Multiple sequence alignment - TraesCS2D01G596500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G596500 chr2D 100.000 2857 0 0 1 2857 649390608 649393464 0.000000e+00 5276
1 TraesCS2D01G596500 chr2D 92.845 2334 146 15 1 2332 7062361 7060047 0.000000e+00 3365
2 TraesCS2D01G596500 chr4D 95.011 2345 98 9 1 2335 97507346 97505011 0.000000e+00 3664
3 TraesCS2D01G596500 chr4D 94.067 2343 116 9 1 2339 388818397 388820720 0.000000e+00 3535
4 TraesCS2D01G596500 chr4D 85.141 498 66 7 2365 2857 152899130 152898636 1.180000e-138 503
5 TraesCS2D01G596500 chr6B 94.130 2334 128 7 2 2334 695470487 695472812 0.000000e+00 3542
6 TraesCS2D01G596500 chr3D 94.065 2342 121 9 1 2334 587305222 587302891 0.000000e+00 3539
7 TraesCS2D01G596500 chr5B 93.673 2339 135 9 1 2332 511343952 511346284 0.000000e+00 3487
8 TraesCS2D01G596500 chr5B 89.495 495 37 1 1 495 609893046 609893525 1.880000e-171 612
9 TraesCS2D01G596500 chr5B 88.584 438 47 3 2422 2857 638349411 638349847 1.950000e-146 529
10 TraesCS2D01G596500 chr4A 93.622 2336 132 10 5 2332 739881925 739879599 0.000000e+00 3472
11 TraesCS2D01G596500 chr1B 93.065 2336 149 9 1 2332 682295788 682298114 0.000000e+00 3404
12 TraesCS2D01G596500 chrUn 92.686 2338 146 16 1 2332 1911369 1909051 0.000000e+00 3347
13 TraesCS2D01G596500 chrUn 88.438 493 51 4 2367 2857 58709942 58709454 8.820000e-165 590
14 TraesCS2D01G596500 chr5D 96.755 493 16 0 2365 2857 473013180 473013672 0.000000e+00 822
15 TraesCS2D01G596500 chr5A 95.510 490 22 0 2368 2857 342451842 342451353 0.000000e+00 784
16 TraesCS2D01G596500 chr7B 95.316 491 23 0 2367 2857 575441121 575440631 0.000000e+00 780
17 TraesCS2D01G596500 chr7B 93.609 266 17 0 4 269 685398603 685398338 5.740000e-107 398
18 TraesCS2D01G596500 chr2B 95.142 494 23 1 2365 2857 110675836 110675343 0.000000e+00 778
19 TraesCS2D01G596500 chr2B 89.474 494 48 4 2366 2857 513267238 513266747 3.130000e-174 621
20 TraesCS2D01G596500 chr2A 87.726 497 53 5 2367 2857 779306105 779306599 8.880000e-160 573
21 TraesCS2D01G596500 chr3B 80.279 502 79 16 2365 2857 243800489 243800979 7.520000e-96 361
22 TraesCS2D01G596500 chr3A 91.176 204 18 0 1 204 688624997 688624794 7.800000e-71 278


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G596500 chr2D 649390608 649393464 2856 False 5276 5276 100.000 1 2857 1 chr2D.!!$F1 2856
1 TraesCS2D01G596500 chr2D 7060047 7062361 2314 True 3365 3365 92.845 1 2332 1 chr2D.!!$R1 2331
2 TraesCS2D01G596500 chr4D 97505011 97507346 2335 True 3664 3664 95.011 1 2335 1 chr4D.!!$R1 2334
3 TraesCS2D01G596500 chr4D 388818397 388820720 2323 False 3535 3535 94.067 1 2339 1 chr4D.!!$F1 2338
4 TraesCS2D01G596500 chr6B 695470487 695472812 2325 False 3542 3542 94.130 2 2334 1 chr6B.!!$F1 2332
5 TraesCS2D01G596500 chr3D 587302891 587305222 2331 True 3539 3539 94.065 1 2334 1 chr3D.!!$R1 2333
6 TraesCS2D01G596500 chr5B 511343952 511346284 2332 False 3487 3487 93.673 1 2332 1 chr5B.!!$F1 2331
7 TraesCS2D01G596500 chr4A 739879599 739881925 2326 True 3472 3472 93.622 5 2332 1 chr4A.!!$R1 2327
8 TraesCS2D01G596500 chr1B 682295788 682298114 2326 False 3404 3404 93.065 1 2332 1 chr1B.!!$F1 2331
9 TraesCS2D01G596500 chrUn 1909051 1911369 2318 True 3347 3347 92.686 1 2332 1 chrUn.!!$R1 2331

