55 228.0
39 TraesCS3A01G000800 chr3B 76.494 251 41 14 3591 3831 2128446 2128204 2.280000e-23 121.0
40 TraesCS3A01G000800 chr3B 95.652 46 0 1 597 642 2308155 2308198 6.470000e-09 73.1
41 TraesCS3A01G000800 chr1D 93.919 296 16 2 2810 3103 335008172 335007877 3.310000e-121 446.0
42 TraesCS3A01G000800 chr1D 94.158 291 16 1 2812 3101 245785333 245785043 4.280000e-120 442.0
43 TraesCS3A01G000800 chr1D 89.299 271 15 3 4252 4508 97740416 97740146 1.250000e-85 327.0
44 TraesCS3A01G000800 chr6B 94.326 282 15 1 2811 3091 396765821 396766102 9.270000e-117 431.0
45 TraesCS3A01G000800 chr5D 93.151 292 19 1 2812 3102 108405715 108405424 1.200000e-115 427.0
46 TraesCS3A01G000800 chr7D 93.127 291 19 1 2813 3102 209496561 209496851 4.310000e-115 425.0
47 TraesCS3A01G000800 chr7D 87.149 249 28 1 4255 4503 509625088 509624844 3.550000e-71 279.0
48 TraesCS3A01G000800 chr7D 81.648 267 36 2 4253 4506 182347415 182347681 4.730000e-50 209.0
49 TraesCS3A01G000800 chr7D 87.179 78 10 0 1982 2059 34004192 34004269 6.420000e-14 89.8
50 TraesCS3A01G000800 chr4D 92.857 294 20 1 2809 3101 104582940 104583233 4.310000e-115 425.0
51 TraesCS3A01G000800 chr4D 88.015 267 18 3 4255 4508 479154225 479154490 2.110000e-78 303.0
52 TraesCS3A01G000800 chr4A 92.230 296 21 2 2808 3101 61742295 61742000 7.210000e-113 418.0
53 TraesCS3A01G000800 chr4A 82.653 98 17 0 1974 2071 362103039 362103136 2.310000e-13 87.9
54 TraesCS3A01G000800 chr2A 93.031 287 19 1 2813 3098 455343624 455343910 7.210000e-113 418.0
55 TraesCS3A01G000800 chr4B 92.230 296 20 3 2808 3100 151931609 151931904 2.590000e-112 416.0
56 TraesCS3A01G000800 chr4B 93.035 201 14 0 4254 4454 457068471 457068271 1.270000e-75 294.0
57 TraesCS3A01G000800 chr4B 83.092 207 26 7 3581 3784 653428015 653427815 3.710000e-41 180.0
58 TraesCS3A01G000800 chr4B 81.340 209 29 7 3578 3784 653012796 653012996 1.340000e-35 161.0
59 TraesCS3A01G000800 chr2B 89.474 266 14 3 4253 4505 357919557 357919821 1.620000e-84 324.0
60 TraesCS3A01G000800 chr1B 88.679 265 17 5 4254 4505 211478858 211479122 1.260000e-80 311.0
61 TraesCS3A01G000800 chr1B 75.182 274 32 22 4255 4503 653281961 653281699 3.840000e-16 97.1
62 TraesCS3A01G000800 chr7A 88.390 267 17 3 4255 4508 44210819 44210554 4.530000e-80 309.0
63 TraesCS3A01G000800 chr5B 87.550 249 29 1 4255 4503 686420381 686420135 2.120000e-73 287.0
64 TraesCS3A01G000800 chr2D 80.682 264 38 2 4255 4505 485487280 485487543 4.760000e-45 193.0
65 TraesCS3A01G000800 chr5A 79.348 276 46 7 4255 4519 87573627 87573902 2.860000e-42 183.0
66 TraesCS3A01G000800 chr5A 80.102 196 30 8 3591 3784 690565582 690565770 2.260000e-28 137.0
67 TraesCS3A01G000800 chrUn 80.769 208 30 7 3578 3783 126950718 126950519 2.250000e-33 154.0
68 TraesCS3A01G000800 chr7B 93.548 62 2 2 4456 4517 717634552 717634611 1.790000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G000800 chr3A 397059 401719 4660 True 8608.000000 8608 100.000000 1 4661 1 chr3A.!!$R2 4660
1 TraesCS3A01G000800 chr3A 371213 373863 2650 True 529.333333 769 84.691000 996 3782 3 chr3A.!!$R5 2786
2 TraesCS3A01G000800 chr3D 3221484 3225491 4007 True 1153.600000 1786 94.259400 1 4661 5 chr3D.!!$R6 4660
3 TraesCS3A01G000800 chr3D 3196710 3199673 2963 True 427.275000 767 86.951500 597 3665 4 chr3D.!!$R5 3068
4 TraesCS3A01G000800 chr3B 2295953 2300163 4210 False 797.500000 1378 90.650500 246 4661 6 chr3B.!!$F1 4415
5 TraesCS3A01G000800 chr3B 2168726 2173081 4355 True 795.166667 1236 90.365833 301 4661 6 chr3B.!!$R3 4360
6 TraesCS3A01G000800 chr3B 2161237 2163429 2192 True 508.500000 789 87.527000 996 2816 2 chr3B.!!$R2 1820
7 TraesCS3A01G000800 chr3B 2308155 2311473 3318 False 440.275000 839 87.136000 597 4075 4 chr3B.!!$F2 3478

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
760 985 0.185901 GCCTGCCATTATCCTTGGGA 59.814 55.000 0.0 0.0 34.66 4.37 F
958 1195 0.325671 TCACTCCTCCTCACCCATCC 60.326 60.000 0.0 0.0 0.00 3.51 F
1516 1996 2.418280 CCGGGCATTTAATTTTGTTGGC 59.582 45.455 0.0 0.0 0.00 4.52 F
3009 4312 2.774234 AGCTATGTTACCACATGCCTCT 59.226 45.455 0.0 0.0 43.92 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1908 2549 0.978907 AAGACCCCGTACGTCCATTT 59.021 50.000 15.21 0.24 0.00 2.32 R
2814 4117 1.008938 ACTCCCCATTCTGGCTAGTCT 59.991 52.381 0.00 0.00 35.79 3.24 R
3021 4324 0.037697 AGACGACGTGGCAAGCAATA 60.038 50.000 4.58 0.00 0.00 1.90 R
4502 5923 0.813184 GCCCACATGTCCACATCTTG 59.187 55.000 0.00 0.00 33.61 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 4.090588 GTCACCCGGGATGGCGAA 62.091 66.667 32.02 2.68 35.87 4.70
46 47 1.893808 CCGGGATGGCGAAATGGAG 60.894 63.158 0.00 0.00 0.00 3.86
79 80 4.568956 AGAGCTGTTTGTTTTTGTTGCTT 58.431 34.783 0.00 0.00 0.00 3.91
80 81 4.996758 AGAGCTGTTTGTTTTTGTTGCTTT 59.003 33.333 0.00 0.00 0.00 3.51
86 87 7.440523 TGTTTGTTTTTGTTGCTTTAACCAT 57.559 28.000 0.00 0.00 38.55 3.55
117 122 4.101119 CCTTATGACGACTTATGAAGGGGT 59.899 45.833 0.00 0.00 0.00 4.95
127 132 0.962356 ATGAAGGGGTCTTTGCTGCG 60.962 55.000 0.00 0.00 32.52 5.18
146 151 2.159282 GCGAGACCTAGGAATTTGTCGA 60.159 50.000 17.98 0.00 33.04 4.20
150 155 4.279145 AGACCTAGGAATTTGTCGAGCTA 58.721 43.478 17.98 0.00 33.04 3.32
154 159 1.134371 AGGAATTTGTCGAGCTAGGCC 60.134 52.381 0.00 0.00 0.00 5.19
168 173 2.203408 GGCCCTGATAAGCCTGGC 60.203 66.667 11.65 11.65 46.14 4.85
172 177 0.768221 CCCTGATAAGCCTGGCCCTA 60.768 60.000 16.57 7.85 0.00 3.53
353 371 1.061276 GAAGACATTTCGAGCTTCCGC 59.939 52.381 0.00 0.00 32.63 5.54
356 377 2.124695 ATTTCGAGCTTCCGCCCC 60.125 61.111 0.00 0.00 36.60 5.80
415 441 1.202076 GCTATTTGCTCGTGTTGCTCC 60.202 52.381 0.00 0.00 38.95 4.70
442 469 6.432783 ACAACCACATTTTTCGAATCTATGGA 59.567 34.615 17.76 0.00 0.00 3.41
519 551 1.400500 CGATTTGGTGCGGTGGTAAAC 60.400 52.381 0.00 0.00 0.00 2.01
531 563 4.555313 GCGGTGGTAAACTAAGTTTTGGTC 60.555 45.833 0.00 0.00 37.01 4.02
547 579 4.345859 TTGGTCGTGAATCAAAGTACCT 57.654 40.909 0.00 0.00 0.00 3.08
550 582 4.062991 GGTCGTGAATCAAAGTACCTGTT 58.937 43.478 0.00 0.00 0.00 3.16
562 594 7.110155 TCAAAGTACCTGTTGATATTTCCCTC 58.890 38.462 1.23 0.00 0.00 4.30
567 599 6.840780 ACCTGTTGATATTTCCCTCAAAAG 57.159 37.500 0.00 0.00 36.76 2.27
568 600 6.212888 CCTGTTGATATTTCCCTCAAAAGG 57.787 41.667 7.02 7.02 45.71 3.11
580 615 6.840090 TCCCTCAAAAGGTGATAATATCCA 57.160 37.500 0.00 0.00 41.59 3.41
585 620 7.725397 CCTCAAAAGGTGATAATATCCATGGAA 59.275 37.037 20.67 8.82 37.94 3.53
586 621 8.696043 TCAAAAGGTGATAATATCCATGGAAG 57.304 34.615 20.67 0.00 0.00 3.46
587 622 8.281531 TCAAAAGGTGATAATATCCATGGAAGT 58.718 33.333 20.67 5.70 0.00 3.01
591 626 9.492730 AAGGTGATAATATCCATGGAAGTTTTT 57.507 29.630 20.67 10.39 0.00 1.94
647 690 5.714333 TCACCAGTGCAACCACATATATTTT 59.286 36.000 0.00 0.00 44.53 1.82
725 941 7.971168 CACACATATATCTAGCTACTTAGGCAC 59.029 40.741 0.00 0.00 0.00 5.01
748 973 4.051167 CCACATCCTGGCCTGCCA 62.051 66.667 10.98 10.98 45.02 4.92
755 980 0.698886 TCCTGGCCTGCCATTATCCT 60.699 55.000 11.98 0.00 46.15 3.24
760 985 0.185901 GCCTGCCATTATCCTTGGGA 59.814 55.000 0.00 0.00 34.66 4.37
772 997 1.968017 CTTGGGAGCGCACACACAT 60.968 57.895 10.01 0.00 0.00 3.21
958 1195 0.325671 TCACTCCTCCTCACCCATCC 60.326 60.000 0.00 0.00 0.00 3.51
