Multiple sequence alignment - TraesCS2D01G597000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G597000 | chr2D | 100.000 | 3479 | 0 | 0 | 1 | 3479 | 649617535 | 649614057 | 0.000000e+00 | 6425.0 |
1 | TraesCS2D01G597000 | chr2D | 89.867 | 602 | 43 | 13 | 1684 | 2275 | 164280091 | 164280684 | 0.000000e+00 | 758.0 |
2 | TraesCS2D01G597000 | chr2B | 93.600 | 2250 | 65 | 37 | 557 | 2758 | 785291483 | 785289265 | 0.000000e+00 | 3284.0 |
3 | TraesCS2D01G597000 | chr2B | 95.087 | 346 | 14 | 2 | 1930 | 2275 | 788845286 | 788844944 | 3.050000e-150 | 542.0 |
4 | TraesCS2D01G597000 | chr2B | 86.286 | 350 | 13 | 8 | 3133 | 3479 | 785289223 | 785288906 | 7.150000e-92 | 348.0 |
5 | TraesCS2D01G597000 | chr2B | 95.429 | 175 | 8 | 0 | 1684 | 1858 | 788846914 | 788846740 | 2.640000e-71 | 279.0 |
6 | TraesCS2D01G597000 | chr2B | 94.382 | 178 | 10 | 0 | 1684 | 1861 | 746164891 | 746164714 | 1.230000e-69 | 274.0 |
7 | TraesCS2D01G597000 | chr2B | 79.004 | 281 | 21 | 9 | 254 | 498 | 785291938 | 785291660 | 1.290000e-34 | 158.0 |
8 | TraesCS2D01G597000 | chr2B | 95.556 | 45 | 2 | 0 | 3072 | 3116 | 785289264 | 785289220 | 4.820000e-09 | 73.1 |
9 | TraesCS2D01G597000 | chr2B | 94.444 | 36 | 2 | 0 | 1678 | 1713 | 746164432 | 746164397 | 4.850000e-04 | 56.5 |
10 | TraesCS2D01G597000 | chr2A | 94.597 | 1925 | 52 | 20 | 557 | 2480 | 775208491 | 775210364 | 0.000000e+00 | 2931.0 |
11 | TraesCS2D01G597000 | chr2A | 90.674 | 193 | 9 | 3 | 3181 | 3368 | 775211040 | 775211228 | 7.460000e-62 | 248.0 |
12 | TraesCS2D01G597000 | chr2A | 86.486 | 148 | 17 | 3 | 402 | 546 | 775207033 | 775207180 | 3.590000e-35 | 159.0 |
13 | TraesCS2D01G597000 | chr2A | 85.315 | 143 | 17 | 2 | 1 | 143 | 775204728 | 775204866 | 1.010000e-30 | 145.0 |
14 | TraesCS2D01G597000 | chr2A | 77.826 | 230 | 20 | 12 | 204 | 409 | 775206644 | 775206866 | 2.840000e-21 | 113.0 |
15 | TraesCS2D01G597000 | chr2A | 89.062 | 64 | 3 | 1 | 2635 | 2698 | 775210527 | 775210586 | 3.720000e-10 | 76.8 |
16 | TraesCS2D01G597000 | chr3B | 87.687 | 601 | 51 | 17 | 1687 | 2275 | 794285647 | 794285058 | 0.000000e+00 | 678.0 |
17 | TraesCS2D01G597000 | chr3B | 94.382 | 178 | 10 | 0 | 1684 | 1861 | 487555882 | 487555705 | 1.230000e-69 | 274.0 |
18 | TraesCS2D01G597000 | chr3B | 93.023 | 86 | 6 | 0 | 2190 | 2275 | 487555595 | 487555510 | 3.650000e-25 | 126.0 |
19 | TraesCS2D01G597000 | chr1B | 93.878 | 98 | 6 | 0 | 1684 | 1781 | 36276412 | 36276315 | 7.780000e-32 | 148.0 |
20 | TraesCS2D01G597000 | chr1B | 97.222 | 36 | 1 | 0 | 2147 | 2182 | 36276316 | 36276281 | 1.040000e-05 | 62.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G597000 | chr2D | 649614057 | 649617535 | 3478 | True | 6425.000000 | 6425 | 100.000000 | 1 | 3479 | 1 | chr2D.!!$R1 | 3478 |
1 | TraesCS2D01G597000 | chr2D | 164280091 | 164280684 | 593 | False | 758.000000 | 758 | 89.867000 | 1684 | 2275 | 1 | chr2D.!!$F1 | 591 |
2 | TraesCS2D01G597000 | chr2B | 785288906 | 785291938 | 3032 | True | 965.775000 | 3284 | 88.611500 | 254 | 3479 | 4 | chr2B.!!$R2 | 3225 |
3 | TraesCS2D01G597000 | chr2B | 788844944 | 788846914 | 1970 | True | 410.500000 | 542 | 95.258000 | 1684 | 2275 | 2 | chr2B.!!$R3 | 591 |
4 | TraesCS2D01G597000 | chr2A | 775204728 | 775211228 | 6500 | False | 612.133333 | 2931 | 87.326667 | 1 | 3368 | 6 | chr2A.!!$F1 | 3367 |
5 | TraesCS2D01G597000 | chr3B | 794285058 | 794285647 | 589 | True | 678.000000 | 678 | 87.687000 | 1687 | 2275 | 1 | chr3B.!!$R1 | 588 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
374 | 2104 | 0.107017 | CATGATTTCACGGAGGCCCT | 60.107 | 55.0 | 0.0 | 0.0 | 0.00 | 5.19 | F |
377 | 2107 | 0.181350 | GATTTCACGGAGGCCCTCAT | 59.819 | 55.0 | 13.9 | 0.0 | 31.08 | 2.90 | F |
513 | 2448 | 0.598680 | GAGATCGCCGTCCTTGGATG | 60.599 | 60.0 | 2.0 | 2.0 | 0.00 | 3.51 | F |
1794 | 5074 | 0.181587 | TCTCCTACTGCCTCCTCTCG | 59.818 | 60.0 | 0.0 | 0.0 | 0.00 | 4.04 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1356 | 4636 | 1.656587 | TCTGGCACTGGTAGTTGGAT | 58.343 | 50.000 | 0.00 | 0.0 | 0.00 | 3.41 | R |
1769 | 5049 | 1.903183 | GGAGGCAGTAGGAGAACTTGT | 59.097 | 52.381 | 0.00 | 0.0 | 0.00 | 3.16 | R |
1863 | 5143 | 3.006706 | GCGTACTGCATCGCCTTC | 58.993 | 61.111 | 16.41 | 0.0 | 45.54 | 3.46 | R |
3047 | 7811 | 0.034337 | GCACCGTCCCTGTGTTTCTA | 59.966 | 55.000 | 0.00 | 0.0 | 36.11 | 2.10 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
37 | 38 | 2.546789 | CTGGTTAGTTTGTGTTCGTCCC | 59.453 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
53 | 54 | 5.195001 | TCGTCCCTTTTTCTTGATTTTGG | 57.805 | 39.130 | 0.00 | 0.00 | 0.00 | 3.28 |
57 | 58 | 4.719273 | TCCCTTTTTCTTGATTTTGGTGGT | 59.281 | 37.500 | 0.00 | 0.00 | 0.00 | 4.16 |
70 | 71 | 1.304254 | TGGTGGTGTGATTCGTTGTG | 58.696 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
76 | 77 | 4.271533 | GTGGTGTGATTCGTTGTGACTTTA | 59.728 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
85 | 86 | 6.746745 | TTCGTTGTGACTTTAAAGACCTTT | 57.253 | 33.333 | 21.92 | 0.00 | 36.63 | 3.11 |
86 | 87 | 6.746745 | TCGTTGTGACTTTAAAGACCTTTT | 57.253 | 33.333 | 21.92 | 0.00 | 34.23 | 2.27 |
114 | 115 | 4.270084 | TGCGAGTTGTAGAAAGACTTTGTG | 59.730 | 41.667 | 4.85 | 0.00 | 0.00 | 3.33 |
121 | 122 | 5.607477 | TGTAGAAAGACTTTGTGGTTCGAT | 58.393 | 37.500 | 4.85 | 0.00 | 0.00 | 3.59 |
122 | 123 | 5.465390 | TGTAGAAAGACTTTGTGGTTCGATG | 59.535 | 40.000 | 4.85 | 0.00 | 0.00 | 3.84 |
133 | 134 | 5.707242 | TGTGGTTCGATGACCTATATCTC | 57.293 | 43.478 | 7.76 | 0.00 | 40.47 | 2.75 |
134 | 135 | 4.523173 | TGTGGTTCGATGACCTATATCTCC | 59.477 | 45.833 | 7.76 | 0.00 | 40.47 | 3.71 |
143 | 144 | 3.932562 | TGACCTATATCTCCAGGGGATCT | 59.067 | 47.826 | 4.54 | 0.00 | 36.15 | 2.75 |
144 | 145 | 4.264577 | TGACCTATATCTCCAGGGGATCTG | 60.265 | 50.000 | 4.54 | 0.00 | 43.00 | 2.90 |
153 | 154 | 2.834638 | CAGGGGATCTGGTTTTGGAT | 57.165 | 50.000 | 0.00 | 0.00 | 39.76 | 3.41 |
154 | 155 | 2.381911 | CAGGGGATCTGGTTTTGGATG | 58.618 | 52.381 | 0.00 | 0.00 | 39.76 | 3.51 |
156 | 157 | 1.689258 | GGGGATCTGGTTTTGGATGGG | 60.689 | 57.143 | 0.00 | 0.00 | 0.00 | 4.00 |
157 | 158 | 1.114627 | GGATCTGGTTTTGGATGGGC | 58.885 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
158 | 159 | 0.740737 | GATCTGGTTTTGGATGGGCG | 59.259 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
159 | 160 | 0.331278 | ATCTGGTTTTGGATGGGCGA | 59.669 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
160 | 161 | 0.331278 | TCTGGTTTTGGATGGGCGAT | 59.669 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
162 | 163 | 1.134946 | CTGGTTTTGGATGGGCGATTC | 59.865 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
165 | 166 | 2.417243 | GGTTTTGGATGGGCGATTCAAG | 60.417 | 50.000 | 3.34 | 0.00 | 30.69 | 3.02 |
166 | 167 | 2.491693 | GTTTTGGATGGGCGATTCAAGA | 59.508 | 45.455 | 3.34 | 0.00 | 30.69 | 3.02 |
167 | 168 | 2.042686 | TTGGATGGGCGATTCAAGAG | 57.957 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
168 | 169 | 0.181114 | TGGATGGGCGATTCAAGAGG | 59.819 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
170 | 171 | 1.408822 | GGATGGGCGATTCAAGAGGTT | 60.409 | 52.381 | 0.00 | 0.00 | 0.00 | 3.50 |
171 | 172 | 2.369394 | GATGGGCGATTCAAGAGGTTT | 58.631 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 |
172 | 173 | 1.821216 | TGGGCGATTCAAGAGGTTTC | 58.179 | 50.000 | 0.00 | 0.00 | 0.00 | 2.78 |
173 | 174 | 1.351017 | TGGGCGATTCAAGAGGTTTCT | 59.649 | 47.619 | 0.00 | 0.00 | 34.29 | 2.52 |
174 | 175 | 2.569853 | TGGGCGATTCAAGAGGTTTCTA | 59.430 | 45.455 | 0.00 | 0.00 | 31.96 | 2.10 |
176 | 177 | 4.007659 | GGGCGATTCAAGAGGTTTCTAAA | 58.992 | 43.478 | 0.00 | 0.00 | 31.96 | 1.85 |