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 1.371558 GAGGAGGTCGCCAAGTTGT 59.628 57.895 1.45 0.0 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1980 2008 0.107017 CCGGCCTCCAGAATGAATGT 60.107 55.0 0.0 0.0 39.69 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 1.371558 GAGGAGGTCGCCAAGTTGT 59.628 57.895 1.45 0.00 0.00 3.32
69 70 1.682684 GAGGAGGGAACGGAGAGCA 60.683 63.158 0.00 0.00 0.00 4.26
688 694 3.470888 CCCCGATGAAGAGGCCGT 61.471 66.667 0.00 0.00 0.00 5.68
922 940 3.818180 CAAGCTTGGATGGAGATTAGCT 58.182 45.455 19.14 0.00 40.43 3.32
1083 1101 3.890756 TGTTCATCCAACAAGAGTGCAAT 59.109 39.130 0.00 0.00 42.35 3.56
1194 1213 1.524621 CCTTGCTACGGCCATGAGG 60.525 63.158 2.24 0.00 37.74 3.86
1212 1231 2.528797 GCTTCGGCCGTGTATATGG 58.471 57.895 27.15 8.34 35.97 2.74
1235 1254 3.768406 TGCATGTTCACTTGTTGTTGAC 58.232 40.909 0.00 0.00 0.00 3.18
1285 1305 1.523154 GCATTCAAGGCCCGACACAA 61.523 55.000 0.00 0.00 0.00 3.33
1514 1535 3.093814 TGAGACTTTGCATGGCATGATT 58.906 40.909 30.69 8.88 38.76 2.57
1535 1556 2.287584 TCCCAAAAGGATGTGAGGGAT 58.712 47.619 0.00 0.00 40.93 3.85
1546 1567 2.259917 TGTGAGGGATGAGAAGAAGCA 58.740 47.619 0.00 0.00 0.00 3.91
1567 1589 1.758783 CAAAGCAAGGACGAGCAAAC 58.241 50.000 0.00 0.00 0.00 2.93
1813 1835 2.350522 GATCATGAGCGTGGACTTGTT 58.649 47.619 0.09 0.00 0.00 2.83
1869 1892 2.392662 CCAGGTAGAAGGAGATGCTCA 58.607 52.381 0.00 0.00 31.08 4.26
1980 2008 1.525077 AGTGTGCCGGCGAGAAAAA 60.525 52.632 23.90 0.00 0.00 1.94
2153 2200 1.422531 AGGGCTTGGCATTTGAAACA 58.577 45.000 0.00 0.00 0.00 2.83
2262 2309 4.157120 CCCGGACACGACCCCATC 62.157 72.222 0.73 0.00 44.60 3.51
2279 2326 1.342672 ATCGCCCTACCCAAACGGAT 61.343 55.000 0.00 0.00 34.64 4.18
2335 2387 1.002134 CGGTGGAGTTGGCCTCATT 60.002 57.895 3.32 0.00 42.40 2.57
2339 2391 2.213499 GTGGAGTTGGCCTCATTATCG 58.787 52.381 3.32 0.00 42.40 2.92
2340 2392 1.230324 GGAGTTGGCCTCATTATCGC 58.770 55.000 3.32 0.00 42.40 4.58
2341 2393 0.861837 GAGTTGGCCTCATTATCGCG 59.138 55.000 3.32 0.00 40.17 5.87
2342 2394 1.160329 AGTTGGCCTCATTATCGCGC 61.160 55.000 3.32 0.00 0.00 6.86
2343 2395 1.146041 TTGGCCTCATTATCGCGCT 59.854 52.632 5.56 0.00 0.00 5.92
2344 2396 0.880278 TTGGCCTCATTATCGCGCTC 60.880 55.000 5.56 0.00 0.00 5.03
2345 2397 1.005630 GGCCTCATTATCGCGCTCT 60.006 57.895 5.56 0.00 0.00 4.09
2346 2398 1.287730 GGCCTCATTATCGCGCTCTG 61.288 60.000 5.56 0.00 0.00 3.35
2347 2399 0.319040 GCCTCATTATCGCGCTCTGA 60.319 55.000 5.56 0.48 0.00 3.27
2348 2400 1.869754 GCCTCATTATCGCGCTCTGAA 60.870 52.381 5.56 0.00 0.00 3.02
2349 2401 2.681706 CCTCATTATCGCGCTCTGAAT 58.318 47.619 5.56 0.00 0.00 2.57
2350 2402 2.411069 CCTCATTATCGCGCTCTGAATG 59.589 50.000 5.56 10.04 0.00 2.67
2351 2403 3.311966 CTCATTATCGCGCTCTGAATGA 58.688 45.455 17.34 17.34 35.71 2.57
2352 2404 3.917988 TCATTATCGCGCTCTGAATGAT 58.082 40.909 15.50 7.97 32.90 2.45
2353 2405 3.676646 TCATTATCGCGCTCTGAATGATG 59.323 43.478 15.50 1.19 32.90 3.07
2354 2406 2.800881 TATCGCGCTCTGAATGATGT 57.199 45.000 5.56 0.00 0.00 3.06
2355 2407 1.945387 ATCGCGCTCTGAATGATGTT 58.055 45.000 5.56 0.00 0.00 2.71
2356 2408 1.725641 TCGCGCTCTGAATGATGTTT 58.274 45.000 5.56 0.00 0.00 2.83
2357 2409 1.394572 TCGCGCTCTGAATGATGTTTG 59.605 47.619 5.56 0.00 0.00 2.93
2358 2410 1.394572 CGCGCTCTGAATGATGTTTGA 59.605 47.619 5.56 0.00 0.00 2.69
2359 2411 2.031314 CGCGCTCTGAATGATGTTTGAT 59.969 45.455 5.56 0.00 0.00 2.57
2360 2412 3.486375 CGCGCTCTGAATGATGTTTGATT 60.486 43.478 5.56 0.00 0.00 2.57
