Multiple sequence alignment - TraesCS2D01G596700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G596700 chr2D 100.000 2979 0 0 1 2979 649563814 649566792 0.000000e+00 5428.0
1 TraesCS2D01G596700 chr2D 85.287 870 65 18 1085 1912 649585422 649586270 0.000000e+00 839.0
2 TraesCS2D01G596700 chr2D 100.000 235 0 0 2244 2478 20199258 20199492 4.560000e-118 435.0
3 TraesCS2D01G596700 chr2D 92.778 180 13 0 2051 2230 649580288 649580109 8.190000e-66 261.0
4 TraesCS2D01G596700 chr2D 94.872 39 2 0 881 919 649585259 649585297 8.920000e-06 62.1
5 TraesCS2D01G596700 chr2A 93.023 1204 41 14 632 1820 775273093 775271918 0.000000e+00 1718.0
6 TraesCS2D01G596700 chr2A 84.144 1192 98 35 862 2021 775249498 775248366 0.000000e+00 1070.0
7 TraesCS2D01G596700 chr2A 85.496 262 35 3 99 360 775273457 775273199 1.360000e-68 270.0
8 TraesCS2D01G596700 chr2B 94.007 1118 31 17 711 1820 785270383 785271472 0.000000e+00 1661.0
9 TraesCS2D01G596700 chr2B 83.930 977 71 25 880 1819 785277910 785278837 0.000000e+00 856.0
10 TraesCS2D01G596700 chr2B 85.106 188 26 2 2047 2233 8711709 8711523 1.090000e-44 191.0
11 TraesCS2D01G596700 chr2B 85.792 183 21 4 2050 2232 168613863 168613686 3.920000e-44 189.0
12 TraesCS2D01G596700 chr2B 85.246 183 25 2 2049 2230 793806239 793806420 1.410000e-43 187.0
13 TraesCS2D01G596700 chr2B 85.246 183 24 3 2049 2230 8710719 8710899 5.070000e-43 185.0
14 TraesCS2D01G596700 chr7D 99.114 677 5 1 2244 2920 472542325 472543000 0.000000e+00 1179.0
15 TraesCS2D01G596700 chr7D 100.000 432 0 0 2489 2920 131725590 131726021 0.000000e+00 798.0
16 TraesCS2D01G596700 chr7D 97.917 432 7 1 2489 2920 562108058 562108487 0.000000e+00 747.0
17 TraesCS2D01G596700 chr7D 100.000 235 0 0 2244 2478 572684431 572684197 4.560000e-118 435.0
18 TraesCS2D01G596700 chr7D 93.617 235 15 0 2244 2478 25759301 25759067 4.720000e-93 351.0
19 TraesCS2D01G596700 chr7D 88.166 169 17 3 2049 2214 66537597 66537765 6.510000e-47 198.0
20 TraesCS2D01G596700 chr7D 84.066 182 27 2 2049 2229 556434132 556433952 1.100000e-39 174.0
21 TraesCS2D01G596700 chr7D 83.696 184 24 5 2040 2220 1516960 1517140 5.110000e-38 169.0
22 TraesCS2D01G596700 chr7D 80.465 215 27 5 1562 1776 414087263 414087064 1.850000e-32 150.0
23 TraesCS2D01G596700 chr1D 97.744 665 3 1 2268 2920 22543526 22544190 0.000000e+00 1098.0
24 TraesCS2D01G596700 chr1D 100.000 235 0 0 2244 2478 468269467 468269701 4.560000e-118 435.0
25 TraesCS2D01G596700 chr1D 99.574 235 1 0 2244 2478 408867670 408867436 2.120000e-116 429.0
26 TraesCS2D01G596700 chrUn 99.074 432 3 1 2489 2920 97824191 97823761 0.000000e+00 774.0
27 TraesCS2D01G596700 chrUn 100.000 49 0 0 2931 2979 19068447 19068495 1.140000e-14 91.6
28 TraesCS2D01G596700 chrUn 100.000 49 0 0 2931 2979 97824053 97824005 1.140000e-14 91.6
29 TraesCS2D01G596700 chrUn 100.000 49 0 0 2931 2979 102766392 102766344 1.140000e-14 91.6
30 TraesCS2D01G596700 chrUn 100.000 49 0 0 2931 2979 105309975 105310023 1.140000e-14 91.6
31 TraesCS2D01G596700 chrUn 100.000 49 0 0 2931 2979 108928007 108927959 1.140000e-14 91.6
32 TraesCS2D01G596700 chrUn 100.000 49 0 0 2931 2979 110477357 110477405 1.140000e-14 91.6
33 TraesCS2D01G596700 chrUn 100.000 49 0 0 2931 2979 111175000 111174952 1.140000e-14 91.6
34 TraesCS2D01G596700 chrUn 100.000 49 0 0 2931 2979 112583035 112582987 1.140000e-14 91.6
35 TraesCS2D01G596700 chrUn 100.000 49 0 0 2931 2979 113138459 113138411 1.140000e-14 91.6
36 TraesCS2D01G596700 chrUn 100.000 49 0 0 2931 2979 132234168 132234216 1.140000e-14 91.6
37 TraesCS2D01G596700 chr4D 98.843 432 3 1 2489 2920 47470190 47469761 0.000000e+00 769.0
38 TraesCS2D01G596700 chr4D 89.474 57 3 3 434 489 506120334 506120388 5.330000e-08 69.4
39 TraesCS2D01G596700 chr6D 98.161 435 3 2 2489 2920 8186592 8186160 0.000000e+00 754.0
40 TraesCS2D01G596700 chr6D 99.574 235 1 0 2244 2478 461928105 461928339 2.120000e-116 429.0
41 TraesCS2D01G596700 chr6D 89.796 245 24 1 2235 2478 35601476 35601232 2.230000e-81 313.0
42 TraesCS2D01G596700 chr6D 81.443 194 30 5 2049 2239 420534110 420533920 1.430000e-33 154.0
43 TraesCS2D01G596700 chr5D 97.931 435 6 2 2489 2920 370918537 370918971 0.000000e+00 750.0
44 TraesCS2D01G596700 chr5D 97.917 432 5 1 2489 2920 239464351 239463924 0.000000e+00 745.0
45 TraesCS2D01G596700 chr5D 99.574 235 1 0 2244 2478 428590448 428590214 2.120000e-116 429.0
46 TraesCS2D01G596700 chr5D 99.574 235 1 0 2244 2478 490581394 490581628 2.120000e-116 429.0
47 TraesCS2D01G596700 chr5D 99.574 235 1 0 2244 2478 558263970 558263736 2.120000e-116 429.0
48 TraesCS2D01G596700 chr5D 95.102 245 11 1 2235 2478 246800268 246800024 4.660000e-103 385.0
49 TraesCS2D01G596700 chr5D 92.553 188 14 0 2048 2235 519659983 519660170 1.360000e-68 270.0
50 TraesCS2D01G596700 chr5D 81.720 186 31 3 2049 2233 556051086 556050903 5.140000e-33 152.0
51 TraesCS2D01G596700 chr3D 97.921 433 7 2 2489 2920 611922863 611922432 0.000000e+00 749.0
52 TraesCS2D01G596700 chr3D 99.574 235 1 0 2244 2478 21701059 21700825 2.120000e-116 429.0
53 TraesCS2D01G596700 chr3D 80.435 184 23 10 1585 1766 481731993 481732165 8.670000e-26 128.0
54 TraesCS2D01G596700 chr6B 92.827 237 15 2 2234 2469 6128265 6128030 2.840000e-90 342.0
55 TraesCS2D01G596700 chr6B 91.429 245 20 1 2235 2478 606042588 606042832 4.760000e-88 335.0
56 TraesCS2D01G596700 chr3B 90.945 254 21 2 2227 2478 828879992 828880245 1.020000e-89 340.0
57 TraesCS2D01G596700 chr3B 89.655 58 6 0 434 491 679193785 679193842 1.150000e-09 75.0
58 TraesCS2D01G596700 chr4A 89.764 254 23 3 2223 2476 659923803 659924053 3.700000e-84 322.0
59 TraesCS2D01G596700 chr4A 83.193 119 15 4 376 491 629380250 629380366 1.460000e-18 104.0
60 TraesCS2D01G596700 chr5A 90.717 237 18 4 2244 2478 639777162 639776928 2.230000e-81 313.0
61 TraesCS2D01G596700 chr7A 89.474 247 25 1 2233 2478 80013217 80013463 8.020000e-81 311.0
62 TraesCS2D01G596700 chr7A 90.000 190 17 1 2048 2235 541372801 541372990 8.250000e-61 244.0
63 TraesCS2D01G596700 chr7A 81.553 206 22 6 1572 1776 475962903 475962713 3.980000e-34 156.0
64 TraesCS2D01G596700 chr6A 90.155 193 13 2 2049 2235 55560536 55560344 2.290000e-61 246.0
65 TraesCS2D01G596700 chr5B 84.409 186 26 3 2049 2233 14339096 14338913 2.360000e-41 180.0
66 TraesCS2D01G596700 chr5B 78.443 167 23 10 1599 1763 358018998 358019153 2.440000e-16 97.1
67 TraesCS2D01G596700 chr7B 80.751 213 26 6 1564 1776 428483438 428483241 5.140000e-33 152.0
68 TraesCS2D01G596700 chr1B 79.808 208 27 12 1562 1766 51401646 51401841 1.440000e-28 137.0
69 TraesCS2D01G596700 chr1B 84.848 66 9 1 431 496 678721366 678721302 6.890000e-07 65.8
70 TraesCS2D01G596700 chr1B 92.308 39 2 1 457 494 196370883 196370845 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G596700 chr2D 649563814 649566792 2978 False 5428.00 5428 100.0000 1 2979 1 chr2D.!!$F2 2978
1 TraesCS2D01G596700 chr2D 649585259 649586270 1011 False 450.55 839 90.0795 881 1912 2 chr2D.!!$F3 1031
2 TraesCS2D01G596700 chr2A 775248366 775249498 1132 True 1070.00 1070 84.1440 862 2021 1 chr2A.!!$R1 1159
3 TraesCS2D01G596700 chr2A 775271918 775273457 1539 True 994.00 1718 89.2595 99 1820 2 chr2A.!!$R2 1721
4 TraesCS2D01G596700 chr2B 785270383 785271472 1089 False 1661.00 1661 94.0070 711 1820 1 chr2B.!!$F2 1109
5 TraesCS2D01G596700 chr2B 785277910 785278837 927 False 856.00 856 83.9300 880 1819 1 chr2B.!!$F3 939
6 TraesCS2D01G596700 chr7D 472542325 472543000 675 False 1179.00 1179 99.1140 2244 2920 1 chr7D.!!$F4 676
7 TraesCS2D01G596700 chr1D 22543526 22544190 664 False 1098.00 1098 97.7440 2268 2920 1 chr1D.!!$F1 652

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
672 673 0.10852 CAACATGTCAATGCAGGGGC 60.109 55.0 0.0 0.0 37.29 5.8 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2082 2189 0.182775 AGAGTGTTTCCCGCAAACCT 59.817 50.0 5.93 3.51 43.52 3.5 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 9.855021 ATTTGACAATAACCAAATAAGTAGCAC 57.145 29.630 0.00 0.00 40.13 4.40
64 65 7.987750 TGACAATAACCAAATAAGTAGCACA 57.012 32.000 0.00 0.00 0.00 4.57
65 66 8.397575 TGACAATAACCAAATAAGTAGCACAA 57.602 30.769 0.00 0.00 0.00 3.33
66 67 8.851145 TGACAATAACCAAATAAGTAGCACAAA 58.149 29.630 0.00 0.00 0.00 2.83
67 68 9.855021 GACAATAACCAAATAAGTAGCACAAAT 57.145 29.630 0.00 0.00 0.00 2.32
75 76 9.023967 CCAAATAAGTAGCACAAATATGAAAGC 57.976 33.333 0.00 0.00 0.00 3.51
76 77 9.571810 CAAATAAGTAGCACAAATATGAAAGCA 57.428 29.630 0.00 0.00 0.00 3.91
78 79 9.573133 AATAAGTAGCACAAATATGAAAGCAAC 57.427 29.630 0.00 0.00 0.00 4.17
79 80 5.954335 AGTAGCACAAATATGAAAGCAACC 58.046 37.500 0.00 0.00 0.00 3.77
80 81 4.870123 AGCACAAATATGAAAGCAACCA 57.130 36.364 0.00 0.00 0.00 3.67
81 82 4.559153 AGCACAAATATGAAAGCAACCAC 58.441 39.130 0.00 0.00 0.00 4.16
82 83 4.281688 AGCACAAATATGAAAGCAACCACT 59.718 37.500 0.00 0.00 0.00 4.00
83 84 4.386652 GCACAAATATGAAAGCAACCACTG 59.613 41.667 0.00 0.00 0.00 3.66
84 85 5.771469 CACAAATATGAAAGCAACCACTGA 58.229 37.500 0.00 0.00 0.00 3.41
85 86 5.630680 CACAAATATGAAAGCAACCACTGAC 59.369 40.000 0.00 0.00 0.00 3.51
86 87 5.301551 ACAAATATGAAAGCAACCACTGACA 59.698 36.000 0.00 0.00 0.00 3.58
87 88 5.633830 AATATGAAAGCAACCACTGACAG 57.366 39.130 0.00 0.00 0.00 3.51
88 89 2.418368 TGAAAGCAACCACTGACAGT 57.582 45.000 1.07 1.07 0.00 3.55
89 90 2.722094 TGAAAGCAACCACTGACAGTT 58.278 42.857 5.04 0.00 0.00 3.16
90 91 2.423185 TGAAAGCAACCACTGACAGTTG 59.577 45.455 5.04 5.11 44.93 3.16
91 92 2.418368 AAGCAACCACTGACAGTTGA 57.582 45.000 13.31 0.00 44.93 3.18
92 93 2.645838 AGCAACCACTGACAGTTGAT 57.354 45.000 13.31 2.28 44.93 2.57
93 94 2.498167 AGCAACCACTGACAGTTGATC 58.502 47.619 13.31 2.50 44.93 2.92
94 95 1.537202 GCAACCACTGACAGTTGATCC 59.463 52.381 13.31 0.00 44.93 3.36
95 96 2.849942 CAACCACTGACAGTTGATCCA 58.150 47.619 13.31 0.00 44.93 3.41
96 97 2.549754 CAACCACTGACAGTTGATCCAC 59.450 50.000 13.31 0.00 44.93 4.02
97 98 1.768275 ACCACTGACAGTTGATCCACA 59.232 47.619 13.31 0.00 0.00 4.17
103 104 0.250295 ACAGTTGATCCACACACGGG 60.250 55.000 0.00 0.00 0.00 5.28
110 111 1.971357 GATCCACACACGGGATATCCT 59.029 52.381 21.18 0.00 45.05 3.24
111 112 2.759839 TCCACACACGGGATATCCTA 57.240 50.000 21.18 0.00 35.95 2.94