984 1221 3.181479 CCTCCATCATTCTGGTTGCATTG 60.181 47.826 0.00 0.00 37.57 2.82
1235 1528 8.887264 TTTGTTCCCCTTTTAGCTGAATTATA 57.113 30.769 0.00 0.00 0.00 0.98
1304 1649 8.926710 AGATGAACACGTTTAGTTATTCTGAAG 58.073 33.333 0.00 0.00 0.00 3.02
1307 1652 7.707464 TGAACACGTTTAGTTATTCTGAAGTCA 59.293 33.333 0.00 0.00 0.00 3.41
1368 1741 8.739972 ACATTTATTTCACTCTACCCAATTCAC 58.260 33.333 0.00 0.00 0.00 3.18
1425 1891 6.703607 GTCCTTCTCATCACATGAAATATCGT 59.296 38.462 0.00 0.00 39.11 3.73
1426 1892 7.867909 GTCCTTCTCATCACATGAAATATCGTA 59.132 37.037 0.00 0.00 39.11 3.43
1427 1893 8.421002 TCCTTCTCATCACATGAAATATCGTAA 58.579 33.333 0.00 0.00 39.11 3.18
1428 1894 9.212641 CCTTCTCATCACATGAAATATCGTAAT 57.787 33.333 0.00 0.00 39.11 1.89
1431 1897 9.987272 TCTCATCACATGAAATATCGTAATCTT 57.013 29.630 0.00 0.00 39.11 2.40
1516 1996 2.418280 CCGGGCATTTAATTTTGTTGGC 59.582 45.455 0.00 0.00 0.00 4.52
1642 2158 3.457380 ACAATCATGCTATGGACCTCACT 59.543 43.478 0.00 0.00 0.00 3.41
1644 2160 3.548745 TCATGCTATGGACCTCACTTG 57.451 47.619 0.00 0.00 0.00 3.16
1790 2431 6.363088 AGTGTCATGTTTGAAATGCGTAATTG 59.637 34.615 0.00 0.00 32.48 2.32
1851 2492 4.610945 CTCAAAAACTGAGCACGGAATTT 58.389 39.130 0.00 0.00 45.11 1.82
1910 2551 8.845413 ATGCTTTATTAATTTTGTGCCTCAAA 57.155 26.923 0.00 0.97 43.24 2.69
2037 2678 6.701841 AGCATTGAAATACGTCGAGATACATT 59.298 34.615 0.00 0.00 0.00 2.71
2048 2689 4.051237 TCGAGATACATTCATTTCAGCGG 58.949 43.478 0.00 0.00 0.00 5.52
2349 3651 9.691362 AACAATGTTGGACTTTAAATGTGTATC 57.309 29.630 0.00 0.00 0.00 2.24
2783 4085 4.392940 GGTATAGCCTTTCACATCTGCAT 58.607 43.478 0.00 0.00 0.00 3.96
2784 4086 4.823989 GGTATAGCCTTTCACATCTGCATT 59.176 41.667 0.00 0.00 0.00 3.56
2818 4121 8.561738 CAACCCATGTTGTAAAGTATAAGACT 57.438 34.615 0.00 0.00 45.51 3.24
2819 4122 9.661563 CAACCCATGTTGTAAAGTATAAGACTA 57.338 33.333 0.00 0.00 45.51 2.59
2820 4123 9.886132 AACCCATGTTGTAAAGTATAAGACTAG 57.114 33.333 0.00 0.00 32.72 2.57
2821 4124 7.985752 ACCCATGTTGTAAAGTATAAGACTAGC 59.014 37.037 0.00 0.00 37.44 3.42
2822 4125 7.441458 CCCATGTTGTAAAGTATAAGACTAGCC 59.559 40.741 0.00 0.00 37.44 3.93
2823 4126 7.985184 CCATGTTGTAAAGTATAAGACTAGCCA 59.015 37.037 0.00 0.00 37.44 4.75
2824 4127 9.035607 CATGTTGTAAAGTATAAGACTAGCCAG 57.964 37.037 0.00 0.00 37.44 4.85
2825 4128 8.357290 TGTTGTAAAGTATAAGACTAGCCAGA 57.643 34.615 0.00 0.00 37.44 3.86
2826 4129 8.809066 TGTTGTAAAGTATAAGACTAGCCAGAA 58.191 33.333 0.00 0.00 37.44 3.02
2827 4130 9.819267 GTTGTAAAGTATAAGACTAGCCAGAAT 57.181 33.333 0.00 0.00 37.44 2.40
2828 4131 9.817809 TTGTAAAGTATAAGACTAGCCAGAATG 57.182 33.333 0.00 0.00 37.44 2.67
2844 4147 5.941555 CAGAATGGGGAGTAACTTAGACT 57.058 43.478 0.00 0.00 0.00 3.24
2846 4149 7.045126 CAGAATGGGGAGTAACTTAGACTAG 57.955 44.000 0.00 0.00 0.00 2.57
2847 4150 6.608002 CAGAATGGGGAGTAACTTAGACTAGT 59.392 42.308 0.00 0.00 0.00 2.57
2848 4151 7.778853 CAGAATGGGGAGTAACTTAGACTAGTA 59.221 40.741 0.00 0.00 0.00 1.82
2849 4152 8.342270 AGAATGGGGAGTAACTTAGACTAGTAA 58.658 37.037 0.00 0.00 0.00 2.24
2850 4153 7.894753 ATGGGGAGTAACTTAGACTAGTAAC 57.105 40.000 0.00 0.00 0.00 2.50
2851 4154 6.793478 TGGGGAGTAACTTAGACTAGTAACA 58.207 40.000 0.00 0.00 0.00 2.41
2852 4155 7.416731 TGGGGAGTAACTTAGACTAGTAACAT 58.583 38.462 0.00 0.00 0.00 2.71
2853 4156 7.341256 TGGGGAGTAACTTAGACTAGTAACATG 59.659 40.741 0.00 0.00 0.00 3.21
2854 4157 7.201835 GGGAGTAACTTAGACTAGTAACATGC 58.798 42.308 0.00 0.00 0.00 4.06
2855 4158 7.201835 GGAGTAACTTAGACTAGTAACATGCC 58.798 42.308 0.00 0.00 0.00 4.40
2856 4159 7.068470 GGAGTAACTTAGACTAGTAACATGCCT 59.932 40.741 0.00 0.00 0.00 4.75
2857 4160 9.118300 GAGTAACTTAGACTAGTAACATGCCTA 57.882 37.037 0.00 0.00 0.00 3.93
2858 4161 9.643735 AGTAACTTAGACTAGTAACATGCCTAT 57.356 33.333 0.00 0.00 0.00 2.57
2859 4162 9.680315 GTAACTTAGACTAGTAACATGCCTATG 57.320 37.037 0.00 0.00 40.24 2.23
2873 4176 7.841282 ACATGCCTATGTTACTAGTCTATGT 57.159 36.000 0.00 0.00 45.01 2.29
2874 4177 8.251383 ACATGCCTATGTTACTAGTCTATGTT 57.749 34.615 0.00 0.00 45.01 2.71
2875 4178 9.363401 ACATGCCTATGTTACTAGTCTATGTTA 57.637 33.333 0.00 0.00 45.01 2.41
2876 4179 9.627395 CATGCCTATGTTACTAGTCTATGTTAC 57.373 37.037 0.00 0.00 0.00 2.50
2877 4180 8.991783 TGCCTATGTTACTAGTCTATGTTACT 57.008 34.615 0.00 0.00 0.00 2.24
2891 4194 8.384718 AGTCTATGTTACTACCTCTATAGTGGG 58.615 40.741 21.82 16.23 36.09 4.61
2892 4195 8.381636 GTCTATGTTACTACCTCTATAGTGGGA 58.618 40.741 21.82 14.49 36.09 4.37
2893 4196 8.952602 TCTATGTTACTACCTCTATAGTGGGAA 58.047 37.037 21.82 10.70 36.09 3.97
2894 4197 9.233649 CTATGTTACTACCTCTATAGTGGGAAG 57.766 40.741 21.82 19.36 36.09 3.46
2895 4198 6.978261 TGTTACTACCTCTATAGTGGGAAGT 58.022 40.000 23.48 23.48 36.09 3.01
2896 4199 8.106017 TGTTACTACCTCTATAGTGGGAAGTA 57.894 38.462 21.82 22.01 36.09 2.24
2897 4200 8.560039 TGTTACTACCTCTATAGTGGGAAGTAA 58.440 37.037 27.07 27.07 38.04 2.24
2898 4201 8.845227 GTTACTACCTCTATAGTGGGAAGTAAC 58.155 40.741 33.17 33.17 43.99 2.50
2899 4202 6.978261 ACTACCTCTATAGTGGGAAGTAACA 58.022 40.000 21.82 0.29 34.02 2.41
2900 4203 7.593653 ACTACCTCTATAGTGGGAAGTAACAT 58.406 38.462 21.82 3.60 34.02 2.71
2901 4204 8.730948 ACTACCTCTATAGTGGGAAGTAACATA 58.269 37.037 21.82 4.45 34.02 2.29
2902 4205 9.756571 CTACCTCTATAGTGGGAAGTAACATAT 57.243 37.037 21.82 2.54 33.22 1.78
2912 4215 9.998106 AGTGGGAAGTAACATATATGTGATAAC 57.002 33.333 18.94 13.91 41.61 1.89
2913 4216 9.772973 GTGGGAAGTAACATATATGTGATAACA 57.227 33.333 18.94 9.72 41.61 2.41
2922 4225 8.681486 ACATATATGTGATAACATGCAACACT 57.319 30.769 17.60 0.00 40.03 3.55
2923 4226 9.123902 ACATATATGTGATAACATGCAACACTT 57.876 29.630 17.60 6.11 40.03 3.16
2924 4227 9.603298 CATATATGTGATAACATGCAACACTTC 57.397 33.333 5.89 0.00 33.41 3.01
2925 4228 5.963176 ATGTGATAACATGCAACACTTCA 57.037 34.783 0.00 0.00 33.41 3.02
2926 4229 5.963176 TGTGATAACATGCAACACTTCAT 57.037 34.783 0.00 0.00 33.41 2.57
2927 4230 6.330004 TGTGATAACATGCAACACTTCATT 57.670 33.333 0.00 0.00 33.41 2.57
2928 4231 6.747125 TGTGATAACATGCAACACTTCATTT 58.253 32.000 0.00 0.00 33.41 2.32
2929 4232 7.880105 TGTGATAACATGCAACACTTCATTTA 58.120 30.769 0.00 0.00 33.41 1.40
2930 4233 8.522003 TGTGATAACATGCAACACTTCATTTAT 58.478 29.630 0.00 0.00 33.41 1.40
2931 4234 9.357652 GTGATAACATGCAACACTTCATTTATT 57.642 29.630 0.00 0.00 0.00 1.40
2935 4238 7.466746 ACATGCAACACTTCATTTATTAGGT 57.533 32.000 0.00 0.00 0.00 3.08
2936 4239 8.574251 ACATGCAACACTTCATTTATTAGGTA 57.426 30.769 0.00 0.00 0.00 3.08
2937 4240 9.189156 ACATGCAACACTTCATTTATTAGGTAT 57.811 29.630 0.00 0.00 0.00 2.73
2954 4257 7.841282 TTAGGTATAGACTCATCTTCCCTTG 57.159 40.000 0.00 0.00 36.29 3.61
2955 4258 6.031964 AGGTATAGACTCATCTTCCCTTGA 57.968 41.667 0.00 0.00 36.29 3.02
2956 4259 6.629156 AGGTATAGACTCATCTTCCCTTGAT 58.371 40.000 0.00 0.00 36.29 2.57
2957 4260 7.770662 AGGTATAGACTCATCTTCCCTTGATA 58.229 38.462 0.00 0.00 36.29 2.15
2958 4261 8.405850 AGGTATAGACTCATCTTCCCTTGATAT 58.594 37.037 0.00 0.00 36.29 1.63
2959 4262 8.474025 GGTATAGACTCATCTTCCCTTGATATG 58.526 40.741 0.00 0.00 36.29 1.78
2960 4263 9.030452 GTATAGACTCATCTTCCCTTGATATGT 57.970 37.037 0.00 0.00 36.29 2.29
2961 4264 6.172136 AGACTCATCTTCCCTTGATATGTG 57.828 41.667 0.00 0.00 0.00 3.21
2962 4265 5.664908 AGACTCATCTTCCCTTGATATGTGT 59.335 40.000 0.00 0.00 0.00 3.72