2361 2413 4.260334 CGCGCTCTGAATGATGTTTGATTA 60.260 41.667 5.56 0.00 0.00 1.75
2362 2414 5.572211 GCGCTCTGAATGATGTTTGATTAA 58.428 37.500 0.00 0.00 0.00 1.40
2363 2415 5.453587 GCGCTCTGAATGATGTTTGATTAAC 59.546 40.000 0.00 0.00 37.26 2.01
2364 2416 6.676456 GCGCTCTGAATGATGTTTGATTAACT 60.676 38.462 0.00 0.00 37.64 2.24
2365 2417 7.246311 CGCTCTGAATGATGTTTGATTAACTT 58.754 34.615 0.00 0.00 37.64 2.66
2366 2418 7.752239 CGCTCTGAATGATGTTTGATTAACTTT 59.248 33.333 0.00 0.00 37.64 2.66
2367 2419 9.415544 GCTCTGAATGATGTTTGATTAACTTTT 57.584 29.630 0.00 0.00 37.64 2.27
2388 2440 1.737838 TTTTGACAGAGCTATGGCGG 58.262 50.000 13.85 0.00 44.37 6.13
2389 2441 0.107703 TTTGACAGAGCTATGGCGGG 60.108 55.000 13.85 0.00 44.37 6.13
2390 2442 2.280457 GACAGAGCTATGGCGGGC 60.280 66.667 13.85 0.00 44.37 6.13
2391 2443 2.765807 ACAGAGCTATGGCGGGCT 60.766 61.111 13.85 0.00 44.37 5.19
2392 2444 2.317149 GACAGAGCTATGGCGGGCTT 62.317 60.000 13.85 0.00 44.37 4.35
2393 2445 1.048724 ACAGAGCTATGGCGGGCTTA 61.049 55.000 13.85 0.00 44.37 3.09
2394 2446 0.601311 CAGAGCTATGGCGGGCTTAC 60.601 60.000 0.00 0.00 44.37 2.34
2395 2447 1.664965 GAGCTATGGCGGGCTTACG 60.665 63.158 2.38 0.00 44.37 3.18
2406 2458 3.497031 GCTTACGCCGGCCTGAAC 61.497 66.667 23.46 3.95 0.00 3.18
2407 2459 2.818274 CTTACGCCGGCCTGAACC 60.818 66.667 23.46 0.00 0.00 3.62
2408 2460 3.599285 CTTACGCCGGCCTGAACCA 62.599 63.158 23.46 0.00 0.00 3.67
2409 2461 2.869503 CTTACGCCGGCCTGAACCAT 62.870 60.000 23.46 0.00 0.00 3.55
2410 2462 2.472414 TTACGCCGGCCTGAACCATT 62.472 55.000 23.46 0.00 0.00 3.16
2411 2463 2.472414 TACGCCGGCCTGAACCATTT 62.472 55.000 23.46 0.00 0.00 2.32
2412 2464 2.635443 CGCCGGCCTGAACCATTTT 61.635 57.895 23.46 0.00 0.00 1.82
2413 2465 1.215382 GCCGGCCTGAACCATTTTC 59.785 57.895 18.11 0.00 0.00 2.29
2414 2466 1.531739 GCCGGCCTGAACCATTTTCA 61.532 55.000 18.11 0.00 0.00 2.69
2415 2467 1.185315 CCGGCCTGAACCATTTTCAT 58.815 50.000 0.00 0.00 0.00 2.57
2416 2468 1.550072 CCGGCCTGAACCATTTTCATT 59.450 47.619 0.00 0.00 0.00 2.57
2417 2469 2.757868 CCGGCCTGAACCATTTTCATTA 59.242 45.455 0.00 0.00 0.00 1.90
2418 2470 3.384467 CCGGCCTGAACCATTTTCATTAT 59.616 43.478 0.00 0.00 0.00 1.28
2419 2471 4.499696 CCGGCCTGAACCATTTTCATTATC 60.500 45.833 0.00 0.00 0.00 1.75
2420 2472 4.097741 CGGCCTGAACCATTTTCATTATCA 59.902 41.667 0.00 0.00 0.00 2.15
2421 2473 5.221303 CGGCCTGAACCATTTTCATTATCAT 60.221 40.000 0.00 0.00 0.00 2.45
2422 2474 6.016360 CGGCCTGAACCATTTTCATTATCATA 60.016 38.462 0.00 0.00 0.00 2.15
2423 2475 7.469870 CGGCCTGAACCATTTTCATTATCATAA 60.470 37.037 0.00 0.00 0.00 1.90
2424 2476 7.869429 GGCCTGAACCATTTTCATTATCATAAG 59.131 37.037 0.00 0.00 0.00 1.73
2425 2477 8.416329 GCCTGAACCATTTTCATTATCATAAGT 58.584 33.333 0.00 0.00 0.00 2.24
2444 2496 9.856488 TCATAAGTAAGACTGAGATACAAACAC 57.144 33.333 0.00 0.00 0.00 3.32
2445 2497 9.639601 CATAAGTAAGACTGAGATACAAACACA 57.360 33.333 0.00 0.00 0.00 3.72
2447 2499 7.948278 AGTAAGACTGAGATACAAACACAAC 57.052 36.000 0.00 0.00 0.00 3.32
2448 2500 5.907197 AAGACTGAGATACAAACACAACG 57.093 39.130 0.00 0.00 0.00 4.10
2449 2501 4.307432 AGACTGAGATACAAACACAACGG 58.693 43.478 0.00 0.00 0.00 4.44
2450 2502 2.806244 ACTGAGATACAAACACAACGGC 59.194 45.455 0.00 0.00 0.00 5.68
2451 2503 3.067106 CTGAGATACAAACACAACGGCT 58.933 45.455 0.00 0.00 0.00 5.52