115 116 2.037121 CACACACGGGATATCCTATGCA 59.963 50.000 21.18 0.00 35.95 3.96
116 117 2.037251 ACACACGGGATATCCTATGCAC 59.963 50.000 21.18 2.65 35.95 4.57
132 133 5.864474 CCTATGCACGATAGATAAACCACTC 59.136 44.000 0.00 0.00 36.84 3.51
133 134 5.537300 ATGCACGATAGATAAACCACTCT 57.463 39.130 0.00 0.00 41.38 3.24
134 135 5.339008 TGCACGATAGATAAACCACTCTT 57.661 39.130 0.00 0.00 41.38 2.85
135 136 5.109210 TGCACGATAGATAAACCACTCTTG 58.891 41.667 0.00 0.00 41.38 3.02
138 139 6.330278 CACGATAGATAAACCACTCTTGTCA 58.670 40.000 0.00 0.00 41.38 3.58
147 148 4.236527 ACCACTCTTGTCAACTTCCTTT 57.763 40.909 0.00 0.00 0.00 3.11
158 159 1.915141 ACTTCCTTTGTGGCATCCTG 58.085 50.000 0.00 0.00 35.26 3.86
159 160 1.145738 ACTTCCTTTGTGGCATCCTGT 59.854 47.619 0.00 0.00 35.26 4.00
211 212 4.082523 CACCTCACCCGTCCGCAT 62.083 66.667 0.00 0.00 0.00 4.73
212 213 3.771160 ACCTCACCCGTCCGCATC 61.771 66.667 0.00 0.00 0.00 3.91
213 214 3.770040 CCTCACCCGTCCGCATCA 61.770 66.667 0.00 0.00 0.00 3.07
218 219 2.511600 CCCGTCCGCATCAGTTCC 60.512 66.667 0.00 0.00 0.00 3.62
231 232 1.065345 TCAGTTCCGTTGGTTTGGTCA 60.065 47.619 0.00 0.00 0.00 4.02
254 255 6.213397 TCAAGAAGGACCAAGTGATCAAGATA 59.787 38.462 0.00 0.00 0.00 1.98
258 259 8.112183 AGAAGGACCAAGTGATCAAGATATTTT 58.888 33.333 0.00 0.00 0.00 1.82
261 262 6.096001 GGACCAAGTGATCAAGATATTTTGCT 59.904 38.462 0.00 0.00 0.00 3.91
264 265 6.405508 CCAAGTGATCAAGATATTTTGCTGCT 60.406 38.462 0.00 0.00 0.00 4.24
288 289 3.566351 CCTCATTGAAATCCCTAACCCC 58.434 50.000 0.00 0.00 0.00 4.95
294 295 2.438021 TGAAATCCCTAACCCCATCGAG 59.562 50.000 0.00 0.00 0.00 4.04
296 297 0.399949 ATCCCTAACCCCATCGAGCA 60.400 55.000 0.00 0.00 0.00 4.26
299 300 0.541863 CCTAACCCCATCGAGCAAGT 59.458 55.000 0.00 0.00 0.00 3.16
301 302 1.207089 CTAACCCCATCGAGCAAGTGA 59.793 52.381 0.00 0.00 0.00 3.41
306 307 1.667724 CCCATCGAGCAAGTGATGAAC 59.332 52.381 3.89 0.00 43.68 3.18
318 319 1.787155 GTGATGAACGGGATCGATTCG 59.213 52.381 16.81 16.81 40.11 3.34
322 323 1.488261 GAACGGGATCGATTCGGCAC 61.488 60.000 20.59 8.95 40.11 5.01
323 324 2.106131 CGGGATCGATTCGGCACA 59.894 61.111 6.18 0.00 39.00 4.57
324 325 1.951130 CGGGATCGATTCGGCACAG 60.951 63.158 6.18 0.00 39.00 3.66
335 336 0.398522 TCGGCACAGGATGGGTAGAT 60.399 55.000 0.00 0.00 45.57 1.98
360 361 5.560966 TTTTGGTAGCTAAACTGCATAGC 57.439 39.130 9.37 9.37 44.85 2.97
372 373 0.605083 TGCATAGCTATAGCGCTGCT 59.395 50.000 34.24 22.57 46.26 4.24
373 374 1.818674 TGCATAGCTATAGCGCTGCTA 59.181 47.619 34.24 24.75 46.26 3.49
391 392 4.768659 GCTATTAGCACGCTATAGCATG 57.231 45.455 23.99 20.27 41.89 4.06
392 393 4.177026 GCTATTAGCACGCTATAGCATGT 58.823 43.478 23.99 12.06 41.89 3.21
393 394 5.340803 GCTATTAGCACGCTATAGCATGTA 58.659 41.667 23.99 11.29 41.89 2.29
394 395 5.805486 GCTATTAGCACGCTATAGCATGTAA 59.195 40.000 23.99 18.04 41.89 2.41
395 396 6.310467 GCTATTAGCACGCTATAGCATGTAAA 59.690 38.462 23.99 16.58 41.89 2.01
396 397 6.712241 ATTAGCACGCTATAGCATGTAAAG 57.288 37.500 23.99 8.58 42.21 1.85
397 398 4.322080 AGCACGCTATAGCATGTAAAGA 57.678 40.909 23.99 0.00 42.21 2.52
398 399 4.693283 AGCACGCTATAGCATGTAAAGAA 58.307 39.130 23.99 0.00 42.21 2.52
399 400 5.300752 AGCACGCTATAGCATGTAAAGAAT 58.699 37.500 23.99 0.00 42.21 2.40
400 401 5.760253 AGCACGCTATAGCATGTAAAGAATT 59.240 36.000 23.99 0.00 42.21 2.17
401 402 5.848036 GCACGCTATAGCATGTAAAGAATTG 59.152 40.000 23.99 5.79 42.21 2.32
402 403 6.511767 GCACGCTATAGCATGTAAAGAATTGT 60.512 38.462 23.99 6.41 42.21 2.71
403 404 7.065894 CACGCTATAGCATGTAAAGAATTGTC 58.934 38.462 23.99 0.00 42.21 3.18
404 405 6.986817 ACGCTATAGCATGTAAAGAATTGTCT 59.013 34.615 23.99 0.00 42.21 3.41
405 406 7.169982 ACGCTATAGCATGTAAAGAATTGTCTC 59.830 37.037 23.99 0.00 42.21 3.36
406 407 7.169813 CGCTATAGCATGTAAAGAATTGTCTCA 59.830 37.037 23.99 0.00 42.21 3.27
407 408 8.279103 GCTATAGCATGTAAAGAATTGTCTCAC 58.721 37.037 20.01 0.00 41.59 3.51
408 409 9.539825 CTATAGCATGTAAAGAATTGTCTCACT 57.460 33.333 0.00 0.00 30.70 3.41
410 411 9.890629 ATAGCATGTAAAGAATTGTCTCACTAA 57.109 29.630 0.00 0.00 30.70 2.24
411 412 8.621532 AGCATGTAAAGAATTGTCTCACTAAA 57.378 30.769 0.00 0.00 30.70 1.85
412 413 9.236006 AGCATGTAAAGAATTGTCTCACTAAAT 57.764 29.630 0.00 0.00 30.70 1.40
413 414 9.846248 GCATGTAAAGAATTGTCTCACTAAATT 57.154 29.630 0.00 0.00 30.70 1.82
420 421 9.512588 AAGAATTGTCTCACTAAATTGATCAGT 57.487 29.630 0.00 0.00 30.70 3.41
421 422 8.944029 AGAATTGTCTCACTAAATTGATCAGTG 58.056 33.333 5.84 5.84 40.83 3.66
422 423 6.486253 TTGTCTCACTAAATTGATCAGTGC 57.514 37.500 7.07 0.00 39.60 4.40
423 424 4.627035 TGTCTCACTAAATTGATCAGTGCG 59.373 41.667 7.07 2.28 39.60 5.34
424 425 3.618594 TCTCACTAAATTGATCAGTGCGC 59.381 43.478 0.00 0.00 39.60 6.09
425 426 3.599343 TCACTAAATTGATCAGTGCGCT 58.401 40.909 9.73 0.00 39.60 5.92
426 427 3.371898 TCACTAAATTGATCAGTGCGCTG 59.628 43.478 21.43 21.43 43.87 5.18
427 428 3.125829 CACTAAATTGATCAGTGCGCTGT 59.874 43.478 25.68 13.85 43.05 4.40
428 429 3.753272 ACTAAATTGATCAGTGCGCTGTT 59.247 39.130 25.68 18.41 43.05 3.16
429 430 3.648339 AAATTGATCAGTGCGCTGTTT 57.352 38.095 25.68 15.64 43.05 2.83
430 431 2.907910 ATTGATCAGTGCGCTGTTTC 57.092 45.000 25.68 21.99 43.05 2.78
431 432 0.512518 TTGATCAGTGCGCTGTTTCG 59.487 50.000 25.68 0.85 43.05 3.46
447 448 7.914537 GCTGTTTCGCTAATAGCATATTTTT 57.085 32.000 13.15 0.00 46.71 1.94
449 450 9.107367 GCTGTTTCGCTAATAGCATATTTTTAG 57.893 33.333 13.15 1.60 46.71 1.85
450 451 9.599322 CTGTTTCGCTAATAGCATATTTTTAGG 57.401 33.333 13.15 0.00 42.58 2.69
451 452 8.564574 TGTTTCGCTAATAGCATATTTTTAGGG 58.435 33.333 13.15 0.00 42.58 3.53
452 453 8.780249 GTTTCGCTAATAGCATATTTTTAGGGA 58.220 33.333 13.15 1.64 42.58 4.20
453 454 9.515226 TTTCGCTAATAGCATATTTTTAGGGAT 57.485 29.630 13.15 0.00 42.58 3.85
454 455 8.492673 TCGCTAATAGCATATTTTTAGGGATG 57.507 34.615 13.15 0.00 42.58 3.51
455 456 8.318412 TCGCTAATAGCATATTTTTAGGGATGA 58.682 33.333 13.15 0.00 42.58 2.92
456 457 8.391106 CGCTAATAGCATATTTTTAGGGATGAC 58.609 37.037 13.15 0.00 42.58 3.06
457 458 8.391106 GCTAATAGCATATTTTTAGGGATGACG 58.609 37.037 7.49 0.00 41.89 4.35
458 459 6.743575 ATAGCATATTTTTAGGGATGACGC 57.256 37.500 0.00 0.00 0.00 5.19
459 460 4.718961 AGCATATTTTTAGGGATGACGCT 58.281 39.130 0.00 0.00 41.97 5.07
460 461 5.865085 AGCATATTTTTAGGGATGACGCTA 58.135 37.500 0.00 0.00 39.88 4.26
461 462 6.476378 AGCATATTTTTAGGGATGACGCTAT 58.524 36.000 0.00 0.00 40.34 2.97
462 463 6.942576 AGCATATTTTTAGGGATGACGCTATT 59.057 34.615 0.00 0.00 40.34 1.73
463 464 7.448469 AGCATATTTTTAGGGATGACGCTATTT 59.552 33.333 0.00 0.00 40.34 1.40
464 465 8.082242 GCATATTTTTAGGGATGACGCTATTTT 58.918 33.333 0.00 0.00 40.34 1.82
465 466 9.398170 CATATTTTTAGGGATGACGCTATTTTG 57.602 33.333 0.00 0.00 40.34 2.44
466 467 6.827586 TTTTTAGGGATGACGCTATTTTGT 57.172 33.333 0.00 0.00 40.34 2.83
467 468 7.925043 TTTTTAGGGATGACGCTATTTTGTA 57.075 32.000 0.00 0.00 40.34 2.41
468 469 8.514330 TTTTTAGGGATGACGCTATTTTGTAT 57.486 30.769 0.00 0.00 40.34 2.29
469 470 9.616156 TTTTTAGGGATGACGCTATTTTGTATA 57.384 29.630 0.00 0.00 40.34 1.47
470 471 8.827177 TTTAGGGATGACGCTATTTTGTATAG 57.173 34.615 0.00 0.00 40.34 1.31
471 472 5.238583 AGGGATGACGCTATTTTGTATAGC 58.761 41.667 6.69 6.69 42.53 2.97
478 479 4.842139 GCTATTTTGTATAGCGCGCTAT 57.158 40.909 44.16 44.16 41.58 2.97
479 480 5.204673 GCTATTTTGTATAGCGCGCTATT 57.795 39.130 46.76 33.37 39.65 1.73
480 481 5.618561 GCTATTTTGTATAGCGCGCTATTT 58.381 37.500 46.76 32.85 39.65 1.40
481 482 6.077838 GCTATTTTGTATAGCGCGCTATTTT 58.922 36.000 46.76 32.19 39.65 1.82
482 483 6.577427 GCTATTTTGTATAGCGCGCTATTTTT 59.423 34.615 46.76 31.85 39.65 1.94
508 509 3.737559 TTGCTAAACCTCATCATGGGT 57.262 42.857 0.00 0.00 37.44 4.51
509 510 3.003394 TGCTAAACCTCATCATGGGTG 57.997 47.619 0.00 0.00 35.81 4.61
529 530 2.027625 GAGACGGGTTCGGTTGCAG 61.028 63.158 0.00 0.00 41.39 4.41
559 560 5.235186 GGTGATGTCAATGATTCTACTTCGG 59.765 44.000 0.00 0.00 0.00 4.30
564 565 6.898041 TGTCAATGATTCTACTTCGGTTTTG 58.102 36.000 0.00 0.00 0.00 2.44
565 566 6.072728 TGTCAATGATTCTACTTCGGTTTTGG 60.073 38.462 0.00 0.00 0.00 3.28
566 567 6.148811 GTCAATGATTCTACTTCGGTTTTGGA 59.851 38.462 0.00 0.00 0.00 3.53
569 570 4.994852 TGATTCTACTTCGGTTTTGGAGTG 59.005 41.667 0.00 0.00 0.00 3.51
570 571 4.675976 TTCTACTTCGGTTTTGGAGTGA 57.324 40.909 0.00 0.00 0.00 3.41
571 572 4.675976 TCTACTTCGGTTTTGGAGTGAA 57.324 40.909 0.00 0.00 0.00 3.18
572 573 4.628074 TCTACTTCGGTTTTGGAGTGAAG 58.372 43.478 0.00 0.00 41.31 3.02
573 574 3.277142 ACTTCGGTTTTGGAGTGAAGT 57.723 42.857 0.39 0.39 43.12 3.01
574 575 3.203716 ACTTCGGTTTTGGAGTGAAGTC 58.796 45.455 0.39 0.00 44.22 3.01
575 576 3.118371 ACTTCGGTTTTGGAGTGAAGTCT 60.118 43.478 0.39 0.00 44.22 3.24
576 577 2.833794 TCGGTTTTGGAGTGAAGTCTG 58.166 47.619 0.00 0.00 0.00 3.51
577 578 2.169769 TCGGTTTTGGAGTGAAGTCTGT 59.830 45.455 0.00 0.00 0.00 3.41
578 579 2.943033 CGGTTTTGGAGTGAAGTCTGTT 59.057 45.455 0.00 0.00 0.00 3.16
579 580 3.377172 CGGTTTTGGAGTGAAGTCTGTTT 59.623 43.478 0.00 0.00 0.00 2.83
580 581 4.142469 CGGTTTTGGAGTGAAGTCTGTTTT 60.142 41.667 0.00 0.00 0.00 2.43
581 582 5.065474 CGGTTTTGGAGTGAAGTCTGTTTTA 59.935 40.000 0.00 0.00 0.00 1.52
582 583 6.403855 CGGTTTTGGAGTGAAGTCTGTTTTAA 60.404 38.462 0.00 0.00 0.00 1.52
583 584 7.317390 GGTTTTGGAGTGAAGTCTGTTTTAAA 58.683 34.615 0.00 0.00 0.00 1.52
584 585 7.274904 GGTTTTGGAGTGAAGTCTGTTTTAAAC 59.725 37.037 0.20 0.20 0.00 2.01
585 586 7.696992 TTTGGAGTGAAGTCTGTTTTAAACT 57.303 32.000 9.33 0.00 0.00 2.66
586 587 7.696992 TTGGAGTGAAGTCTGTTTTAAACTT 57.303 32.000 9.33 0.00 36.00 2.66
587 588 7.696992 TGGAGTGAAGTCTGTTTTAAACTTT 57.303 32.000 9.33 0.00 33.54 2.66
588 589 7.535139 TGGAGTGAAGTCTGTTTTAAACTTTG 58.465 34.615 9.33 0.46 33.54 2.77
589 590 7.392113 TGGAGTGAAGTCTGTTTTAAACTTTGA 59.608 33.333 9.33 2.69 33.54 2.69
590 591 7.910683 GGAGTGAAGTCTGTTTTAAACTTTGAG 59.089 37.037 9.33 0.00 33.54 3.02
591 592 7.762382 AGTGAAGTCTGTTTTAAACTTTGAGG 58.238 34.615 9.33 0.00 33.54 3.86
592 593 7.393515 AGTGAAGTCTGTTTTAAACTTTGAGGT 59.606 33.333 9.33 0.00 33.54 3.85
593 594 8.027189 GTGAAGTCTGTTTTAAACTTTGAGGTT 58.973 33.333 9.33 2.68 33.54 3.50
594 595 8.026607 TGAAGTCTGTTTTAAACTTTGAGGTTG 58.973 33.333 9.33 0.00 33.54 3.77