2963 4266 5.678583 ACTCATCTTCCCTTGATATGTGTG 58.321 41.667 0.00 0.00 0.00 3.82
2964 4267 5.426509 ACTCATCTTCCCTTGATATGTGTGA 59.573 40.000 0.00 0.00 0.00 3.58
2965 4268 6.100859 ACTCATCTTCCCTTGATATGTGTGAT 59.899 38.462 0.00 0.00 0.00 3.06
2966 4269 6.293698 TCATCTTCCCTTGATATGTGTGATG 58.706 40.000 0.00 0.00 0.00 3.07
2967 4270 5.698741 TCTTCCCTTGATATGTGTGATGT 57.301 39.130 0.00 0.00 0.00 3.06
2968 4271 6.065976 TCTTCCCTTGATATGTGTGATGTT 57.934 37.500 0.00 0.00 0.00 2.71
2969 4272 7.194112 TCTTCCCTTGATATGTGTGATGTTA 57.806 36.000 0.00 0.00 0.00 2.41
2970 4273 7.047891 TCTTCCCTTGATATGTGTGATGTTAC 58.952 38.462 0.00 0.00 0.00 2.50
2971 4274 6.560003 TCCCTTGATATGTGTGATGTTACT 57.440 37.500 0.00 0.00 0.00 2.24
2972 4275 6.582636 TCCCTTGATATGTGTGATGTTACTC 58.417 40.000 0.00 0.00 0.00 2.59
2973 4276 6.156083 TCCCTTGATATGTGTGATGTTACTCA 59.844 38.462 0.00 0.00 0.00 3.41
2974 4277 6.994496 CCCTTGATATGTGTGATGTTACTCAT 59.006 38.462 0.00 0.00 38.11 2.90
2975 4278 8.150296 CCCTTGATATGTGTGATGTTACTCATA 58.850 37.037 0.00 0.00 39.73 2.15
2976 4279 8.982685 CCTTGATATGTGTGATGTTACTCATAC 58.017 37.037 0.00 5.35 38.84 2.39
2977 4280 9.755804 CTTGATATGTGTGATGTTACTCATACT 57.244 33.333 10.75 3.32 38.84 2.12
2983 4286 8.803397 TGTGTGATGTTACTCATACTACTAGT 57.197 34.615 0.00 0.00 37.92 2.57
2984 4287 9.895138 TGTGTGATGTTACTCATACTACTAGTA 57.105 33.333 1.89 1.89 37.92 1.82
3001 4304 9.336171 ACTACTAGTAACTAGCTATGTTACCAC 57.664 37.037 25.92 14.94 46.31 4.16
3002 4305 9.334947 CTACTAGTAACTAGCTATGTTACCACA 57.665 37.037 25.92 17.51 46.31 4.17
3003 4306 8.763984 ACTAGTAACTAGCTATGTTACCACAT 57.236 34.615 25.92 17.43 46.31 3.21
3004 4307 8.630917 ACTAGTAACTAGCTATGTTACCACATG 58.369 37.037 25.92 18.73 46.31 3.21
3005 4308 6.281405 AGTAACTAGCTATGTTACCACATGC 58.719 40.000 25.92 11.98 46.31 4.06
3006 4309 4.073293 ACTAGCTATGTTACCACATGCC 57.927 45.455 0.00 0.00 43.92 4.40
3007 4310 3.711704 ACTAGCTATGTTACCACATGCCT 59.288 43.478 0.00 0.00 43.92 4.75
3008 4311 3.199880 AGCTATGTTACCACATGCCTC 57.800 47.619 0.00 0.00 43.92 4.70
3009 4312 2.774234 AGCTATGTTACCACATGCCTCT 59.226 45.455 0.00 0.00 43.92 3.69
3010 4313 3.967326 AGCTATGTTACCACATGCCTCTA 59.033 43.478 0.00 0.00 43.92 2.43
3011 4314 4.594920 AGCTATGTTACCACATGCCTCTAT 59.405 41.667 0.00 0.00 43.92 1.98
3012 4315 5.072329 AGCTATGTTACCACATGCCTCTATT 59.928 40.000 0.00 0.00 43.92 1.73
3013 4316 5.765182 GCTATGTTACCACATGCCTCTATTT 59.235 40.000 0.00 0.00 43.92 1.40
3014 4317 6.073003 GCTATGTTACCACATGCCTCTATTTC 60.073 42.308 0.00 0.00 43.92 2.17
3015 4318 5.435686 TGTTACCACATGCCTCTATTTCT 57.564 39.130 0.00 0.00 0.00 2.52
3016 4319 5.815581 TGTTACCACATGCCTCTATTTCTT 58.184 37.500 0.00 0.00 0.00 2.52
3017 4320 5.880332 TGTTACCACATGCCTCTATTTCTTC 59.120 40.000 0.00 0.00 0.00 2.87
3018 4321 4.574674 ACCACATGCCTCTATTTCTTCA 57.425 40.909 0.00 0.00 0.00 3.02
3019 4322 5.121380 ACCACATGCCTCTATTTCTTCAT 57.879 39.130 0.00 0.00 0.00 2.57
3020 4323 5.513233 ACCACATGCCTCTATTTCTTCATT 58.487 37.500 0.00 0.00 0.00 2.57
3021 4324 5.954150 ACCACATGCCTCTATTTCTTCATTT 59.046 36.000 0.00 0.00 0.00 2.32
3022 4325 7.118723 ACCACATGCCTCTATTTCTTCATTTA 58.881 34.615 0.00 0.00 0.00 1.40
3023 4326 7.781693 ACCACATGCCTCTATTTCTTCATTTAT 59.218 33.333 0.00 0.00 0.00 1.40
3024 4327 8.636213 CCACATGCCTCTATTTCTTCATTTATT 58.364 33.333 0.00 0.00 0.00 1.40
3025 4328 9.459640 CACATGCCTCTATTTCTTCATTTATTG 57.540 33.333 0.00 0.00 0.00 1.90
3026 4329 8.139989 ACATGCCTCTATTTCTTCATTTATTGC 58.860 33.333 0.00 0.00 0.00 3.56
3027 4330 7.886629 TGCCTCTATTTCTTCATTTATTGCT 57.113 32.000 0.00 0.00 0.00 3.91
3028 4331 8.297470 TGCCTCTATTTCTTCATTTATTGCTT 57.703 30.769 0.00 0.00 0.00 3.91
3029 4332 8.192774 TGCCTCTATTTCTTCATTTATTGCTTG 58.807 33.333 0.00 0.00 0.00 4.01
3030 4333 7.168804 GCCTCTATTTCTTCATTTATTGCTTGC 59.831 37.037 0.00 0.00 0.00 4.01
3031 4334 7.650903 CCTCTATTTCTTCATTTATTGCTTGCC 59.349 37.037 0.00 0.00 0.00 4.52
3032 4335 8.065473 TCTATTTCTTCATTTATTGCTTGCCA 57.935 30.769 0.00 0.00 0.00 4.92
3033 4336 6.973229 ATTTCTTCATTTATTGCTTGCCAC 57.027 33.333 0.00 0.00 0.00 5.01
3034 4337 4.095410 TCTTCATTTATTGCTTGCCACG 57.905 40.909 0.00 0.00 0.00 4.94
3035 4338 3.505680 TCTTCATTTATTGCTTGCCACGT 59.494 39.130 0.00 0.00 0.00 4.49
3036 4339 3.485947 TCATTTATTGCTTGCCACGTC 57.514 42.857 0.00 0.00 0.00 4.34
3037 4340 2.159585 TCATTTATTGCTTGCCACGTCG 60.160 45.455 0.00 0.00 0.00 5.12
3038 4341 1.231221 TTTATTGCTTGCCACGTCGT 58.769 45.000 0.00 0.00 0.00 4.34
3039 4342 0.793861 TTATTGCTTGCCACGTCGTC 59.206 50.000 0.00 0.00 0.00 4.20
3040 4343 0.037697 TATTGCTTGCCACGTCGTCT 60.038 50.000 0.00 0.00 0.00 4.18
3041 4344 0.037697 ATTGCTTGCCACGTCGTCTA 60.038 50.000 0.00 0.00 0.00 2.59
3042 4345 0.037697 TTGCTTGCCACGTCGTCTAT 60.038 50.000 0.00 0.00 0.00 1.98
3043 4346 0.037697 TGCTTGCCACGTCGTCTATT 60.038 50.000 0.00 0.00 0.00 1.73
3044 4347 1.076332 GCTTGCCACGTCGTCTATTT 58.924 50.000 0.00 0.00 0.00 1.40
3045 4348 1.463444 GCTTGCCACGTCGTCTATTTT 59.537 47.619 0.00 0.00 0.00 1.82
3046 4349 2.669434 GCTTGCCACGTCGTCTATTTTA 59.331 45.455 0.00 0.00 0.00 1.52
3047 4350 3.308866 GCTTGCCACGTCGTCTATTTTAT 59.691 43.478 0.00 0.00 0.00 1.40
3048 4351 4.550255 GCTTGCCACGTCGTCTATTTTATC 60.550 45.833 0.00 0.00 0.00 1.75
3049 4352 4.380841 TGCCACGTCGTCTATTTTATCT 57.619 40.909 0.00 0.00 0.00 1.98
3050 4353 5.503662 TGCCACGTCGTCTATTTTATCTA 57.496 39.130 0.00 0.00 0.00 1.98
3051 4354 5.516996 TGCCACGTCGTCTATTTTATCTAG 58.483 41.667 0.00 0.00 0.00 2.43
3052 4355 5.297527 TGCCACGTCGTCTATTTTATCTAGA 59.702 40.000 0.00 0.00 0.00 2.43
3053 4356 6.016527 TGCCACGTCGTCTATTTTATCTAGAT 60.017 38.462 10.73 10.73 0.00 1.98
3054 4357 7.173735 TGCCACGTCGTCTATTTTATCTAGATA 59.826 37.037 8.44 8.44 0.00 1.98
3055 4358 8.182881 GCCACGTCGTCTATTTTATCTAGATAT 58.817 37.037 13.22 2.69 0.00 1.63
3056 4359 9.491934 CCACGTCGTCTATTTTATCTAGATATG 57.508 37.037 13.22 4.14 0.00 1.78
3072 4375 8.405418 TCTAGATATGTGTGATGTTACTACCC 57.595 38.462 0.00 0.00 0.00 3.69
3073 4376 8.002459 TCTAGATATGTGTGATGTTACTACCCA 58.998 37.037 0.00 0.00 0.00 4.51
3074 4377 7.618019 AGATATGTGTGATGTTACTACCCAT 57.382 36.000 0.00 0.00 0.00 4.00
3075 4378 7.445121 AGATATGTGTGATGTTACTACCCATG 58.555 38.462 0.00 0.00 0.00 3.66
3076 4379 4.901197 TGTGTGATGTTACTACCCATGT 57.099 40.909 0.00 0.00 0.00 3.21
3077 4380 5.235850 TGTGTGATGTTACTACCCATGTT 57.764 39.130 0.00 0.00 0.00 2.71
3078 4381 6.361768 TGTGTGATGTTACTACCCATGTTA 57.638 37.500 0.00 0.00 0.00 2.41
3079 4382 6.167685 TGTGTGATGTTACTACCCATGTTAC 58.832 40.000 0.00 0.00 0.00 2.50
3080 4383 6.014070 TGTGTGATGTTACTACCCATGTTACT 60.014 38.462 0.00 0.00 0.00 2.24
3081 4384 6.534079 GTGTGATGTTACTACCCATGTTACTC 59.466 42.308 0.00 0.00 0.00 2.59
3082 4385 6.047231 GTGATGTTACTACCCATGTTACTCC 58.953 44.000 0.00 0.00 0.00 3.85
3083 4386 5.129815 TGATGTTACTACCCATGTTACTCCC 59.870 44.000 0.00 0.00 0.00 4.30
3084 4387 3.776417 TGTTACTACCCATGTTACTCCCC 59.224 47.826 0.00 0.00 0.00 4.81
3085 4388 1.889174 ACTACCCATGTTACTCCCCC 58.111 55.000 0.00 0.00 0.00 5.40
3086 4389 1.368558 ACTACCCATGTTACTCCCCCT 59.631 52.381 0.00 0.00 0.00 4.79
3087 4390 1.768870 CTACCCATGTTACTCCCCCTG 59.231 57.143 0.00 0.00 0.00 4.45
3088 4391 0.178843 ACCCATGTTACTCCCCCTGT 60.179 55.000 0.00 0.00 0.00 4.00