177 | 178 | 4.457949 | GGGCGATTCAAGAGGTTTCTAAAA | 59.542 | 41.667 | 0.00 | 0.00 | 31.96 | 1.52 |
178 | 179 | 5.391449 | GGCGATTCAAGAGGTTTCTAAAAC | 58.609 | 41.667 | 0.00 | 0.00 | 31.96 | 2.43 |
192 | 193 | 8.315391 | GGTTTCTAAAACCTATGAAAGTACGT | 57.685 | 34.615 | 13.14 | 0.00 | 37.34 | 3.57 |
197 | 1915 | 9.013229 | TCTAAAACCTATGAAAGTACGTAGTCA | 57.987 | 33.333 | 2.79 | 4.78 | 43.93 | 3.41 |
200 | 1918 | 9.498176 | AAAACCTATGAAAGTACGTAGTCAATT | 57.502 | 29.630 | 2.79 | 0.00 | 43.93 | 2.32 |
202 | 1920 | 9.798994 | AACCTATGAAAGTACGTAGTCAATTAG | 57.201 | 33.333 | 2.79 | 4.50 | 43.93 | 1.73 |
211 | 1929 | 2.348666 | CGTAGTCAATTAGTGCAGGTGC | 59.651 | 50.000 | 0.00 | 0.00 | 42.50 | 5.01 |
223 | 1941 | 0.378257 | GCAGGTGCACGAATGGTATG | 59.622 | 55.000 | 11.45 | 0.69 | 41.59 | 2.39 |
224 | 1942 | 1.737838 | CAGGTGCACGAATGGTATGT | 58.262 | 50.000 | 11.45 | 0.00 | 0.00 | 2.29 |
225 | 1943 | 2.899976 | CAGGTGCACGAATGGTATGTA | 58.100 | 47.619 | 11.45 | 0.00 | 0.00 | 2.29 |
226 | 1944 | 2.866156 | CAGGTGCACGAATGGTATGTAG | 59.134 | 50.000 | 11.45 | 0.00 | 0.00 | 2.74 |
228 | 1946 | 3.702548 | AGGTGCACGAATGGTATGTAGTA | 59.297 | 43.478 | 11.45 | 0.00 | 0.00 | 1.82 |
229 | 1947 | 4.344102 | AGGTGCACGAATGGTATGTAGTAT | 59.656 | 41.667 | 11.45 | 0.00 | 0.00 | 2.12 |
230 | 1948 | 4.684703 | GGTGCACGAATGGTATGTAGTATC | 59.315 | 45.833 | 11.45 | 0.00 | 0.00 | 2.24 |
231 | 1949 | 4.684703 | GTGCACGAATGGTATGTAGTATCC | 59.315 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
235 | 1953 | 4.021368 | ACGAATGGTATGTAGTATCCTGGC | 60.021 | 45.833 | 0.00 | 0.00 | 0.00 | 4.85 |
237 | 1955 | 5.482908 | GAATGGTATGTAGTATCCTGGCTG | 58.517 | 45.833 | 0.00 | 0.00 | 0.00 | 4.85 |
250 | 1968 | 0.461548 | CTGGCTGGATCGAAGTGCTA | 59.538 | 55.000 | 0.00 | 0.00 | 0.00 | 3.49 |
251 | 1969 | 0.461548 | TGGCTGGATCGAAGTGCTAG | 59.538 | 55.000 | 0.00 | 0.00 | 0.00 | 3.42 |
252 | 1970 | 0.747255 | GGCTGGATCGAAGTGCTAGA | 59.253 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
294 | 2012 | 2.922503 | TCACTTCCCGCCTCTGCA | 60.923 | 61.111 | 0.00 | 0.00 | 37.32 | 4.41 |
312 | 2030 | 4.516698 | TCTGCAAATTCTGAAGACAAGGAC | 59.483 | 41.667 | 0.00 | 0.00 | 34.42 | 3.85 |
313 | 2031 | 3.250762 | TGCAAATTCTGAAGACAAGGACG | 59.749 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
353 | 2082 | 2.520741 | CCGGCCACCCTTGTTTGT | 60.521 | 61.111 | 2.24 | 0.00 | 0.00 | 2.83 |
366 | 2096 | 3.426191 | CCTTGTTTGTGCATGATTTCACG | 59.574 | 43.478 | 0.00 | 0.00 | 36.06 | 4.35 |
374 | 2104 | 0.107017 | CATGATTTCACGGAGGCCCT | 60.107 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
377 | 2107 | 0.181350 | GATTTCACGGAGGCCCTCAT | 59.819 | 55.000 | 13.90 | 0.00 | 31.08 | 2.90 |
396 | 2143 | 4.334552 | TCATGGTGTACGTACCTAGTTGA | 58.665 | 43.478 | 22.43 | 15.08 | 41.43 | 3.18 |
513 | 2448 | 0.598680 | GAGATCGCCGTCCTTGGATG | 60.599 | 60.000 | 2.00 | 2.00 | 0.00 | 3.51 |
514 | 2449 | 2.203070 | ATCGCCGTCCTTGGATGC | 60.203 | 61.111 | 3.43 | 4.12 | 0.00 | 3.91 |
515 | 2450 | 3.757248 | ATCGCCGTCCTTGGATGCC | 62.757 | 63.158 | 3.43 | 0.00 | 0.00 | 4.40 |
516 | 2451 | 4.473520 | CGCCGTCCTTGGATGCCT | 62.474 | 66.667 | 3.43 | 0.00 | 0.00 | 4.75 |
518 | 2453 | 2.115291 | GCCGTCCTTGGATGCCTTC | 61.115 | 63.158 | 3.43 | 0.00 | 0.00 | 3.46 |
529 | 2465 | 1.133945 | GGATGCCTTCCTTCCTTCCTC | 60.134 | 57.143 | 0.00 | 0.00 | 41.78 | 3.71 |
530 | 2466 | 1.561542 | GATGCCTTCCTTCCTTCCTCA | 59.438 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
543 | 2479 | 6.662663 | CCTTCCTTCCTCATGAAAAGAAGAAT | 59.337 | 38.462 | 22.34 | 0.00 | 41.55 | 2.40 |
546 | 2482 | 8.115490 | TCCTTCCTCATGAAAAGAAGAATTTC | 57.885 | 34.615 | 22.34 | 0.00 | 38.38 | 2.17 |
547 | 2483 | 7.946776 | TCCTTCCTCATGAAAAGAAGAATTTCT | 59.053 | 33.333 | 22.34 | 0.00 | 45.51 | 2.52 |
718 | 3976 | 3.179265 | CACGACGACGATGGCCAC | 61.179 | 66.667 | 8.16 | 0.47 | 42.66 | 5.01 |
719 | 3977 | 4.430765 | ACGACGACGATGGCCACC | 62.431 | 66.667 | 8.16 | 0.00 | 42.66 | 4.61 |
855 | 4113 | 2.660064 | GCTCCCCACCGTCTGTCAT | 61.660 | 63.158 | 0.00 | 0.00 | 0.00 | 3.06 |
856 | 4114 | 1.517832 | CTCCCCACCGTCTGTCATC | 59.482 | 63.158 | 0.00 | 0.00 | 0.00 | 2.92 |
857 | 4115 | 0.972983 | CTCCCCACCGTCTGTCATCT | 60.973 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1048 | 4322 | 2.124778 | GCTTGCTCCTCCTCCTGC | 60.125 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
1225 | 4499 | 4.722700 | GCCAAGCCTCCGCCTCAA | 62.723 | 66.667 | 0.00 | 0.00 | 34.57 | 3.02 |
1384 | 4664 | 1.071987 | CAGTGCCAGAACTGCTCCA | 59.928 | 57.895 | 0.00 | 0.00 | 41.05 | 3.86 |
1385 | 4665 | 0.954449 | CAGTGCCAGAACTGCTCCAG | 60.954 | 60.000 | 0.00 | 0.00 | 41.05 | 3.86 |
1386 | 4666 | 2.033141 | TGCCAGAACTGCTCCAGC | 59.967 | 61.111 | 0.00 | 0.00 | 42.50 | 4.85 |
1387 | 4667 | 3.123620 | GCCAGAACTGCTCCAGCG | 61.124 | 66.667 | 0.00 | 0.00 | 45.83 | 5.18 |
1388 | 4668 | 3.123620 | CCAGAACTGCTCCAGCGC | 61.124 | 66.667 | 0.00 | 0.00 | 45.83 | 5.92 |
1794 | 5074 | 0.181587 | TCTCCTACTGCCTCCTCTCG | 59.818 | 60.000 | 0.00 | 0.00 | 0.00 | 4.04 |
2211 | 6918 | 3.827898 | GACCTCCCCGAGCTGTCG | 61.828 | 72.222 | 0.00 | 0.00 | 46.39 | 4.35 |
2586 | 7311 | 0.898320 | TCCAAGAGAGTACAGGCAGC | 59.102 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
2608 | 7333 | 3.688136 | CAATGCATGCTCGCTTGC | 58.312 | 55.556 | 20.33 | 19.18 | 44.24 | 4.01 |
2610 | 7335 | 0.457853 | CAATGCATGCTCGCTTGCTT | 60.458 | 50.000 | 24.05 | 17.63 | 44.28 | 3.91 |
2611 | 7336 | 1.097232 | AATGCATGCTCGCTTGCTTA | 58.903 | 45.000 | 24.05 | 10.56 | 44.28 | 3.09 |
2612 | 7337 | 0.379669 | ATGCATGCTCGCTTGCTTAC | 59.620 | 50.000 | 24.05 | 3.24 | 44.28 | 2.34 |
2615 | 7340 | 0.247419 | CATGCTCGCTTGCTTACGTG | 60.247 | 55.000 | 0.00 | 0.00 | 0.00 | 4.49 |
2618 | 7343 | 1.417592 | CTCGCTTGCTTACGTGCTG | 59.582 | 57.895 | 0.00 | 0.00 | 0.00 | 4.41 |
2628 | 7353 | 2.279136 | GCTTACGTGCTGTACTGAATCG | 59.721 | 50.000 | 0.00 | 6.96 | 31.20 | 3.34 |
2694 | 7439 | 0.813210 | GGCAGCTTTCGGATCCAGAG | 60.813 | 60.000 | 13.41 | 7.09 | 0.00 | 3.35 |
2749 | 7505 | 9.628746 | AATTAGCAATAAATAAAAACGAACGGT | 57.371 | 25.926 | 0.00 | 0.00 | 0.00 | 4.83 |
2754 | 7510 | 7.534918 | GCAATAAATAAAAACGAACGGTACTGT | 59.465 | 33.333 | 0.04 | 0.04 | 0.00 | 3.55 |
2758 | 7514 | 0.932399 | AAACGAACGGTACTGTGTGC | 59.068 | 50.000 | 8.42 | 0.39 | 0.00 | 4.57 |
2759 | 7515 | 0.179105 | AACGAACGGTACTGTGTGCA | 60.179 | 50.000 | 8.42 | 0.00 | 0.00 | 4.57 |
2760 | 7516 | 0.872881 | ACGAACGGTACTGTGTGCAC | 60.873 | 55.000 | 10.75 | 10.75 | 0.00 | 4.57 |
2780 | 7536 | 2.285857 | GCACGCGTGTTTGCTTCAC | 61.286 | 57.895 | 36.80 | 15.74 | 35.74 | 3.18 |
2782 | 7538 | 1.817941 | ACGCGTGTTTGCTTCACCT | 60.818 | 52.632 | 12.93 | 0.00 | 32.86 | 4.00 |
2791 | 7547 | 3.128589 | TGTTTGCTTCACCTCTTGTTCAC | 59.871 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
2792 | 7548 | 1.967319 | TGCTTCACCTCTTGTTCACC | 58.033 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2793 | 7549 | 1.239347 | GCTTCACCTCTTGTTCACCC | 58.761 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2794 | 7550 | 1.897560 | CTTCACCTCTTGTTCACCCC | 58.102 | 55.000 | 0.00 | 0.00 | 0.00 | 4.95 |
2795 | 7551 | 0.107831 | TTCACCTCTTGTTCACCCCG | 59.892 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
2796 | 7552 | 1.302511 | CACCTCTTGTTCACCCCGG | 60.303 | 63.158 | 0.00 | 0.00 | 0.00 | 5.73 |
2797 | 7553 | 2.359975 | CCTCTTGTTCACCCCGGC | 60.360 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
2799 | 7555 | 4.323477 | TCTTGTTCACCCCGGCCG | 62.323 | 66.667 | 21.04 | 21.04 | 0.00 | 6.13 |