595 596 7.462571 AGTCTGTTTTAAACTTTGAGGTTGT 57.537 32.000 9.33 0.00 0.00 3.32
596 597 8.570068 AGTCTGTTTTAAACTTTGAGGTTGTA 57.430 30.769 9.33 0.00 0.00 2.41
597 598 8.674607 AGTCTGTTTTAAACTTTGAGGTTGTAG 58.325 33.333 9.33 0.00 0.00 2.74
598 599 8.671028 GTCTGTTTTAAACTTTGAGGTTGTAGA 58.329 33.333 9.33 0.00 0.00 2.59
599 600 8.889717 TCTGTTTTAAACTTTGAGGTTGTAGAG 58.110 33.333 9.33 0.00 0.00 2.43
600 601 8.570068 TGTTTTAAACTTTGAGGTTGTAGAGT 57.430 30.769 9.33 0.00 0.00 3.24
601 602 8.455682 TGTTTTAAACTTTGAGGTTGTAGAGTG 58.544 33.333 9.33 0.00 0.00 3.51
602 603 6.613755 TTAAACTTTGAGGTTGTAGAGTGC 57.386 37.500 0.00 0.00 0.00 4.40
603 604 2.755650 ACTTTGAGGTTGTAGAGTGCG 58.244 47.619 0.00 0.00 0.00 5.34
604 605 2.069273 CTTTGAGGTTGTAGAGTGCGG 58.931 52.381 0.00 0.00 0.00 5.69
605 606 0.320421 TTGAGGTTGTAGAGTGCGGC 60.320 55.000 0.00 0.00 0.00 6.53
606 607 1.805945 GAGGTTGTAGAGTGCGGCG 60.806 63.158 0.51 0.51 0.00 6.46
607 608 3.488090 GGTTGTAGAGTGCGGCGC 61.488 66.667 27.44 27.44 0.00 6.53
608 609 2.736995 GTTGTAGAGTGCGGCGCA 60.737 61.111 33.07 33.07 35.60 6.09
609 610 2.029815 TTGTAGAGTGCGGCGCAA 59.970 55.556 38.05 19.16 41.47 4.85
610 611 1.595655 TTGTAGAGTGCGGCGCAAA 60.596 52.632 38.05 23.07 41.47 3.68
611 612 0.953471 TTGTAGAGTGCGGCGCAAAT 60.953 50.000 38.05 27.89 41.47 2.32
612 613 0.108567 TGTAGAGTGCGGCGCAAATA 60.109 50.000 38.05 24.83 41.47 1.40
613 614 1.003851 GTAGAGTGCGGCGCAAATAA 58.996 50.000 38.05 19.69 41.47 1.40
614 615 1.395608 GTAGAGTGCGGCGCAAATAAA 59.604 47.619 38.05 18.16 41.47 1.40
615 616 0.168128 AGAGTGCGGCGCAAATAAAC 59.832 50.000 38.05 22.75 41.47 2.01
616 617 0.796870 GAGTGCGGCGCAAATAAACC 60.797 55.000 38.05 21.96 41.47 3.27
617 618 1.211709 GTGCGGCGCAAATAAACCT 59.788 52.632 38.05 0.00 41.47 3.50
618 619 0.388006 GTGCGGCGCAAATAAACCTT 60.388 50.000 38.05 0.00 41.47 3.50
619 620 0.315568 TGCGGCGCAAATAAACCTTT 59.684 45.000 34.58 0.00 34.76 3.11
620 621 0.713329 GCGGCGCAAATAAACCTTTG 59.287 50.000 29.21 0.00 38.79 2.77
621 622 1.667467 GCGGCGCAAATAAACCTTTGA 60.667 47.619 29.21 0.00 38.17 2.69
622 623 2.874849 CGGCGCAAATAAACCTTTGAT 58.125 42.857 10.83 0.00 38.17 2.57
623 624 3.249917 CGGCGCAAATAAACCTTTGATT 58.750 40.909 10.83 0.00 38.17 2.57
624 625 3.677596 CGGCGCAAATAAACCTTTGATTT 59.322 39.130 10.83 0.00 38.17 2.17
625 626 4.151512 CGGCGCAAATAAACCTTTGATTTT 59.848 37.500 10.83 0.00 38.17 1.82
626 627 5.333721 CGGCGCAAATAAACCTTTGATTTTT 60.334 36.000 10.83 0.00 38.17 1.94
627 628 6.128795 CGGCGCAAATAAACCTTTGATTTTTA 60.129 34.615 10.83 0.00 38.17 1.52
628 629 7.569591 CGGCGCAAATAAACCTTTGATTTTTAA 60.570 33.333 10.83 0.00 38.17 1.52
629 630 8.070769 GGCGCAAATAAACCTTTGATTTTTAAA 58.929 29.630 10.83 0.00 38.17 1.52
630 631 9.605955 GCGCAAATAAACCTTTGATTTTTAAAT 57.394 25.926 0.30 0.00 38.17 1.40
637 638 4.920927 ACCTTTGATTTTTAAATCCGCGTG 59.079 37.500 4.92 0.00 43.19 5.34
645 646 1.619526 TAAATCCGCGTGCGTGACAC 61.620 55.000 13.70 0.00 46.45 3.67
670 671 0.533491 CCCAACATGTCAATGCAGGG 59.467 55.000 0.00 0.00 41.90 4.45
671 672 0.533491 CCAACATGTCAATGCAGGGG 59.467 55.000 0.00 0.00 37.29 4.79
672 673 0.108520 CAACATGTCAATGCAGGGGC 60.109 55.000 0.00 0.00 37.29 5.80
693 694 5.238583 GGCAGAGCTACAAGAACTTAAGAA 58.761 41.667 10.09 0.00 0.00 2.52
706 707 6.507023 AGAACTTAAGAACAAAATGTGGCAG 58.493 36.000 10.09 0.00 0.00 4.85
781 783 1.595109 GCTTTTGGGCAGCAACCAC 60.595 57.895 0.00 0.00 37.82 4.16
858 869 3.653344 TCGTCCAAGCTGTGATATATGC 58.347 45.455 0.00 0.00 0.00 3.14
953 964 2.558350 CCCATCTTCCCTTGCCTTTCTT 60.558 50.000 0.00 0.00 0.00 2.52
955 966 4.344104 CCATCTTCCCTTGCCTTTCTTAA 58.656 43.478 0.00 0.00 0.00 1.85
961 972 2.351738 CCCTTGCCTTTCTTAAACGCAG 60.352 50.000 0.00 0.00 34.70 5.18
964 975 1.877443 TGCCTTTCTTAAACGCAGTCC 59.123 47.619 0.00 0.00 45.00 3.85
980 991 0.385473 GTCCACAACAAACGCATCCG 60.385 55.000 0.00 0.00 41.14 4.18
1022 1036 5.007724 CCTTATTAAAACGAGCCCATCTCAC 59.992 44.000 0.00 0.00 41.98 3.51
1077 1097 2.871182 TCATCCTCAGCACGTCATAC 57.129 50.000 0.00 0.00 0.00 2.39
1093 1133 1.059692 CATACGAAGTGACAAGCAGCG 59.940 52.381 0.00 0.00 45.73 5.18
1204 1247 0.748729 CTTACTCTCCTCCGCCGTCT 60.749 60.000 0.00 0.00 0.00 4.18
1717 1799 2.284405 CTGGGGTGGTACCTCCGT 60.284 66.667 23.46 0.00 38.22 4.69
1871 1967 1.453155 AGAAACGGTGTCATGCCATC 58.547 50.000 0.37 0.00 0.00 3.51
1913 2013 2.228582 CGAGATGGATTGAGCGAGAGAT 59.771 50.000 0.00 0.00 0.00 2.75
1914 2014 3.577667 GAGATGGATTGAGCGAGAGATG 58.422 50.000 0.00 0.00 0.00 2.90
1915 2015 2.964464 AGATGGATTGAGCGAGAGATGT 59.036 45.455 0.00 0.00 0.00 3.06
1916 2016 4.148079 AGATGGATTGAGCGAGAGATGTA 58.852 43.478 0.00 0.00 0.00 2.29
1918 2018 3.291584 TGGATTGAGCGAGAGATGTACT 58.708 45.455 0.00 0.00 0.00 2.73
1927 2027 3.181485 GCGAGAGATGTACTTAGGCTGTT 60.181 47.826 0.00 0.00 0.00 3.16
1931 2031 6.360370 AGAGATGTACTTAGGCTGTTTTGA 57.640 37.500 0.00 0.00 0.00 2.69
1948 2048 5.105797 TGTTTTGAGTTTGTTGAGAGCATGT 60.106 36.000 0.00 0.00 0.00 3.21
1952 2056 3.282021 AGTTTGTTGAGAGCATGTGTGT 58.718 40.909 0.00 0.00 0.00 3.72
1960 2064 3.057245 TGAGAGCATGTGTGTCTGTACTC 60.057 47.826 0.00 0.00 0.00 2.59
1961 2065 3.161067 AGAGCATGTGTGTCTGTACTCT 58.839 45.455 0.00 0.00 0.00 3.24
1962 2066 3.056962 AGAGCATGTGTGTCTGTACTCTG 60.057 47.826 0.00 0.00 32.27 3.35
1963 2067 2.630098 AGCATGTGTGTCTGTACTCTGT 59.370 45.455 0.00 0.00 0.00 3.41
1964 2068 3.826729 AGCATGTGTGTCTGTACTCTGTA 59.173 43.478 0.00 0.00 0.00 2.74
1965 2069 4.082517 AGCATGTGTGTCTGTACTCTGTAG 60.083 45.833 0.00 0.00 0.00 2.74
1966 2070 4.321304 GCATGTGTGTCTGTACTCTGTAGT 60.321 45.833 0.00 0.00 39.91 2.73
1967 2071 5.106277 GCATGTGTGTCTGTACTCTGTAGTA 60.106 44.000 0.00 0.00 37.15 1.82
1970 2074 7.606858 TGTGTGTCTGTACTCTGTAGTATAC 57.393 40.000 0.00 0.00 40.30 1.47
1971 2075 6.312180 TGTGTGTCTGTACTCTGTAGTATACG 59.688 42.308 0.00 0.00 46.99 3.06
1980 2084 9.605275 TGTACTCTGTAGTATACGTACTTGATT 57.395 33.333 0.00 9.08 46.99 2.57
1998 2105 8.782533 ACTTGATTAAATTTTGAGACGTTGAC 57.217 30.769 0.00 0.00 0.00 3.18
1999 2106 8.621286 ACTTGATTAAATTTTGAGACGTTGACT 58.379 29.630 0.00 0.00 0.00 3.41
2004 2111 4.552166 ATTTTGAGACGTTGACTGTTGG 57.448 40.909 0.00 0.00 0.00 3.77
2011 2118 5.995282 TGAGACGTTGACTGTTGGATTATTT 59.005 36.000 0.00 0.00 0.00 1.40
2021 2128 6.267817 ACTGTTGGATTATTTGATGATTGCG 58.732 36.000 0.00 0.00 0.00 4.85
2022 2129 5.042593 TGTTGGATTATTTGATGATTGCGC 58.957 37.500 0.00 0.00 0.00 6.09
2023 2130 4.915158 TGGATTATTTGATGATTGCGCA 57.085 36.364 5.66 5.66 0.00 6.09
2024 2131 5.456548 TGGATTATTTGATGATTGCGCAT 57.543 34.783 12.75 0.40 0.00 4.73
2025 2132 5.845103 TGGATTATTTGATGATTGCGCATT 58.155 33.333 12.75 8.03 0.00 3.56
2026 2133 5.692654 TGGATTATTTGATGATTGCGCATTG 59.307 36.000 12.75 0.00 0.00 2.82
2027 2134 5.389098 GGATTATTTGATGATTGCGCATTGC 60.389 40.000 12.75 4.06 46.70 3.56
2028 2135 2.658373 TTTGATGATTGCGCATTGCT 57.342 40.000 12.75 0.00 46.63 3.91
2029 2136 3.779271 TTTGATGATTGCGCATTGCTA 57.221 38.095 12.75 0.00 46.63 3.49
2030 2137 3.343380 TTGATGATTGCGCATTGCTAG 57.657 42.857 12.75 0.00 46.63 3.42
2031 2138 2.291365 TGATGATTGCGCATTGCTAGT 58.709 42.857 12.75 0.00 46.63 2.57
2032 2139 2.032426 TGATGATTGCGCATTGCTAGTG 59.968 45.455 12.75 0.00 46.63 2.74
2033 2140 1.736612 TGATTGCGCATTGCTAGTGA 58.263 45.000 12.75 0.00 46.63 3.41
2034 2141 1.398041 TGATTGCGCATTGCTAGTGAC 59.602 47.619 12.75 0.00 46.63 3.67
2035 2142 0.374758 ATTGCGCATTGCTAGTGACG 59.625 50.000 12.75 0.00 46.63 4.35
2036 2143 0.948623 TTGCGCATTGCTAGTGACGT 60.949 50.000 12.75 0.00 46.63 4.34
2037 2144 1.345176 GCGCATTGCTAGTGACGTC 59.655 57.895 9.11 9.11 41.73 4.34
2038 2145 1.625870 CGCATTGCTAGTGACGTCG 59.374 57.895 11.62 0.00 0.00 5.12
2039 2146 0.796870 CGCATTGCTAGTGACGTCGA 60.797 55.000 11.62 0.00 0.00 4.20
2040 2147 0.917259 GCATTGCTAGTGACGTCGAG 59.083 55.000 11.62 9.18 0.00 4.04
2041 2148 0.917259 CATTGCTAGTGACGTCGAGC 59.083 55.000 22.90 22.90 36.78 5.03
2042 2149 0.811915 ATTGCTAGTGACGTCGAGCT 59.188 50.000 27.02 19.69 37.08 4.09
2043 2150 0.596577 TTGCTAGTGACGTCGAGCTT 59.403 50.000 27.02 9.46 37.08 3.74
2044 2151 0.596577 TGCTAGTGACGTCGAGCTTT 59.403 50.000 27.02 8.02 37.08 3.51
2045 2152 1.261097 GCTAGTGACGTCGAGCTTTC 58.739 55.000 22.58 8.81 34.23 2.62
2046 2153 1.525596 CTAGTGACGTCGAGCTTTCG 58.474 55.000 11.62 0.00 0.00 3.46
2047 2154 0.870393 TAGTGACGTCGAGCTTTCGT 59.130 50.000 11.62 10.55 40.49 3.85
2048 2155 0.660595 AGTGACGTCGAGCTTTCGTG 60.661 55.000 11.62 3.47 37.92 4.35
2049 2156 0.659417 GTGACGTCGAGCTTTCGTGA 60.659 55.000 11.62 5.64 37.92 4.35
2050 2157 0.385598 TGACGTCGAGCTTTCGTGAG 60.386 55.000 11.62 2.45 37.92 3.51
2051 2158 0.385723 GACGTCGAGCTTTCGTGAGT 60.386 55.000 14.41 5.11 37.92 3.41
2052 2159 0.660595 ACGTCGAGCTTTCGTGAGTG 60.661 55.000 0.00 0.00 36.46 3.51
2053 2160 0.385598 CGTCGAGCTTTCGTGAGTGA 60.386 55.000 0.00 0.00 0.00 3.41
2054 2161 1.767289 GTCGAGCTTTCGTGAGTGAA 58.233 50.000 0.00 0.00 0.00 3.18
2055 2162 2.329379 GTCGAGCTTTCGTGAGTGAAT 58.671 47.619 0.00 0.00 0.00 2.57
2056 2163 3.499048 GTCGAGCTTTCGTGAGTGAATA 58.501 45.455 0.00 0.00 0.00 1.75
2057 2164 3.544285 GTCGAGCTTTCGTGAGTGAATAG 59.456 47.826 0.00 0.00 0.00 1.73
2058 2165 2.280183 CGAGCTTTCGTGAGTGAATAGC 59.720 50.000 0.00 0.00 34.80 2.97
2059 2166 3.254060 GAGCTTTCGTGAGTGAATAGCA 58.746 45.455 0.00 0.00 35.91 3.49
2060 2167 3.257393 AGCTTTCGTGAGTGAATAGCAG 58.743 45.455 0.00 0.00 35.91 4.24
2061 2168 3.056536 AGCTTTCGTGAGTGAATAGCAGA 60.057 43.478 0.00 0.00 35.91 4.26
2062 2169 3.679980 GCTTTCGTGAGTGAATAGCAGAA 59.320 43.478 0.00 0.00 34.76 3.02
2063 2170 4.152402 GCTTTCGTGAGTGAATAGCAGAAA 59.848 41.667 0.00 0.00 34.76 2.52
2064 2171 5.334105 GCTTTCGTGAGTGAATAGCAGAAAA 60.334 40.000 0.00 0.00 34.76 2.29
2065 2172 5.591643 TTCGTGAGTGAATAGCAGAAAAC 57.408 39.130 0.00 0.00 0.00 2.43
2066 2173 4.883083 TCGTGAGTGAATAGCAGAAAACT 58.117 39.130 0.00 0.00 0.00 2.66
2067 2174 6.020971 TCGTGAGTGAATAGCAGAAAACTA 57.979 37.500 0.00 0.00 0.00 2.24
2068 2175 5.862323 TCGTGAGTGAATAGCAGAAAACTAC 59.138 40.000 0.00 0.00 0.00 2.73
2069 2176 5.062308 CGTGAGTGAATAGCAGAAAACTACC 59.938 44.000 0.00 0.00 0.00 3.18
2070 2177 5.932303 GTGAGTGAATAGCAGAAAACTACCA 59.068 40.000 0.00 0.00 0.00 3.25