3089 4392 0.255890 CCCATGTTACTCCCCCTGTG 59.744 60.000 0.00 0.00 0.00 3.66
3090 4393 0.255890 CCATGTTACTCCCCCTGTGG 59.744 60.000 0.00 0.00 0.00 4.17
3186 4491 5.771165 TGGAGGGGTTTACATTTGTTTCTAC 59.229 40.000 0.00 0.00 0.00 2.59
3784 5143 3.838244 TGGAAACACACTTCAGTAGCT 57.162 42.857 0.00 0.00 33.40 3.32
3785 5144 4.948341 TGGAAACACACTTCAGTAGCTA 57.052 40.909 0.00 0.00 33.40 3.32
3786 5145 4.628074 TGGAAACACACTTCAGTAGCTAC 58.372 43.478 16.43 16.43 33.40 3.58
3787 5146 4.100344 TGGAAACACACTTCAGTAGCTACA 59.900 41.667 25.28 3.04 33.40 2.74
3788 5147 5.221641 TGGAAACACACTTCAGTAGCTACAT 60.222 40.000 25.28 8.21 33.40 2.29
3789 5148 6.014925 TGGAAACACACTTCAGTAGCTACATA 60.015 38.462 25.28 10.17 33.40 2.29
3842 5201 5.829391 TGATCAATGTATGGGAAGGAATGTG 59.171 40.000 0.00 0.00 0.00 3.21
3851 5210 2.224769 GGGAAGGAATGTGGACTGTTCA 60.225 50.000 0.00 0.00 0.00 3.18
3881 5259 1.349688 ACCGACTTTTGGGCTGTCATA 59.650 47.619 0.00 0.00 0.00 2.15
3910 5290 5.351233 TGTACGTTGCTGGAGTATTTTTG 57.649 39.130 0.00 0.00 0.00 2.44
3918 5298 7.361713 CGTTGCTGGAGTATTTTTGGAATAAGA 60.362 37.037 0.00 0.00 0.00 2.10
3920 5300 8.225603 TGCTGGAGTATTTTTGGAATAAGATC 57.774 34.615 0.00 0.00 0.00 2.75
4178 5598 1.774254 TGTTCCCACAACATCCAGACT 59.226 47.619 0.00 0.00 0.00 3.24
4185 5605 3.251729 CCACAACATCCAGACTTTGACAG 59.748 47.826 0.00 0.00 0.00 3.51
4251 5672 4.033243 GCAAACTTTGGCAAAACAGAAGAG 59.967 41.667 14.43 1.91 0.00 2.85
4257 5678 6.547510 ACTTTGGCAAAACAGAAGAGAATACT 59.452 34.615 14.43 0.00 0.00 2.12
4258 5679 6.560253 TTGGCAAAACAGAAGAGAATACTC 57.440 37.500 0.00 0.00 42.90 2.59
4259 5680 5.003804 TGGCAAAACAGAAGAGAATACTCC 58.996 41.667 0.00 0.00 43.53 3.85
4260 5681 4.396478 GGCAAAACAGAAGAGAATACTCCC 59.604 45.833 0.00 0.00 43.53 4.30
4261 5682 5.249420 GCAAAACAGAAGAGAATACTCCCT 58.751 41.667 0.00 0.00 43.53 4.20
4262 5683 5.352846 GCAAAACAGAAGAGAATACTCCCTC 59.647 44.000 0.00 0.00 43.53 4.30
4263 5684 5.685520 AAACAGAAGAGAATACTCCCTCC 57.314 43.478 0.00 0.00 43.53 4.30
4264 5685 3.292460 ACAGAAGAGAATACTCCCTCCG 58.708 50.000 0.00 0.00 43.53 4.63
4265 5686 3.292460 CAGAAGAGAATACTCCCTCCGT 58.708 50.000 0.00 0.00 43.53 4.69
4266 5687 3.702045 CAGAAGAGAATACTCCCTCCGTT 59.298 47.826 0.00 0.00 43.53 4.44
4267 5688 4.160626 CAGAAGAGAATACTCCCTCCGTTT 59.839 45.833 0.00 0.00 43.53 3.60
4268 5689 4.403113 AGAAGAGAATACTCCCTCCGTTTC 59.597 45.833 0.00 0.00 43.53 2.78
4269 5690 3.983821 AGAGAATACTCCCTCCGTTTCT 58.016 45.455 0.00 0.00 43.53 2.52
4270 5691 4.354662 AGAGAATACTCCCTCCGTTTCTT 58.645 43.478 0.00 0.00 43.53 2.52
4271 5692 4.778427 AGAGAATACTCCCTCCGTTTCTTT 59.222 41.667 0.00 0.00 43.53 2.52
4272 5693 5.248705 AGAGAATACTCCCTCCGTTTCTTTT 59.751 40.000 0.00 0.00 43.53 2.27
4273 5694 5.877491 AGAATACTCCCTCCGTTTCTTTTT 58.123 37.500 0.00 0.00 0.00 1.94
4274 5695 7.012661 AGAATACTCCCTCCGTTTCTTTTTA 57.987 36.000 0.00 0.00 0.00 1.52
4275 5696 7.104290 AGAATACTCCCTCCGTTTCTTTTTAG 58.896 38.462 0.00 0.00 0.00 1.85
4276 5697 4.701651 ACTCCCTCCGTTTCTTTTTAGT 57.298 40.909 0.00 0.00 0.00 2.24
4277 5698 5.045012 ACTCCCTCCGTTTCTTTTTAGTT 57.955 39.130 0.00 0.00 0.00 2.24
4278 5699 5.443283 ACTCCCTCCGTTTCTTTTTAGTTT 58.557 37.500 0.00 0.00 0.00 2.66
4279 5700 5.298527 ACTCCCTCCGTTTCTTTTTAGTTTG 59.701 40.000 0.00 0.00 0.00 2.93
4280 5701 4.037089 TCCCTCCGTTTCTTTTTAGTTTGC 59.963 41.667 0.00 0.00 0.00 3.68
4281 5702 4.202070 CCCTCCGTTTCTTTTTAGTTTGCA 60.202 41.667 0.00 0.00 0.00 4.08
4282 5703 5.508994 CCCTCCGTTTCTTTTTAGTTTGCAT 60.509 40.000 0.00 0.00 0.00 3.96
4283 5704 6.294286 CCCTCCGTTTCTTTTTAGTTTGCATA 60.294 38.462 0.00 0.00 0.00 3.14
4284 5705 7.312899 CCTCCGTTTCTTTTTAGTTTGCATAT 58.687 34.615 0.00 0.00 0.00 1.78
4285 5706 8.455682 CCTCCGTTTCTTTTTAGTTTGCATATA 58.544 33.333 0.00 0.00 0.00 0.86
4286 5707 9.834628 CTCCGTTTCTTTTTAGTTTGCATATAA 57.165 29.630 0.00 0.00 0.00 0.98
4287 5708 9.834628 TCCGTTTCTTTTTAGTTTGCATATAAG 57.165 29.630 0.00 0.00 0.00 1.73
4288 5709 9.834628 CCGTTTCTTTTTAGTTTGCATATAAGA 57.165 29.630 0.00 0.00 0.00 2.10
4300 5721 8.806146 AGTTTGCATATAAGATTTGGTCAAAGT 58.194 29.630 2.55 0.00 33.32 2.66
4301 5722 9.076596 GTTTGCATATAAGATTTGGTCAAAGTC 57.923 33.333 2.55 1.51 33.32 3.01
4302 5723 7.936496 TGCATATAAGATTTGGTCAAAGTCA 57.064 32.000 2.55 0.00 33.32 3.41
4303 5724 8.347004 TGCATATAAGATTTGGTCAAAGTCAA 57.653 30.769 2.55 0.00 33.32 3.18
4304 5725 8.801299 TGCATATAAGATTTGGTCAAAGTCAAA 58.199 29.630 2.55 0.00 37.29 2.69
4305 5726 9.076596 GCATATAAGATTTGGTCAAAGTCAAAC 57.923 33.333 2.55 0.00 35.97 2.93
4308 5729 6.530019 AAGATTTGGTCAAAGTCAAACACT 57.470 33.333 2.55 0.00 35.97 3.55
4309 5730 5.894807 AGATTTGGTCAAAGTCAAACACTG 58.105 37.500 2.55 0.00 35.97 3.66
4310 5731 5.418840 AGATTTGGTCAAAGTCAAACACTGT 59.581 36.000 2.55 0.00 35.97 3.55
4311 5732 6.601613 AGATTTGGTCAAAGTCAAACACTGTA 59.398 34.615 2.55 0.00 35.97 2.74
4312 5733 6.576662 TTTGGTCAAAGTCAAACACTGTAA 57.423 33.333 0.00 0.00 34.56 2.41
4313 5734 6.576662 TTGGTCAAAGTCAAACACTGTAAA 57.423 33.333 0.00 0.00 34.56 2.01
4314 5735 6.576662 TGGTCAAAGTCAAACACTGTAAAA 57.423 33.333 0.00 0.00 34.56 1.52
4315 5736 7.164230 TGGTCAAAGTCAAACACTGTAAAAT 57.836 32.000 0.00 0.00 34.56 1.82
4316 5737 7.607250 TGGTCAAAGTCAAACACTGTAAAATT 58.393 30.769 0.00 0.00 34.56 1.82
4317 5738 8.091449 TGGTCAAAGTCAAACACTGTAAAATTT 58.909 29.630 0.00 0.00 34.56 1.82
4318 5739 8.379902 GGTCAAAGTCAAACACTGTAAAATTTG 58.620 33.333 0.00 0.00 34.56 2.32
4319 5740 9.134734 GTCAAAGTCAAACACTGTAAAATTTGA 57.865 29.630 0.00 8.64 38.42 2.69
4325 5746 8.220755 TCAAACACTGTAAAATTTGACTAGCT 57.779 30.769 7.22 0.00 36.42 3.32
4326 5747 8.682710 TCAAACACTGTAAAATTTGACTAGCTT 58.317 29.630 7.22 0.00 36.42 3.74
4327 5748 9.301153 CAAACACTGTAAAATTTGACTAGCTTT 57.699 29.630 7.22 2.89 34.62 3.51
4328 5749 8.856490 AACACTGTAAAATTTGACTAGCTTTG 57.144 30.769 7.22 1.65 0.00 2.77
4329 5750 7.996385 ACACTGTAAAATTTGACTAGCTTTGT 58.004 30.769 7.22 0.00 0.00 2.83
4330 5751 9.116067 ACACTGTAAAATTTGACTAGCTTTGTA 57.884 29.630 7.22 0.00 0.00 2.41
4331 5752 9.599322 CACTGTAAAATTTGACTAGCTTTGTAG 57.401 33.333 7.22 0.00 0.00 2.74
4348 5769 8.693542 GCTTTGTAGCAAAAGATATCAACAAT 57.306 30.769 5.32 0.00 46.95 2.71
4349 5770 8.589629 GCTTTGTAGCAAAAGATATCAACAATG 58.410 33.333 5.32 6.99 46.95 2.82
4350 5771 9.844790 CTTTGTAGCAAAAGATATCAACAATGA 57.155 29.630 5.32 0.00 39.12 2.57
4351 5772 9.624697 TTTGTAGCAAAAGATATCAACAATGAC 57.375 29.630 5.32 0.00 38.69 3.06
4352 5773 8.334263 TGTAGCAAAAGATATCAACAATGACA 57.666 30.769 5.32 0.00 38.69 3.58
4353 5774 8.236586 TGTAGCAAAAGATATCAACAATGACAC 58.763 33.333 5.32 0.30 38.69 3.67
4354 5775 7.458409 AGCAAAAGATATCAACAATGACACT 57.542 32.000 5.32 0.00 38.69 3.55
4355 5776 8.565896 AGCAAAAGATATCAACAATGACACTA 57.434 30.769 5.32 0.00 38.69 2.74
4356 5777 9.182214 AGCAAAAGATATCAACAATGACACTAT 57.818 29.630 5.32 0.00 38.69 2.12
4357 5778 9.229784 GCAAAAGATATCAACAATGACACTATG 57.770 33.333 5.32 0.00 38.69 2.23
4401 5822 9.708092 TGCATGATGAAATAAATTTTCAGAACA 57.292 25.926 0.00 7.15 41.13 3.18
4476 5897 9.301153 CAAATACTTTGACCAAACCTTATATGC 57.699 33.333 0.00 0.00 43.26 3.14
4477 5898 5.560966 ACTTTGACCAAACCTTATATGCG 57.439 39.130 0.00 0.00 0.00 4.73