2826 | 7590 | 0.554305 | ATCCATCCTCCTGCATTGCA | 59.446 | 50.000 | 11.50 | 11.50 | 36.92 | 4.08 |
2831 | 7595 | 0.323999 | TCCTCCTGCATTGCATTGCT | 60.324 | 50.000 | 28.14 | 0.00 | 43.18 | 3.91 |
2842 | 7606 | 2.176273 | GCATTGCTGCTCGATCGGT | 61.176 | 57.895 | 16.41 | 0.00 | 45.32 | 4.69 |
2853 | 7617 | 4.835927 | GATCGGTCGACCATTGCT | 57.164 | 55.556 | 32.80 | 12.71 | 35.14 | 3.91 |
2858 | 7622 | 1.577328 | CGGTCGACCATTGCTTTGCT | 61.577 | 55.000 | 32.80 | 0.00 | 35.14 | 3.91 |
2860 | 7624 | 1.401539 | GGTCGACCATTGCTTTGCTTC | 60.402 | 52.381 | 29.75 | 0.00 | 35.64 | 3.86 |
2861 | 7625 | 1.537202 | GTCGACCATTGCTTTGCTTCT | 59.463 | 47.619 | 3.51 | 0.00 | 0.00 | 2.85 |
2863 | 7627 | 3.002791 | TCGACCATTGCTTTGCTTCTAG | 58.997 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
2864 | 7628 | 2.096496 | CGACCATTGCTTTGCTTCTAGG | 59.904 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2867 | 7631 | 2.821969 | CCATTGCTTTGCTTCTAGGTGT | 59.178 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
2868 | 7632 | 3.366679 | CCATTGCTTTGCTTCTAGGTGTG | 60.367 | 47.826 | 0.00 | 0.00 | 0.00 | 3.82 |
2869 | 7633 | 1.896220 | TGCTTTGCTTCTAGGTGTGG | 58.104 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2870 | 7634 | 0.523519 | GCTTTGCTTCTAGGTGTGGC | 59.476 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2874 | 7638 | 2.231716 | TGCTTCTAGGTGTGGCTAGA | 57.768 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2875 | 7639 | 2.752030 | TGCTTCTAGGTGTGGCTAGAT | 58.248 | 47.619 | 0.00 | 0.00 | 32.92 | 1.98 |
2876 | 7640 | 2.695666 | TGCTTCTAGGTGTGGCTAGATC | 59.304 | 50.000 | 0.00 | 0.00 | 32.92 | 2.75 |
2877 | 7641 | 2.962421 | GCTTCTAGGTGTGGCTAGATCT | 59.038 | 50.000 | 0.00 | 0.00 | 32.92 | 2.75 |
2878 | 7642 | 3.243704 | GCTTCTAGGTGTGGCTAGATCTG | 60.244 | 52.174 | 5.18 | 0.00 | 32.92 | 2.90 |
2879 | 7643 | 3.671740 | TCTAGGTGTGGCTAGATCTGT | 57.328 | 47.619 | 5.18 | 0.00 | 0.00 | 3.41 |
2880 | 7644 | 3.291584 | TCTAGGTGTGGCTAGATCTGTG | 58.708 | 50.000 | 5.18 | 0.00 | 0.00 | 3.66 |
2881 | 7645 | 1.198713 | AGGTGTGGCTAGATCTGTGG | 58.801 | 55.000 | 5.18 | 0.00 | 0.00 | 4.17 |
2882 | 7646 | 1.195115 | GGTGTGGCTAGATCTGTGGA | 58.805 | 55.000 | 5.18 | 0.00 | 0.00 | 4.02 |
2883 | 7647 | 1.555075 | GGTGTGGCTAGATCTGTGGAA | 59.445 | 52.381 | 5.18 | 0.00 | 0.00 | 3.53 |
2884 | 7648 | 2.622436 | GTGTGGCTAGATCTGTGGAAC | 58.378 | 52.381 | 5.18 | 0.00 | 37.35 | 3.62 |
2885 | 7649 | 1.555075 | TGTGGCTAGATCTGTGGAACC | 59.445 | 52.381 | 5.18 | 0.00 | 34.36 | 3.62 |
2886 | 7650 | 1.555075 | GTGGCTAGATCTGTGGAACCA | 59.445 | 52.381 | 5.18 | 0.97 | 34.36 | 3.67 |
2887 | 7651 | 2.027192 | GTGGCTAGATCTGTGGAACCAA | 60.027 | 50.000 | 5.18 | 0.00 | 34.36 | 3.67 |
2888 | 7652 | 2.027192 | TGGCTAGATCTGTGGAACCAAC | 60.027 | 50.000 | 5.18 | 0.00 | 34.36 | 3.77 |
2889 | 7653 | 2.271800 | GCTAGATCTGTGGAACCAACG | 58.728 | 52.381 | 5.18 | 0.00 | 34.36 | 4.10 |
2890 | 7654 | 2.271800 | CTAGATCTGTGGAACCAACGC | 58.728 | 52.381 | 5.18 | 0.00 | 34.36 | 4.84 |
2891 | 7655 | 0.687354 | AGATCTGTGGAACCAACGCT | 59.313 | 50.000 | 0.00 | 0.00 | 34.36 | 5.07 |
2892 | 7656 | 1.079503 | GATCTGTGGAACCAACGCTC | 58.920 | 55.000 | 0.00 | 0.00 | 34.36 | 5.03 |
2893 | 7657 | 0.670546 | ATCTGTGGAACCAACGCTCG | 60.671 | 55.000 | 0.00 | 0.00 | 34.36 | 5.03 |
2894 | 7658 | 2.954753 | CTGTGGAACCAACGCTCGC | 61.955 | 63.158 | 0.00 | 0.00 | 34.36 | 5.03 |
2895 | 7659 | 2.665185 | GTGGAACCAACGCTCGCT | 60.665 | 61.111 | 0.00 | 0.00 | 0.00 | 4.93 |
2896 | 7660 | 2.357034 | TGGAACCAACGCTCGCTC | 60.357 | 61.111 | 0.00 | 0.00 | 0.00 | 5.03 |
2897 | 7661 | 2.357034 | GGAACCAACGCTCGCTCA | 60.357 | 61.111 | 0.00 | 0.00 | 0.00 | 4.26 |
2898 | 7662 | 1.959226 | GGAACCAACGCTCGCTCAA | 60.959 | 57.895 | 0.00 | 0.00 | 0.00 | 3.02 |
2899 | 7663 | 1.493311 | GAACCAACGCTCGCTCAAG | 59.507 | 57.895 | 0.00 | 0.00 | 0.00 | 3.02 |
2900 | 7664 | 1.222115 | GAACCAACGCTCGCTCAAGT | 61.222 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2901 | 7665 | 1.498865 | AACCAACGCTCGCTCAAGTG | 61.499 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2902 | 7666 | 1.664649 | CCAACGCTCGCTCAAGTGA | 60.665 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
2903 | 7667 | 1.488957 | CAACGCTCGCTCAAGTGAC | 59.511 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
2904 | 7668 | 1.067416 | AACGCTCGCTCAAGTGACA | 59.933 | 52.632 | 0.00 | 0.00 | 0.00 | 3.58 |
2905 | 7669 | 0.941463 | AACGCTCGCTCAAGTGACAG | 60.941 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2906 | 7670 | 1.081175 | CGCTCGCTCAAGTGACAGA | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
2907 | 7671 | 0.664466 | CGCTCGCTCAAGTGACAGAA | 60.664 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2908 | 7672 | 1.719600 | GCTCGCTCAAGTGACAGAAT | 58.280 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
2909 | 7673 | 2.732282 | CGCTCGCTCAAGTGACAGAATA | 60.732 | 50.000 | 0.00 | 0.00 | 0.00 | 1.75 |
2910 | 7674 | 3.452474 | GCTCGCTCAAGTGACAGAATAT | 58.548 | 45.455 | 0.00 | 0.00 | 0.00 | 1.28 |
2911 | 7675 | 4.611943 | GCTCGCTCAAGTGACAGAATATA | 58.388 | 43.478 | 0.00 | 0.00 | 0.00 | 0.86 |
2912 | 7676 | 4.442733 | GCTCGCTCAAGTGACAGAATATAC | 59.557 | 45.833 | 0.00 | 0.00 | 0.00 | 1.47 |
2913 | 7677 | 5.576447 | TCGCTCAAGTGACAGAATATACA | 57.424 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
2914 | 7678 | 5.961272 | TCGCTCAAGTGACAGAATATACAA | 58.039 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
2915 | 7679 | 6.394809 | TCGCTCAAGTGACAGAATATACAAA | 58.605 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2916 | 7680 | 6.871492 | TCGCTCAAGTGACAGAATATACAAAA | 59.129 | 34.615 | 0.00 | 0.00 | 0.00 | 2.44 |
2917 | 7681 | 7.386573 | TCGCTCAAGTGACAGAATATACAAAAA | 59.613 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
2952 | 7716 | 9.582431 | TGAAACCAAAACATTAAATTTACACGA | 57.418 | 25.926 | 0.00 | 0.00 | 0.00 | 4.35 |
2956 | 7720 | 9.974980 | ACCAAAACATTAAATTTACACGAATCT | 57.025 | 25.926 | 0.00 | 0.00 | 0.00 | 2.40 |
2961 | 7725 | 8.874745 | ACATTAAATTTACACGAATCTTCACG | 57.125 | 30.769 | 0.00 | 0.00 | 0.00 | 4.35 |
2962 | 7726 | 8.500773 | ACATTAAATTTACACGAATCTTCACGT | 58.499 | 29.630 | 0.00 | 0.00 | 43.50 | 4.49 |
2963 | 7727 | 9.961266 | CATTAAATTTACACGAATCTTCACGTA | 57.039 | 29.630 | 0.00 | 0.00 | 40.76 | 3.57 |
2975 | 7739 | 4.492791 | TCTTCACGTAAGATGTCGTCAA | 57.507 | 40.909 | 0.00 | 0.00 | 39.36 | 3.18 |
2976 | 7740 | 5.055642 | TCTTCACGTAAGATGTCGTCAAT | 57.944 | 39.130 | 0.00 | 0.00 | 39.36 | 2.57 |
2977 | 7741 | 6.185852 | TCTTCACGTAAGATGTCGTCAATA | 57.814 | 37.500 | 0.00 | 0.00 | 39.36 | 1.90 |
2978 | 7742 | 6.792326 | TCTTCACGTAAGATGTCGTCAATAT | 58.208 | 36.000 | 0.00 | 0.00 | 39.36 | 1.28 |
2979 | 7743 | 7.922837 | TCTTCACGTAAGATGTCGTCAATATA | 58.077 | 34.615 | 0.00 | 0.00 | 39.36 | 0.86 |
2980 | 7744 | 8.068380 | TCTTCACGTAAGATGTCGTCAATATAG | 58.932 | 37.037 | 0.00 | 0.00 | 39.36 | 1.31 |
2981 | 7745 | 6.665465 | TCACGTAAGATGTCGTCAATATAGG | 58.335 | 40.000 | 0.00 | 0.00 | 38.23 | 2.57 |
2982 | 7746 | 5.856986 | CACGTAAGATGTCGTCAATATAGGG | 59.143 | 44.000 | 0.00 | 0.00 | 38.23 | 3.53 |
2983 | 7747 | 5.533903 | ACGTAAGATGTCGTCAATATAGGGT | 59.466 | 40.000 | 0.00 | 0.00 | 43.62 | 4.34 |
2984 | 7748 | 6.084925 | CGTAAGATGTCGTCAATATAGGGTC | 58.915 | 44.000 | 0.00 | 0.00 | 43.02 | 4.46 |
2985 | 7749 | 6.072618 | CGTAAGATGTCGTCAATATAGGGTCT | 60.073 | 42.308 | 0.00 | 0.00 | 43.02 | 3.85 |
2986 | 7750 | 7.118825 | CGTAAGATGTCGTCAATATAGGGTCTA | 59.881 | 40.741 | 0.00 | 0.00 | 43.02 | 2.59 |