2071 2178 5.932303 TGAGTGAATAGCAGAAAACTACCAC 59.068 40.000 0.00 0.00 31.70 4.16
2072 2179 5.865085 AGTGAATAGCAGAAAACTACCACA 58.135 37.500 0.00 0.00 32.92 4.17
2073 2180 6.476378 AGTGAATAGCAGAAAACTACCACAT 58.524 36.000 0.00 0.00 32.92 3.21
2074 2181 6.942576 AGTGAATAGCAGAAAACTACCACATT 59.057 34.615 0.00 0.00 32.92 2.71
2075 2182 8.100791 AGTGAATAGCAGAAAACTACCACATTA 58.899 33.333 0.00 0.00 32.92 1.90
2076 2183 8.391106 GTGAATAGCAGAAAACTACCACATTAG 58.609 37.037 0.00 0.00 31.80 1.73
2077 2184 6.927294 ATAGCAGAAAACTACCACATTAGC 57.073 37.500 0.00 0.00 0.00 3.09
2078 2185 3.684788 AGCAGAAAACTACCACATTAGCG 59.315 43.478 0.00 0.00 0.00 4.26
2079 2186 3.727970 GCAGAAAACTACCACATTAGCGC 60.728 47.826 0.00 0.00 0.00 5.92
2080 2187 3.435327 CAGAAAACTACCACATTAGCGCA 59.565 43.478 11.47 0.00 0.00 6.09
2081 2188 4.094887 CAGAAAACTACCACATTAGCGCAT 59.905 41.667 11.47 0.00 0.00 4.73
2082 2189 5.293324 CAGAAAACTACCACATTAGCGCATA 59.707 40.000 11.47 0.00 0.00 3.14
2083 2190 5.523916 AGAAAACTACCACATTAGCGCATAG 59.476 40.000 11.47 0.00 0.00 2.23
2084 2191 3.386768 ACTACCACATTAGCGCATAGG 57.613 47.619 11.47 4.90 0.00 2.57
2085 2192 2.698797 ACTACCACATTAGCGCATAGGT 59.301 45.455 11.47 11.04 0.00 3.08
2086 2193 2.710096 ACCACATTAGCGCATAGGTT 57.290 45.000 11.47 0.00 0.00 3.50
2087 2194 2.999331 ACCACATTAGCGCATAGGTTT 58.001 42.857 11.47 0.00 0.00 3.27
2088 2195 2.682856 ACCACATTAGCGCATAGGTTTG 59.317 45.455 11.47 0.95 0.00 2.93
2089 2196 2.541588 CCACATTAGCGCATAGGTTTGC 60.542 50.000 11.47 0.00 39.29 3.68
2096 2203 3.713936 GCATAGGTTTGCGGGAAAC 57.286 52.632 15.71 15.71 42.97 2.78
2097 2204 0.885196 GCATAGGTTTGCGGGAAACA 59.115 50.000 23.50 7.42 45.15 2.83
2098 2205 1.402325 GCATAGGTTTGCGGGAAACAC 60.402 52.381 23.50 14.18 45.15 3.32
2099 2206 2.159382 CATAGGTTTGCGGGAAACACT 58.841 47.619 23.50 19.25 45.15 3.55
2100 2207 1.886886 TAGGTTTGCGGGAAACACTC 58.113 50.000 23.50 9.09 45.15 3.51
2101 2208 0.182775 AGGTTTGCGGGAAACACTCT 59.817 50.000 23.50 11.01 45.15 3.24
2102 2209 1.029681 GGTTTGCGGGAAACACTCTT 58.970 50.000 23.50 0.00 45.15 2.85
2103 2210 1.407618 GGTTTGCGGGAAACACTCTTT 59.592 47.619 23.50 0.00 45.15 2.52
2104 2211 2.159156 GGTTTGCGGGAAACACTCTTTT 60.159 45.455 23.50 0.00 45.15 2.27
2105 2212 3.067040 GGTTTGCGGGAAACACTCTTTTA 59.933 43.478 23.50 0.00 45.15 1.52
2106 2213 3.974871 TTGCGGGAAACACTCTTTTAC 57.025 42.857 0.00 0.00 0.00 2.01
2107 2214 1.868498 TGCGGGAAACACTCTTTTACG 59.132 47.619 0.00 0.00 0.00 3.18
2108 2215 2.137523 GCGGGAAACACTCTTTTACGA 58.862 47.619 0.00 0.00 0.00 3.43
2109 2216 2.545106 GCGGGAAACACTCTTTTACGAA 59.455 45.455 0.00 0.00 0.00 3.85
2110 2217 3.187842 GCGGGAAACACTCTTTTACGAAT 59.812 43.478 0.00 0.00 0.00 3.34
2111 2218 4.319984 GCGGGAAACACTCTTTTACGAATT 60.320 41.667 0.00 0.00 0.00 2.17
2112 2219 5.754778 CGGGAAACACTCTTTTACGAATTT 58.245 37.500 0.00 0.00 0.00 1.82
2113 2220 5.623673 CGGGAAACACTCTTTTACGAATTTG 59.376 40.000 0.00 0.00 0.00 2.32
2114 2221 6.512091 CGGGAAACACTCTTTTACGAATTTGA 60.512 38.462 0.00 0.00 0.00 2.69
2115 2222 6.856426 GGGAAACACTCTTTTACGAATTTGAG 59.144 38.462 0.00 0.00 0.00 3.02
2116 2223 6.359883 GGAAACACTCTTTTACGAATTTGAGC 59.640 38.462 0.00 0.00 0.00 4.26
2117 2224 5.358298 ACACTCTTTTACGAATTTGAGCC 57.642 39.130 0.00 0.00 0.00 4.70
2118 2225 4.819630 ACACTCTTTTACGAATTTGAGCCA 59.180 37.500 0.00 0.00 0.00 4.75
2119 2226 5.049405 ACACTCTTTTACGAATTTGAGCCAG 60.049 40.000 0.00 0.00 0.00 4.85
2120 2227 5.179368 CACTCTTTTACGAATTTGAGCCAGA 59.821 40.000 0.00 0.00 0.00 3.86
2121 2228 5.763204 ACTCTTTTACGAATTTGAGCCAGAA 59.237 36.000 0.00 0.00 0.00 3.02
2122 2229 6.262273 ACTCTTTTACGAATTTGAGCCAGAAA 59.738 34.615 0.00 0.00 0.00 2.52
2123 2230 6.435428 TCTTTTACGAATTTGAGCCAGAAAC 58.565 36.000 0.00 0.00 0.00 2.78
2124 2231 4.759516 TTACGAATTTGAGCCAGAAACC 57.240 40.909 0.00 0.00 0.00 3.27
2125 2232 2.582052 ACGAATTTGAGCCAGAAACCA 58.418 42.857 0.00 0.00 0.00 3.67
2126 2233 2.293399 ACGAATTTGAGCCAGAAACCAC 59.707 45.455 0.00 0.00 0.00 4.16
2127 2234 2.554032 CGAATTTGAGCCAGAAACCACT 59.446 45.455 0.00 0.00 0.00 4.00
2128 2235 3.610114 CGAATTTGAGCCAGAAACCACTG 60.610 47.826 0.00 0.00 37.61 3.66
2129 2236 2.727123 TTTGAGCCAGAAACCACTGA 57.273 45.000 0.00 0.00 39.94 3.41
2130 2237 2.957402 TTGAGCCAGAAACCACTGAT 57.043 45.000 0.00 0.00 39.94 2.90
2131 2238 2.957402 TGAGCCAGAAACCACTGATT 57.043 45.000 0.00 0.00 39.94 2.57
2132 2239 3.228188 TGAGCCAGAAACCACTGATTT 57.772 42.857 0.00 0.00 39.94 2.17
2133 2240 3.565307 TGAGCCAGAAACCACTGATTTT 58.435 40.909 0.00 0.00 39.94 1.82
2134 2241 3.960102 TGAGCCAGAAACCACTGATTTTT 59.040 39.130 0.00 0.00 39.94 1.94
2135 2242 4.037923 TGAGCCAGAAACCACTGATTTTTC 59.962 41.667 0.00 0.00 39.94 2.29
2136 2243 3.004734 AGCCAGAAACCACTGATTTTTCG 59.995 43.478 0.00 0.00 39.94 3.46
2137 2244 3.004315 GCCAGAAACCACTGATTTTTCGA 59.996 43.478 0.00 0.00 39.94 3.71
2138 2245 4.537015 CCAGAAACCACTGATTTTTCGAC 58.463 43.478 0.00 0.00 39.94 4.20
2139 2246 4.275936 CCAGAAACCACTGATTTTTCGACT 59.724 41.667 0.00 0.00 39.94 4.18
2140 2247 5.468746 CCAGAAACCACTGATTTTTCGACTA 59.531 40.000 0.00 0.00 39.94 2.59
2141 2248 6.017440 CCAGAAACCACTGATTTTTCGACTAA 60.017 38.462 0.00 0.00 39.94 2.24
2142 2249 7.308589 CCAGAAACCACTGATTTTTCGACTAAT 60.309 37.037 0.00 0.00 39.94 1.73
2143 2250 7.746475 CAGAAACCACTGATTTTTCGACTAATC 59.254 37.037 10.36 10.36 39.94 1.75
2144 2251 7.661847 AGAAACCACTGATTTTTCGACTAATCT 59.338 33.333 15.74 0.00 34.94 2.40
2145 2252 7.745620 AACCACTGATTTTTCGACTAATCTT 57.254 32.000 15.74 4.77 33.08 2.40
2146 2253 7.745620 ACCACTGATTTTTCGACTAATCTTT 57.254 32.000 15.74 4.51 33.08 2.52
2147 2254 8.166422 ACCACTGATTTTTCGACTAATCTTTT 57.834 30.769 15.74 2.72 33.08 2.27
2148 2255 8.076178 ACCACTGATTTTTCGACTAATCTTTTG 58.924 33.333 15.74 11.06 33.08 2.44
2149 2256 7.061094 CCACTGATTTTTCGACTAATCTTTTGC 59.939 37.037 15.74 0.00 33.08 3.68
2150 2257 7.591057 CACTGATTTTTCGACTAATCTTTTGCA 59.409 33.333 15.74 0.00 33.08 4.08
2151 2258 8.134895 ACTGATTTTTCGACTAATCTTTTGCAA 58.865 29.630 15.74 0.00 33.08 4.08
2152 2259 8.864069 TGATTTTTCGACTAATCTTTTGCAAA 57.136 26.923 8.05 8.05 33.08 3.68
2153 2260 9.307121 TGATTTTTCGACTAATCTTTTGCAAAA 57.693 25.926 22.61 22.61 33.08 2.44
2173 2280 4.552166 AAAACACTGATCGGTCTGTTTG 57.448 40.909 18.78 4.61 34.71 2.93
2174 2281 2.169832 ACACTGATCGGTCTGTTTGG 57.830 50.000 3.54 0.00 34.71 3.28
2175 2282 1.691976 ACACTGATCGGTCTGTTTGGA 59.308 47.619 3.54 0.00 34.71 3.53
2176 2283 2.069273 CACTGATCGGTCTGTTTGGAC 58.931 52.381 3.54 0.00 34.71 4.02
2177 2284 1.691976 ACTGATCGGTCTGTTTGGACA 59.308 47.619 0.00 0.00 37.91 4.02
2178 2285 2.104111 ACTGATCGGTCTGTTTGGACAA 59.896 45.455 0.00 0.00 37.91 3.18
2179 2286 3.244561 ACTGATCGGTCTGTTTGGACAAT 60.245 43.478 0.00 0.00 37.91 2.71
2180 2287 3.750371 TGATCGGTCTGTTTGGACAATT 58.250 40.909 0.00 0.00 37.91 2.32
2181 2288 4.141287 TGATCGGTCTGTTTGGACAATTT 58.859 39.130 0.00 0.00 37.91 1.82
2182 2289 5.309638 TGATCGGTCTGTTTGGACAATTTA 58.690 37.500 0.00 0.00 37.91 1.40
2183 2290 5.765677 TGATCGGTCTGTTTGGACAATTTAA 59.234 36.000 0.00 0.00 37.91 1.52
2184 2291 5.427036 TCGGTCTGTTTGGACAATTTAAC 57.573 39.130 0.00 0.00 37.91 2.01
2185 2292 4.276431 TCGGTCTGTTTGGACAATTTAACC 59.724 41.667 0.00 0.00 37.91 2.85
2186 2293 4.036971 CGGTCTGTTTGGACAATTTAACCA 59.963 41.667 0.00 0.00 37.91 3.67
2187 2294 5.278758 CGGTCTGTTTGGACAATTTAACCAT 60.279 40.000 0.00 0.00 37.91 3.55
2188 2295 5.925969 GGTCTGTTTGGACAATTTAACCATG 59.074 40.000 0.00 0.00 37.91 3.66
2189 2296 6.239176 GGTCTGTTTGGACAATTTAACCATGA 60.239 38.462 0.00 0.00 37.91 3.07
2190 2297 7.378181 GTCTGTTTGGACAATTTAACCATGAT 58.622 34.615 0.00 0.00 34.85 2.45
2191 2298 7.872483 GTCTGTTTGGACAATTTAACCATGATT 59.128 33.333 0.00 0.00 34.85 2.57
2192 2299 9.083422 TCTGTTTGGACAATTTAACCATGATTA 57.917 29.630 0.00 0.00 34.85 1.75
2193 2300 9.874205 CTGTTTGGACAATTTAACCATGATTAT 57.126 29.630 0.00 0.00 34.85 1.28
2194 2301 9.650539 TGTTTGGACAATTTAACCATGATTATG 57.349 29.630 0.00 0.00 33.56 1.90
2195 2302 9.868277 GTTTGGACAATTTAACCATGATTATGA 57.132 29.630 0.00 0.00 36.36 2.15
2196 2303 9.868277 TTTGGACAATTTAACCATGATTATGAC 57.132 29.630 0.00 0.00 36.36 3.06
2197 2304 8.586879 TGGACAATTTAACCATGATTATGACA 57.413 30.769 0.00 0.00 36.36 3.58
2198 2305 9.199645 TGGACAATTTAACCATGATTATGACAT 57.800 29.630 0.00 0.00 36.36 3.06
2199 2306 9.467258 GGACAATTTAACCATGATTATGACATG 57.533 33.333 0.00 0.00 42.99 3.21
2201 2308 9.806203 ACAATTTAACCATGATTATGACATGTG 57.194 29.630 1.15 0.00 42.16 3.21
2202 2309 9.251792 CAATTTAACCATGATTATGACATGTGG 57.748 33.333 1.15 0.00 42.16 4.17
2203 2310 6.957920 TTAACCATGATTATGACATGTGGG 57.042 37.500 1.15 0.00 42.16 4.61
2204 2311 3.836146 ACCATGATTATGACATGTGGGG 58.164 45.455 1.15 0.00 42.16 4.96
2205 2312 2.559668 CCATGATTATGACATGTGGGGC 59.440 50.000 1.15 0.00 42.16 5.80
2206 2313 2.363306 TGATTATGACATGTGGGGCC 57.637 50.000 1.15 0.00 0.00 5.80
2207 2314 1.852309 TGATTATGACATGTGGGGCCT 59.148 47.619 1.15 0.00 0.00 5.19
2208 2315 2.233271 GATTATGACATGTGGGGCCTG 58.767 52.381 1.15 0.00 0.00 4.85
2209 2316 0.998928 TTATGACATGTGGGGCCTGT 59.001 50.000 1.15 0.00 0.00 4.00
2210 2317 1.886422 TATGACATGTGGGGCCTGTA 58.114 50.000 1.15 0.00 0.00 2.74
2211 2318 1.225373 ATGACATGTGGGGCCTGTAT 58.775 50.000 1.15 0.00 0.00 2.29
2212 2319 0.998928 TGACATGTGGGGCCTGTATT 59.001 50.000 1.15 0.00 0.00 1.89
2213 2320 1.357420 TGACATGTGGGGCCTGTATTT 59.643 47.619 1.15 0.00 0.00 1.40
2214 2321 1.750778 GACATGTGGGGCCTGTATTTG 59.249 52.381 1.15 0.00 0.00 2.32
2215 2322 1.357420 ACATGTGGGGCCTGTATTTGA 59.643 47.619 0.84 0.00 0.00 2.69
2216 2323 2.024080 ACATGTGGGGCCTGTATTTGAT 60.024 45.455 0.84 0.00 0.00 2.57
2217 2324 2.142356 TGTGGGGCCTGTATTTGATG 57.858 50.000 0.84 0.00 0.00 3.07
2218 2325 1.638070 TGTGGGGCCTGTATTTGATGA 59.362 47.619 0.84 0.00 0.00 2.92
2219 2326 2.244510 TGTGGGGCCTGTATTTGATGAT 59.755 45.455 0.84 0.00 0.00 2.45
2220 2327 2.624838 GTGGGGCCTGTATTTGATGATG 59.375 50.000 0.84 0.00 0.00 3.07
2221 2328 2.244510 TGGGGCCTGTATTTGATGATGT 59.755 45.455 0.84 0.00 0.00 3.06
2222 2329 2.624838 GGGGCCTGTATTTGATGATGTG 59.375 50.000 0.84 0.00 0.00 3.21
2223 2330 2.624838 GGGCCTGTATTTGATGATGTGG 59.375 50.000 0.84 0.00 0.00 4.17