2452 2504 4.242475 CTGAGATACAAACACAACGGCTA 58.758 43.478 0.00 0.00 0.00 3.93
2453 2505 3.991773 TGAGATACAAACACAACGGCTAC 59.008 43.478 0.00 0.00 0.00 3.58
2454 2506 3.991773 GAGATACAAACACAACGGCTACA 59.008 43.478 0.00 0.00 0.00 2.74
2455 2507 3.744426 AGATACAAACACAACGGCTACAC 59.256 43.478 0.00 0.00 0.00 2.90
2456 2508 1.740297 ACAAACACAACGGCTACACA 58.260 45.000 0.00 0.00 0.00 3.72
2457 2509 2.085320 ACAAACACAACGGCTACACAA 58.915 42.857 0.00 0.00 0.00 3.33
2458 2510 2.096819 ACAAACACAACGGCTACACAAG 59.903 45.455 0.00 0.00 0.00 3.16
2459 2511 2.032680 AACACAACGGCTACACAAGT 57.967 45.000 0.00 0.00 0.00 3.16
2460 2512 1.295792 ACACAACGGCTACACAAGTG 58.704 50.000 0.00 0.00 0.00 3.16
2461 2513 0.041312 CACAACGGCTACACAAGTGC 60.041 55.000 0.00 0.00 0.00 4.40
2462 2514 0.462937 ACAACGGCTACACAAGTGCA 60.463 50.000 0.00 0.00 0.00 4.57
2463 2515 0.235665 CAACGGCTACACAAGTGCAG 59.764 55.000 0.00 0.00 0.00 4.41
2464 2516 1.507141 AACGGCTACACAAGTGCAGC 61.507 55.000 15.37 15.37 46.50 5.25
2467 2519 1.576421 GCTACACAAGTGCAGCACC 59.424 57.895 22.41 4.38 46.47 5.01
2468 2520 1.856265 GCTACACAAGTGCAGCACCC 61.856 60.000 22.41 0.00 46.47 4.61
2469 2521 0.534877 CTACACAAGTGCAGCACCCA 60.535 55.000 22.41 0.39 34.49 4.51
2470 2522 0.106967 TACACAAGTGCAGCACCCAA 60.107 50.000 22.41 0.00 34.49 4.12
2471 2523 1.066257 CACAAGTGCAGCACCCAAC 59.934 57.895 22.41 0.00 34.49 3.77
2472 2524 1.379710 ACAAGTGCAGCACCCAACA 60.380 52.632 22.41 0.00 34.49 3.33
2473 2525 1.066257 CAAGTGCAGCACCCAACAC 59.934 57.895 22.41 0.00 34.49 3.32
2474 2526 1.379710 AAGTGCAGCACCCAACACA 60.380 52.632 22.41 0.00 34.49 3.72
2475 2527 0.756442 AAGTGCAGCACCCAACACAT 60.756 50.000 22.41 0.00 34.49 3.21
2476 2528 0.110295 AGTGCAGCACCCAACACATA 59.890 50.000 22.41 0.00 34.49 2.29
2477 2529 0.523072 GTGCAGCACCCAACACATAG 59.477 55.000 15.27 0.00 33.23 2.23
2478 2530 0.399833 TGCAGCACCCAACACATAGA 59.600 50.000 0.00 0.00 0.00 1.98
2479 2531 1.202867 TGCAGCACCCAACACATAGAA 60.203 47.619 0.00 0.00 0.00 2.10
2480 2532 1.470098 GCAGCACCCAACACATAGAAG 59.530 52.381 0.00 0.00 0.00 2.85
2481 2533 2.875672 GCAGCACCCAACACATAGAAGA 60.876 50.000 0.00 0.00 0.00 2.87
2482 2534 3.411446 CAGCACCCAACACATAGAAGAA 58.589 45.455 0.00 0.00 0.00 2.52
2483 2535 3.438087 CAGCACCCAACACATAGAAGAAG 59.562 47.826 0.00 0.00 0.00 2.85
2484 2536 2.749621 GCACCCAACACATAGAAGAAGG 59.250 50.000 0.00 0.00 0.00 3.46
2485 2537 3.559171 GCACCCAACACATAGAAGAAGGA 60.559 47.826 0.00 0.00 0.00 3.36
2486 2538 4.651778 CACCCAACACATAGAAGAAGGAA 58.348 43.478 0.00 0.00 0.00 3.36
2487 2539 5.256474 CACCCAACACATAGAAGAAGGAAT 58.744 41.667 0.00 0.00 0.00 3.01
2488 2540 5.124457 CACCCAACACATAGAAGAAGGAATG 59.876 44.000 0.00 0.00 0.00 2.67
2489 2541 4.096984 CCCAACACATAGAAGAAGGAATGC 59.903 45.833 0.00 0.00 0.00 3.56
2490 2542 4.201851 CCAACACATAGAAGAAGGAATGCG 60.202 45.833 0.00 0.00 0.00 4.73
2491 2543 3.535561 ACACATAGAAGAAGGAATGCGG 58.464 45.455 0.00 0.00 0.00 5.69
2492 2544 3.055094 ACACATAGAAGAAGGAATGCGGT 60.055 43.478 0.00 0.00 0.00 5.68
2493 2545 4.161565 ACACATAGAAGAAGGAATGCGGTA 59.838 41.667 0.00 0.00 0.00 4.02
2494 2546 4.508124 CACATAGAAGAAGGAATGCGGTAC 59.492 45.833 0.00 0.00 0.00 3.34
2495 2547 4.161565 ACATAGAAGAAGGAATGCGGTACA 59.838 41.667 0.00 0.00 0.00 2.90
2496 2548 3.695830 AGAAGAAGGAATGCGGTACAA 57.304 42.857 0.00 0.00 0.00 2.41
2497 2549 3.335579 AGAAGAAGGAATGCGGTACAAC 58.664 45.455 0.00 0.00 0.00 3.32