2987 | 7751 | 7.455641 | AAGATGTCGTCAATATAGGGTCTAG | 57.544 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2988 | 7752 | 6.544650 | AGATGTCGTCAATATAGGGTCTAGT | 58.455 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2989 | 7753 | 6.655848 | AGATGTCGTCAATATAGGGTCTAGTC | 59.344 | 42.308 | 0.00 | 0.00 | 0.00 | 2.59 |
2990 | 7754 | 4.753610 | TGTCGTCAATATAGGGTCTAGTCG | 59.246 | 45.833 | 0.00 | 0.00 | 0.00 | 4.18 |
2991 | 7755 | 4.993584 | GTCGTCAATATAGGGTCTAGTCGA | 59.006 | 45.833 | 0.00 | 0.00 | 0.00 | 4.20 |
2992 | 7756 | 4.993584 | TCGTCAATATAGGGTCTAGTCGAC | 59.006 | 45.833 | 7.70 | 7.70 | 42.07 | 4.20 |
2993 | 7757 | 4.996122 | CGTCAATATAGGGTCTAGTCGACT | 59.004 | 45.833 | 23.66 | 23.66 | 42.44 | 4.18 |
2994 | 7758 | 5.107026 | CGTCAATATAGGGTCTAGTCGACTG | 60.107 | 48.000 | 28.12 | 17.05 | 42.44 | 3.51 |
2995 | 7759 | 5.996513 | GTCAATATAGGGTCTAGTCGACTGA | 59.003 | 44.000 | 28.12 | 18.99 | 42.44 | 3.41 |
2996 | 7760 | 6.655848 | GTCAATATAGGGTCTAGTCGACTGAT | 59.344 | 42.308 | 28.12 | 10.65 | 42.44 | 2.90 |
2997 | 7761 | 7.823310 | GTCAATATAGGGTCTAGTCGACTGATA | 59.177 | 40.741 | 28.12 | 10.13 | 42.44 | 2.15 |
2998 | 7762 | 8.549731 | TCAATATAGGGTCTAGTCGACTGATAT | 58.450 | 37.037 | 28.12 | 17.20 | 42.44 | 1.63 |
2999 | 7763 | 9.179909 | CAATATAGGGTCTAGTCGACTGATATT | 57.820 | 37.037 | 28.12 | 18.15 | 42.44 | 1.28 |
3000 | 7764 | 9.756571 | AATATAGGGTCTAGTCGACTGATATTT | 57.243 | 33.333 | 28.12 | 11.72 | 42.44 | 1.40 |
3002 | 7766 | 8.795842 | ATAGGGTCTAGTCGACTGATATTTAG | 57.204 | 38.462 | 28.12 | 15.02 | 42.44 | 1.85 |
3003 | 7767 | 5.474189 | AGGGTCTAGTCGACTGATATTTAGC | 59.526 | 44.000 | 28.12 | 13.11 | 42.44 | 3.09 |
3004 | 7768 | 5.383958 | GGTCTAGTCGACTGATATTTAGCG | 58.616 | 45.833 | 28.12 | 3.66 | 42.44 | 4.26 |
3005 | 7769 | 5.178996 | GGTCTAGTCGACTGATATTTAGCGA | 59.821 | 44.000 | 28.12 | 2.07 | 42.44 | 4.93 |
3006 | 7770 | 6.128227 | GGTCTAGTCGACTGATATTTAGCGAT | 60.128 | 42.308 | 28.12 | 0.00 | 42.44 | 4.58 |
3007 | 7771 | 6.957077 | GTCTAGTCGACTGATATTTAGCGATC | 59.043 | 42.308 | 28.12 | 3.83 | 39.61 | 3.69 |
3008 | 7772 | 5.049398 | AGTCGACTGATATTTAGCGATCC | 57.951 | 43.478 | 19.30 | 0.00 | 0.00 | 3.36 |
3009 | 7773 | 4.082679 | AGTCGACTGATATTTAGCGATCCC | 60.083 | 45.833 | 19.30 | 0.00 | 0.00 | 3.85 |
3010 | 7774 | 3.192844 | TCGACTGATATTTAGCGATCCCC | 59.807 | 47.826 | 0.00 | 0.00 | 0.00 | 4.81 |
3011 | 7775 | 3.193691 | CGACTGATATTTAGCGATCCCCT | 59.806 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
3012 | 7776 | 4.322049 | CGACTGATATTTAGCGATCCCCTT | 60.322 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 |
3013 | 7777 | 5.552178 | GACTGATATTTAGCGATCCCCTTT | 58.448 | 41.667 | 0.00 | 0.00 | 0.00 | 3.11 |
3014 | 7778 | 5.308825 | ACTGATATTTAGCGATCCCCTTTG | 58.691 | 41.667 | 0.00 | 0.00 | 0.00 | 2.77 |
3015 | 7779 | 4.072131 | TGATATTTAGCGATCCCCTTTGC | 58.928 | 43.478 | 0.00 | 0.00 | 0.00 | 3.68 |
3016 | 7780 | 2.736670 | ATTTAGCGATCCCCTTTGCT | 57.263 | 45.000 | 0.00 | 0.00 | 39.67 | 3.91 |
3017 | 7781 | 2.507407 | TTTAGCGATCCCCTTTGCTT | 57.493 | 45.000 | 0.00 | 0.00 | 37.52 | 3.91 |
3018 | 7782 | 2.507407 | TTAGCGATCCCCTTTGCTTT | 57.493 | 45.000 | 0.00 | 0.00 | 37.52 | 3.51 |
3019 | 7783 | 2.038387 | TAGCGATCCCCTTTGCTTTC | 57.962 | 50.000 | 0.00 | 0.00 | 37.52 | 2.62 |
3020 | 7784 | 0.329596 | AGCGATCCCCTTTGCTTTCT | 59.670 | 50.000 | 0.00 | 0.00 | 32.17 | 2.52 |
3021 | 7785 | 1.177401 | GCGATCCCCTTTGCTTTCTT | 58.823 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3022 | 7786 | 1.546029 | GCGATCCCCTTTGCTTTCTTT | 59.454 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
3023 | 7787 | 2.416027 | GCGATCCCCTTTGCTTTCTTTC | 60.416 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
3024 | 7788 | 3.084786 | CGATCCCCTTTGCTTTCTTTCT | 58.915 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
3030 | 7794 | 3.507622 | CCCTTTGCTTTCTTTCTAGGTGG | 59.492 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
3043 | 7807 | 5.407407 | TTCTAGGTGGAAGAAAGTAGCAG | 57.593 | 43.478 | 0.00 | 0.00 | 30.15 | 4.24 |
3044 | 7808 | 3.769844 | TCTAGGTGGAAGAAAGTAGCAGG | 59.230 | 47.826 | 0.00 | 0.00 | 0.00 | 4.85 |
3047 | 7811 | 2.239907 | GGTGGAAGAAAGTAGCAGGGAT | 59.760 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3048 | 7812 | 3.454812 | GGTGGAAGAAAGTAGCAGGGATA | 59.545 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
3050 | 7814 | 4.406003 | GTGGAAGAAAGTAGCAGGGATAGA | 59.594 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
3051 | 7815 | 5.030147 | TGGAAGAAAGTAGCAGGGATAGAA | 58.970 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
3052 | 7816 | 5.487488 | TGGAAGAAAGTAGCAGGGATAGAAA | 59.513 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3053 | 7817 | 5.818336 | GGAAGAAAGTAGCAGGGATAGAAAC | 59.182 | 44.000 | 0.00 | 0.00 | 0.00 | 2.78 |
3054 | 7818 | 6.374417 | AAGAAAGTAGCAGGGATAGAAACA | 57.626 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
3055 | 7819 | 5.735766 | AGAAAGTAGCAGGGATAGAAACAC | 58.264 | 41.667 | 0.00 | 0.00 | 0.00 | 3.32 |
3056 | 7820 | 5.248477 | AGAAAGTAGCAGGGATAGAAACACA | 59.752 | 40.000 | 0.00 | 0.00 | 0.00 | 3.72 |
3057 | 7821 | 4.744795 | AGTAGCAGGGATAGAAACACAG | 57.255 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
3058 | 7822 | 3.452627 | AGTAGCAGGGATAGAAACACAGG | 59.547 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
3059 | 7823 | 1.561542 | AGCAGGGATAGAAACACAGGG | 59.438 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
3060 | 7824 | 1.559682 | GCAGGGATAGAAACACAGGGA | 59.440 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
3061 | 7825 | 2.681097 | GCAGGGATAGAAACACAGGGAC | 60.681 | 54.545 | 0.00 | 0.00 | 0.00 | 4.46 |
3062 | 7826 | 1.831736 | AGGGATAGAAACACAGGGACG | 59.168 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
3063 | 7827 | 1.134491 | GGGATAGAAACACAGGGACGG | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
3064 | 7828 | 1.553704 | GGATAGAAACACAGGGACGGT | 59.446 | 52.381 | 0.00 | 0.00 | 37.10 | 4.83 |
3071 | 7835 | 3.483587 | ACAGGGACGGTGCTCAAT | 58.516 | 55.556 | 0.00 | 0.00 | 33.98 | 2.57 |
3072 | 7836 | 1.296715 | ACAGGGACGGTGCTCAATC | 59.703 | 57.895 | 0.00 | 0.00 | 33.98 | 2.67 |
3073 | 7837 | 1.194781 | ACAGGGACGGTGCTCAATCT | 61.195 | 55.000 | 0.00 | 0.00 | 33.98 | 2.40 |
3074 | 7838 | 0.742281 | CAGGGACGGTGCTCAATCTG | 60.742 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3081 | 7845 | 1.267806 | CGGTGCTCAATCTGCTTTTGT | 59.732 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
3117 | 7881 | 2.860009 | AGATGGATCGATTTGCATGCT | 58.140 | 42.857 | 20.33 | 0.00 | 0.00 | 3.79 |
3118 | 7882 | 3.220110 | AGATGGATCGATTTGCATGCTT | 58.780 | 40.909 | 20.33 | 3.46 | 0.00 | 3.91 |
3120 | 7884 | 3.153676 | TGGATCGATTTGCATGCTTTG | 57.846 | 42.857 | 20.33 | 7.90 | 0.00 | 2.77 |
3121 | 7885 | 2.159212 | TGGATCGATTTGCATGCTTTGG | 60.159 | 45.455 | 20.33 | 5.10 | 0.00 | 3.28 |
3122 | 7886 | 2.466846 | GATCGATTTGCATGCTTTGGG | 58.533 | 47.619 | 20.33 | 5.79 | 0.00 | 4.12 |
3186 | 8092 | 7.221450 | AGTTAATCAAGCTTGTACTGTTGGTA | 58.779 | 34.615 | 25.19 | 2.96 | 0.00 | 3.25 |
3228 | 8134 | 2.484889 | GGAATGTCCGTGGAGCTAATC | 58.515 | 52.381 | 0.00 | 0.00 | 0.00 | 1.75 |
3246 | 8157 | 6.807708 | CTAATCAAGCTTTGTCGTACGTAT | 57.192 | 37.500 | 16.05 | 0.00 | 0.00 | 3.06 |
3272 | 8186 | 3.158676 | TGGTTGCTGGGTGTTTAATACC | 58.841 | 45.455 | 2.05 | 2.05 | 37.48 | 2.73 |
3282 | 8196 | 5.425196 | GGTGTTTAATACCCTCACCTACA | 57.575 | 43.478 | 0.00 | 0.00 | 43.34 | 2.74 |
3300 | 8214 | 5.665812 | ACCTACAAGAATTAGATGCCCTGTA | 59.334 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3301 | 8215 | 5.992217 | CCTACAAGAATTAGATGCCCTGTAC | 59.008 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3302 | 8216 | 4.442706 | ACAAGAATTAGATGCCCTGTACG | 58.557 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