2224 2331 2.035066 GGCCTGTATTTGATGATGTGGC 59.965 50.000 0.00 0.00 37.34 5.01
2225 2332 2.689471 GCCTGTATTTGATGATGTGGCA 59.311 45.455 0.00 0.00 37.91 4.92
2226 2333 3.319972 GCCTGTATTTGATGATGTGGCAT 59.680 43.478 0.00 0.00 37.91 4.40
2227 2334 4.520111 GCCTGTATTTGATGATGTGGCATA 59.480 41.667 0.00 0.00 37.91 3.14
2228 2335 5.009911 GCCTGTATTTGATGATGTGGCATAA 59.990 40.000 0.00 0.00 37.91 1.90
2229 2336 6.441274 CCTGTATTTGATGATGTGGCATAAC 58.559 40.000 0.00 0.00 0.00 1.89
2230 2337 6.263842 CCTGTATTTGATGATGTGGCATAACT 59.736 38.462 0.00 0.00 0.00 2.24
2231 2338 7.030075 TGTATTTGATGATGTGGCATAACTG 57.970 36.000 0.00 0.00 0.00 3.16
2232 2339 6.602803 TGTATTTGATGATGTGGCATAACTGT 59.397 34.615 0.00 0.00 0.00 3.55
2233 2340 5.565592 TTTGATGATGTGGCATAACTGTC 57.434 39.130 0.00 0.00 0.00 3.51
2234 2341 4.219264 TGATGATGTGGCATAACTGTCA 57.781 40.909 0.00 0.00 33.71 3.58
2235 2342 4.587891 TGATGATGTGGCATAACTGTCAA 58.412 39.130 0.00 0.00 39.07 3.18
2236 2343 4.395854 TGATGATGTGGCATAACTGTCAAC 59.604 41.667 0.00 0.00 39.07 3.18
2237 2344 3.749226 TGATGTGGCATAACTGTCAACA 58.251 40.909 0.00 0.00 39.07 3.33
2238 2345 4.140536 TGATGTGGCATAACTGTCAACAA 58.859 39.130 0.00 0.00 39.07 2.83
2239 2346 3.980646 TGTGGCATAACTGTCAACAAC 57.019 42.857 0.00 0.00 39.07 3.32
2240 2347 2.621055 TGTGGCATAACTGTCAACAACC 59.379 45.455 0.00 0.00 39.07 3.77
2241 2348 1.876799 TGGCATAACTGTCAACAACCG 59.123 47.619 0.00 0.00 33.02 4.44
2242 2349 1.199097 GGCATAACTGTCAACAACCGG 59.801 52.381 0.00 0.00 0.00 5.28
2948 3067 4.295199 GGGCCTTTGGTCCCGGTT 62.295 66.667 0.84 0.00 42.67 4.44
2949 3068 2.989253 GGCCTTTGGTCCCGGTTG 60.989 66.667 0.00 0.00 0.00 3.77
2950 3069 2.989253 GCCTTTGGTCCCGGTTGG 60.989 66.667 0.00 0.00 0.00 3.77
2951 3070 2.518933 CCTTTGGTCCCGGTTGGT 59.481 61.111 0.00 0.00 34.77 3.67
2952 3071 1.901464 CCTTTGGTCCCGGTTGGTG 60.901 63.158 0.00 0.00 34.77 4.17
2953 3072 1.901464 CTTTGGTCCCGGTTGGTGG 60.901 63.158 0.00 0.00 34.77 4.61
2954 3073 4.589675 TTGGTCCCGGTTGGTGGC 62.590 66.667 0.00 0.00 34.77 5.01
2957 3076 4.265056 GTCCCGGTTGGTGGCACT 62.265 66.667 18.45 0.00 34.77 4.40
2958 3077 2.527123 TCCCGGTTGGTGGCACTA 60.527 61.111 18.45 8.99 34.77 2.74
2959 3078 2.148052 TCCCGGTTGGTGGCACTAA 61.148 57.895 18.45 15.60 34.77 2.24
2960 3079 1.969589 CCCGGTTGGTGGCACTAAC 60.970 63.158 31.44 31.44 38.63 2.34
2963 3082 3.663202 GTTGGTGGCACTAACCGG 58.337 61.111 29.86 0.00 40.86 5.28
2964 3083 1.969589 GTTGGTGGCACTAACCGGG 60.970 63.158 29.86 0.00 40.86 5.73
2965 3084 2.148052 TTGGTGGCACTAACCGGGA 61.148 57.895 18.45 0.00 40.86 5.14
2966 3085 2.046604 GGTGGCACTAACCGGGAC 60.047 66.667 18.45 0.00 0.00 4.46
2967 3086 2.046604 GTGGCACTAACCGGGACC 60.047 66.667 11.13 0.00 0.00 4.46
2968 3087 2.527123 TGGCACTAACCGGGACCA 60.527 61.111 6.32 0.26 0.00 4.02
2969 3088 2.148052 TGGCACTAACCGGGACCAA 61.148 57.895 6.32 0.00 0.00 3.67
2970 3089 1.301954 GGCACTAACCGGGACCAAT 59.698 57.895 6.32 0.00 0.00 3.16
2971 3090 0.542805 GGCACTAACCGGGACCAATA 59.457 55.000 6.32 0.00 0.00 1.90
2972 3091 1.474498 GGCACTAACCGGGACCAATAG 60.474 57.143 6.32 0.84 0.00 1.73
2973 3092 1.474498 GCACTAACCGGGACCAATAGG 60.474 57.143 6.32 0.00 42.21 2.57
2974 3093 0.835276 ACTAACCGGGACCAATAGGC 59.165 55.000 6.32 0.00 39.06 3.93
2975 3094 0.834612 CTAACCGGGACCAATAGGCA 59.165 55.000 6.32 0.00 39.06 4.75
2976 3095 1.420138 CTAACCGGGACCAATAGGCAT 59.580 52.381 6.32 0.00 39.06 4.40
2977 3096 0.182775 AACCGGGACCAATAGGCATC 59.817 55.000 6.32 0.00 39.06 3.91
2978 3097 1.073199 CCGGGACCAATAGGCATCC 59.927 63.158 0.00 0.00 39.06 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 9.855021 GTGCTACTTATTTGGTTATTGTCAAAT 57.145 29.630 0.00 0.00 43.42 2.32
38 39 8.851145 TGTGCTACTTATTTGGTTATTGTCAAA 58.149 29.630 0.00 0.00 37.29 2.69
39 40 8.397575 TGTGCTACTTATTTGGTTATTGTCAA 57.602 30.769 0.00 0.00 0.00 3.18
40 41 7.987750 TGTGCTACTTATTTGGTTATTGTCA 57.012 32.000 0.00 0.00 0.00 3.58
41 42 9.855021 ATTTGTGCTACTTATTTGGTTATTGTC 57.145 29.630 0.00 0.00 0.00 3.18
49 50 9.023967 GCTTTCATATTTGTGCTACTTATTTGG 57.976 33.333 0.00 0.00 0.00 3.28
50 51 9.571810 TGCTTTCATATTTGTGCTACTTATTTG 57.428 29.630 0.00 0.00 0.00 2.32
52 53 9.573133 GTTGCTTTCATATTTGTGCTACTTATT 57.427 29.630 0.00 0.00 0.00 1.40
53 54 8.190784 GGTTGCTTTCATATTTGTGCTACTTAT 58.809 33.333 0.00 0.00 0.00 1.73
54 55 7.175816 TGGTTGCTTTCATATTTGTGCTACTTA 59.824 33.333 0.00 0.00 0.00 2.24
55 56 6.015519 TGGTTGCTTTCATATTTGTGCTACTT 60.016 34.615 0.00 0.00 0.00 2.24
56 57 5.476599 TGGTTGCTTTCATATTTGTGCTACT 59.523 36.000 0.00 0.00 0.00 2.57
57 58 5.572896 GTGGTTGCTTTCATATTTGTGCTAC 59.427 40.000 0.00 0.00 0.00 3.58
58 59 5.476599 AGTGGTTGCTTTCATATTTGTGCTA 59.523 36.000 0.00 0.00 0.00 3.49
59 60 4.281688 AGTGGTTGCTTTCATATTTGTGCT 59.718 37.500 0.00 0.00 0.00 4.40
60 61 4.386652 CAGTGGTTGCTTTCATATTTGTGC 59.613 41.667 0.00 0.00 0.00 4.57
61 62 5.630680 GTCAGTGGTTGCTTTCATATTTGTG 59.369 40.000 0.00 0.00 0.00 3.33
62 63 5.301551 TGTCAGTGGTTGCTTTCATATTTGT 59.698 36.000 0.00 0.00 0.00 2.83
63 64 5.771469 TGTCAGTGGTTGCTTTCATATTTG 58.229 37.500 0.00 0.00 0.00 2.32
64 65 5.536161 ACTGTCAGTGGTTGCTTTCATATTT 59.464 36.000 4.21 0.00 0.00 1.40
65 66 5.072741 ACTGTCAGTGGTTGCTTTCATATT 58.927 37.500 4.21 0.00 0.00 1.28
66 67 4.655963 ACTGTCAGTGGTTGCTTTCATAT 58.344 39.130 4.21 0.00 0.00 1.78
67 68 4.085357 ACTGTCAGTGGTTGCTTTCATA 57.915 40.909 4.21 0.00 0.00 2.15
68 69 2.936202 ACTGTCAGTGGTTGCTTTCAT 58.064 42.857 4.21 0.00 0.00 2.57
69 70 2.418368 ACTGTCAGTGGTTGCTTTCA 57.582 45.000 4.21 0.00 0.00 2.69
70 71 2.682856 TCAACTGTCAGTGGTTGCTTTC 59.317 45.455 6.18 0.00 41.53 2.62
71 72 2.722094 TCAACTGTCAGTGGTTGCTTT 58.278 42.857 6.18 0.00 41.53 3.51
72 73 2.418368 TCAACTGTCAGTGGTTGCTT 57.582 45.000 6.18 0.00 41.53 3.91
73 74 2.498167 GATCAACTGTCAGTGGTTGCT 58.502 47.619 6.18 0.00 41.53 3.91
74 75 1.537202 GGATCAACTGTCAGTGGTTGC 59.463 52.381 6.18 0.00 41.53 4.17
75 76 2.549754 GTGGATCAACTGTCAGTGGTTG 59.450 50.000 6.18 1.30 42.66 3.77
76 77 2.172505 TGTGGATCAACTGTCAGTGGTT 59.827 45.455 6.18 0.00 0.00 3.67
77 78 1.768275 TGTGGATCAACTGTCAGTGGT 59.232 47.619 6.18 0.00 0.00 4.16
78 79 2.146342 GTGTGGATCAACTGTCAGTGG 58.854 52.381 6.18 3.12 0.00 4.00
79 80 2.545526 GTGTGTGGATCAACTGTCAGTG 59.454 50.000 6.18 1.30 0.00 3.66
80 81 2.803133 CGTGTGTGGATCAACTGTCAGT 60.803 50.000 0.00 0.00 0.00 3.41
81 82 1.794701 CGTGTGTGGATCAACTGTCAG 59.205 52.381 1.02 0.00 0.00 3.51
82 83 1.540146 CCGTGTGTGGATCAACTGTCA 60.540 52.381 1.02 0.00 0.00 3.58
83 84 1.148310 CCGTGTGTGGATCAACTGTC 58.852 55.000 1.02 0.00 0.00 3.51
84 85 0.250295 CCCGTGTGTGGATCAACTGT 60.250 55.000 1.02 0.00 0.00 3.55
85 86 0.034756 TCCCGTGTGTGGATCAACTG 59.965 55.000 1.02 0.00 0.00 3.16
86 87 0.984230 ATCCCGTGTGTGGATCAACT 59.016 50.000 1.02 0.00 38.20 3.16
87 88 2.684001 TATCCCGTGTGTGGATCAAC 57.316 50.000 0.00 0.00 41.70 3.18
88 89 2.104111 GGATATCCCGTGTGTGGATCAA 59.896 50.000 11.02 0.00 41.70 2.57
89 90 1.691976 GGATATCCCGTGTGTGGATCA 59.308 52.381 11.02 0.00 41.70 2.92
90 91 1.971357 AGGATATCCCGTGTGTGGATC 59.029 52.381 18.56 0.00 41.70 3.36
91 92 2.103153 AGGATATCCCGTGTGTGGAT 57.897 50.000 18.56 0.00 44.71 3.41
92 93 2.759839 TAGGATATCCCGTGTGTGGA 57.240 50.000 18.56 0.00 40.87 4.02
93 94 2.612972 GCATAGGATATCCCGTGTGTGG 60.613 54.545 18.56 1.33 40.87 4.17
94 95 2.037121 TGCATAGGATATCCCGTGTGTG 59.963 50.000 18.56 9.32 40.87 3.82
95 96 2.037251 GTGCATAGGATATCCCGTGTGT 59.963 50.000 18.56 0.97 40.87 3.72
96 97 2.688507 GTGCATAGGATATCCCGTGTG 58.311 52.381 18.56 10.36 40.87 3.82
97 98 1.272490 CGTGCATAGGATATCCCGTGT 59.728 52.381 18.56 2.14 40.87 4.49
103 104 8.414003 TGGTTTATCTATCGTGCATAGGATATC 58.586 37.037 0.00 0.00 35.92 1.63
110 111 6.650427 AGAGTGGTTTATCTATCGTGCATA 57.350 37.500 0.00 0.00 0.00 3.14
111 112 5.537300 AGAGTGGTTTATCTATCGTGCAT 57.463 39.130 0.00 0.00 0.00 3.96
115 116 6.525578 TGACAAGAGTGGTTTATCTATCGT 57.474 37.500 0.00 0.00 0.00 3.73
116 117 7.036220 AGTTGACAAGAGTGGTTTATCTATCG 58.964 38.462 0.00 0.00 0.00 2.92
132 133 2.426738 TGCCACAAAGGAAGTTGACAAG 59.573 45.455 0.00 0.00 41.22 3.16
133 134 2.451490 TGCCACAAAGGAAGTTGACAA 58.549 42.857 0.00 0.00 41.22 3.18
134 135 2.136298 TGCCACAAAGGAAGTTGACA 57.864 45.000 0.00 0.00 41.22 3.58
135 136 2.029918 GGATGCCACAAAGGAAGTTGAC 60.030 50.000 0.00 0.00 41.22 3.18
138 139 2.242043 CAGGATGCCACAAAGGAAGTT 58.758 47.619 0.00 0.00 41.22 2.66
147 148 1.202710 ACACGTTTACAGGATGCCACA 60.203 47.619 0.00 0.00 42.53 4.17
158 159 2.674084 GCAGGCCGGACACGTTTAC 61.674 63.158 11.69 0.00 38.78 2.01
159 160 2.357760 GCAGGCCGGACACGTTTA 60.358 61.111 11.69 0.00 38.78 2.01
198 199 2.501223 GAACTGATGCGGACGGGTGA 62.501 60.000 0.00 0.00 0.00 4.02
211 212 1.065345 TGACCAAACCAACGGAACTGA 60.065 47.619 0.00 0.00 0.00 3.41
212 213 1.384525 TGACCAAACCAACGGAACTG 58.615 50.000 0.00 0.00 0.00 3.16
213 214 2.021457 CTTGACCAAACCAACGGAACT 58.979 47.619 0.00 0.00 0.00 3.01
218 219 2.032924 GTCCTTCTTGACCAAACCAACG 59.967 50.000 0.00 0.00 0.00 4.10
231 232 4.982241 TCTTGATCACTTGGTCCTTCTT 57.018 40.909 0.00 0.00 0.00 2.52
244 245 4.202080 GGCAGCAGCAAAATATCTTGATCA 60.202 41.667 2.65 0.00 44.61 2.92
254 255 1.066430 CAATGAGGGCAGCAGCAAAAT 60.066 47.619 2.65 0.00 44.61 1.82
258 259 0.540133 TTTCAATGAGGGCAGCAGCA 60.540 50.000 2.65 0.00 44.61 4.41
261 262 1.477553 GGATTTCAATGAGGGCAGCA 58.522 50.000 0.00 0.00 0.00 4.41
264 265 3.627237 GGTTAGGGATTTCAATGAGGGCA 60.627 47.826 0.00 0.00 0.00 5.36
288 289 1.325640 CCGTTCATCACTTGCTCGATG 59.674 52.381 0.00 0.00 40.34 3.84
294 295 0.652592 CGATCCCGTTCATCACTTGC 59.347 55.000 0.00 0.00 0.00 4.01
296 297 3.458189 GAATCGATCCCGTTCATCACTT 58.542 45.455 0.00 0.00 37.05 3.16
299 300 1.269569 CCGAATCGATCCCGTTCATCA 60.270 52.381 3.36 0.00 37.05 3.07
301 302 0.600255 GCCGAATCGATCCCGTTCAT 60.600 55.000 3.36 0.00 37.05 2.57
306 307 1.951130 CTGTGCCGAATCGATCCCG 60.951 63.158 3.36 5.76 37.07 5.14
318 319 2.736670 AAATCTACCCATCCTGTGCC 57.263 50.000 0.00 0.00 0.00 5.01
346 347 3.061429 GCGCTATAGCTATGCAGTTTAGC 59.939 47.826 21.98 13.42 41.93 3.09
367 368 3.918962 TGCTATAGCGTGCTAATAGCAGC 60.919 47.826 25.23 19.14 45.31 5.25
368 369 3.838120 TGCTATAGCGTGCTAATAGCAG 58.162 45.455 25.23 10.74 45.31 4.24