4478 5899 4.398044 ACTTTGACCAAACCTTATATGCGG 59.602 41.667 0.00 0.00 0.00 5.69
4479 5900 3.916359 TGACCAAACCTTATATGCGGA 57.084 42.857 0.00 0.00 0.00 5.54
4480 5901 3.804036 TGACCAAACCTTATATGCGGAG 58.196 45.455 0.00 0.00 0.00 4.63
4481 5902 3.199071 TGACCAAACCTTATATGCGGAGT 59.801 43.478 0.00 0.00 0.00 3.85
4482 5903 4.406326 TGACCAAACCTTATATGCGGAGTA 59.594 41.667 0.00 0.00 0.00 2.59
4483 5904 5.104859 TGACCAAACCTTATATGCGGAGTAA 60.105 40.000 0.00 0.00 0.00 2.24
4484 5905 5.747342 ACCAAACCTTATATGCGGAGTAAA 58.253 37.500 0.00 0.00 0.00 2.01
4485 5906 6.181908 ACCAAACCTTATATGCGGAGTAAAA 58.818 36.000 0.00 0.00 0.00 1.52
4486 5907 6.660094 ACCAAACCTTATATGCGGAGTAAAAA 59.340 34.615 0.00 0.00 0.00 1.94
4487 5908 7.148137 ACCAAACCTTATATGCGGAGTAAAAAG 60.148 37.037 0.00 0.00 0.00 2.27
4488 5909 7.066525 CCAAACCTTATATGCGGAGTAAAAAGA 59.933 37.037 0.00 0.00 0.00 2.52
4489 5910 8.455682 CAAACCTTATATGCGGAGTAAAAAGAA 58.544 33.333 0.00 0.00 0.00 2.52
4490 5911 8.570068 AACCTTATATGCGGAGTAAAAAGAAA 57.430 30.769 0.00 0.00 0.00 2.52
4491 5912 7.982224 ACCTTATATGCGGAGTAAAAAGAAAC 58.018 34.615 0.00 0.00 0.00 2.78
4492 5913 7.123830 CCTTATATGCGGAGTAAAAAGAAACG 58.876 38.462 0.00 0.00 0.00 3.60
4493 5914 3.824414 ATGCGGAGTAAAAAGAAACGG 57.176 42.857 0.00 0.00 0.00 4.44
4494 5915 2.836262 TGCGGAGTAAAAAGAAACGGA 58.164 42.857 0.00 0.00 0.00 4.69
4495 5916 2.803956 TGCGGAGTAAAAAGAAACGGAG 59.196 45.455 0.00 0.00 0.00 4.63
4496 5917 2.159037 GCGGAGTAAAAAGAAACGGAGG 59.841 50.000 0.00 0.00 0.00 4.30
4497 5918 2.740447 CGGAGTAAAAAGAAACGGAGGG 59.260 50.000 0.00 0.00 0.00 4.30
4498 5919 3.555586 CGGAGTAAAAAGAAACGGAGGGA 60.556 47.826 0.00 0.00 0.00 4.20
4499 5920 4.001652 GGAGTAAAAAGAAACGGAGGGAG 58.998 47.826 0.00 0.00 0.00 4.30
4500 5921 4.504514 GGAGTAAAAAGAAACGGAGGGAGT 60.505 45.833 0.00 0.00 0.00 3.85
4501 5922 5.279657 GGAGTAAAAAGAAACGGAGGGAGTA 60.280 44.000 0.00 0.00 0.00 2.59
4502 5923 5.545588 AGTAAAAAGAAACGGAGGGAGTAC 58.454 41.667 0.00 0.00 0.00 2.73
4528 5949 2.764314 GGACATGTGGGCGTCATGC 61.764 63.158 1.15 11.06 44.26 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.616330 CGGGTGACGTTGCAATGCT 61.616 57.895 18.61 6.04 37.93 3.79
38 39 0.393808 TAGTTGGCGGCCTCCATTTC 60.394 55.000 16.96 9.48 35.77 2.17
40 41 1.224592 CTAGTTGGCGGCCTCCATT 59.775 57.895 16.96 9.87 35.77 3.16
46 47 2.512515 CAGCTCTAGTTGGCGGCC 60.513 66.667 13.32 13.32 0.00 6.13
50 51 3.990318 AAACAAACAGCTCTAGTTGGC 57.010 42.857 0.00 0.00 0.00 4.52
95 96 5.069251 AGACCCCTTCATAAGTCGTCATAAG 59.931 44.000 0.00 0.00 34.41 1.73
98 99 3.375699 AGACCCCTTCATAAGTCGTCAT 58.624 45.455 0.00 0.00 34.41 3.06
99 100 2.816411 AGACCCCTTCATAAGTCGTCA 58.184 47.619 0.00 0.00 34.41 4.35
102 103 2.678336 GCAAAGACCCCTTCATAAGTCG 59.322 50.000 0.00 0.00 34.41 4.18
106 107 2.446435 GCAGCAAAGACCCCTTCATAA 58.554 47.619 0.00 0.00 0.00 1.90
117 122 0.532573 CCTAGGTCTCGCAGCAAAGA 59.467 55.000 0.00 0.00 0.00 2.52
127 132 3.131400 AGCTCGACAAATTCCTAGGTCTC 59.869 47.826 9.08 0.00 0.00 3.36
146 151 2.457759 GGCTTATCAGGGCCTAGCT 58.542 57.895 21.95 6.47 44.48 3.32
154 159 1.140312 TTAGGGCCAGGCTTATCAGG 58.860 55.000 12.43 0.00 0.00 3.86
165 170 3.158648 CCCGGATCGTTAGGGCCA 61.159 66.667 6.18 0.00 38.51 5.36
172 177 4.419921 GGTTGGGCCCGGATCGTT 62.420 66.667 19.37 0.00 0.00 3.85
356 377 0.935366 GCTCGAAAGCCCGATAGACG 60.935 60.000 0.00 0.00 43.10 4.18
415 441 7.910162 CCATAGATTCGAAAAATGTGGTTGTAG 59.090 37.037 0.00 0.00 0.00 2.74
442 469 0.777446 TAGCAGCTGGGTCCCTTTTT 59.223 50.000 17.12 0.00 0.00 1.94
519 551 6.725246 ACTTTGATTCACGACCAAAACTTAG 58.275 36.000 0.00 0.00 30.56 2.18
531 563 5.862924 ATCAACAGGTACTTTGATTCACG 57.137 39.130 10.35 0.00 40.49 4.35
547 579 6.310941 TCACCTTTTGAGGGAAATATCAACA 58.689 36.000 0.00 0.00 35.25 3.33
562 594 8.469309 ACTTCCATGGATATTATCACCTTTTG 57.531 34.615 17.06 0.00 0.00 2.44
591 626 4.623932 ATGCGAGATAGGGAGCATAAAA 57.376 40.909 0.00 0.00 46.93 1.52
676 890 2.229543 ACACCGCATACGAACACTCTAA 59.770 45.455 0.00 0.00 43.93 2.10
748 973 0.546122 TGTGCGCTCCCAAGGATAAT 59.454 50.000 9.73 0.00 0.00 1.28
755 980 1.965930 GATGTGTGTGCGCTCCCAA 60.966 57.895 9.73 0.00 0.00 4.12
760 985 2.669569 GGGTGATGTGTGTGCGCT 60.670 61.111 9.73 0.00 0.00 5.92
772 997 1.987855 GGACGGGACAGATGGGTGA 60.988 63.158 0.00 0.00 0.00 4.02
1068 1356 1.007238 TCCTTCCTCTCCACTACCCTG 59.993 57.143 0.00 0.00 0.00 4.45
1235 1528 3.835395 AGAAGCAGCTAACTAAGTGTCCT 59.165 43.478 0.00 0.00 0.00 3.85
1304 1649 3.007635 CAAACCCTCCCGACTAAATGAC 58.992 50.000 0.00 0.00 0.00 3.06
1307 1652 3.181437 ACAACAAACCCTCCCGACTAAAT 60.181 43.478 0.00 0.00 0.00 1.40
1435 1901 4.158764 ACGATATTTCATTCCCCGCAAAAA 59.841 37.500 0.00 0.00 0.00 1.94
1436 1902 3.697045 ACGATATTTCATTCCCCGCAAAA 59.303 39.130 0.00 0.00 0.00 2.44
1437 1903 3.283751 ACGATATTTCATTCCCCGCAAA 58.716 40.909 0.00 0.00 0.00 3.68
1438 1904 2.925724 ACGATATTTCATTCCCCGCAA 58.074 42.857 0.00 0.00 0.00 4.85
1439 1905 2.631160 ACGATATTTCATTCCCCGCA 57.369 45.000 0.00 0.00 0.00 5.69
1440 1906 4.693566 TGATTACGATATTTCATTCCCCGC 59.306 41.667 0.00 0.00 0.00 6.13
1441 1907 6.599437 GTTGATTACGATATTTCATTCCCCG 58.401 40.000 0.00 0.00 0.00 5.73
1516 1996 5.860182 CAGTTCATAAGGAAAGCAACACATG 59.140 40.000 0.00 0.00 37.23 3.21
1532 2012 4.087510 CGTTCCTACGTCACAGTTCATA 57.912 45.455 0.00 0.00 42.72 2.15
1642 2158 7.673180 ACTAGTACTATTTTGTACACCTGCAA 58.327 34.615 2.33 0.00 43.65 4.08
1644 2160 9.813446 ATTACTAGTACTATTTTGTACACCTGC 57.187 33.333 0.91 0.00 43.65 4.85
1682 2318 6.771573 TCGAGGTGGGAACTTTAGAAATTTA 58.228 36.000 0.00 0.00 0.00 1.40
1697 2333 4.455877 GCCAGAAAAATATATCGAGGTGGG 59.544 45.833 0.00 0.00 0.00 4.61
1698 2334 5.063204 TGCCAGAAAAATATATCGAGGTGG 58.937 41.667 0.00 0.00 0.00 4.61
1790 2431 2.535331 TCGCAAGCTTGGAACAAAAAC 58.465 42.857 27.10 6.71 40.75 2.43
1908 2549 0.978907 AAGACCCCGTACGTCCATTT 59.021 50.000 15.21 0.24 0.00 2.32
1910 2551 1.684983 CATAAGACCCCGTACGTCCAT 59.315 52.381 15.21 0.00 0.00 3.41
1970 2611 3.131396 CAACTAATATGGGACGGAGCAC 58.869 50.000 0.00 0.00 0.00 4.40
1971 2612 2.769663 ACAACTAATATGGGACGGAGCA 59.230 45.455 0.00 0.00 0.00 4.26
2037 2678 4.275689 CCATATTAGTTGCCGCTGAAATGA 59.724 41.667 0.00 0.00 0.00 2.57
2048 2689 3.391296 TCCCTCTGTCCCATATTAGTTGC 59.609 47.826 0.00 0.00 0.00 4.17
2193 3484 3.812262 TCCTGAATATGCACATGACCAG 58.188 45.455 0.00 0.00 0.00 4.00
2224 3515 9.950496 TTGATAATGGAAGAGCTATATTTCCTC 57.050 33.333 15.60 8.49 40.77 3.71
2349 3651 2.520069 AGCTGGGTCATCGTATCCTAG 58.480 52.381 0.00 0.00 33.84 3.02
2581 3883 2.094957 TGCTCGTATCATCGTGTTGACA 60.095 45.455 0.00 0.00 0.00 3.58
2809 4112 4.838986 TCCCCATTCTGGCTAGTCTTATAC 59.161 45.833 0.00 0.00 35.79 1.47
2814 4117 1.008938 ACTCCCCATTCTGGCTAGTCT 59.991 52.381 0.00 0.00 35.79 3.24
2815 4118 1.501582 ACTCCCCATTCTGGCTAGTC 58.498 55.000 0.00 0.00 35.79 2.59
2816 4119 2.772515 GTTACTCCCCATTCTGGCTAGT 59.227 50.000 0.00 4.66 35.79 2.57
2817 4120 3.041946 AGTTACTCCCCATTCTGGCTAG 58.958 50.000 0.00 0.00 35.79 3.42
2818 4121 3.130734 AGTTACTCCCCATTCTGGCTA 57.869 47.619 0.00 0.00 35.79 3.93
2819 4122 1.972588 AGTTACTCCCCATTCTGGCT 58.027 50.000 0.00 0.00 35.79 4.75
2820 4123 2.808906 AAGTTACTCCCCATTCTGGC 57.191 50.000 0.00 0.00 35.79 4.85
2821 4124 4.717280 AGTCTAAGTTACTCCCCATTCTGG 59.283 45.833 0.00 0.00 37.25 3.86