2498 2550 2.851263 AGAAGGAATGCGGTACAACA 57.149 45.000 0.00 0.00 0.00 3.33
2499 2551 3.134574 AGAAGGAATGCGGTACAACAA 57.865 42.857 0.00 0.00 0.00 2.83
2500 2552 3.482436 AGAAGGAATGCGGTACAACAAA 58.518 40.909 0.00 0.00 0.00 2.83
2501 2553 3.502211 AGAAGGAATGCGGTACAACAAAG 59.498 43.478 0.00 0.00 0.00 2.77
2502 2554 3.134574 AGGAATGCGGTACAACAAAGA 57.865 42.857 0.00 0.00 0.00 2.52
2503 2555 3.482436 AGGAATGCGGTACAACAAAGAA 58.518 40.909 0.00 0.00 0.00 2.52
2504 2556 3.502211 AGGAATGCGGTACAACAAAGAAG 59.498 43.478 0.00 0.00 0.00 2.85
2505 2557 3.500680 GGAATGCGGTACAACAAAGAAGA 59.499 43.478 0.00 0.00 0.00 2.87
2506 2558 4.023536 GGAATGCGGTACAACAAAGAAGAA 60.024 41.667 0.00 0.00 0.00 2.52
2507 2559 3.955771 TGCGGTACAACAAAGAAGAAC 57.044 42.857 0.00 0.00 0.00 3.01
2508 2560 2.614983 TGCGGTACAACAAAGAAGAACC 59.385 45.455 0.00 0.00 0.00 3.62
2509 2561 2.614983 GCGGTACAACAAAGAAGAACCA 59.385 45.455 0.00 0.00 0.00 3.67
2510 2562 3.303791 GCGGTACAACAAAGAAGAACCAG 60.304 47.826 0.00 0.00 0.00 4.00
2511 2563 3.250040 CGGTACAACAAAGAAGAACCAGG 59.750 47.826 0.00 0.00 0.00 4.45
2512 2564 4.457466 GGTACAACAAAGAAGAACCAGGA 58.543 43.478 0.00 0.00 0.00 3.86
2513 2565 4.885325 GGTACAACAAAGAAGAACCAGGAA 59.115 41.667 0.00 0.00 0.00 3.36
2514 2566 5.358725 GGTACAACAAAGAAGAACCAGGAAA 59.641 40.000 0.00 0.00 0.00 3.13
2515 2567 6.040504 GGTACAACAAAGAAGAACCAGGAAAT 59.959 38.462 0.00 0.00 0.00 2.17
2516 2568 5.906073 ACAACAAAGAAGAACCAGGAAATG 58.094 37.500 0.00 0.00 0.00 2.32
2517 2569 5.656416 ACAACAAAGAAGAACCAGGAAATGA 59.344 36.000 0.00 0.00 0.00 2.57
2518 2570 6.183360 ACAACAAAGAAGAACCAGGAAATGAG 60.183 38.462 0.00 0.00 0.00 2.90
2519 2571 5.694995 ACAAAGAAGAACCAGGAAATGAGA 58.305 37.500 0.00 0.00 0.00 3.27
2520 2572 6.310149 ACAAAGAAGAACCAGGAAATGAGAT 58.690 36.000 0.00 0.00 0.00 2.75
2521 2573 7.461749 ACAAAGAAGAACCAGGAAATGAGATA 58.538 34.615 0.00 0.00 0.00 1.98
2522 2574 7.944554 ACAAAGAAGAACCAGGAAATGAGATAA 59.055 33.333 0.00 0.00 0.00 1.75
2523 2575 8.796475 CAAAGAAGAACCAGGAAATGAGATAAA 58.204 33.333 0.00 0.00 0.00 1.40
2524 2576 7.929941 AGAAGAACCAGGAAATGAGATAAAC 57.070 36.000 0.00 0.00 0.00 2.01
2525 2577 7.461749 AGAAGAACCAGGAAATGAGATAAACA 58.538 34.615 0.00 0.00 0.00 2.83
2526 2578 7.944554 AGAAGAACCAGGAAATGAGATAAACAA 59.055 33.333 0.00 0.00 0.00 2.83
2527 2579 8.477419 AAGAACCAGGAAATGAGATAAACAAA 57.523 30.769 0.00 0.00 0.00 2.83
2528 2580 7.886338 AGAACCAGGAAATGAGATAAACAAAC 58.114 34.615 0.00 0.00 0.00 2.93
2529 2581 7.505585 AGAACCAGGAAATGAGATAAACAAACA 59.494 33.333 0.00 0.00 0.00 2.83
2530 2582 7.219484 ACCAGGAAATGAGATAAACAAACAG 57.781 36.000 0.00 0.00 0.00 3.16
2531 2583 6.095377 CCAGGAAATGAGATAAACAAACAGC 58.905 40.000 0.00 0.00 0.00 4.40
2532 2584 6.095377 CAGGAAATGAGATAAACAAACAGCC 58.905 40.000 0.00 0.00 0.00 4.85
2533 2585 5.095490 GGAAATGAGATAAACAAACAGCCG 58.905 41.667 0.00 0.00 0.00 5.52
2534 2586 5.106317 GGAAATGAGATAAACAAACAGCCGA 60.106 40.000 0.00 0.00 0.00 5.54
2535 2587 4.946784 ATGAGATAAACAAACAGCCGAC 57.053 40.909 0.00 0.00 0.00 4.79
2536 2588 3.734463 TGAGATAAACAAACAGCCGACA 58.266 40.909 0.00 0.00 0.00 4.35
2537 2589 3.496884 TGAGATAAACAAACAGCCGACAC 59.503 43.478 0.00 0.00 0.00 3.67
2538 2590 2.812011 AGATAAACAAACAGCCGACACC 59.188 45.455 0.00 0.00 0.00 4.16
2539 2591 2.039818 TAAACAAACAGCCGACACCA 57.960 45.000 0.00 0.00 0.00 4.17