369 370 3.934457 TGCTATAGCGTGCTAATAGCA 57.066 42.857 25.23 25.23 46.95 3.49
379 380 6.986817 AGACAATTCTTTACATGCTATAGCGT 59.013 34.615 19.55 16.84 45.83 5.07
380 381 7.169813 TGAGACAATTCTTTACATGCTATAGCG 59.830 37.037 19.55 9.00 36.50 4.26
382 383 9.539825 AGTGAGACAATTCTTTACATGCTATAG 57.460 33.333 0.00 0.00 29.47 1.31
384 385 9.890629 TTAGTGAGACAATTCTTTACATGCTAT 57.109 29.630 0.00 0.00 29.47 2.97
385 386 9.719355 TTTAGTGAGACAATTCTTTACATGCTA 57.281 29.630 0.00 0.00 29.47 3.49
386 387 8.621532 TTTAGTGAGACAATTCTTTACATGCT 57.378 30.769 0.00 0.00 29.47 3.79
387 388 9.846248 AATTTAGTGAGACAATTCTTTACATGC 57.154 29.630 0.00 0.00 29.47 4.06
394 395 9.512588 ACTGATCAATTTAGTGAGACAATTCTT 57.487 29.630 0.00 0.00 29.47 2.52
395 396 8.944029 CACTGATCAATTTAGTGAGACAATTCT 58.056 33.333 6.24 0.00 43.35 2.40
396 397 7.695618 GCACTGATCAATTTAGTGAGACAATTC 59.304 37.037 14.36 0.00 43.35 2.17
397 398 7.533426 GCACTGATCAATTTAGTGAGACAATT 58.467 34.615 14.36 0.00 43.35 2.32
398 399 6.183360 CGCACTGATCAATTTAGTGAGACAAT 60.183 38.462 14.36 0.00 42.42 2.71
399 400 5.120674 CGCACTGATCAATTTAGTGAGACAA 59.879 40.000 14.36 0.00 42.42 3.18
400 401 4.627035 CGCACTGATCAATTTAGTGAGACA 59.373 41.667 14.36 0.00 42.42 3.41
401 402 4.493220 GCGCACTGATCAATTTAGTGAGAC 60.493 45.833 16.38 7.02 42.42 3.36
402 403 3.618594 GCGCACTGATCAATTTAGTGAGA 59.381 43.478 16.38 0.00 42.42 3.27
403 404 3.620374 AGCGCACTGATCAATTTAGTGAG 59.380 43.478 11.47 12.21 43.35 3.51
404 405 3.599343 AGCGCACTGATCAATTTAGTGA 58.401 40.909 11.47 0.00 43.35 3.41
422 423 4.910746 ATATGCTATTAGCGAAACAGCG 57.089 40.909 10.94 0.00 46.26 5.18
423 424 7.914537 AAAAATATGCTATTAGCGAAACAGC 57.085 32.000 10.94 8.86 46.26 4.40
424 425 9.599322 CCTAAAAATATGCTATTAGCGAAACAG 57.401 33.333 10.94 1.54 46.26 3.16
425 426 8.564574 CCCTAAAAATATGCTATTAGCGAAACA 58.435 33.333 10.94 0.00 46.26 2.83
426 427 8.780249 TCCCTAAAAATATGCTATTAGCGAAAC 58.220 33.333 10.94 0.00 46.26 2.78
427 428 8.911918 TCCCTAAAAATATGCTATTAGCGAAA 57.088 30.769 10.94 0.00 46.26 3.46
428 429 8.946085 CATCCCTAAAAATATGCTATTAGCGAA 58.054 33.333 10.94 2.06 46.26 4.70
429 430 8.318412 TCATCCCTAAAAATATGCTATTAGCGA 58.682 33.333 10.94 2.18 46.26 4.93
430 431 8.391106 GTCATCCCTAAAAATATGCTATTAGCG 58.609 37.037 10.94 0.00 46.26 4.26
431 432 8.391106 CGTCATCCCTAAAAATATGCTATTAGC 58.609 37.037 8.80 8.80 42.82 3.09
432 433 8.391106 GCGTCATCCCTAAAAATATGCTATTAG 58.609 37.037 0.00 0.00 0.00 1.73
433 434 8.100791 AGCGTCATCCCTAAAAATATGCTATTA 58.899 33.333 0.00 0.00 0.00 0.98
434 435 6.942576 AGCGTCATCCCTAAAAATATGCTATT 59.057 34.615 0.00 0.00 0.00 1.73
435 436 6.476378 AGCGTCATCCCTAAAAATATGCTAT 58.524 36.000 0.00 0.00 0.00 2.97
436 437 5.865085 AGCGTCATCCCTAAAAATATGCTA 58.135 37.500 0.00 0.00 0.00 3.49
437 438 4.718961 AGCGTCATCCCTAAAAATATGCT 58.281 39.130 0.00 0.00 0.00 3.79
438 439 6.743575 ATAGCGTCATCCCTAAAAATATGC 57.256 37.500 0.00 0.00 0.00 3.14
439 440 9.398170 CAAAATAGCGTCATCCCTAAAAATATG 57.602 33.333 0.00 0.00 0.00 1.78
440 441 9.131791 ACAAAATAGCGTCATCCCTAAAAATAT 57.868 29.630 0.00 0.00 0.00 1.28
441 442 8.514330 ACAAAATAGCGTCATCCCTAAAAATA 57.486 30.769 0.00 0.00 0.00 1.40
442 443 7.404671 ACAAAATAGCGTCATCCCTAAAAAT 57.595 32.000 0.00 0.00 0.00 1.82
443 444 6.827586 ACAAAATAGCGTCATCCCTAAAAA 57.172 33.333 0.00 0.00 0.00 1.94
444 445 9.268268 CTATACAAAATAGCGTCATCCCTAAAA 57.732 33.333 0.00 0.00 0.00 1.52
445 446 7.386848 GCTATACAAAATAGCGTCATCCCTAAA 59.613 37.037 1.56 0.00 37.79 1.85
446 447 6.872020 GCTATACAAAATAGCGTCATCCCTAA 59.128 38.462 1.56 0.00 37.79 2.69
447 448 6.395629 GCTATACAAAATAGCGTCATCCCTA 58.604 40.000 1.56 0.00 37.79 3.53
448 449 5.238583 GCTATACAAAATAGCGTCATCCCT 58.761 41.667 1.56 0.00 37.79 4.20
449 450 5.532025 GCTATACAAAATAGCGTCATCCC 57.468 43.478 1.56 0.00 37.79 3.85
457 458 4.842139 ATAGCGCGCTATACAAAATAGC 57.158 40.909 43.42 7.10 42.53 2.97
479 480 7.581213 TGATGAGGTTTAGCAAAGAGAAAAA 57.419 32.000 0.00 0.00 0.00 1.94
480 481 7.309377 CCATGATGAGGTTTAGCAAAGAGAAAA 60.309 37.037 0.00 0.00 0.00 2.29
481 482 6.151648 CCATGATGAGGTTTAGCAAAGAGAAA 59.848 38.462 0.00 0.00 0.00 2.52
482 483 5.649395 CCATGATGAGGTTTAGCAAAGAGAA 59.351 40.000 0.00 0.00 0.00 2.87
483 484 5.188434 CCATGATGAGGTTTAGCAAAGAGA 58.812 41.667 0.00 0.00 0.00 3.10
484 485 4.337555 CCCATGATGAGGTTTAGCAAAGAG 59.662 45.833 0.00 0.00 0.00 2.85
485 486 4.263905 ACCCATGATGAGGTTTAGCAAAGA 60.264 41.667 0.00 0.00 29.94 2.52
486 487 4.019174 ACCCATGATGAGGTTTAGCAAAG 58.981 43.478 0.00 0.00 29.94 2.77
487 488 3.763360 CACCCATGATGAGGTTTAGCAAA 59.237 43.478 0.00 0.00 32.72 3.68
488 489 3.245229 ACACCCATGATGAGGTTTAGCAA 60.245 43.478 0.00 0.00 32.72 3.91
489 490 2.308570 ACACCCATGATGAGGTTTAGCA 59.691 45.455 0.00 0.00 32.72 3.49
490 491 2.684881 CACACCCATGATGAGGTTTAGC 59.315 50.000 0.00 0.00 32.72 3.09
491 492 4.080919 TCTCACACCCATGATGAGGTTTAG 60.081 45.833 13.07 0.00 40.28 1.85
492 493 3.843619 TCTCACACCCATGATGAGGTTTA 59.156 43.478 13.07 0.00 40.28 2.01
493 494 2.644299 TCTCACACCCATGATGAGGTTT 59.356 45.455 13.07 0.00 40.28 3.27
494 495 2.026822 GTCTCACACCCATGATGAGGTT 60.027 50.000 13.07 0.00 40.28 3.50
495 496 1.556911 GTCTCACACCCATGATGAGGT 59.443 52.381 13.07 0.00 40.28 3.85
496 497 1.472201 CGTCTCACACCCATGATGAGG 60.472 57.143 13.07 0.00 40.28 3.86
497 498 1.472201 CCGTCTCACACCCATGATGAG 60.472 57.143 0.00 2.15 41.06 2.90
498 499 0.536724 CCGTCTCACACCCATGATGA 59.463 55.000 0.00 0.00 0.00 2.92
499 500 0.462581 CCCGTCTCACACCCATGATG 60.463 60.000 0.00 0.00 0.00 3.07
500 501 0.909610 ACCCGTCTCACACCCATGAT 60.910 55.000 0.00 0.00 0.00 2.45
508 509 1.068417 CAACCGAACCCGTCTCACA 59.932 57.895 0.00 0.00 0.00 3.58
509 510 2.315386 GCAACCGAACCCGTCTCAC 61.315 63.158 0.00 0.00 0.00 3.51
529 530 2.120909 CATTGACATCACCCGCCCC 61.121 63.158 0.00 0.00 0.00 5.80
536 537 5.812642 ACCGAAGTAGAATCATTGACATCAC 59.187 40.000 0.00 0.00 0.00 3.06
559 560 8.027189 AGTTTAAAACAGACTTCACTCCAAAAC 58.973 33.333 0.00 0.00 0.00 2.43
564 565 7.758495 TCAAAGTTTAAAACAGACTTCACTCC 58.242 34.615 0.00 0.00 32.79 3.85
565 566 7.910683 CCTCAAAGTTTAAAACAGACTTCACTC 59.089 37.037 0.00 0.00 32.79 3.51
566 567 7.393515 ACCTCAAAGTTTAAAACAGACTTCACT 59.606 33.333 0.00 0.00 32.79 3.41
569 570 8.027189 ACAACCTCAAAGTTTAAAACAGACTTC 58.973 33.333 0.00 0.00 32.79 3.01
570 571 7.892609 ACAACCTCAAAGTTTAAAACAGACTT 58.107 30.769 0.00 0.00 35.27 3.01
571 572 7.462571 ACAACCTCAAAGTTTAAAACAGACT 57.537 32.000 0.00 0.00 0.00 3.24
572 573 8.671028 TCTACAACCTCAAAGTTTAAAACAGAC 58.329 33.333 0.00 0.00 0.00 3.51
573 574 8.795842 TCTACAACCTCAAAGTTTAAAACAGA 57.204 30.769 0.00 0.00 0.00 3.41
574 575 8.674607 ACTCTACAACCTCAAAGTTTAAAACAG 58.325 33.333 0.00 0.00 0.00 3.16
575 576 8.455682 CACTCTACAACCTCAAAGTTTAAAACA 58.544 33.333 0.00 0.00 0.00 2.83
576 577 7.431376 GCACTCTACAACCTCAAAGTTTAAAAC 59.569 37.037 0.00 0.00 0.00 2.43
577 578 7.477494 GCACTCTACAACCTCAAAGTTTAAAA 58.523 34.615 0.00 0.00 0.00 1.52
578 579 6.238266 CGCACTCTACAACCTCAAAGTTTAAA 60.238 38.462 0.00 0.00 0.00 1.52
579 580 5.235616 CGCACTCTACAACCTCAAAGTTTAA 59.764 40.000 0.00 0.00 0.00 1.52
580 581 4.748102 CGCACTCTACAACCTCAAAGTTTA 59.252 41.667 0.00 0.00 0.00 2.01
581 582 3.560068 CGCACTCTACAACCTCAAAGTTT 59.440 43.478 0.00 0.00 0.00 2.66
582 583 3.131396 CGCACTCTACAACCTCAAAGTT 58.869 45.455 0.00 0.00 0.00 2.66
583 584 2.548067 CCGCACTCTACAACCTCAAAGT 60.548 50.000 0.00 0.00 0.00 2.66
584 585 2.069273 CCGCACTCTACAACCTCAAAG 58.931 52.381 0.00 0.00 0.00 2.77
585 586 1.876416 GCCGCACTCTACAACCTCAAA 60.876 52.381 0.00 0.00 0.00 2.69
586 587 0.320421 GCCGCACTCTACAACCTCAA 60.320 55.000 0.00 0.00 0.00 3.02
587 588 1.292223 GCCGCACTCTACAACCTCA 59.708 57.895 0.00 0.00 0.00 3.86
588 589 1.805945 CGCCGCACTCTACAACCTC 60.806 63.158 0.00 0.00 0.00 3.85
589 590 2.261671 CGCCGCACTCTACAACCT 59.738 61.111 0.00 0.00 0.00 3.50
590 591 3.488090 GCGCCGCACTCTACAACC 61.488 66.667 3.15 0.00 0.00 3.77
591 592 1.837538 TTTGCGCCGCACTCTACAAC 61.838 55.000 13.21 0.00 38.71 3.32
592 593 0.953471 ATTTGCGCCGCACTCTACAA 60.953 50.000 13.21 1.83 38.71 2.41
593 594 0.108567 TATTTGCGCCGCACTCTACA 60.109 50.000 13.21 0.00 38.71 2.74
594 595 1.003851 TTATTTGCGCCGCACTCTAC 58.996 50.000 13.21 0.00 38.71 2.59
595 596 1.395608 GTTTATTTGCGCCGCACTCTA 59.604 47.619 13.21 0.08 38.71 2.43
596 597 0.168128 GTTTATTTGCGCCGCACTCT 59.832 50.000 13.21 1.23 38.71 3.24
597 598 0.796870 GGTTTATTTGCGCCGCACTC 60.797 55.000 13.21 0.00 38.71 3.51
598 599 1.211709 GGTTTATTTGCGCCGCACT 59.788 52.632 13.21 4.68 38.71 4.40
599 600 0.388006 AAGGTTTATTTGCGCCGCAC 60.388 50.000 13.21 0.00 38.71 5.34
600 601 0.315568 AAAGGTTTATTTGCGCCGCA 59.684 45.000 8.16 8.16 36.47 5.69
601 602 0.713329 CAAAGGTTTATTTGCGCCGC 59.287 50.000 4.18 0.00 33.71 6.53
602 603 2.339728 TCAAAGGTTTATTTGCGCCG 57.660 45.000 4.18 0.00 39.51 6.46
603 604 5.605564 AAAATCAAAGGTTTATTTGCGCC 57.394 34.783 4.18 0.00 39.51 6.53
604 605 8.995419 TTTAAAAATCAAAGGTTTATTTGCGC 57.005 26.923 0.00 0.00 39.51 6.09
609 610 8.652463 CGCGGATTTAAAAATCAAAGGTTTATT 58.348 29.630 15.36 0.00 45.10 1.40
610 611 7.815549 ACGCGGATTTAAAAATCAAAGGTTTAT 59.184 29.630 12.47 0.00 45.10 1.40
611 612 7.115095 CACGCGGATTTAAAAATCAAAGGTTTA 59.885 33.333 12.47 0.00 45.10 2.01
612 613 5.986741 ACGCGGATTTAAAAATCAAAGGTTT 59.013 32.000 12.47 0.00 45.10 3.27
613 614 5.404066 CACGCGGATTTAAAAATCAAAGGTT 59.596 36.000 12.47 0.00 45.10 3.50
614 615 4.920927 CACGCGGATTTAAAAATCAAAGGT 59.079 37.500 12.47 6.39 45.10 3.50
615 616 4.201580 GCACGCGGATTTAAAAATCAAAGG 60.202 41.667 12.47 5.89 45.10 3.11
616 617 4.488573 CGCACGCGGATTTAAAAATCAAAG 60.489 41.667 12.47 8.85 45.10 2.77
617 618 3.362237 CGCACGCGGATTTAAAAATCAAA 59.638 39.130 12.47 0.00 45.10 2.69
618 619 2.911723 CGCACGCGGATTTAAAAATCAA 59.088 40.909 12.47 0.00 45.10 2.57
619 620 2.095668 ACGCACGCGGATTTAAAAATCA 60.096 40.909 16.70 0.00 45.10 2.57
620 621 2.275253 CACGCACGCGGATTTAAAAATC 59.725 45.455 16.70 6.85 44.69 2.17
621 622 2.095668 TCACGCACGCGGATTTAAAAAT 60.096 40.909 16.70 0.00 44.69 1.82
622 623 1.263484 TCACGCACGCGGATTTAAAAA 59.737 42.857 16.70 0.00 44.69 1.94
623 624 0.866427 TCACGCACGCGGATTTAAAA 59.134 45.000 16.70 0.00 44.69 1.52
624 625 0.164217 GTCACGCACGCGGATTTAAA 59.836 50.000 16.70 0.00 44.69 1.52