2822 4125 5.941555 AGTCTAAGTTACTCCCCATTCTG 57.058 43.478 0.00 0.00 0.00 3.02
2823 4126 6.743788 ACTAGTCTAAGTTACTCCCCATTCT 58.256 40.000 0.00 0.00 0.00 2.40
2824 4127 8.412456 GTTACTAGTCTAAGTTACTCCCCATTC 58.588 40.741 0.00 0.00 0.00 2.67
2825 4128 7.897565 TGTTACTAGTCTAAGTTACTCCCCATT 59.102 37.037 0.00 0.00 31.82 3.16
2826 4129 7.416731 TGTTACTAGTCTAAGTTACTCCCCAT 58.583 38.462 0.00 0.00 31.82 4.00
2827 4130 6.793478 TGTTACTAGTCTAAGTTACTCCCCA 58.207 40.000 0.00 0.00 31.82 4.96
2828 4131 7.683945 GCATGTTACTAGTCTAAGTTACTCCCC 60.684 44.444 0.00 0.00 31.82 4.81
2829 4132 7.201835 GCATGTTACTAGTCTAAGTTACTCCC 58.798 42.308 0.00 0.00 31.82 4.30
2830 4133 7.068470 AGGCATGTTACTAGTCTAAGTTACTCC 59.932 40.741 0.00 0.00 31.82 3.85
2831 4134 7.998580 AGGCATGTTACTAGTCTAAGTTACTC 58.001 38.462 0.00 0.00 31.82 2.59
2832 4135 7.957992 AGGCATGTTACTAGTCTAAGTTACT 57.042 36.000 0.00 0.00 31.82 2.24
2833 4136 9.680315 CATAGGCATGTTACTAGTCTAAGTTAC 57.320 37.037 0.00 0.00 31.32 2.50
2834 4137 9.417561 ACATAGGCATGTTACTAGTCTAAGTTA 57.582 33.333 0.00 0.00 42.98 2.24
2835 4138 8.307582 ACATAGGCATGTTACTAGTCTAAGTT 57.692 34.615 0.00 0.00 42.98 2.66
2836 4139 7.899648 ACATAGGCATGTTACTAGTCTAAGT 57.100 36.000 0.00 0.00 42.98 2.24
2850 4153 9.627395 GTAACATAGACTAGTAACATAGGCATG 57.373 37.037 0.00 0.00 32.77 4.06
2851 4154 9.589461 AGTAACATAGACTAGTAACATAGGCAT 57.411 33.333 0.00 0.00 32.77 4.40
2852 4155 8.991783 AGTAACATAGACTAGTAACATAGGCA 57.008 34.615 0.00 0.00 32.77 4.75
2865 4168 8.384718 CCCACTATAGAGGTAGTAACATAGACT 58.615 40.741 14.29 0.00 33.29 3.24
2866 4169 8.381636 TCCCACTATAGAGGTAGTAACATAGAC 58.618 40.741 14.29 0.00 33.29 2.59
2867 4170 8.515927 TCCCACTATAGAGGTAGTAACATAGA 57.484 38.462 14.29 0.00 33.29 1.98
2868 4171 9.233649 CTTCCCACTATAGAGGTAGTAACATAG 57.766 40.741 14.29 0.00 33.29 2.23
2869 4172 8.730948 ACTTCCCACTATAGAGGTAGTAACATA 58.269 37.037 17.73 0.00 33.29 2.29
2870 4173 7.593653 ACTTCCCACTATAGAGGTAGTAACAT 58.406 38.462 17.73 1.67 33.29 2.71
2871 4174 6.978261 ACTTCCCACTATAGAGGTAGTAACA 58.022 40.000 17.73 0.00 33.29 2.41
2872 4175 8.845227 GTTACTTCCCACTATAGAGGTAGTAAC 58.155 40.741 31.13 31.13 40.31 2.50
2873 4176 8.560039 TGTTACTTCCCACTATAGAGGTAGTAA 58.440 37.037 24.67 24.67 33.29 2.24
2874 4177 8.106017 TGTTACTTCCCACTATAGAGGTAGTA 57.894 38.462 19.39 19.39 33.29 1.82
2875 4178 6.978261 TGTTACTTCCCACTATAGAGGTAGT 58.022 40.000 20.74 20.74 35.34 2.73
2876 4179 9.756571 ATATGTTACTTCCCACTATAGAGGTAG 57.243 37.037 14.29 14.29 0.00 3.18
2886 4189 9.998106 GTTATCACATATATGTTACTTCCCACT 57.002 33.333 15.85 0.00 39.39 4.00
2887 4190 9.772973 TGTTATCACATATATGTTACTTCCCAC 57.227 33.333 15.85 5.91 39.39 4.61
2896 4199 9.123902 AGTGTTGCATGTTATCACATATATGTT 57.876 29.630 15.85 5.50 42.14 2.71
2897 4200 8.681486 AGTGTTGCATGTTATCACATATATGT 57.319 30.769 12.75 12.75 42.14 2.29
2898 4201 9.603298 GAAGTGTTGCATGTTATCACATATATG 57.397 33.333 11.29 11.29 42.14 1.78
2899 4202 9.341078 TGAAGTGTTGCATGTTATCACATATAT 57.659 29.630 12.61 0.00 42.14 0.86
2900 4203 8.729805 TGAAGTGTTGCATGTTATCACATATA 57.270 30.769 12.61 0.00 42.14 0.86
2901 4204 7.628769 TGAAGTGTTGCATGTTATCACATAT 57.371 32.000 12.61 3.08 42.14 1.78
2902 4205 7.628769 ATGAAGTGTTGCATGTTATCACATA 57.371 32.000 12.61 3.36 42.14 2.29
2903 4206 5.963176 TGAAGTGTTGCATGTTATCACAT 57.037 34.783 12.61 0.00 45.18 3.21
2904 4207 5.963176 ATGAAGTGTTGCATGTTATCACA 57.037 34.783 12.61 0.00 37.31 3.58
2905 4208 8.915871 ATAAATGAAGTGTTGCATGTTATCAC 57.084 30.769 0.00 0.30 0.00 3.06
2909 4212 9.019656 ACCTAATAAATGAAGTGTTGCATGTTA 57.980 29.630 0.00 0.00 0.00 2.41
2910 4213 7.895759 ACCTAATAAATGAAGTGTTGCATGTT 58.104 30.769 0.00 0.00 0.00 2.71
2911 4214 7.466746 ACCTAATAAATGAAGTGTTGCATGT 57.533 32.000 0.00 0.00 0.00 3.21
2928 4231 9.535170 CAAGGGAAGATGAGTCTATACCTAATA 57.465 37.037 0.00 0.00 33.44 0.98
2929 4232 8.235230 TCAAGGGAAGATGAGTCTATACCTAAT 58.765 37.037 0.00 0.00 33.44 1.73
2930 4233 7.592736 TCAAGGGAAGATGAGTCTATACCTAA 58.407 38.462 0.00 0.00 33.44 2.69
2931 4234 7.162973 TCAAGGGAAGATGAGTCTATACCTA 57.837 40.000 0.00 0.00 33.44 3.08
2932 4235 6.031964 TCAAGGGAAGATGAGTCTATACCT 57.968 41.667 0.00 0.00 35.02 3.08
2933 4236 6.926630 ATCAAGGGAAGATGAGTCTATACC 57.073 41.667 0.00 0.00 33.30 2.73
2934 4237 9.030452 ACATATCAAGGGAAGATGAGTCTATAC 57.970 37.037 0.00 0.00 33.30 1.47
2935 4238 9.029368 CACATATCAAGGGAAGATGAGTCTATA 57.971 37.037 0.00 0.00 33.30 1.31
2936 4239 7.512058 ACACATATCAAGGGAAGATGAGTCTAT 59.488 37.037 0.00 0.00 33.30 1.98
2937 4240 6.841229 ACACATATCAAGGGAAGATGAGTCTA 59.159 38.462 0.00 0.00 33.30 2.59
2938 4241 5.664908 ACACATATCAAGGGAAGATGAGTCT 59.335 40.000 0.00 0.00 35.82 3.24
2939 4242 5.757320 CACACATATCAAGGGAAGATGAGTC 59.243 44.000 0.00 0.00 28.67 3.36
2940 4243 5.426509 TCACACATATCAAGGGAAGATGAGT 59.573 40.000 0.00 0.00 30.11 3.41
2941 4244 5.922053 TCACACATATCAAGGGAAGATGAG 58.078 41.667 0.00 0.00 0.00 2.90
2942 4245 5.955961 TCACACATATCAAGGGAAGATGA 57.044 39.130 0.00 0.00 0.00 2.92
2943 4246 6.060136 ACATCACACATATCAAGGGAAGATG 58.940 40.000 0.00 0.00 36.24 2.90
2944 4247 6.257994 ACATCACACATATCAAGGGAAGAT 57.742 37.500 0.00 0.00 0.00 2.40
2945 4248 5.698741 ACATCACACATATCAAGGGAAGA 57.301 39.130 0.00 0.00 0.00 2.87
2946 4249 7.050377 AGTAACATCACACATATCAAGGGAAG 58.950 38.462 0.00 0.00 0.00 3.46
2947 4250 6.957631 AGTAACATCACACATATCAAGGGAA 58.042 36.000 0.00 0.00 0.00 3.97
2948 4251 6.156083 TGAGTAACATCACACATATCAAGGGA 59.844 38.462 0.00 0.00 0.00 4.20
2949 4252 6.348498 TGAGTAACATCACACATATCAAGGG 58.652 40.000 0.00 0.00 0.00 3.95
2950 4253 8.982685 GTATGAGTAACATCACACATATCAAGG 58.017 37.037 0.00 0.00 40.07 3.61
2951 4254 9.755804 AGTATGAGTAACATCACACATATCAAG 57.244 33.333 0.00 0.00 40.07 3.02
2957 4260 9.409918 ACTAGTAGTATGAGTAACATCACACAT 57.590 33.333 0.00 0.00 40.07 3.21
2958 4261 8.803397 ACTAGTAGTATGAGTAACATCACACA 57.197 34.615 0.00 0.00 40.07 3.72
2994 4297 5.880332 TGAAGAAATAGAGGCATGTGGTAAC 59.120 40.000 0.00 0.00 0.00 2.50
2995 4298 6.061022 TGAAGAAATAGAGGCATGTGGTAA 57.939 37.500 0.00 0.00 0.00 2.85
2996 4299 5.692115 TGAAGAAATAGAGGCATGTGGTA 57.308 39.130 0.00 0.00 0.00 3.25
2997 4300 4.574674 TGAAGAAATAGAGGCATGTGGT 57.425 40.909 0.00 0.00 0.00 4.16
2998 4301 6.461110 AAATGAAGAAATAGAGGCATGTGG 57.539 37.500 0.00 0.00 0.00 4.17
2999 4302 9.459640 CAATAAATGAAGAAATAGAGGCATGTG 57.540 33.333 0.00 0.00 0.00 3.21
3000 4303 8.139989 GCAATAAATGAAGAAATAGAGGCATGT 58.860 33.333 0.00 0.00 0.00 3.21
3001 4304 8.358148 AGCAATAAATGAAGAAATAGAGGCATG 58.642 33.333 0.00 0.00 0.00 4.06
3002 4305 8.474710 AGCAATAAATGAAGAAATAGAGGCAT 57.525 30.769 0.00 0.00 0.00 4.40
3003 4306 7.886629 AGCAATAAATGAAGAAATAGAGGCA 57.113 32.000 0.00 0.00 0.00 4.75
3004 4307 7.168804 GCAAGCAATAAATGAAGAAATAGAGGC 59.831 37.037 0.00 0.00 0.00 4.70
3005 4308 7.650903 GGCAAGCAATAAATGAAGAAATAGAGG 59.349 37.037 0.00 0.00 0.00 3.69
3006 4309 8.192774 TGGCAAGCAATAAATGAAGAAATAGAG 58.807 33.333 0.00 0.00 0.00 2.43
3007 4310 7.975616 GTGGCAAGCAATAAATGAAGAAATAGA 59.024 33.333 0.00 0.00 0.00 1.98
3008 4311 7.043854 CGTGGCAAGCAATAAATGAAGAAATAG 60.044 37.037 0.00 0.00 0.00 1.73
3009 4312 6.751425 CGTGGCAAGCAATAAATGAAGAAATA 59.249 34.615 0.00 0.00 0.00 1.40