2540 2592 1.178276 AAACAAACAGCCGACACCAA 58.822 45.000 0.00 0.00 0.00 3.67
2541 2593 0.738389 AACAAACAGCCGACACCAAG 59.262 50.000 0.00 0.00 0.00 3.61
2542 2594 0.107410 ACAAACAGCCGACACCAAGA 60.107 50.000 0.00 0.00 0.00 3.02
2543 2595 1.021202 CAAACAGCCGACACCAAGAA 58.979 50.000 0.00 0.00 0.00 2.52
2544 2596 1.608590 CAAACAGCCGACACCAAGAAT 59.391 47.619 0.00 0.00 0.00 2.40
2545 2597 1.981256 AACAGCCGACACCAAGAATT 58.019 45.000 0.00 0.00 0.00 2.17
2546 2598 1.981256 ACAGCCGACACCAAGAATTT 58.019 45.000 0.00 0.00 0.00 1.82
2547 2599 3.134574 ACAGCCGACACCAAGAATTTA 57.865 42.857 0.00 0.00 0.00 1.40
2548 2600 3.074412 ACAGCCGACACCAAGAATTTAG 58.926 45.455 0.00 0.00 0.00 1.85
2549 2601 2.084546 AGCCGACACCAAGAATTTAGC 58.915 47.619 0.00 0.00 0.00 3.09
2550 2602 1.810151 GCCGACACCAAGAATTTAGCA 59.190 47.619 0.00 0.00 0.00 3.49
2551 2603 2.423538 GCCGACACCAAGAATTTAGCAT 59.576 45.455 0.00 0.00 0.00 3.79
2552 2604 3.487544 GCCGACACCAAGAATTTAGCATC 60.488 47.826 0.00 0.00 0.00 3.91
2553 2605 3.065371 CCGACACCAAGAATTTAGCATCC 59.935 47.826 0.00 0.00 0.00 3.51
2554 2606 3.689161 CGACACCAAGAATTTAGCATCCA 59.311 43.478 0.00 0.00 0.00 3.41
2555 2607 4.336433 CGACACCAAGAATTTAGCATCCAT 59.664 41.667 0.00 0.00 0.00 3.41
2556 2608 5.504665 CGACACCAAGAATTTAGCATCCATC 60.505 44.000 0.00 0.00 0.00 3.51
2557 2609 5.263599 ACACCAAGAATTTAGCATCCATCA 58.736 37.500 0.00 0.00 0.00 3.07
2558 2610 5.126061 ACACCAAGAATTTAGCATCCATCAC 59.874 40.000 0.00 0.00 0.00 3.06
2559 2611 4.646492 ACCAAGAATTTAGCATCCATCACC 59.354 41.667 0.00 0.00 0.00 4.02
2560 2612 4.646040 CCAAGAATTTAGCATCCATCACCA 59.354 41.667 0.00 0.00 0.00 4.17
2561 2613 5.450965 CCAAGAATTTAGCATCCATCACCAC 60.451 44.000 0.00 0.00 0.00 4.16
2562 2614 5.121380 AGAATTTAGCATCCATCACCACT 57.879 39.130 0.00 0.00 0.00 4.00
2563 2615 5.128919 AGAATTTAGCATCCATCACCACTC 58.871 41.667 0.00 0.00 0.00 3.51
2564 2616 2.602257 TTAGCATCCATCACCACTCG 57.398 50.000 0.00 0.00 0.00 4.18
2565 2617 1.485124 TAGCATCCATCACCACTCGT 58.515 50.000 0.00 0.00 0.00 4.18
2566 2618 1.485124 AGCATCCATCACCACTCGTA 58.515 50.000 0.00 0.00 0.00 3.43
2567 2619 1.410517 AGCATCCATCACCACTCGTAG 59.589 52.381 0.00 0.00 0.00 3.51
2568 2620 1.409064 GCATCCATCACCACTCGTAGA 59.591 52.381 0.00 0.00 0.00 2.59
2569 2621 2.799917 GCATCCATCACCACTCGTAGAC 60.800 54.545 0.00 0.00 0.00 2.59
2570 2622 1.471119 TCCATCACCACTCGTAGACC 58.529 55.000 0.00 0.00 0.00 3.85
2571 2623 1.182667 CCATCACCACTCGTAGACCA 58.817 55.000 0.00 0.00 0.00 4.02
2572 2624 1.757118 CCATCACCACTCGTAGACCAT 59.243 52.381 0.00 0.00 0.00 3.55
2573 2625 2.481969 CCATCACCACTCGTAGACCATG 60.482 54.545 0.00 0.00 0.00 3.66
2574 2626 2.209690 TCACCACTCGTAGACCATGA 57.790 50.000 0.00 0.00 0.00 3.07
2575 2627 2.092323 TCACCACTCGTAGACCATGAG 58.908 52.381 0.00 0.00 44.66 2.90
2576 2628 1.135139 CACCACTCGTAGACCATGAGG 59.865 57.143 0.00 0.00 43.59 3.86
2577 2629 1.005569 ACCACTCGTAGACCATGAGGA 59.994 52.381 0.00 0.00 43.59 3.71
2578 2630 1.678627 CCACTCGTAGACCATGAGGAG 59.321 57.143 0.00 0.00 43.59 3.69
2579 2631 1.066303 CACTCGTAGACCATGAGGAGC 59.934 57.143 0.00 0.00 43.59 4.70
2580 2632 0.309302 CTCGTAGACCATGAGGAGCG 59.691 60.000 0.00 0.00 36.74 5.03
2581 2633 1.101635 TCGTAGACCATGAGGAGCGG 61.102 60.000 0.00 0.00 38.69 5.52
2582 2634 1.742768 GTAGACCATGAGGAGCGGG 59.257 63.158 0.00 0.00 38.69 6.13
2583 2635 0.755698 GTAGACCATGAGGAGCGGGA 60.756 60.000 0.00 0.00 38.69 5.14