3303 | 8217 | 4.081087 | ACAAGAATTAGATGCCCTGTACGT | 60.081 | 41.667 | 0.00 | 0.00 | 0.00 | 3.57 |
3420 | 8334 | 2.046507 | GCTGCTACCTGCTGTGCT | 60.047 | 61.111 | 0.00 | 0.00 | 43.37 | 4.40 |
3421 | 8335 | 2.396955 | GCTGCTACCTGCTGTGCTG | 61.397 | 63.158 | 0.00 | 0.00 | 43.37 | 4.41 |
3422 | 8336 | 2.359107 | TGCTACCTGCTGTGCTGC | 60.359 | 61.111 | 0.00 | 0.00 | 43.37 | 5.25 |
3423 | 8337 | 3.130160 | GCTACCTGCTGTGCTGCC | 61.130 | 66.667 | 0.00 | 0.00 | 38.95 | 4.85 |
3424 | 8338 | 2.816958 | CTACCTGCTGTGCTGCCG | 60.817 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
3431 | 8345 | 3.782244 | CTGTGCTGCCGCTCGTTC | 61.782 | 66.667 | 0.70 | 0.00 | 36.97 | 3.95 |
3432 | 8346 | 4.600576 | TGTGCTGCCGCTCGTTCA | 62.601 | 61.111 | 0.70 | 0.00 | 36.97 | 3.18 |
3433 | 8347 | 3.345808 | GTGCTGCCGCTCGTTCAA | 61.346 | 61.111 | 0.70 | 0.00 | 36.97 | 2.69 |
3466 | 8380 | 0.883370 | CTCCTTATTTACGGCCCGCC | 60.883 | 60.000 | 1.23 | 0.00 | 0.00 | 6.13 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
37 | 38 | 6.105333 | TCACACCACCAAAATCAAGAAAAAG | 58.895 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
53 | 54 | 2.210116 | AGTCACAACGAATCACACCAC | 58.790 | 47.619 | 0.00 | 0.00 | 0.00 | 4.16 |
57 | 58 | 6.238266 | GGTCTTTAAAGTCACAACGAATCACA | 60.238 | 38.462 | 14.74 | 0.00 | 0.00 | 3.58 |
89 | 90 | 5.353123 | ACAAAGTCTTTCTACAACTCGCAAA | 59.647 | 36.000 | 0.00 | 0.00 | 0.00 | 3.68 |
90 | 91 | 4.873827 | ACAAAGTCTTTCTACAACTCGCAA | 59.126 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
91 | 92 | 4.270084 | CACAAAGTCTTTCTACAACTCGCA | 59.730 | 41.667 | 0.00 | 0.00 | 0.00 | 5.10 |
92 | 93 | 4.318831 | CCACAAAGTCTTTCTACAACTCGC | 60.319 | 45.833 | 0.00 | 0.00 | 0.00 | 5.03 |
93 | 94 | 4.809426 | ACCACAAAGTCTTTCTACAACTCG | 59.191 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
94 | 95 | 6.509677 | CGAACCACAAAGTCTTTCTACAACTC | 60.510 | 42.308 | 0.00 | 0.00 | 0.00 | 3.01 |
95 | 96 | 5.293569 | CGAACCACAAAGTCTTTCTACAACT | 59.706 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
96 | 97 | 5.292589 | TCGAACCACAAAGTCTTTCTACAAC | 59.707 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
97 | 98 | 5.421277 | TCGAACCACAAAGTCTTTCTACAA | 58.579 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
98 | 99 | 5.013568 | TCGAACCACAAAGTCTTTCTACA | 57.986 | 39.130 | 0.00 | 0.00 | 0.00 | 2.74 |
99 | 100 | 5.694910 | TCATCGAACCACAAAGTCTTTCTAC | 59.305 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
100 | 101 | 5.694910 | GTCATCGAACCACAAAGTCTTTCTA | 59.305 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
101 | 102 | 4.511826 | GTCATCGAACCACAAAGTCTTTCT | 59.488 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
108 | 109 | 6.516718 | AGATATAGGTCATCGAACCACAAAG | 58.483 | 40.000 | 8.93 | 0.00 | 42.12 | 2.77 |
114 | 115 | 4.158764 | CCTGGAGATATAGGTCATCGAACC | 59.841 | 50.000 | 0.00 | 0.00 | 39.80 | 3.62 |
121 | 122 | 3.932562 | AGATCCCCTGGAGATATAGGTCA | 59.067 | 47.826 | 0.00 | 0.00 | 34.05 | 4.02 |
122 | 123 | 4.285863 | CAGATCCCCTGGAGATATAGGTC | 58.714 | 52.174 | 0.00 | 0.00 | 39.23 | 3.85 |
134 | 135 | 2.381911 | CATCCAAAACCAGATCCCCTG | 58.618 | 52.381 | 0.00 | 0.00 | 42.55 | 4.45 |
143 | 144 | 1.181786 | GAATCGCCCATCCAAAACCA | 58.818 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
144 | 145 | 1.181786 | TGAATCGCCCATCCAAAACC | 58.818 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
145 | 146 | 2.491693 | TCTTGAATCGCCCATCCAAAAC | 59.508 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
146 | 147 | 2.754552 | CTCTTGAATCGCCCATCCAAAA | 59.245 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
148 | 149 | 1.408683 | CCTCTTGAATCGCCCATCCAA | 60.409 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
149 | 150 | 0.181114 | CCTCTTGAATCGCCCATCCA | 59.819 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
150 | 151 | 0.181350 | ACCTCTTGAATCGCCCATCC | 59.819 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
151 | 152 | 2.044123 | AACCTCTTGAATCGCCCATC | 57.956 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
152 | 153 | 2.025887 | AGAAACCTCTTGAATCGCCCAT | 60.026 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
153 | 154 | 1.351017 | AGAAACCTCTTGAATCGCCCA | 59.649 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
154 | 155 | 2.115343 | AGAAACCTCTTGAATCGCCC | 57.885 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
156 | 157 | 5.391449 | GGTTTTAGAAACCTCTTGAATCGC | 58.609 | 41.667 | 13.83 | 0.00 | 37.34 | 4.58 |
167 | 168 | 8.315391 | ACGTACTTTCATAGGTTTTAGAAACC | 57.685 | 34.615 | 13.36 | 13.36 | 40.58 | 3.27 |
170 | 171 | 9.846248 | GACTACGTACTTTCATAGGTTTTAGAA | 57.154 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
171 | 172 | 9.013229 | TGACTACGTACTTTCATAGGTTTTAGA | 57.987 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
172 | 173 | 9.630098 | TTGACTACGTACTTTCATAGGTTTTAG | 57.370 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
174 | 175 | 9.498176 | AATTGACTACGTACTTTCATAGGTTTT | 57.502 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
176 | 177 | 9.798994 | CTAATTGACTACGTACTTTCATAGGTT | 57.201 | 33.333 | 0.00 | 0.00 | 0.00 | 3.50 |
177 | 178 | 8.964772 | ACTAATTGACTACGTACTTTCATAGGT | 58.035 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
178 | 179 | 9.234384 | CACTAATTGACTACGTACTTTCATAGG | 57.766 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
180 | 181 | 8.245491 | TGCACTAATTGACTACGTACTTTCATA | 58.755 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
182 | 183 | 6.448852 | TGCACTAATTGACTACGTACTTTCA | 58.551 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
183 | 184 | 6.034683 | CCTGCACTAATTGACTACGTACTTTC | 59.965 | 42.308 | 0.00 | 0.00 | 0.00 | 2.62 |
184 | 185 | 5.867716 | CCTGCACTAATTGACTACGTACTTT | 59.132 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
185 | 186 | 5.047519 | ACCTGCACTAATTGACTACGTACTT | 60.048 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
186 | 187 | 4.461781 | ACCTGCACTAATTGACTACGTACT | 59.538 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
188 | 189 | 4.740268 | CACCTGCACTAATTGACTACGTA | 58.260 | 43.478 | 0.00 | 0.00 | 0.00 | 3.57 |
189 | 190 | 3.585862 | CACCTGCACTAATTGACTACGT | 58.414 | 45.455 | 0.00 | 0.00 | 0.00 | 3.57 |
230 | 1948 | 1.817099 | GCACTTCGATCCAGCCAGG | 60.817 | 63.158 | 0.00 | 0.00 | 39.47 | 4.45 |
231 | 1949 | 0.461548 | TAGCACTTCGATCCAGCCAG | 59.538 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
269 | 1987 | 2.296190 | GAGGCGGGAAGTGACAATTTTT | 59.704 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
294 | 2012 | 2.814336 | GCCGTCCTTGTCTTCAGAATTT | 59.186 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
312 | 2030 | 2.274437 | CGAATCCATATCCAGATGCCG | 58.726 | 52.381 | 0.00 | 0.00 | 0.00 | 5.69 |
313 | 2031 | 2.636830 | CCGAATCCATATCCAGATGCC | 58.363 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
353 | 2082 | 1.031571 | GGCCTCCGTGAAATCATGCA | 61.032 | 55.000 | 0.00 | 0.00 | 0.00 | 3.96 |
366 | 2096 | 1.527370 | GTACACCATGAGGGCCTCC | 59.473 | 63.158 | 30.03 | 13.12 | 42.05 | 4.30 |
374 | 2104 | 4.334552 | TCAACTAGGTACGTACACCATGA | 58.665 | 43.478 | 26.02 | 18.58 | 41.40 | 3.07 |
377 | 2107 | 3.084039 | CCTCAACTAGGTACGTACACCA | 58.916 | 50.000 | 26.02 | 10.03 | 41.40 | 4.17 |
396 | 2143 | 2.041301 | TACCTACCATGCCCGCCT | 60.041 | 61.111 | 0.00 | 0.00 | 0.00 | 5.52 |
477 | 2398 | 1.626654 | CTCATGCGTGTGAACGGGAC | 61.627 | 60.000 | 5.68 | 0.00 | 0.00 | 4.46 |