625 626 0.944788 TGTCACGCACGCGGATTTAA 60.945 50.000 16.70 0.00 44.69 1.52
626 627 1.373121 TGTCACGCACGCGGATTTA 60.373 52.632 16.70 0.00 44.69 1.40
627 628 2.663520 TGTCACGCACGCGGATTT 60.664 55.556 16.70 0.00 44.69 2.17
628 629 3.411351 GTGTCACGCACGCGGATT 61.411 61.111 16.70 0.00 44.69 3.01
645 646 2.921912 GCATTGACATGTTGGGTTCACG 60.922 50.000 0.00 0.00 32.28 4.35
670 671 4.822026 TCTTAAGTTCTTGTAGCTCTGCC 58.178 43.478 1.63 0.00 0.00 4.85
671 672 5.696724 TGTTCTTAAGTTCTTGTAGCTCTGC 59.303 40.000 1.63 0.00 0.00 4.26
672 673 7.715265 TTGTTCTTAAGTTCTTGTAGCTCTG 57.285 36.000 1.63 0.00 0.00 3.35
673 674 8.732746 TTTTGTTCTTAAGTTCTTGTAGCTCT 57.267 30.769 1.63 0.00 0.00 4.09
674 675 9.387123 CATTTTGTTCTTAAGTTCTTGTAGCTC 57.613 33.333 1.63 0.00 0.00 4.09
675 676 8.903820 ACATTTTGTTCTTAAGTTCTTGTAGCT 58.096 29.630 1.63 0.00 0.00 3.32
693 694 3.788227 TCTAGGACTGCCACATTTTGT 57.212 42.857 0.00 0.00 36.29 2.83
706 707 9.943163 GCATAGAAAAATCAAATCTTCTAGGAC 57.057 33.333 6.55 0.00 35.31 3.85
750 752 3.571401 GCCCAAAAGCATGCATATACTCT 59.429 43.478 21.98 0.00 0.00 3.24
781 783 7.303261 TCTATATACTTTATCACGGTCTTGCG 58.697 38.462 0.00 0.00 0.00 4.85
786 788 9.367444 CCCAAATCTATATACTTTATCACGGTC 57.633 37.037 0.00 0.00 0.00 4.79
858 869 1.154205 GCCGTGATCGATCCACCTTG 61.154 60.000 22.31 11.03 39.71 3.61
953 964 2.223066 CGTTTGTTGTGGACTGCGTTTA 60.223 45.455 0.00 0.00 0.00 2.01
955 966 0.098025 CGTTTGTTGTGGACTGCGTT 59.902 50.000 0.00 0.00 0.00 4.84
961 972 0.385473 CGGATGCGTTTGTTGTGGAC 60.385 55.000 0.00 0.00 0.00 4.02
962 973 1.945522 CGGATGCGTTTGTTGTGGA 59.054 52.632 0.00 0.00 0.00 4.02
964 975 3.827524 GCGGATGCGTTTGTTGTG 58.172 55.556 8.84 0.00 0.00 3.33
980 991 0.399833 GGGAAGGAGATGGATGGAGC 59.600 60.000 0.00 0.00 0.00 4.70
1022 1036 3.781770 GATGCGGACGGAGCTGAGG 62.782 68.421 0.00 0.00 35.28 3.86
1077 1097 2.856032 CCGCTGCTTGTCACTTCG 59.144 61.111 0.00 0.00 0.00 3.79
1093 1133 3.305177 CTTGCCCATGGTTGCTGCC 62.305 63.158 11.73 0.00 0.00 4.85
1100 1140 1.377725 CGAGCTTCTTGCCCATGGT 60.378 57.895 11.73 0.00 44.23 3.55
1204 1247 2.029964 GAGGACACGGCGGAAACA 59.970 61.111 13.24 0.00 0.00 2.83
1789 1871 1.081840 GCCGCTCTGCTTGTTGTTC 60.082 57.895 0.00 0.00 0.00 3.18
1871 1967 2.874694 CGAATCGCTGATGCCACCG 61.875 63.158 0.00 0.00 35.36 4.94
1913 2013 5.883673 ACAAACTCAAAACAGCCTAAGTACA 59.116 36.000 0.00 0.00 0.00 2.90
1914 2014 6.373186 ACAAACTCAAAACAGCCTAAGTAC 57.627 37.500 0.00 0.00 0.00 2.73
1915 2015 6.600032 TCAACAAACTCAAAACAGCCTAAGTA 59.400 34.615 0.00 0.00 0.00 2.24
1916 2016 5.417580 TCAACAAACTCAAAACAGCCTAAGT 59.582 36.000 0.00 0.00 0.00 2.24
1918 2018 5.650266 TCTCAACAAACTCAAAACAGCCTAA 59.350 36.000 0.00 0.00 0.00 2.69
1927 2027 4.398988 ACACATGCTCTCAACAAACTCAAA 59.601 37.500 0.00 0.00 0.00 2.69
1931 2031 3.282021 ACACACATGCTCTCAACAAACT 58.718 40.909 0.00 0.00 0.00 2.66
1948 2048 6.401394 ACGTATACTACAGAGTACAGACACA 58.599 40.000 0.56 0.00 41.01 3.72
1952 2056 8.470002 TCAAGTACGTATACTACAGAGTACAGA 58.530 37.037 14.77 10.74 41.00 3.41
1970 2074 8.827599 CAACGTCTCAAAATTTAATCAAGTACG 58.172 33.333 0.00 0.00 0.00 3.67
1971 2075 9.872757 TCAACGTCTCAAAATTTAATCAAGTAC 57.127 29.630 0.00 0.00 0.00 2.73
1980 2084 6.316640 TCCAACAGTCAACGTCTCAAAATTTA 59.683 34.615 0.00 0.00 0.00 1.40
1986 2090 2.971660 TCCAACAGTCAACGTCTCAA 57.028 45.000 0.00 0.00 0.00 3.02
1988 2092 6.147164 TCAAATAATCCAACAGTCAACGTCTC 59.853 38.462 0.00 0.00 0.00 3.36
1989 2093 5.995282 TCAAATAATCCAACAGTCAACGTCT 59.005 36.000 0.00 0.00 0.00 4.18
1992 2099 6.841119 TCATCAAATAATCCAACAGTCAACG 58.159 36.000 0.00 0.00 0.00 4.10
1998 2105 5.174398 GCGCAATCATCAAATAATCCAACAG 59.826 40.000 0.30 0.00 0.00 3.16
1999 2106 5.042593 GCGCAATCATCAAATAATCCAACA 58.957 37.500 0.30 0.00 0.00 3.33
2004 2111 5.404366 AGCAATGCGCAATCATCAAATAATC 59.596 36.000 17.11 0.00 46.13 1.75
2011 2118 2.032426 CACTAGCAATGCGCAATCATCA 59.968 45.455 17.11 0.00 46.13 3.07
2021 2128 0.917259 CTCGACGTCACTAGCAATGC 59.083 55.000 17.16 0.00 0.00 3.56
2022 2129 0.917259 GCTCGACGTCACTAGCAATG 59.083 55.000 22.58 2.94 35.05 2.82
2023 2130 0.811915 AGCTCGACGTCACTAGCAAT 59.188 50.000 26.69 11.81 37.44 3.56
2024 2131 0.596577 AAGCTCGACGTCACTAGCAA 59.403 50.000 26.69 1.87 37.44 3.91
2025 2132 0.596577 AAAGCTCGACGTCACTAGCA 59.403 50.000 26.69 1.90 37.44 3.49
2026 2133 1.261097 GAAAGCTCGACGTCACTAGC 58.739 55.000 20.88 20.88 35.16 3.42
2038 2145 3.254060 TGCTATTCACTCACGAAAGCTC 58.746 45.455 0.00 0.00 33.73 4.09
2039 2146 3.056536 TCTGCTATTCACTCACGAAAGCT 60.057 43.478 0.00 0.00 33.73 3.74
2040 2147 3.254060 TCTGCTATTCACTCACGAAAGC 58.746 45.455 0.00 0.00 33.45 3.51
2041 2148 5.845985 TTTCTGCTATTCACTCACGAAAG 57.154 39.130 0.00 0.00 0.00 2.62
2042 2149 5.758296 AGTTTTCTGCTATTCACTCACGAAA 59.242 36.000 0.00 0.00 0.00 3.46
2043 2150 5.297547 AGTTTTCTGCTATTCACTCACGAA 58.702 37.500 0.00 0.00 0.00 3.85
2044 2151 4.883083 AGTTTTCTGCTATTCACTCACGA 58.117 39.130 0.00 0.00 0.00 4.35
2045 2152 5.062308 GGTAGTTTTCTGCTATTCACTCACG 59.938 44.000 0.00 0.00 33.10 4.35
2046 2153 5.932303 TGGTAGTTTTCTGCTATTCACTCAC 59.068 40.000 0.00 0.00 33.10 3.51
2047 2154 5.932303 GTGGTAGTTTTCTGCTATTCACTCA 59.068 40.000 0.00 0.00 33.10 3.41
2048 2155 5.932303 TGTGGTAGTTTTCTGCTATTCACTC 59.068 40.000 0.00 0.00 32.29 3.51
2049 2156 5.865085 TGTGGTAGTTTTCTGCTATTCACT 58.135 37.500 0.00 0.00 32.29 3.41
2050 2157 6.743575 ATGTGGTAGTTTTCTGCTATTCAC 57.256 37.500 0.00 0.00 33.10 3.18
2051 2158 7.065803 GCTAATGTGGTAGTTTTCTGCTATTCA 59.934 37.037 0.00 0.00 33.10 2.57
2052 2159 7.410485 GCTAATGTGGTAGTTTTCTGCTATTC 58.590 38.462 0.00 0.00 33.10 1.75
2053 2160 6.037172 CGCTAATGTGGTAGTTTTCTGCTATT 59.963 38.462 0.00 0.00 33.10 1.73
2054 2161 5.523916 CGCTAATGTGGTAGTTTTCTGCTAT 59.476 40.000 0.00 0.00 33.10 2.97
2055 2162 4.868171 CGCTAATGTGGTAGTTTTCTGCTA 59.132 41.667 0.00 0.00 33.10 3.49
2056 2163 3.684788 CGCTAATGTGGTAGTTTTCTGCT 59.315 43.478 0.00 0.00 33.10 4.24
2057 2164 3.727970 GCGCTAATGTGGTAGTTTTCTGC 60.728 47.826 0.00 0.00 0.00 4.26
2058 2165 3.435327 TGCGCTAATGTGGTAGTTTTCTG 59.565 43.478 9.73 0.00 0.00 3.02
2059 2166 3.670625 TGCGCTAATGTGGTAGTTTTCT 58.329 40.909 9.73 0.00 0.00 2.52
2060 2167 4.616181 ATGCGCTAATGTGGTAGTTTTC 57.384 40.909 9.73 0.00 0.00 2.29
2061 2168 4.574828 CCTATGCGCTAATGTGGTAGTTTT 59.425 41.667 9.73 0.00 0.00 2.43
2062 2169 4.127171 CCTATGCGCTAATGTGGTAGTTT 58.873 43.478 9.73 0.00 0.00 2.66
2063 2170 3.134081 ACCTATGCGCTAATGTGGTAGTT 59.866 43.478 9.73 0.00 0.00 2.24
2064 2171 2.698797 ACCTATGCGCTAATGTGGTAGT 59.301 45.455 9.73 0.00 0.00 2.73
2065 2172 3.386768 ACCTATGCGCTAATGTGGTAG 57.613 47.619 9.73 0.00 0.00 3.18
2066 2173 3.830744 AACCTATGCGCTAATGTGGTA 57.169 42.857 9.73 0.00 0.00 3.25
2067 2174 2.682856 CAAACCTATGCGCTAATGTGGT 59.317 45.455 9.73 5.62 0.00 4.16
2068 2175 2.541588 GCAAACCTATGCGCTAATGTGG 60.542 50.000 9.73 4.95 36.45 4.17
2069 2176 2.719798 GCAAACCTATGCGCTAATGTG 58.280 47.619 9.73 0.00 36.45 3.21
2078 2185 0.885196 TGTTTCCCGCAAACCTATGC 59.115 50.000 5.93 0.00 43.52 3.14
2079 2186 2.159382 AGTGTTTCCCGCAAACCTATG 58.841 47.619 5.93 0.00 43.52 2.23
2080 2187 2.039879 AGAGTGTTTCCCGCAAACCTAT 59.960 45.455 5.93 0.00 43.52 2.57
2081 2188 1.418637 AGAGTGTTTCCCGCAAACCTA 59.581 47.619 5.93 0.00 43.52 3.08
2082 2189 0.182775 AGAGTGTTTCCCGCAAACCT 59.817 50.000 5.93 3.51 43.52 3.50
2083 2190 1.029681 AAGAGTGTTTCCCGCAAACC 58.970 50.000 5.93 0.00 43.52 3.27
2084 2191 2.863401 AAAGAGTGTTTCCCGCAAAC 57.137 45.000 2.14 2.14 44.31 2.93
2085 2192 3.242804 CGTAAAAGAGTGTTTCCCGCAAA 60.243 43.478 0.00 0.00 0.00 3.68
2086 2193 2.288458 CGTAAAAGAGTGTTTCCCGCAA 59.712 45.455 0.00 0.00 0.00 4.85
2087 2194 1.868498 CGTAAAAGAGTGTTTCCCGCA 59.132 47.619 0.00 0.00 0.00 5.69
2088 2195 2.137523 TCGTAAAAGAGTGTTTCCCGC 58.862 47.619 0.00 0.00 0.00 6.13
2089 2196 5.352643 AATTCGTAAAAGAGTGTTTCCCG 57.647 39.130 0.00 0.00 0.00 5.14
2090 2197 6.731164 TCAAATTCGTAAAAGAGTGTTTCCC 58.269 36.000 0.00 0.00 0.00 3.97
2091 2198 6.359883 GCTCAAATTCGTAAAAGAGTGTTTCC 59.640 38.462 0.00 0.00 0.00 3.13
2092 2199 6.359883 GGCTCAAATTCGTAAAAGAGTGTTTC 59.640 38.462 0.00 0.00 0.00 2.78
2093 2200 6.183360 TGGCTCAAATTCGTAAAAGAGTGTTT 60.183 34.615 0.00 0.00 0.00 2.83
2094 2201 5.298276 TGGCTCAAATTCGTAAAAGAGTGTT 59.702 36.000 0.00 0.00 0.00 3.32
2095 2202 4.819630 TGGCTCAAATTCGTAAAAGAGTGT 59.180 37.500 0.00 0.00 0.00 3.55
2096 2203 5.179368 TCTGGCTCAAATTCGTAAAAGAGTG 59.821 40.000 0.00 0.00 0.00 3.51
2097 2204 5.305585 TCTGGCTCAAATTCGTAAAAGAGT 58.694 37.500 0.00 0.00 0.00 3.24
2098 2205 5.862924 TCTGGCTCAAATTCGTAAAAGAG 57.137 39.130 0.00 0.00 0.00 2.85
2099 2206 6.435428 GTTTCTGGCTCAAATTCGTAAAAGA 58.565 36.000 0.00 0.00 0.00 2.52
2100 2207 5.629435 GGTTTCTGGCTCAAATTCGTAAAAG 59.371 40.000 0.00 0.00 0.00 2.27
2101 2208 5.067936 TGGTTTCTGGCTCAAATTCGTAAAA 59.932 36.000 0.00 0.00 0.00 1.52
2102 2209 4.580995 TGGTTTCTGGCTCAAATTCGTAAA 59.419 37.500 0.00 0.00 0.00 2.01
2103 2210 4.023536 GTGGTTTCTGGCTCAAATTCGTAA 60.024 41.667 0.00 0.00 0.00 3.18
2104 2211 3.500680 GTGGTTTCTGGCTCAAATTCGTA 59.499 43.478 0.00 0.00 0.00 3.43
2105 2212 2.293399 GTGGTTTCTGGCTCAAATTCGT 59.707 45.455 0.00 0.00 0.00 3.85
2106 2213 2.554032 AGTGGTTTCTGGCTCAAATTCG 59.446 45.455 0.00 0.00 0.00 3.34
2107 2214 3.569701 TCAGTGGTTTCTGGCTCAAATTC 59.430 43.478 0.00 0.00 36.25 2.17
2108 2215 3.565307 TCAGTGGTTTCTGGCTCAAATT 58.435 40.909 0.00 0.00 36.25 1.82
2109 2216 3.228188 TCAGTGGTTTCTGGCTCAAAT 57.772 42.857 0.00 0.00 36.25 2.32
2110 2217 2.727123 TCAGTGGTTTCTGGCTCAAA 57.273 45.000 0.00 0.00 36.25 2.69
2111 2218 2.957402 ATCAGTGGTTTCTGGCTCAA 57.043 45.000 0.00 0.00 36.25 3.02
2112 2219 2.957402 AATCAGTGGTTTCTGGCTCA 57.043 45.000 0.00 0.00 36.25 4.26
2113 2220 4.550422 GAAAAATCAGTGGTTTCTGGCTC 58.450 43.478 0.89 0.00 36.25 4.70
2114 2221 3.004734 CGAAAAATCAGTGGTTTCTGGCT 59.995 43.478 0.89 0.00 36.25 4.75
2115 2222 3.004315 TCGAAAAATCAGTGGTTTCTGGC 59.996 43.478 0.89 0.00 36.25 4.85
2116 2223 4.275936 AGTCGAAAAATCAGTGGTTTCTGG 59.724 41.667 0.89 0.00 36.25 3.86
2117 2224 5.424121 AGTCGAAAAATCAGTGGTTTCTG 57.576 39.130 0.89 0.00 36.85 3.02
2118 2225 7.661847 AGATTAGTCGAAAAATCAGTGGTTTCT 59.338 33.333 18.24 0.00 35.07 2.52