2584 2636 0.032515 TAGACCATGAGGAGCGGGAA 60.033 55.000 0.00 0.00 38.69 3.97
2585 2637 1.153349 GACCATGAGGAGCGGGAAC 60.153 63.158 0.00 0.00 38.69 3.62
2586 2638 1.613630 ACCATGAGGAGCGGGAACT 60.614 57.895 0.00 0.00 38.69 3.01
2587 2639 1.144936 CCATGAGGAGCGGGAACTC 59.855 63.158 0.00 0.00 36.89 3.01
2588 2640 1.617018 CCATGAGGAGCGGGAACTCA 61.617 60.000 0.00 0.00 44.44 3.41
2589 2641 2.922162 ATGAGGAGCGGGAACTCAT 58.078 52.632 0.00 0.00 44.27 2.90
2590 2642 1.688735 CATGAGGAGCGGGAACTCATA 59.311 52.381 6.13 0.00 46.93 2.15
2591 2643 2.088104 TGAGGAGCGGGAACTCATAT 57.912 50.000 0.00 0.00 38.50 1.78
2592 2644 2.398588 TGAGGAGCGGGAACTCATATT 58.601 47.619 0.00 0.00 38.50 1.28
2593 2645 2.103094 TGAGGAGCGGGAACTCATATTG 59.897 50.000 0.00 0.00 38.50 1.90
2594 2646 2.103263 GAGGAGCGGGAACTCATATTGT 59.897 50.000 0.00 0.00 38.50 2.71
2595 2647 2.505819 AGGAGCGGGAACTCATATTGTT 59.494 45.455 0.00 0.00 38.50 2.83
2596 2648 2.614057 GGAGCGGGAACTCATATTGTTG 59.386 50.000 0.00 0.00 38.50 3.33
2597 2649 2.614057 GAGCGGGAACTCATATTGTTGG 59.386 50.000 0.00 0.00 36.65 3.77
2598 2650 2.238646 AGCGGGAACTCATATTGTTGGA 59.761 45.455 0.00 0.00 0.00 3.53
2599 2651 3.117888 AGCGGGAACTCATATTGTTGGAT 60.118 43.478 0.00 0.00 0.00 3.41
2600 2652 4.102524 AGCGGGAACTCATATTGTTGGATA 59.897 41.667 0.00 0.00 0.00 2.59
2601 2653 4.819630 GCGGGAACTCATATTGTTGGATAA 59.180 41.667 0.00 0.00 0.00 1.75
2602 2654 5.049405 GCGGGAACTCATATTGTTGGATAAG 60.049 44.000 0.00 0.00 0.00 1.73
2603 2655 6.055588 CGGGAACTCATATTGTTGGATAAGT 58.944 40.000 0.00 0.00 0.00 2.24
2604 2656 6.202954 CGGGAACTCATATTGTTGGATAAGTC 59.797 42.308 0.00 0.00 0.00 3.01
2605 2657 6.202954 GGGAACTCATATTGTTGGATAAGTCG 59.797 42.308 0.00 0.00 0.00 4.18
2606 2658 6.984474 GGAACTCATATTGTTGGATAAGTCGA 59.016 38.462 0.00 0.00 0.00 4.20
2607 2659 7.494625 GGAACTCATATTGTTGGATAAGTCGAA 59.505 37.037 0.00 0.00 0.00 3.71
2608 2660 8.786826 AACTCATATTGTTGGATAAGTCGAAA 57.213 30.769 0.00 0.00 0.00 3.46
2609 2661 8.425577 ACTCATATTGTTGGATAAGTCGAAAG 57.574 34.615 0.00 0.00 0.00 2.62
2610 2662 7.495934 ACTCATATTGTTGGATAAGTCGAAAGG 59.504 37.037 0.00 0.00 0.00 3.11
2611 2663 7.561251 TCATATTGTTGGATAAGTCGAAAGGA 58.439 34.615 0.00 0.00 0.00 3.36
2612 2664 7.710907 TCATATTGTTGGATAAGTCGAAAGGAG 59.289 37.037 0.00 0.00 0.00 3.69
2613 2665 5.477607 TTGTTGGATAAGTCGAAAGGAGA 57.522 39.130 0.00 0.00 0.00 3.71
2614 2666 5.477607 TGTTGGATAAGTCGAAAGGAGAA 57.522 39.130 0.00 0.00 0.00 2.87
2615 2667 6.049955 TGTTGGATAAGTCGAAAGGAGAAT 57.950 37.500 0.00 0.00 0.00 2.40
2616 2668 6.106673 TGTTGGATAAGTCGAAAGGAGAATC 58.893 40.000 0.00 0.00 0.00 2.52
2617 2669 5.932619 TGGATAAGTCGAAAGGAGAATCA 57.067 39.130 0.00 0.00 36.25 2.57
2618 2670 6.294361 TGGATAAGTCGAAAGGAGAATCAA 57.706 37.500 0.00 0.00 36.25 2.57
2619 2671 6.106673 TGGATAAGTCGAAAGGAGAATCAAC 58.893 40.000 0.00 0.00 36.25 3.18
2620 2672 6.106673 GGATAAGTCGAAAGGAGAATCAACA 58.893 40.000 0.00 0.00 36.25 3.33
2621 2673 6.036191 GGATAAGTCGAAAGGAGAATCAACAC 59.964 42.308 0.00 0.00 36.25 3.32
2622 2674 3.665190 AGTCGAAAGGAGAATCAACACC 58.335 45.455 0.00 0.00 36.25 4.16
2623 2675 2.412089 GTCGAAAGGAGAATCAACACCG 59.588 50.000 0.00 0.00 36.25 4.94
2624 2676 2.297880 TCGAAAGGAGAATCAACACCGA 59.702 45.455 0.00 0.00 36.25 4.69
2625 2677 2.668457 CGAAAGGAGAATCAACACCGAG 59.332 50.000 0.00 0.00 36.25 4.63