3010 4313 5.577945 CGTGGCAAGCAATAAATGAAGAAAT 59.422 36.000 0.00 0.00 0.00 2.17
3011 4314 4.922692 CGTGGCAAGCAATAAATGAAGAAA 59.077 37.500 0.00 0.00 0.00 2.52
3012 4315 4.022416 ACGTGGCAAGCAATAAATGAAGAA 60.022 37.500 0.00 0.00 0.00 2.52
3013 4316 3.505680 ACGTGGCAAGCAATAAATGAAGA 59.494 39.130 0.00 0.00 0.00 2.87
3014 4317 3.836949 ACGTGGCAAGCAATAAATGAAG 58.163 40.909 0.00 0.00 0.00 3.02
3015 4318 3.669290 CGACGTGGCAAGCAATAAATGAA 60.669 43.478 0.00 0.00 0.00 2.57
3016 4319 2.159585 CGACGTGGCAAGCAATAAATGA 60.160 45.455 0.00 0.00 0.00 2.57
3017 4320 2.176369 CGACGTGGCAAGCAATAAATG 58.824 47.619 0.00 0.00 0.00 2.32
3018 4321 1.810151 ACGACGTGGCAAGCAATAAAT 59.190 42.857 0.00 0.00 0.00 1.40
3019 4322 1.195900 GACGACGTGGCAAGCAATAAA 59.804 47.619 4.58 0.00 0.00 1.40
3020 4323 0.793861 GACGACGTGGCAAGCAATAA 59.206 50.000 4.58 0.00 0.00 1.40
3021 4324 0.037697 AGACGACGTGGCAAGCAATA 60.038 50.000 4.58 0.00 0.00 1.90
3022 4325 0.037697 TAGACGACGTGGCAAGCAAT 60.038 50.000 4.58 0.00 0.00 3.56
3023 4326 0.037697 ATAGACGACGTGGCAAGCAA 60.038 50.000 4.58 0.00 0.00 3.91
3024 4327 0.037697 AATAGACGACGTGGCAAGCA 60.038 50.000 4.58 0.00 0.00 3.91
3025 4328 1.076332 AAATAGACGACGTGGCAAGC 58.924 50.000 4.58 0.00 0.00 4.01
3026 4329 4.804139 AGATAAAATAGACGACGTGGCAAG 59.196 41.667 4.58 0.00 0.00 4.01
3027 4330 4.751060 AGATAAAATAGACGACGTGGCAA 58.249 39.130 4.58 0.00 0.00 4.52
3028 4331 4.380841 AGATAAAATAGACGACGTGGCA 57.619 40.909 4.58 0.00 0.00 4.92
3029 4332 5.755813 TCTAGATAAAATAGACGACGTGGC 58.244 41.667 4.58 0.00 0.00 5.01
3030 4333 9.491934 CATATCTAGATAAAATAGACGACGTGG 57.508 37.037 16.27 0.00 32.27 4.94
3046 4349 9.026121 GGGTAGTAACATCACACATATCTAGAT 57.974 37.037 10.73 10.73 0.00 1.98
3047 4350 8.002459 TGGGTAGTAACATCACACATATCTAGA 58.998 37.037 0.00 0.00 0.00 2.43
3048 4351 8.178313 TGGGTAGTAACATCACACATATCTAG 57.822 38.462 0.00 0.00 0.00 2.43
3049 4352 8.585018 CATGGGTAGTAACATCACACATATCTA 58.415 37.037 0.00 0.00 34.09 1.98
3050 4353 7.071196 ACATGGGTAGTAACATCACACATATCT 59.929 37.037 0.00 0.00 34.09 1.98
3051 4354 7.217200 ACATGGGTAGTAACATCACACATATC 58.783 38.462 0.00 0.00 34.09 1.63
3052 4355 7.136822 ACATGGGTAGTAACATCACACATAT 57.863 36.000 0.00 0.00 34.09 1.78
3053 4356 6.553953 ACATGGGTAGTAACATCACACATA 57.446 37.500 0.00 0.00 34.09 2.29
3054 4357 5.435686 ACATGGGTAGTAACATCACACAT 57.564 39.130 0.00 0.00 36.76 3.21
3055 4358 4.901197 ACATGGGTAGTAACATCACACA 57.099 40.909 0.00 0.00 0.00 3.72
3056 4359 6.403878 AGTAACATGGGTAGTAACATCACAC 58.596 40.000 0.00 0.00 0.00 3.82
3057 4360 6.351541 GGAGTAACATGGGTAGTAACATCACA 60.352 42.308 0.00 0.00 0.00 3.58
3058 4361 6.047231 GGAGTAACATGGGTAGTAACATCAC 58.953 44.000 0.00 0.00 0.00 3.06
3059 4362 5.129815 GGGAGTAACATGGGTAGTAACATCA 59.870 44.000 0.00 0.00 0.00 3.07
3060 4363 5.454329 GGGGAGTAACATGGGTAGTAACATC 60.454 48.000 0.00 0.00 0.00 3.06
3061 4364 4.411212 GGGGAGTAACATGGGTAGTAACAT 59.589 45.833 0.00 0.00 0.00 2.71
3062 4365 3.776417 GGGGAGTAACATGGGTAGTAACA 59.224 47.826 0.00 0.00 0.00 2.41
3063 4366 3.135348 GGGGGAGTAACATGGGTAGTAAC 59.865 52.174 0.00 0.00 0.00 2.50
3064 4367 3.014342 AGGGGGAGTAACATGGGTAGTAA 59.986 47.826 0.00 0.00 0.00 2.24
3065 4368 2.593466 AGGGGGAGTAACATGGGTAGTA 59.407 50.000 0.00 0.00 0.00 1.82
3066 4369 1.368558 AGGGGGAGTAACATGGGTAGT 59.631 52.381 0.00 0.00 0.00 2.73
3067 4370 1.768870 CAGGGGGAGTAACATGGGTAG 59.231 57.143 0.00 0.00 0.00 3.18
3068 4371 1.081513 ACAGGGGGAGTAACATGGGTA 59.918 52.381 0.00 0.00 0.00 3.69
3069 4372 0.178843 ACAGGGGGAGTAACATGGGT 60.179 55.000 0.00 0.00 0.00 4.51
3070 4373 0.255890 CACAGGGGGAGTAACATGGG 59.744 60.000 0.00 0.00 0.00 4.00
3071 4374 0.255890 CCACAGGGGGAGTAACATGG 59.744 60.000 0.00 0.00 0.00 3.66
3072 4375 3.882131 CCACAGGGGGAGTAACATG 57.118 57.895 0.00 0.00 0.00 3.21
3084 4387 1.218316 GCCTTAGACGACCCACAGG 59.782 63.158 0.00 0.00 40.04 4.00
3085 4388 0.389948 GTGCCTTAGACGACCCACAG 60.390 60.000 0.00 0.00 0.00 3.66
3086 4389 1.116536 TGTGCCTTAGACGACCCACA 61.117 55.000 0.00 0.00 0.00 4.17
3087 4390 0.669625 GTGTGCCTTAGACGACCCAC 60.670 60.000 0.00 0.00 0.00 4.61
3088 4391 1.116536 TGTGTGCCTTAGACGACCCA 61.117 55.000 0.00 0.00 0.00 4.51
3089 4392 0.669625 GTGTGTGCCTTAGACGACCC 60.670 60.000 0.00 0.00 0.00 4.46
3090 4393 1.007336 CGTGTGTGCCTTAGACGACC 61.007 60.000 0.00 0.00 37.02 4.79
3091 4394 0.039798 TCGTGTGTGCCTTAGACGAC 60.040 55.000 0.00 0.00 38.64 4.34
3092 4395 0.240145 CTCGTGTGTGCCTTAGACGA 59.760 55.000 0.00 0.00 40.78 4.20
3093 4396 0.039437 ACTCGTGTGTGCCTTAGACG 60.039 55.000 0.00 0.00 36.31 4.18
3094 4397 1.669211 GGACTCGTGTGTGCCTTAGAC 60.669 57.143 0.00 0.00 0.00 2.59
3095 4398 0.601558 GGACTCGTGTGTGCCTTAGA 59.398 55.000 0.00 0.00 0.00 2.10
3096 4399 0.732880 CGGACTCGTGTGTGCCTTAG 60.733 60.000 0.00 0.00 0.00 2.18
3186 4491 9.871238 AGTTTACTTCAATATGTGTAGGTACAG 57.129 33.333 0.00 0.00 36.78 2.74
3286 4619 7.288560 TCTACATAGAGAGGAATCTACGGTTT 58.711 38.462 0.00 0.00 34.68 3.27
3390 4724 7.111466 AGATGGAGGAAGAGAAAAGAAATGAG 58.889 38.462 0.00 0.00 0.00 2.90
3393 4728 6.012157 TGGAGATGGAGGAAGAGAAAAGAAAT 60.012 38.462 0.00 0.00 0.00 2.17
3447 4783 4.899502 AGACATTTTCCAGTCACTGTAGG 58.100 43.478 3.56 0.00 37.23 3.18
3759 5102 2.174639 ACTGAAGTGTGTTTCCATCCCA 59.825 45.455 0.00 0.00 0.00 4.37
3774 5133 9.243637 GAAGAAGATGTTATGTAGCTACTGAAG 57.756 37.037 23.84 0.00 0.00 3.02
3775 5134 8.749354 TGAAGAAGATGTTATGTAGCTACTGAA 58.251 33.333 23.84 14.71 0.00 3.02
3776 5135 8.293699 TGAAGAAGATGTTATGTAGCTACTGA 57.706 34.615 23.84 9.57 0.00 3.41
3777 5136 8.976471 CATGAAGAAGATGTTATGTAGCTACTG 58.024 37.037 23.84 4.65 0.00 2.74
3778 5137 8.700051 ACATGAAGAAGATGTTATGTAGCTACT 58.300 33.333 23.84 12.28 29.39 2.57
3779 5138 8.879342 ACATGAAGAAGATGTTATGTAGCTAC 57.121 34.615 17.30 17.30 29.39 3.58
3780 5139 9.317936 CAACATGAAGAAGATGTTATGTAGCTA 57.682 33.333 0.00 0.00 41.16 3.32
3781 5140 7.826252 ACAACATGAAGAAGATGTTATGTAGCT 59.174 33.333 0.00 0.00 41.16 3.32
3782 5141 7.978982 ACAACATGAAGAAGATGTTATGTAGC 58.021 34.615 0.00 0.00 41.16 3.58
3785 5144 9.683069 GAAAACAACATGAAGAAGATGTTATGT 57.317 29.630 0.00 0.00 41.16 2.29
3786 5145 9.681692 TGAAAACAACATGAAGAAGATGTTATG 57.318 29.630 0.00 0.00 41.16 1.90
3787 5146 9.683069 GTGAAAACAACATGAAGAAGATGTTAT 57.317 29.630 0.00 0.00 41.16 1.89
3788 5147 8.681806 TGTGAAAACAACATGAAGAAGATGTTA 58.318 29.630 0.00 0.00 41.16 2.41
3789 5148 7.546358 TGTGAAAACAACATGAAGAAGATGTT 58.454 30.769 0.00 0.00 43.34 2.71
3832 5191 2.485814 GCTGAACAGTCCACATTCCTTC 59.514 50.000 3.77 0.00 0.00 3.46
3837 5196 2.479566 ATCGCTGAACAGTCCACATT 57.520 45.000 3.77 0.00 0.00 2.71
3842 5201 3.489785 CGGTATAAATCGCTGAACAGTCC 59.510 47.826 3.77 0.00 0.00 3.85
3851 5210 3.875134 CCCAAAAGTCGGTATAAATCGCT 59.125 43.478 0.00 0.00 0.00 4.93
3881 5259 3.067106 CTCCAGCAACGTACAACAAGAT 58.933 45.455 0.00 0.00 0.00 2.40
4251 5672 6.877855 ACTAAAAAGAAACGGAGGGAGTATTC 59.122 38.462 0.00 0.00 0.00 1.75
4257 5678 4.037089 GCAAACTAAAAAGAAACGGAGGGA 59.963 41.667 0.00 0.00 0.00 4.20
4258 5679 4.202070 TGCAAACTAAAAAGAAACGGAGGG 60.202 41.667 0.00 0.00 0.00 4.30
4259 5680 4.927422 TGCAAACTAAAAAGAAACGGAGG 58.073 39.130 0.00 0.00 0.00 4.30
4260 5681 9.834628 TTATATGCAAACTAAAAAGAAACGGAG 57.165 29.630 0.00 0.00 0.00 4.63