2119 2226 7.807680 AGATTAGTCGAAAAATCAGTGGTTTC 58.192 34.615 18.24 3.70 35.07 2.78
2120 2227 7.745620 AGATTAGTCGAAAAATCAGTGGTTT 57.254 32.000 18.24 0.00 35.07 3.27
2121 2228 7.745620 AAGATTAGTCGAAAAATCAGTGGTT 57.254 32.000 18.24 5.62 35.07 3.67
2122 2229 7.745620 AAAGATTAGTCGAAAAATCAGTGGT 57.254 32.000 18.24 0.84 35.07 4.16
2123 2230 7.061094 GCAAAAGATTAGTCGAAAAATCAGTGG 59.939 37.037 18.24 8.09 35.07 4.00
2124 2231 7.591057 TGCAAAAGATTAGTCGAAAAATCAGTG 59.409 33.333 18.24 14.13 35.07 3.66
2125 2232 7.648142 TGCAAAAGATTAGTCGAAAAATCAGT 58.352 30.769 18.24 7.27 35.07 3.41
2126 2233 8.506140 TTGCAAAAGATTAGTCGAAAAATCAG 57.494 30.769 18.24 9.43 35.07 2.90
2127 2234 8.864069 TTTGCAAAAGATTAGTCGAAAAATCA 57.136 26.923 10.02 0.80 35.07 2.57
2151 2258 4.202010 CCAAACAGACCGATCAGTGTTTTT 60.202 41.667 8.30 0.00 40.32 1.94
2152 2259 3.315191 CCAAACAGACCGATCAGTGTTTT 59.685 43.478 8.30 0.00 40.32 2.43
2153 2260 2.878406 CCAAACAGACCGATCAGTGTTT 59.122 45.455 6.09 6.09 42.45 2.83
2154 2261 2.104111 TCCAAACAGACCGATCAGTGTT 59.896 45.455 0.00 0.00 34.60 3.32
2155 2262 1.691976 TCCAAACAGACCGATCAGTGT 59.308 47.619 0.00 0.00 0.00 3.55
2156 2263 2.069273 GTCCAAACAGACCGATCAGTG 58.931 52.381 0.00 0.00 0.00 3.66
2157 2264 1.691976 TGTCCAAACAGACCGATCAGT 59.308 47.619 0.00 0.00 35.83 3.41
2158 2265 2.455674 TGTCCAAACAGACCGATCAG 57.544 50.000 0.00 0.00 35.83 2.90
2159 2266 2.920724 TTGTCCAAACAGACCGATCA 57.079 45.000 0.00 0.00 36.57 2.92
2160 2267 4.766404 AAATTGTCCAAACAGACCGATC 57.234 40.909 0.00 0.00 36.57 3.69
2161 2268 5.048294 GGTTAAATTGTCCAAACAGACCGAT 60.048 40.000 0.00 0.00 36.57 4.18
2162 2269 4.276431 GGTTAAATTGTCCAAACAGACCGA 59.724 41.667 0.00 0.00 36.57 4.69
2163 2270 4.036971 TGGTTAAATTGTCCAAACAGACCG 59.963 41.667 0.00 0.00 36.57 4.79
2164 2271 5.523438 TGGTTAAATTGTCCAAACAGACC 57.477 39.130 0.00 0.00 36.57 3.85
2165 2272 6.744112 TCATGGTTAAATTGTCCAAACAGAC 58.256 36.000 0.00 0.00 36.57 3.51
2166 2273 6.968263 TCATGGTTAAATTGTCCAAACAGA 57.032 33.333 0.00 0.00 36.57 3.41
2167 2274 9.874205 ATAATCATGGTTAAATTGTCCAAACAG 57.126 29.630 1.78 0.00 36.57 3.16
2168 2275 9.650539 CATAATCATGGTTAAATTGTCCAAACA 57.349 29.630 1.78 0.00 34.80 2.83
2169 2276 9.868277 TCATAATCATGGTTAAATTGTCCAAAC 57.132 29.630 1.78 0.00 34.80 2.93
2170 2277 9.868277 GTCATAATCATGGTTAAATTGTCCAAA 57.132 29.630 1.78 0.00 34.80 3.28
2171 2278 9.029368 TGTCATAATCATGGTTAAATTGTCCAA 57.971 29.630 1.78 0.00 34.80 3.53
2172 2279 8.586879 TGTCATAATCATGGTTAAATTGTCCA 57.413 30.769 1.78 0.00 35.64 4.02
2173 2280 9.467258 CATGTCATAATCATGGTTAAATTGTCC 57.533 33.333 1.78 0.00 38.97 4.02
2175 2282 9.806203 CACATGTCATAATCATGGTTAAATTGT 57.194 29.630 1.78 0.77 44.57 2.71
2176 2283 9.251792 CCACATGTCATAATCATGGTTAAATTG 57.748 33.333 1.78 0.00 44.57 2.32
2177 2284 8.423349 CCCACATGTCATAATCATGGTTAAATT 58.577 33.333 1.78 0.00 44.57 1.82
2178 2285 7.015487 CCCCACATGTCATAATCATGGTTAAAT 59.985 37.037 1.78 0.00 44.57 1.40
2179 2286 6.323482 CCCCACATGTCATAATCATGGTTAAA 59.677 38.462 1.78 0.00 44.57 1.52
2180 2287 5.832595 CCCCACATGTCATAATCATGGTTAA 59.167 40.000 1.78 0.00 44.57 2.01
2181 2288 5.384336 CCCCACATGTCATAATCATGGTTA 58.616 41.667 0.00 0.00 44.57 2.85
2182 2289 4.217510 CCCCACATGTCATAATCATGGTT 58.782 43.478 0.00 0.00 44.57 3.67
2183 2290 3.836146 CCCCACATGTCATAATCATGGT 58.164 45.455 0.00 0.00 44.57 3.55
2184 2291 2.559668 GCCCCACATGTCATAATCATGG 59.440 50.000 0.00 0.00 44.57 3.66
2185 2292 2.559668 GGCCCCACATGTCATAATCATG 59.440 50.000 0.00 4.66 45.41 3.07
2186 2293 2.448194 AGGCCCCACATGTCATAATCAT 59.552 45.455 0.00 0.00 0.00 2.45
2187 2294 1.852309 AGGCCCCACATGTCATAATCA 59.148 47.619 0.00 0.00 0.00 2.57
2188 2295 2.233271 CAGGCCCCACATGTCATAATC 58.767 52.381 0.00 0.00 0.00 1.75
2189 2296 1.570501 ACAGGCCCCACATGTCATAAT 59.429 47.619 0.00 0.00 0.00 1.28
2190 2297 0.998928 ACAGGCCCCACATGTCATAA 59.001 50.000 0.00 0.00 0.00 1.90
2191 2298 1.886422 TACAGGCCCCACATGTCATA 58.114 50.000 0.00 0.00 0.00 2.15
2192 2299 1.225373 ATACAGGCCCCACATGTCAT 58.775 50.000 0.00 0.00 0.00 3.06
2193 2300 0.998928 AATACAGGCCCCACATGTCA 59.001 50.000 0.00 0.00 0.00 3.58
2194 2301 1.750778 CAAATACAGGCCCCACATGTC 59.249 52.381 0.00 0.00 0.00 3.06
2195 2302 1.357420 TCAAATACAGGCCCCACATGT 59.643 47.619 0.00 0.00 0.00 3.21
2196 2303 2.142356 TCAAATACAGGCCCCACATG 57.858 50.000 0.00 0.00 0.00 3.21
2197 2304 2.244510 TCATCAAATACAGGCCCCACAT 59.755 45.455 0.00 0.00 0.00 3.21
2198 2305 1.638070 TCATCAAATACAGGCCCCACA 59.362 47.619 0.00 0.00 0.00 4.17
2199 2306 2.435372 TCATCAAATACAGGCCCCAC 57.565 50.000 0.00 0.00 0.00 4.61
2200 2307 2.244510 ACATCATCAAATACAGGCCCCA 59.755 45.455 0.00 0.00 0.00 4.96
2201 2308 2.624838 CACATCATCAAATACAGGCCCC 59.375 50.000 0.00 0.00 0.00 5.80
2202 2309 2.624838 CCACATCATCAAATACAGGCCC 59.375 50.000 0.00 0.00 0.00 5.80
2203 2310 2.035066 GCCACATCATCAAATACAGGCC 59.965 50.000 0.00 0.00 33.68 5.19
2204 2311 2.689471 TGCCACATCATCAAATACAGGC 59.311 45.455 0.00 0.00 39.95 4.85
2205 2312 6.263842 AGTTATGCCACATCATCAAATACAGG 59.736 38.462 0.00 0.00 0.00 4.00
2206 2313 7.136772 CAGTTATGCCACATCATCAAATACAG 58.863 38.462 0.00 0.00 0.00 2.74
2207 2314 6.602803 ACAGTTATGCCACATCATCAAATACA 59.397 34.615 0.00 0.00 0.00 2.29
2208 2315 7.031226 ACAGTTATGCCACATCATCAAATAC 57.969 36.000 0.00 0.00 0.00 1.89
2209 2316 6.827762 TGACAGTTATGCCACATCATCAAATA 59.172 34.615 0.00 0.00 0.00 1.40
2210 2317 5.653330 TGACAGTTATGCCACATCATCAAAT 59.347 36.000 0.00 0.00 0.00 2.32
2211 2318 5.008980 TGACAGTTATGCCACATCATCAAA 58.991 37.500 0.00 0.00 0.00 2.69
2212 2319 4.587891 TGACAGTTATGCCACATCATCAA 58.412 39.130 0.00 0.00 0.00 2.57
2213 2320 4.219264 TGACAGTTATGCCACATCATCA 57.781 40.909 0.00 0.00 0.00 3.07
2214 2321 4.395854 TGTTGACAGTTATGCCACATCATC 59.604 41.667 0.00 0.00 0.00 2.92
2215 2322 4.334552 TGTTGACAGTTATGCCACATCAT 58.665 39.130 0.00 0.00 0.00 2.45
2216 2323 3.749226 TGTTGACAGTTATGCCACATCA 58.251 40.909 0.00 0.00 0.00 3.07
2217 2324 4.475944 GTTGTTGACAGTTATGCCACATC 58.524 43.478 0.00 0.00 0.00 3.06
2218 2325 3.255642 GGTTGTTGACAGTTATGCCACAT 59.744 43.478 0.00 0.00 0.00 3.21
2219 2326 2.621055 GGTTGTTGACAGTTATGCCACA 59.379 45.455 0.00 0.00 0.00 4.17
2220 2327 2.350388 CGGTTGTTGACAGTTATGCCAC 60.350 50.000 0.00 0.00 0.00 5.01
2221 2328 1.876799 CGGTTGTTGACAGTTATGCCA 59.123 47.619 0.00 0.00 0.00 4.92
2222 2329 1.199097 CCGGTTGTTGACAGTTATGCC 59.801 52.381 0.00 0.00 0.00 4.40
2223 2330 2.147958 TCCGGTTGTTGACAGTTATGC 58.852 47.619 0.00 0.00 0.00 3.14
2224 2331 3.399330 ACTCCGGTTGTTGACAGTTATG 58.601 45.455 0.00 0.00 0.00 1.90
2225 2332 3.764237 ACTCCGGTTGTTGACAGTTAT 57.236 42.857 0.00 0.00 0.00 1.89
2226 2333 3.890756 TCTACTCCGGTTGTTGACAGTTA 59.109 43.478 0.00 0.00 0.00 2.24
2227 2334 2.696707 TCTACTCCGGTTGTTGACAGTT 59.303 45.455 0.00 0.00 0.00 3.16
2228 2335 2.313317 TCTACTCCGGTTGTTGACAGT 58.687 47.619 0.00 0.00 0.00 3.55
2229 2336 3.380479 TTCTACTCCGGTTGTTGACAG 57.620 47.619 0.00 0.00 0.00 3.51
2230 2337 3.823281 TTTCTACTCCGGTTGTTGACA 57.177 42.857 0.00 0.00 0.00 3.58
2231 2338 4.024302 CCTTTTTCTACTCCGGTTGTTGAC 60.024 45.833 0.00 0.00 0.00 3.18
2232 2339 4.131596 CCTTTTTCTACTCCGGTTGTTGA 58.868 43.478 0.00 5.89 0.00 3.18
2233 2340 3.252458 CCCTTTTTCTACTCCGGTTGTTG 59.748 47.826 0.00 3.42 0.00 3.33
2234 2341 3.117776 ACCCTTTTTCTACTCCGGTTGTT 60.118 43.478 0.00 0.00 0.00 2.83
2235 2342 2.440627 ACCCTTTTTCTACTCCGGTTGT 59.559 45.455 0.00 4.59 0.00 3.32
2236 2343 3.072211 GACCCTTTTTCTACTCCGGTTG 58.928 50.000 0.00 0.00 0.00 3.77
2237 2344 2.707257 TGACCCTTTTTCTACTCCGGTT 59.293 45.455 0.00 0.00 0.00 4.44
2238 2345 2.332117 TGACCCTTTTTCTACTCCGGT 58.668 47.619 0.00 0.00 0.00 5.28
2239 2346 3.197983 AGATGACCCTTTTTCTACTCCGG 59.802 47.826 0.00 0.00 0.00 5.14
2240 2347 4.184629 CAGATGACCCTTTTTCTACTCCG 58.815 47.826 0.00 0.00 0.00 4.63
2241 2348 5.167303 ACAGATGACCCTTTTTCTACTCC 57.833 43.478 0.00 0.00 0.00 3.85
2242 2349 5.179533 GGACAGATGACCCTTTTTCTACTC 58.820 45.833 0.00 0.00 0.00 2.59
2931 3050 4.295199 AACCGGGACCAAAGGCCC 62.295 66.667 6.32 0.00 36.26 5.80
2932 3051 2.989253 CAACCGGGACCAAAGGCC 60.989 66.667 6.32 0.00 0.00 5.19
2933 3052 2.989253 CCAACCGGGACCAAAGGC 60.989 66.667 6.32 0.00 40.01 4.35
2934 3053 1.901464 CACCAACCGGGACCAAAGG 60.901 63.158 6.32 0.00 41.15 3.11
2935 3054 1.901464 CCACCAACCGGGACCAAAG 60.901 63.158 6.32 0.00 41.15 2.77
2936 3055 2.196229 CCACCAACCGGGACCAAA 59.804 61.111 6.32 0.00 41.15 3.28
2937 3056 4.589675 GCCACCAACCGGGACCAA 62.590 66.667 6.32 0.00 41.15 3.67
2940 3059 2.400269 TTAGTGCCACCAACCGGGAC 62.400 60.000 6.32 0.00 44.66 4.46
2941 3060 2.148052 TTAGTGCCACCAACCGGGA 61.148 57.895 6.32 0.00 41.15 5.14
2942 3061 1.969589 GTTAGTGCCACCAACCGGG 60.970 63.158 6.32 0.00 44.81 5.73
2943 3062 1.969589 GGTTAGTGCCACCAACCGG 60.970 63.158 9.41 0.00 32.96 5.28
2944 3063 3.663202 GGTTAGTGCCACCAACCG 58.337 61.111 9.41 0.00 32.96 4.44
2945 3064 1.969589 CCGGTTAGTGCCACCAACC 60.970 63.158 14.30 14.30 38.68 3.77
2946 3065 1.969589 CCCGGTTAGTGCCACCAAC 60.970 63.158 0.00 0.00 33.36 3.77
2947 3066 2.148052 TCCCGGTTAGTGCCACCAA 61.148 57.895 0.00 0.00 33.36 3.67
2948 3067 2.527123 TCCCGGTTAGTGCCACCA 60.527 61.111 0.00 0.00 33.36 4.17
2949 3068 2.046604 GTCCCGGTTAGTGCCACC 60.047 66.667 0.00 0.00 0.00 4.61
2950 3069 2.046604 GGTCCCGGTTAGTGCCAC 60.047 66.667 0.00 0.00 0.00 5.01
2951 3070 1.493854 ATTGGTCCCGGTTAGTGCCA 61.494 55.000 0.00 0.00 0.00 4.92
2952 3071 0.542805 TATTGGTCCCGGTTAGTGCC 59.457 55.000 0.00 0.00 0.00 5.01
2953 3072 1.474498 CCTATTGGTCCCGGTTAGTGC 60.474 57.143 0.00 0.00 0.00 4.40
2954 3073 1.474498 GCCTATTGGTCCCGGTTAGTG 60.474 57.143 0.00 0.00 35.27 2.74
2955 3074 0.835276 GCCTATTGGTCCCGGTTAGT 59.165 55.000 0.00 0.00 35.27 2.24
2956 3075 0.834612 TGCCTATTGGTCCCGGTTAG 59.165 55.000 0.00 0.00 35.27 2.34
2957 3076 1.418637 GATGCCTATTGGTCCCGGTTA 59.581 52.381 0.00 0.00 35.27 2.85
2958 3077 0.182775 GATGCCTATTGGTCCCGGTT 59.817 55.000 0.00 0.00 35.27 4.44
2959 3078 1.705997 GGATGCCTATTGGTCCCGGT 61.706 60.000 0.00 0.00 35.27 5.28
2960 3079 1.073199 GGATGCCTATTGGTCCCGG 59.927 63.158 0.00 0.00 35.27 5.73
2961 3080 4.800554 GGATGCCTATTGGTCCCG 57.199 61.111 0.00 0.00 35.27 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.