513 | 2448 | 1.561542 | TCATGAGGAAGGAAGGAAGGC | 59.438 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
514 | 2449 | 4.307032 | TTTCATGAGGAAGGAAGGAAGG | 57.693 | 45.455 | 0.00 | 0.00 | 36.72 | 3.46 |
515 | 2450 | 5.564550 | TCTTTTCATGAGGAAGGAAGGAAG | 58.435 | 41.667 | 16.37 | 3.25 | 36.72 | 3.46 |
516 | 2451 | 5.582950 | TCTTTTCATGAGGAAGGAAGGAA | 57.417 | 39.130 | 16.37 | 0.00 | 36.72 | 3.36 |
518 | 2453 | 5.564550 | TCTTCTTTTCATGAGGAAGGAAGG | 58.435 | 41.667 | 22.15 | 10.86 | 41.78 | 3.46 |
543 | 2479 | 2.940410 | GTGTTGACGTCCAGGAAAGAAA | 59.060 | 45.455 | 14.12 | 0.00 | 0.00 | 2.52 |
546 | 2482 | 1.867233 | CAGTGTTGACGTCCAGGAAAG | 59.133 | 52.381 | 14.12 | 0.00 | 0.00 | 2.62 |
547 | 2483 | 1.948104 | CAGTGTTGACGTCCAGGAAA | 58.052 | 50.000 | 14.12 | 0.00 | 0.00 | 3.13 |
549 | 2485 | 1.069090 | GCAGTGTTGACGTCCAGGA | 59.931 | 57.895 | 14.12 | 0.00 | 0.00 | 3.86 |
551 | 2487 | 2.310233 | CCGCAGTGTTGACGTCCAG | 61.310 | 63.158 | 14.12 | 0.00 | 0.00 | 3.86 |
552 | 2488 | 2.279851 | CCGCAGTGTTGACGTCCA | 60.280 | 61.111 | 14.12 | 0.00 | 0.00 | 4.02 |
553 | 2489 | 2.022129 | CTCCGCAGTGTTGACGTCC | 61.022 | 63.158 | 14.12 | 0.00 | 0.00 | 4.79 |
555 | 2491 | 2.661866 | GCTCCGCAGTGTTGACGT | 60.662 | 61.111 | 0.00 | 0.00 | 0.00 | 4.34 |
855 | 4113 | 1.669927 | GGGAGGGAGGGAGGATGAGA | 61.670 | 65.000 | 0.00 | 0.00 | 0.00 | 3.27 |
856 | 4114 | 1.152139 | GGGAGGGAGGGAGGATGAG | 60.152 | 68.421 | 0.00 | 0.00 | 0.00 | 2.90 |
857 | 4115 | 1.630333 | AGGGAGGGAGGGAGGATGA | 60.630 | 63.158 | 0.00 | 0.00 | 0.00 | 2.92 |
1048 | 4322 | 2.896443 | GAGGAGAGGGGCGACAAG | 59.104 | 66.667 | 0.00 | 0.00 | 0.00 | 3.16 |
1356 | 4636 | 1.656587 | TCTGGCACTGGTAGTTGGAT | 58.343 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1769 | 5049 | 1.903183 | GGAGGCAGTAGGAGAACTTGT | 59.097 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
1863 | 5143 | 3.006706 | GCGTACTGCATCGCCTTC | 58.993 | 61.111 | 16.41 | 0.00 | 45.54 | 3.46 |
2571 | 7293 | 0.829333 | CATGGCTGCCTGTACTCTCT | 59.171 | 55.000 | 21.03 | 0.00 | 0.00 | 3.10 |
2592 | 7317 | 1.097232 | TAAGCAAGCGAGCATGCATT | 58.903 | 45.000 | 23.98 | 17.19 | 42.32 | 3.56 |
2593 | 7318 | 0.379669 | GTAAGCAAGCGAGCATGCAT | 59.620 | 50.000 | 23.98 | 16.30 | 42.32 | 3.96 |
2594 | 7319 | 1.796151 | GTAAGCAAGCGAGCATGCA | 59.204 | 52.632 | 23.98 | 4.83 | 42.32 | 3.96 |
2595 | 7320 | 1.297158 | CGTAAGCAAGCGAGCATGC | 60.297 | 57.895 | 16.26 | 16.26 | 40.47 | 4.06 |
2596 | 7321 | 0.247419 | CACGTAAGCAAGCGAGCATG | 60.247 | 55.000 | 6.21 | 0.00 | 45.62 | 4.06 |
2597 | 7322 | 1.970917 | GCACGTAAGCAAGCGAGCAT | 61.971 | 55.000 | 6.21 | 0.00 | 42.48 | 3.79 |
2598 | 7323 | 2.667318 | GCACGTAAGCAAGCGAGCA | 61.667 | 57.895 | 6.21 | 0.00 | 42.48 | 4.26 |
2599 | 7324 | 2.096594 | GCACGTAAGCAAGCGAGC | 59.903 | 61.111 | 0.00 | 1.33 | 45.62 | 5.03 |
2600 | 7325 | 1.284982 | ACAGCACGTAAGCAAGCGAG | 61.285 | 55.000 | 0.36 | 0.00 | 45.62 | 5.03 |
2602 | 7327 | 0.093026 | GTACAGCACGTAAGCAAGCG | 59.907 | 55.000 | 0.36 | 0.00 | 45.62 | 4.68 |
2603 | 7328 | 1.126846 | CAGTACAGCACGTAAGCAAGC | 59.873 | 52.381 | 0.36 | 0.00 | 45.62 | 4.01 |
2604 | 7329 | 2.672714 | TCAGTACAGCACGTAAGCAAG | 58.327 | 47.619 | 0.36 | 0.00 | 45.62 | 4.01 |
2606 | 7331 | 2.804697 | TTCAGTACAGCACGTAAGCA | 57.195 | 45.000 | 0.36 | 0.00 | 45.62 | 3.91 |
2607 | 7332 | 2.279136 | CGATTCAGTACAGCACGTAAGC | 59.721 | 50.000 | 0.00 | 0.00 | 45.62 | 3.09 |
2610 | 7335 | 3.835378 | TTCGATTCAGTACAGCACGTA | 57.165 | 42.857 | 0.00 | 0.00 | 0.00 | 3.57 |
2611 | 7336 | 2.717580 | TTCGATTCAGTACAGCACGT | 57.282 | 45.000 | 0.00 | 0.00 | 0.00 | 4.49 |
2612 | 7337 | 2.535984 | GGATTCGATTCAGTACAGCACG | 59.464 | 50.000 | 9.36 | 0.00 | 0.00 | 5.34 |
2615 | 7340 | 3.553511 | CACTGGATTCGATTCAGTACAGC | 59.446 | 47.826 | 13.10 | 0.00 | 39.43 | 4.40 |
2618 | 7343 | 4.386867 | TCCACTGGATTCGATTCAGTAC | 57.613 | 45.455 | 13.10 | 0.00 | 39.43 | 2.73 |
2628 | 7353 | 5.763204 | TGTCACTAACTTTTCCACTGGATTC | 59.237 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2694 | 7439 | 1.069227 | CAAATCTAATAAGCGCGGGGC | 60.069 | 52.381 | 8.83 | 9.26 | 44.05 | 5.80 |
2741 | 7497 | 0.872881 | GTGCACACAGTACCGTTCGT | 60.873 | 55.000 | 13.17 | 0.00 | 0.00 | 3.85 |
2758 | 7514 | 2.918163 | AAGCAAACACGCGTGCAGTG | 62.918 | 55.000 | 37.35 | 30.12 | 43.42 | 3.66 |
2759 | 7515 | 2.646799 | GAAGCAAACACGCGTGCAGT | 62.647 | 55.000 | 37.35 | 21.06 | 43.42 | 4.40 |
2760 | 7516 | 2.005537 | GAAGCAAACACGCGTGCAG | 61.006 | 57.895 | 37.35 | 26.80 | 43.42 | 4.41 |
2780 | 7536 | 2.359975 | GCCGGGGTGAACAAGAGG | 60.360 | 66.667 | 2.18 | 0.00 | 0.00 | 3.69 |
2782 | 7538 | 4.323477 | CGGCCGGGGTGAACAAGA | 62.323 | 66.667 | 20.10 | 0.00 | 0.00 | 3.02 |
2796 | 7552 | 4.688966 | GATGGATCCTCGCCCGGC | 62.689 | 72.222 | 14.23 | 0.00 | 0.00 | 6.13 |
2797 | 7553 | 4.008933 | GGATGGATCCTCGCCCGG | 62.009 | 72.222 | 14.23 | 0.00 | 43.73 | 5.73 |
2819 | 7583 | 0.248907 | ATCGAGCAGCAATGCAATGC | 60.249 | 50.000 | 19.23 | 19.23 | 46.78 | 3.56 |
2820 | 7584 | 1.755161 | GATCGAGCAGCAATGCAATG | 58.245 | 50.000 | 8.35 | 0.00 | 37.25 | 2.82 |
2821 | 7585 | 0.306840 | CGATCGAGCAGCAATGCAAT | 59.693 | 50.000 | 10.26 | 0.00 | 37.25 | 3.56 |
2822 | 7586 | 1.708193 | CCGATCGAGCAGCAATGCAA | 61.708 | 55.000 | 18.66 | 0.00 | 37.25 | 4.08 |
2826 | 7590 | 4.427394 | GACCGATCGAGCAGCAAT | 57.573 | 55.556 | 18.66 | 0.00 | 0.00 | 3.56 |
2839 | 7603 | 1.154225 | GCAAAGCAATGGTCGACCG | 60.154 | 57.895 | 28.70 | 16.22 | 39.43 | 4.79 |
2842 | 7606 | 1.896220 | AGAAGCAAAGCAATGGTCGA | 58.104 | 45.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2845 | 7609 | 2.821969 | CACCTAGAAGCAAAGCAATGGT | 59.178 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
2848 | 7612 | 2.821969 | CCACACCTAGAAGCAAAGCAAT | 59.178 | 45.455 | 0.00 | 0.00 | 0.00 | 3.56 |
2853 | 7617 | 2.903784 | TCTAGCCACACCTAGAAGCAAA | 59.096 | 45.455 | 0.00 | 0.00 | 40.49 | 3.68 |
2858 | 7622 | 3.701542 | CACAGATCTAGCCACACCTAGAA | 59.298 | 47.826 | 0.00 | 0.00 | 44.92 | 2.10 |
2860 | 7624 | 2.363680 | CCACAGATCTAGCCACACCTAG | 59.636 | 54.545 | 0.00 | 0.00 | 36.88 | 3.02 |
2861 | 7625 | 2.024369 | TCCACAGATCTAGCCACACCTA | 60.024 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
2863 | 7627 | 1.195115 | TCCACAGATCTAGCCACACC | 58.805 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
2864 | 7628 | 2.622436 | GTTCCACAGATCTAGCCACAC | 58.378 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
2867 | 7631 | 1.951209 | TGGTTCCACAGATCTAGCCA | 58.049 | 50.000 | 0.00 | 0.00 | 0.00 | 4.75 |
2868 | 7632 | 2.633488 | GTTGGTTCCACAGATCTAGCC | 58.367 | 52.381 | 0.00 | 0.00 | 0.00 | 3.93 |
2869 | 7633 | 2.271800 | CGTTGGTTCCACAGATCTAGC | 58.728 | 52.381 | 0.00 | 0.00 | 0.00 | 3.42 |
2870 | 7634 | 2.093973 | AGCGTTGGTTCCACAGATCTAG | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2874 | 7638 | 0.670546 | CGAGCGTTGGTTCCACAGAT | 60.671 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2875 | 7639 | 1.300620 | CGAGCGTTGGTTCCACAGA | 60.301 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
2876 | 7640 | 2.954753 | GCGAGCGTTGGTTCCACAG | 61.955 | 63.158 | 0.00 | 0.00 | 0.00 | 3.66 |
2877 | 7641 | 2.970324 | GCGAGCGTTGGTTCCACA | 60.970 | 61.111 | 0.00 | 0.00 | 0.00 | 4.17 |
2878 | 7642 | 2.665185 | AGCGAGCGTTGGTTCCAC | 60.665 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
2879 | 7643 | 2.357034 | GAGCGAGCGTTGGTTCCA | 60.357 | 61.111 | 0.00 | 0.00 | 0.00 | 3.53 |
2880 | 7644 | 1.901650 | CTTGAGCGAGCGTTGGTTCC | 61.902 | 60.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2881 | 7645 | 1.222115 | ACTTGAGCGAGCGTTGGTTC | 61.222 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2882 | 7646 | 1.227556 | ACTTGAGCGAGCGTTGGTT | 60.228 | 52.632 | 0.00 | 0.00 | 0.00 | 3.67 |