4261 5682 9.834628 CTTATATGCAAACTAAAAAGAAACGGA 57.165 29.630 0.00 0.00 0.00 4.69
4262 5683 9.834628 TCTTATATGCAAACTAAAAAGAAACGG 57.165 29.630 0.00 0.00 0.00 4.44
4274 5695 8.806146 ACTTTGACCAAATCTTATATGCAAACT 58.194 29.630 0.00 0.00 0.00 2.66
4275 5696 8.986477 ACTTTGACCAAATCTTATATGCAAAC 57.014 30.769 0.00 0.00 0.00 2.93
4276 5697 8.801299 TGACTTTGACCAAATCTTATATGCAAA 58.199 29.630 0.00 0.00 0.00 3.68
4277 5698 8.347004 TGACTTTGACCAAATCTTATATGCAA 57.653 30.769 0.00 0.00 0.00 4.08
4278 5699 7.936496 TGACTTTGACCAAATCTTATATGCA 57.064 32.000 0.00 0.00 0.00 3.96
4279 5700 9.076596 GTTTGACTTTGACCAAATCTTATATGC 57.923 33.333 0.00 0.00 35.14 3.14
4282 5703 9.349713 AGTGTTTGACTTTGACCAAATCTTATA 57.650 29.630 0.00 0.00 35.14 0.98
4283 5704 8.137437 CAGTGTTTGACTTTGACCAAATCTTAT 58.863 33.333 0.00 0.00 35.14 1.73
4284 5705 7.122055 ACAGTGTTTGACTTTGACCAAATCTTA 59.878 33.333 0.00 0.00 35.14 2.10
4285 5706 6.071391 ACAGTGTTTGACTTTGACCAAATCTT 60.071 34.615 0.00 0.00 35.14 2.40
4286 5707 5.418840 ACAGTGTTTGACTTTGACCAAATCT 59.581 36.000 0.00 0.00 35.14 2.40
4287 5708 5.650543 ACAGTGTTTGACTTTGACCAAATC 58.349 37.500 0.00 0.00 35.14 2.17
4288 5709 5.659440 ACAGTGTTTGACTTTGACCAAAT 57.341 34.783 0.00 0.00 35.14 2.32
4289 5710 6.576662 TTACAGTGTTTGACTTTGACCAAA 57.423 33.333 0.00 0.00 29.75 3.28
4290 5711 6.576662 TTTACAGTGTTTGACTTTGACCAA 57.423 33.333 0.00 0.00 29.75 3.67
4291 5712 6.576662 TTTTACAGTGTTTGACTTTGACCA 57.423 33.333 0.00 0.00 29.75 4.02
4292 5713 8.379902 CAAATTTTACAGTGTTTGACTTTGACC 58.620 33.333 0.00 0.00 34.38 4.02
4293 5714 9.134734 TCAAATTTTACAGTGTTTGACTTTGAC 57.865 29.630 0.00 0.00 36.11 3.18
4300 5721 8.220755 AGCTAGTCAAATTTTACAGTGTTTGA 57.779 30.769 0.00 1.77 38.01 2.69
4301 5722 8.856490 AAGCTAGTCAAATTTTACAGTGTTTG 57.144 30.769 0.00 0.00 33.91 2.93
4302 5723 9.301153 CAAAGCTAGTCAAATTTTACAGTGTTT 57.699 29.630 0.00 0.00 0.00 2.83
4303 5724 8.466798 ACAAAGCTAGTCAAATTTTACAGTGTT 58.533 29.630 0.00 0.00 0.00 3.32
4304 5725 7.996385 ACAAAGCTAGTCAAATTTTACAGTGT 58.004 30.769 0.00 0.00 0.00 3.55
4305 5726 9.599322 CTACAAAGCTAGTCAAATTTTACAGTG 57.401 33.333 5.36 0.00 0.00 3.66
4306 5727 8.290325 GCTACAAAGCTAGTCAAATTTTACAGT 58.710 33.333 5.36 0.00 45.85 3.55
4307 5728 8.660968 GCTACAAAGCTAGTCAAATTTTACAG 57.339 34.615 5.36 2.50 45.85 2.74
4324 5745 9.844790 TCATTGTTGATATCTTTTGCTACAAAG 57.155 29.630 3.98 0.00 31.87 2.77
4325 5746 9.624697 GTCATTGTTGATATCTTTTGCTACAAA 57.375 29.630 3.98 0.00 33.56 2.83
4326 5747 8.791675 TGTCATTGTTGATATCTTTTGCTACAA 58.208 29.630 3.98 0.00 33.56 2.41
4327 5748 8.236586 GTGTCATTGTTGATATCTTTTGCTACA 58.763 33.333 3.98 0.00 33.56 2.74
4328 5749 8.454106 AGTGTCATTGTTGATATCTTTTGCTAC 58.546 33.333 3.98 0.00 33.56 3.58
4329 5750 8.565896 AGTGTCATTGTTGATATCTTTTGCTA 57.434 30.769 3.98 0.00 33.56 3.49
4330 5751 7.458409 AGTGTCATTGTTGATATCTTTTGCT 57.542 32.000 3.98 0.00 33.56 3.91
4331 5752 9.229784 CATAGTGTCATTGTTGATATCTTTTGC 57.770 33.333 3.98 0.00 33.56 3.68
4375 5796 9.708092 TGTTCTGAAAATTTATTTCATCATGCA 57.292 25.926 4.28 0.00 37.72 3.96
4451 5872 8.188139 CGCATATAAGGTTTGGTCAAAGTATTT 58.812 33.333 0.00 0.00 40.26 1.40
4452 5873 7.201785 CCGCATATAAGGTTTGGTCAAAGTATT 60.202 37.037 0.00 0.00 0.00 1.89
4453 5874 6.262273 CCGCATATAAGGTTTGGTCAAAGTAT 59.738 38.462 0.00 0.00 0.00 2.12
4454 5875 5.587043 CCGCATATAAGGTTTGGTCAAAGTA 59.413 40.000 0.00 0.00 0.00 2.24
4455 5876 4.398044 CCGCATATAAGGTTTGGTCAAAGT 59.602 41.667 0.00 0.00 0.00 2.66
4456 5877 4.638421 TCCGCATATAAGGTTTGGTCAAAG 59.362 41.667 0.00 0.00 0.00 2.77
4457 5878 4.590918 TCCGCATATAAGGTTTGGTCAAA 58.409 39.130 0.00 0.00 0.00 2.69
4458 5879 4.196193 CTCCGCATATAAGGTTTGGTCAA 58.804 43.478 0.00 0.00 0.00 3.18
4459 5880 3.199071 ACTCCGCATATAAGGTTTGGTCA 59.801 43.478 0.00 0.00 0.00 4.02
4460 5881 3.805207 ACTCCGCATATAAGGTTTGGTC 58.195 45.455 0.00 0.00 0.00 4.02
4461 5882 3.926058 ACTCCGCATATAAGGTTTGGT 57.074 42.857 0.00 0.00 0.00 3.67
4462 5883 6.687081 TTTTACTCCGCATATAAGGTTTGG 57.313 37.500 0.00 0.00 0.00 3.28
4463 5884 7.981142 TCTTTTTACTCCGCATATAAGGTTTG 58.019 34.615 0.00 0.00 0.00 2.93
4464 5885 8.570068 TTCTTTTTACTCCGCATATAAGGTTT 57.430 30.769 0.00 0.00 0.00 3.27
4465 5886 8.456471 GTTTCTTTTTACTCCGCATATAAGGTT 58.544 33.333 0.00 0.00 0.00 3.50
4466 5887 7.201582 CGTTTCTTTTTACTCCGCATATAAGGT 60.202 37.037 0.00 0.00 0.00 3.50
4467 5888 7.123830 CGTTTCTTTTTACTCCGCATATAAGG 58.876 38.462 0.00 0.00 0.00 2.69
4468 5889 7.010738 TCCGTTTCTTTTTACTCCGCATATAAG 59.989 37.037 0.00 0.00 0.00 1.73
4469 5890 6.817641 TCCGTTTCTTTTTACTCCGCATATAA 59.182 34.615 0.00 0.00 0.00 0.98
4470 5891 6.339730 TCCGTTTCTTTTTACTCCGCATATA 58.660 36.000 0.00 0.00 0.00 0.86
4471 5892 5.180271 TCCGTTTCTTTTTACTCCGCATAT 58.820 37.500 0.00 0.00 0.00 1.78
4472 5893 4.567971 TCCGTTTCTTTTTACTCCGCATA 58.432 39.130 0.00 0.00 0.00 3.14
4473 5894 3.404899 TCCGTTTCTTTTTACTCCGCAT 58.595 40.909 0.00 0.00 0.00 4.73
4474 5895 2.803956 CTCCGTTTCTTTTTACTCCGCA 59.196 45.455 0.00 0.00 0.00 5.69
4475 5896 2.159037 CCTCCGTTTCTTTTTACTCCGC 59.841 50.000 0.00 0.00 0.00 5.54
4476 5897 2.740447 CCCTCCGTTTCTTTTTACTCCG 59.260 50.000 0.00 0.00 0.00 4.63
4477 5898 4.001652 CTCCCTCCGTTTCTTTTTACTCC 58.998 47.826 0.00 0.00 0.00 3.85
4478 5899 4.639334 ACTCCCTCCGTTTCTTTTTACTC 58.361 43.478 0.00 0.00 0.00 2.59
4479 5900 4.701651 ACTCCCTCCGTTTCTTTTTACT 57.298 40.909 0.00 0.00 0.00 2.24
4480 5901 5.299949 TGTACTCCCTCCGTTTCTTTTTAC 58.700 41.667 0.00 0.00 0.00 2.01
4481 5902 5.549742 TGTACTCCCTCCGTTTCTTTTTA 57.450 39.130 0.00 0.00 0.00 1.52
4482 5903 4.426736 TGTACTCCCTCCGTTTCTTTTT 57.573 40.909 0.00 0.00 0.00 1.94
4483 5904 4.102054 TCTTGTACTCCCTCCGTTTCTTTT 59.898 41.667 0.00 0.00 0.00 2.27
4484 5905 3.644738 TCTTGTACTCCCTCCGTTTCTTT 59.355 43.478 0.00 0.00 0.00 2.52
4485 5906 3.236896 TCTTGTACTCCCTCCGTTTCTT 58.763 45.455 0.00 0.00 0.00 2.52
4486 5907 2.885616 TCTTGTACTCCCTCCGTTTCT 58.114 47.619 0.00 0.00 0.00 2.52
4487 5908 3.056035 ACATCTTGTACTCCCTCCGTTTC 60.056 47.826 0.00 0.00 0.00 2.78
4488 5909 2.904434 ACATCTTGTACTCCCTCCGTTT 59.096 45.455 0.00 0.00 0.00 3.60
4489 5910 2.233922 CACATCTTGTACTCCCTCCGTT 59.766 50.000 0.00 0.00 0.00 4.44
4490 5911 1.825474 CACATCTTGTACTCCCTCCGT 59.175 52.381 0.00 0.00 0.00 4.69
4491 5912 1.137086 CCACATCTTGTACTCCCTCCG 59.863 57.143 0.00 0.00 0.00 4.63
4492 5913 2.168728 GTCCACATCTTGTACTCCCTCC 59.831 54.545 0.00 0.00 0.00 4.30
4493 5914 2.832129 TGTCCACATCTTGTACTCCCTC 59.168 50.000 0.00 0.00 0.00 4.30
4494 5915 2.902608 TGTCCACATCTTGTACTCCCT 58.097 47.619 0.00 0.00 0.00 4.20
4495 5916 3.055094 ACATGTCCACATCTTGTACTCCC 60.055 47.826 0.00 0.00 33.61 4.30
4496 5917 3.935203 CACATGTCCACATCTTGTACTCC 59.065 47.826 0.00 0.00 33.61 3.85
4497 5918 3.935203 CCACATGTCCACATCTTGTACTC 59.065 47.826 0.00 0.00 33.61 2.59
4498 5919 3.307691 CCCACATGTCCACATCTTGTACT 60.308 47.826 0.00 0.00 33.61 2.73
4499 5920 3.009723 CCCACATGTCCACATCTTGTAC 58.990 50.000 0.00 0.00 33.61 2.90
4500 5921 2.617788 GCCCACATGTCCACATCTTGTA 60.618 50.000 0.00 0.00 33.61 2.41
4501 5922 1.887956 GCCCACATGTCCACATCTTGT 60.888 52.381 0.00 0.00 33.61 3.16
4502 5923 0.813184 GCCCACATGTCCACATCTTG 59.187 55.000 0.00 0.00 33.61 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.