2883 | 7647 | 1.956170 | CACTTGAGCGAGCGTTGGT | 60.956 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
2884 | 7648 | 1.664649 | TCACTTGAGCGAGCGTTGG | 60.665 | 57.895 | 0.00 | 0.00 | 0.00 | 3.77 |
2885 | 7649 | 1.215014 | TGTCACTTGAGCGAGCGTTG | 61.215 | 55.000 | 0.00 | 0.00 | 0.00 | 4.10 |
2886 | 7650 | 0.941463 | CTGTCACTTGAGCGAGCGTT | 60.941 | 55.000 | 0.00 | 0.00 | 0.00 | 4.84 |
2887 | 7651 | 1.372251 | CTGTCACTTGAGCGAGCGT | 60.372 | 57.895 | 0.00 | 0.00 | 0.00 | 5.07 |
2888 | 7652 | 0.664466 | TTCTGTCACTTGAGCGAGCG | 60.664 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2889 | 7653 | 1.719600 | ATTCTGTCACTTGAGCGAGC | 58.280 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2890 | 7654 | 5.582550 | TGTATATTCTGTCACTTGAGCGAG | 58.417 | 41.667 | 0.00 | 0.00 | 0.00 | 5.03 |
2891 | 7655 | 5.576447 | TGTATATTCTGTCACTTGAGCGA | 57.424 | 39.130 | 0.00 | 0.00 | 0.00 | 4.93 |
2892 | 7656 | 6.647212 | TTTGTATATTCTGTCACTTGAGCG | 57.353 | 37.500 | 0.00 | 0.00 | 0.00 | 5.03 |
2926 | 7690 | 9.582431 | TCGTGTAAATTTAATGTTTTGGTTTCA | 57.418 | 25.926 | 0.00 | 0.00 | 0.00 | 2.69 |
2930 | 7694 | 9.974980 | AGATTCGTGTAAATTTAATGTTTTGGT | 57.025 | 25.926 | 0.00 | 0.00 | 0.00 | 3.67 |
2935 | 7699 | 9.325150 | CGTGAAGATTCGTGTAAATTTAATGTT | 57.675 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
2936 | 7700 | 8.500773 | ACGTGAAGATTCGTGTAAATTTAATGT | 58.499 | 29.630 | 0.00 | 0.00 | 38.85 | 2.71 |
2937 | 7701 | 8.874745 | ACGTGAAGATTCGTGTAAATTTAATG | 57.125 | 30.769 | 0.00 | 0.00 | 38.85 | 1.90 |
2940 | 7704 | 9.409312 | TCTTACGTGAAGATTCGTGTAAATTTA | 57.591 | 29.630 | 0.00 | 0.00 | 39.36 | 1.40 |
2941 | 7705 | 8.301730 | TCTTACGTGAAGATTCGTGTAAATTT | 57.698 | 30.769 | 0.00 | 0.00 | 39.36 | 1.82 |
2942 | 7706 | 7.878477 | TCTTACGTGAAGATTCGTGTAAATT | 57.122 | 32.000 | 0.00 | 0.00 | 39.36 | 1.82 |
2955 | 7719 | 7.323895 | CCTATATTGACGACATCTTACGTGAAG | 59.676 | 40.741 | 0.00 | 0.00 | 42.74 | 3.02 |
2956 | 7720 | 7.136772 | CCTATATTGACGACATCTTACGTGAA | 58.863 | 38.462 | 0.00 | 0.00 | 42.74 | 3.18 |
2957 | 7721 | 6.293790 | CCCTATATTGACGACATCTTACGTGA | 60.294 | 42.308 | 0.00 | 0.00 | 42.74 | 4.35 |
2958 | 7722 | 5.856986 | CCCTATATTGACGACATCTTACGTG | 59.143 | 44.000 | 0.00 | 0.00 | 42.74 | 4.49 |
2959 | 7723 | 5.533903 | ACCCTATATTGACGACATCTTACGT | 59.466 | 40.000 | 0.00 | 0.00 | 45.32 | 3.57 |
2960 | 7724 | 6.010294 | ACCCTATATTGACGACATCTTACG | 57.990 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
2961 | 7725 | 7.216973 | AGACCCTATATTGACGACATCTTAC | 57.783 | 40.000 | 0.00 | 0.00 | 0.00 | 2.34 |
2962 | 7726 | 8.162085 | ACTAGACCCTATATTGACGACATCTTA | 58.838 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
2963 | 7727 | 7.005296 | ACTAGACCCTATATTGACGACATCTT | 58.995 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
2964 | 7728 | 6.544650 | ACTAGACCCTATATTGACGACATCT | 58.455 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2965 | 7729 | 6.402334 | CGACTAGACCCTATATTGACGACATC | 60.402 | 46.154 | 0.00 | 0.00 | 0.00 | 3.06 |
2966 | 7730 | 5.411977 | CGACTAGACCCTATATTGACGACAT | 59.588 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2967 | 7731 | 4.753610 | CGACTAGACCCTATATTGACGACA | 59.246 | 45.833 | 0.00 | 0.00 | 0.00 | 4.35 |
2968 | 7732 | 4.993584 | TCGACTAGACCCTATATTGACGAC | 59.006 | 45.833 | 0.00 | 0.00 | 0.00 | 4.34 |
2969 | 7733 | 4.993584 | GTCGACTAGACCCTATATTGACGA | 59.006 | 45.833 | 8.70 | 0.00 | 43.95 | 4.20 |
2970 | 7734 | 5.280328 | GTCGACTAGACCCTATATTGACG | 57.720 | 47.826 | 8.70 | 0.00 | 43.95 | 4.35 |
2983 | 7747 | 6.092396 | GGATCGCTAAATATCAGTCGACTAGA | 59.908 | 42.308 | 19.57 | 17.66 | 0.00 | 2.43 |
2984 | 7748 | 6.252281 | GGATCGCTAAATATCAGTCGACTAG | 58.748 | 44.000 | 19.57 | 11.28 | 0.00 | 2.57 |
2985 | 7749 | 5.123502 | GGGATCGCTAAATATCAGTCGACTA | 59.876 | 44.000 | 19.57 | 2.81 | 0.00 | 2.59 |
2986 | 7750 | 4.082679 | GGGATCGCTAAATATCAGTCGACT | 60.083 | 45.833 | 13.58 | 13.58 | 0.00 | 4.18 |
2987 | 7751 | 4.167268 | GGGATCGCTAAATATCAGTCGAC | 58.833 | 47.826 | 7.70 | 7.70 | 0.00 | 4.20 |
2988 | 7752 | 3.192844 | GGGGATCGCTAAATATCAGTCGA | 59.807 | 47.826 | 9.90 | 0.00 | 0.00 | 4.20 |
2989 | 7753 | 3.193691 | AGGGGATCGCTAAATATCAGTCG | 59.806 | 47.826 | 9.90 | 0.00 | 0.00 | 4.18 |
2990 | 7754 | 4.810191 | AGGGGATCGCTAAATATCAGTC | 57.190 | 45.455 | 9.90 | 0.00 | 0.00 | 3.51 |
2991 | 7755 | 5.308825 | CAAAGGGGATCGCTAAATATCAGT | 58.691 | 41.667 | 9.90 | 0.00 | 0.00 | 3.41 |
2992 | 7756 | 4.154918 | GCAAAGGGGATCGCTAAATATCAG | 59.845 | 45.833 | 9.90 | 0.00 | 0.00 | 2.90 |
2993 | 7757 | 4.072131 | GCAAAGGGGATCGCTAAATATCA | 58.928 | 43.478 | 9.90 | 0.00 | 0.00 | 2.15 |
2994 | 7758 | 4.327680 | AGCAAAGGGGATCGCTAAATATC | 58.672 | 43.478 | 9.90 | 0.00 | 31.60 | 1.63 |
2995 | 7759 | 4.373156 | AGCAAAGGGGATCGCTAAATAT | 57.627 | 40.909 | 9.90 | 0.00 | 31.60 | 1.28 |
2996 | 7760 | 3.857157 | AGCAAAGGGGATCGCTAAATA | 57.143 | 42.857 | 9.90 | 0.00 | 31.60 | 1.40 |
2997 | 7761 | 2.736670 | AGCAAAGGGGATCGCTAAAT | 57.263 | 45.000 | 9.90 | 0.00 | 31.60 | 1.40 |
2998 | 7762 | 2.507407 | AAGCAAAGGGGATCGCTAAA | 57.493 | 45.000 | 9.90 | 0.00 | 33.45 | 1.85 |
2999 | 7763 | 2.026262 | AGAAAGCAAAGGGGATCGCTAA | 60.026 | 45.455 | 9.90 | 0.00 | 33.45 | 3.09 |
3000 | 7764 | 1.559682 | AGAAAGCAAAGGGGATCGCTA | 59.440 | 47.619 | 9.90 | 0.00 | 33.45 | 4.26 |
3001 | 7765 | 0.329596 | AGAAAGCAAAGGGGATCGCT | 59.670 | 50.000 | 9.90 | 0.00 | 35.90 | 4.93 |
3002 | 7766 | 1.177401 | AAGAAAGCAAAGGGGATCGC | 58.823 | 50.000 | 0.06 | 0.06 | 0.00 | 4.58 |
3003 | 7767 | 3.084786 | AGAAAGAAAGCAAAGGGGATCG | 58.915 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
3004 | 7768 | 4.642437 | CCTAGAAAGAAAGCAAAGGGGATC | 59.358 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
3005 | 7769 | 4.044698 | ACCTAGAAAGAAAGCAAAGGGGAT | 59.955 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
3006 | 7770 | 3.397955 | ACCTAGAAAGAAAGCAAAGGGGA | 59.602 | 43.478 | 0.00 | 0.00 | 0.00 | 4.81 |
3007 | 7771 | 3.507622 | CACCTAGAAAGAAAGCAAAGGGG | 59.492 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
3008 | 7772 | 3.507622 | CCACCTAGAAAGAAAGCAAAGGG | 59.492 | 47.826 | 0.00 | 0.00 | 0.00 | 3.95 |
3009 | 7773 | 4.398319 | TCCACCTAGAAAGAAAGCAAAGG | 58.602 | 43.478 | 0.00 | 0.00 | 0.00 | 3.11 |
3010 | 7774 | 5.765182 | TCTTCCACCTAGAAAGAAAGCAAAG | 59.235 | 40.000 | 0.00 | 0.00 | 0.00 | 2.77 |
3011 | 7775 | 5.690865 | TCTTCCACCTAGAAAGAAAGCAAA | 58.309 | 37.500 | 0.00 | 0.00 | 0.00 | 3.68 |
3012 | 7776 | 5.304686 | TCTTCCACCTAGAAAGAAAGCAA | 57.695 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
3013 | 7777 | 4.974645 | TCTTCCACCTAGAAAGAAAGCA | 57.025 | 40.909 | 0.00 | 0.00 | 0.00 | 3.91 |
3020 | 7784 | 5.280011 | CCTGCTACTTTCTTCCACCTAGAAA | 60.280 | 44.000 | 0.00 | 0.00 | 38.82 | 2.52 |
3021 | 7785 | 4.223032 | CCTGCTACTTTCTTCCACCTAGAA | 59.777 | 45.833 | 0.00 | 0.00 | 0.00 | 2.10 |
3022 | 7786 | 3.769844 | CCTGCTACTTTCTTCCACCTAGA | 59.230 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
3023 | 7787 | 3.118592 | CCCTGCTACTTTCTTCCACCTAG | 60.119 | 52.174 | 0.00 | 0.00 | 0.00 | 3.02 |
3024 | 7788 | 2.838202 | CCCTGCTACTTTCTTCCACCTA | 59.162 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
3030 | 7794 | 6.314152 | GTGTTTCTATCCCTGCTACTTTCTTC | 59.686 | 42.308 | 0.00 | 0.00 | 0.00 | 2.87 |
3038 | 7802 | 2.771943 | CCCTGTGTTTCTATCCCTGCTA | 59.228 | 50.000 | 0.00 | 0.00 | 0.00 | 3.49 |
3040 | 7804 | 1.559682 | TCCCTGTGTTTCTATCCCTGC | 59.440 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
3041 | 7805 | 2.418746 | CGTCCCTGTGTTTCTATCCCTG | 60.419 | 54.545 | 0.00 | 0.00 | 0.00 | 4.45 |
3043 | 7807 | 1.134491 | CCGTCCCTGTGTTTCTATCCC | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 3.85 |
3044 | 7808 | 1.553704 | ACCGTCCCTGTGTTTCTATCC | 59.446 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
3047 | 7811 | 0.034337 | GCACCGTCCCTGTGTTTCTA | 59.966 | 55.000 | 0.00 | 0.00 | 36.11 | 2.10 |
3048 | 7812 | 1.227853 | GCACCGTCCCTGTGTTTCT | 60.228 | 57.895 | 0.00 | 0.00 | 36.11 | 2.52 |
3050 | 7814 | 1.227853 | GAGCACCGTCCCTGTGTTT | 60.228 | 57.895 | 0.00 | 0.00 | 36.11 | 2.83 |
3051 | 7815 | 1.978455 | TTGAGCACCGTCCCTGTGTT | 61.978 | 55.000 | 0.00 | 0.00 | 36.11 | 3.32 |
3052 | 7816 | 1.768684 | ATTGAGCACCGTCCCTGTGT | 61.769 | 55.000 | 0.00 | 0.00 | 36.11 | 3.72 |
3053 | 7817 | 1.003355 | ATTGAGCACCGTCCCTGTG | 60.003 | 57.895 | 0.00 | 0.00 | 36.79 | 3.66 |
3054 | 7818 | 1.194781 | AGATTGAGCACCGTCCCTGT | 61.195 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3055 | 7819 | 0.742281 | CAGATTGAGCACCGTCCCTG | 60.742 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3056 | 7820 | 1.599047 | CAGATTGAGCACCGTCCCT | 59.401 | 57.895 | 0.00 | 0.00 | 0.00 | 4.20 |
3057 | 7821 | 2.109126 | GCAGATTGAGCACCGTCCC | 61.109 | 63.158 | 0.00 | 0.00 | 0.00 | 4.46 |
3058 | 7822 | 0.674895 | AAGCAGATTGAGCACCGTCC | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3059 | 7823 | 1.160137 | AAAGCAGATTGAGCACCGTC | 58.840 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3060 | 7824 | 1.267806 | CAAAAGCAGATTGAGCACCGT | 59.732 | 47.619 | 0.00 | 0.00 | 0.00 | 4.83 |
3061 | 7825 | 1.267806 | ACAAAAGCAGATTGAGCACCG | 59.732 | 47.619 | 3.55 | 0.00 | 0.00 | 4.94 |
3062 | 7826 | 3.005155 | AGAACAAAAGCAGATTGAGCACC | 59.995 | 43.478 | 3.55 | 0.00 | 0.00 | 5.01 |
3063 | 7827 | 4.234530 | AGAACAAAAGCAGATTGAGCAC | 57.765 | 40.909 | 3.55 | 0.00 | 0.00 | 4.40 |
3064 | 7828 | 4.924305 | AAGAACAAAAGCAGATTGAGCA | 57.076 | 36.364 | 3.55 | 0.00 | 0.00 | 4.26 |
3065 | 7829 | 5.557703 | GCAAAAGAACAAAAGCAGATTGAGC | 60.558 | 40.000 | 3.55 | 0.00 | 0.00 | 4.26 |
3066 | 7830 | 5.751990 | AGCAAAAGAACAAAAGCAGATTGAG | 59.248 | 36.000 | 3.55 | 0.00 | 0.00 | 3.02 |
3067 | 7831 | 5.663456 | AGCAAAAGAACAAAAGCAGATTGA | 58.337 | 33.333 | 3.55 | 0.00 | 0.00 | 2.57 |
3068 | 7832 | 5.978934 | AGCAAAAGAACAAAAGCAGATTG | 57.021 | 34.783 | 0.00 | 0.00 | 0.00 | 2.67 |
3069 | 7833 | 6.237915 | CGAAAGCAAAAGAACAAAAGCAGATT | 60.238 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
3070 | 7834 | 5.232838 | CGAAAGCAAAAGAACAAAAGCAGAT | 59.767 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3071 | 7835 | 4.562394 | CGAAAGCAAAAGAACAAAAGCAGA | 59.438 | 37.500 | 0.00 | 0.00 | 0.00 | 4.26 |
3072 | 7836 | 4.259930 | CCGAAAGCAAAAGAACAAAAGCAG | 60.260 | 41.667 | 0.00 | 0.00 | 0.00 | 4.24 |
3073 | 7837 | 3.616379 | CCGAAAGCAAAAGAACAAAAGCA | 59.384 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
3074 | 7838 | 3.616821 | ACCGAAAGCAAAAGAACAAAAGC | 59.383 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
3081 | 7845 | 4.647611 | TCCATCTACCGAAAGCAAAAGAA | 58.352 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
3117 | 7881 | 0.749649 | ACATGTTCGCTTTGCCCAAA | 59.250 | 45.000 | 0.00 | 0.00 | 0.00 | 3.28 |
3118 | 7882 | 0.313672 | GACATGTTCGCTTTGCCCAA | 59.686 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
3120 | 7884 | 0.527565 | ATGACATGTTCGCTTTGCCC | 59.472 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
3121 | 7885 | 1.791555 | CGATGACATGTTCGCTTTGCC | 60.792 | 52.381 | 6.98 | 0.00 | 0.00 | 4.52 |
3122 | 7886 | 1.135972 | ACGATGACATGTTCGCTTTGC | 60.136 | 47.619 | 17.61 | 0.00 | 38.91 | 3.68 |
3124 | 7888 | 2.805671 | TCAACGATGACATGTTCGCTTT | 59.194 | 40.909 | 17.61 | 5.21 | 38.91 | 3.51 |
3125 | 7889 | 2.412870 | TCAACGATGACATGTTCGCTT | 58.587 | 42.857 | 17.61 | 9.78 | 38.91 | 4.68 |
3126 | 7890 | 2.078849 | TCAACGATGACATGTTCGCT | 57.921 | 45.000 | 17.61 | 5.09 | 38.91 | 4.93 |
3127 | 7891 | 2.697363 | CATCAACGATGACATGTTCGC | 58.303 | 47.619 | 17.61 | 0.00 | 42.09 | 4.70 |
3129 | 7893 | 4.346734 | AAGCATCAACGATGACATGTTC | 57.653 | 40.909 | 8.14 | 0.00 | 42.09 | 3.18 |
3130 | 7894 | 4.669965 | CGAAAGCATCAACGATGACATGTT | 60.670 | 41.667 | 8.14 | 0.00 | 42.09 | 2.71 |
3131 | 7895 | 3.181517 | CGAAAGCATCAACGATGACATGT | 60.182 | 43.478 | 0.00 | 0.00 | 42.09 | 3.21 |
3132 | 7896 | 3.181517 | ACGAAAGCATCAACGATGACATG | 60.182 | 43.478 | 8.14 | 0.00 | 42.09 | 3.21 |
3133 | 7897 | 3.002791 | ACGAAAGCATCAACGATGACAT | 58.997 | 40.909 | 8.14 | 0.00 | 42.09 | 3.06 |
3186 | 8092 | 2.224066 | GCCCATGACGCATCTACTAACT | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3223 | 8129 | 6.344002 | CGATACGTACGACAAAGCTTGATTAG | 60.344 | 42.308 | 24.41 | 0.00 | 0.00 | 1.73 |
3228 | 8134 | 2.912967 | ACGATACGTACGACAAAGCTTG | 59.087 | 45.455 | 24.41 | 4.04 | 38.73 | 4.01 |
3245 | 8156 | 0.467290 | ACACCCAGCAACCAAACGAT | 60.467 | 50.000 | 0.00 | 0.00 | 0.00 | 3.73 |
3246 | 8157 | 0.681564 | AACACCCAGCAACCAAACGA | 60.682 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3272 | 8186 | 5.059833 | GGCATCTAATTCTTGTAGGTGAGG | 58.940 | 45.833 | 0.00 | 0.00 | 32.33 | 3.86 |
3282 | 8196 | 4.442706 | CACGTACAGGGCATCTAATTCTT | 58.557 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
3320 | 8234 | 3.380479 | CATCACATGCCCATTCATTCC | 57.620 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
3368 | 8282 | 2.367202 | ATGGGTCAGGGTACGCCTG | 61.367 | 63.158 | 19.09 | 19.09 | 36.71 | 4.85 |
3369 | 8283 | 2.040606 | ATGGGTCAGGGTACGCCT | 59.959 | 61.111 | 6.27 | 1.52 | 34.45 | 5.52 |
3370 | 8284 | 2.189521 | CATGGGTCAGGGTACGCC | 59.810 | 66.667 | 6.27 | 0.00 | 0.00 | 5.68 |
3371 | 8285 | 2.513897 | GCATGGGTCAGGGTACGC | 60.514 | 66.667 | 0.77 | 0.77 | 0.00 | 4.42 |
3372 | 8286 | 0.815213 | CATGCATGGGTCAGGGTACG | 60.815 | 60.000 | 19.40 | 0.00 | 0.00 | 3.67 |
3373 | 8287 | 0.466189 | CCATGCATGGGTCAGGGTAC | 60.466 | 60.000 | 34.31 | 0.00 | 44.31 | 3.34 |
3374 | 8288 | 1.922057 | CCATGCATGGGTCAGGGTA | 59.078 | 57.895 | 34.31 | 0.00 | 44.31 | 3.69 |
3396 | 8310 | 2.590007 | CAGGTAGCAGCCGCCATC | 60.590 | 66.667 | 5.72 | 0.00 | 39.83 | 3.51 |
3420 | 8334 | 0.447406 | CATTGATTGAACGAGCGGCA | 59.553 | 50.000 | 1.45 | 0.00 | 0.00 | 5.69 |
3421 | 8335 | 0.447801 | ACATTGATTGAACGAGCGGC | 59.552 | 50.000 | 0.00 | 0.00 | 0.00 | 6.53 |
3422 | 8336 | 1.791555 | GCACATTGATTGAACGAGCGG | 60.792 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
3423 | 8337 | 1.136000 | TGCACATTGATTGAACGAGCG | 60.136 | 47.619 | 0.00 | 0.00 | 0.00 | 5.03 |
3424 | 8338 | 2.245096 | GTGCACATTGATTGAACGAGC | 58.755 | 47.619 | 13.17 | 0.00 | 0.00 | 5.03 |
3425 | 8339 | 3.485633 | CTGTGCACATTGATTGAACGAG | 58.514 | 45.455 | 22.00 | 0.00 | 0.00 | 4.18 |
3426 | 8340 | 2.350676 | GCTGTGCACATTGATTGAACGA | 60.351 | 45.455 | 22.00 | 0.00 | 0.00 | 3.85 |
3427 | 8341 | 1.980844 | GCTGTGCACATTGATTGAACG | 59.019 | 47.619 | 22.00 | 5.47 | 0.00 | 3.95 |
3428 | 8342 | 3.240069 | GAGCTGTGCACATTGATTGAAC | 58.760 | 45.455 | 22.00 | 1.74 | 0.00 | 3.18 |
3429 | 8343 | 2.229543 | GGAGCTGTGCACATTGATTGAA | 59.770 | 45.455 | 22.00 | 0.00 | 0.00 | 2.69 |
3430 | 8344 | 1.814394 | GGAGCTGTGCACATTGATTGA | 59.186 | 47.619 | 22.00 | 0.00 | 0.00 | 2.57 |
3431 | 8345 | 1.816835 | AGGAGCTGTGCACATTGATTG | 59.183 | 47.619 | 22.00 | 8.67 | 0.00 | 2.67 |
3432 | 8346 | 2.211250 | AGGAGCTGTGCACATTGATT | 57.789 | 45.000 | 22.00 | 4.18 | 0.00 | 2.57 |
3433 | 8347 | 2.211250 | AAGGAGCTGTGCACATTGAT | 57.789 | 45.000 | 22.00 | 8.50 | 0.00 | 2.57 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.