2626 2678 3.614150 CGAAAGGAGAATCAACACCGAGA 60.614 47.826 0.00 0.00 36.25 4.04
2627 2679 4.315803 GAAAGGAGAATCAACACCGAGAA 58.684 43.478 0.00 0.00 36.25 2.87
2628 2680 3.601443 AGGAGAATCAACACCGAGAAG 57.399 47.619 0.00 0.00 36.25 2.85
2629 2681 3.165875 AGGAGAATCAACACCGAGAAGA 58.834 45.455 0.00 0.00 36.25 2.87
2630 2682 3.056465 AGGAGAATCAACACCGAGAAGAC 60.056 47.826 0.00 0.00 36.25 3.01
2631 2683 2.917971 GAGAATCAACACCGAGAAGACG 59.082 50.000 0.00 0.00 33.17 4.18
2632 2684 2.557056 AGAATCAACACCGAGAAGACGA 59.443 45.455 0.00 0.00 35.09 4.20
2633 2685 3.005472 AGAATCAACACCGAGAAGACGAA 59.995 43.478 0.00 0.00 35.09 3.85
2634 2686 2.417339 TCAACACCGAGAAGACGAAG 57.583 50.000 0.00 0.00 35.09 3.79
2635 2687 1.951602 TCAACACCGAGAAGACGAAGA 59.048 47.619 0.00 0.00 35.09 2.87
2636 2688 2.031069 TCAACACCGAGAAGACGAAGAG 60.031 50.000 0.00 0.00 35.09 2.85
2637 2689 1.893544 ACACCGAGAAGACGAAGAGA 58.106 50.000 0.00 0.00 35.09 3.10
2638 2690 2.228059 ACACCGAGAAGACGAAGAGAA 58.772 47.619 0.00 0.00 35.09 2.87
2639 2691 2.226912 ACACCGAGAAGACGAAGAGAAG 59.773 50.000 0.00 0.00 35.09 2.85
2640 2692 2.484651 CACCGAGAAGACGAAGAGAAGA 59.515 50.000 0.00 0.00 35.09 2.87
2641 2693 3.058155 CACCGAGAAGACGAAGAGAAGAA 60.058 47.826 0.00 0.00 35.09 2.52
2642 2694 3.189702 ACCGAGAAGACGAAGAGAAGAAG 59.810 47.826 0.00 0.00 35.09 2.85
2643 2695 3.189702 CCGAGAAGACGAAGAGAAGAAGT 59.810 47.826 0.00 0.00 35.09 3.01
2644 2696 4.320641 CCGAGAAGACGAAGAGAAGAAGTT 60.321 45.833 0.00 0.00 35.09 2.66
2645 2697 4.615121 CGAGAAGACGAAGAGAAGAAGTTG 59.385 45.833 0.00 0.00 35.09 3.16
2646 2698 4.303282 AGAAGACGAAGAGAAGAAGTTGC 58.697 43.478 0.00 0.00 0.00 4.17
2647 2699 3.033368 AGACGAAGAGAAGAAGTTGCC 57.967 47.619 0.00 0.00 0.00 4.52
2648 2700 2.630580 AGACGAAGAGAAGAAGTTGCCT 59.369 45.455 0.00 0.00 0.00 4.75
2649 2701 2.734079 GACGAAGAGAAGAAGTTGCCTG 59.266 50.000 0.00 0.00 0.00 4.85
2650 2702 1.462670 CGAAGAGAAGAAGTTGCCTGC 59.537 52.381 0.00 0.00 0.00 4.85
2651 2703 2.777094 GAAGAGAAGAAGTTGCCTGCT 58.223 47.619 0.00 0.00 0.00 4.24
2652 2704 3.615110 CGAAGAGAAGAAGTTGCCTGCTA 60.615 47.826 0.00 0.00 0.00 3.49
2653 2705 3.326836 AGAGAAGAAGTTGCCTGCTAC 57.673 47.619 0.00 0.00 0.00 3.58
2654 2706 2.027653 AGAGAAGAAGTTGCCTGCTACC 60.028 50.000 0.13 0.00 0.00 3.18
2655 2707 1.003696 AGAAGAAGTTGCCTGCTACCC 59.996 52.381 0.13 0.00 0.00 3.69
2656 2708 1.003696 GAAGAAGTTGCCTGCTACCCT 59.996 52.381 0.13 0.00 0.00 4.34
2657 2709 0.326264 AGAAGTTGCCTGCTACCCTG 59.674 55.000 0.13 0.00 0.00 4.45
2658 2710 1.303643 AAGTTGCCTGCTACCCTGC 60.304 57.895 0.13 0.00 0.00 4.85
2659 2711 3.127533 GTTGCCTGCTACCCTGCG 61.128 66.667 0.00 0.00 35.36 5.18
2660 2712 3.318384 TTGCCTGCTACCCTGCGA 61.318 61.111 0.00 0.00 35.36 5.10
2661 2713 2.669133 TTGCCTGCTACCCTGCGAT 61.669 57.895 0.00 0.00 35.36 4.58
2662 2714 2.280457 GCCTGCTACCCTGCGATC 60.280 66.667 0.00 0.00 35.36 3.69
2663 2715 3.094062 GCCTGCTACCCTGCGATCA 62.094 63.158 0.00 0.00 35.36 2.92
2664 2716 1.227380 CCTGCTACCCTGCGATCAC 60.227 63.158 0.00 0.00 35.36 3.06
2665 2717 1.680522 CCTGCTACCCTGCGATCACT 61.681 60.000 0.00 0.00 35.36 3.41
2666 2718 0.249238 CTGCTACCCTGCGATCACTC 60.249 60.000 0.00 0.00 35.36 3.51
2668 2720 1.360551 CTACCCTGCGATCACTCGG 59.639 63.158 0.00 0.00 45.15 4.63
2669 2721 2.685387 CTACCCTGCGATCACTCGGC 62.685 65.000 0.00 0.00 45.15 5.54
2670 2722 4.147449 CCCTGCGATCACTCGGCA 62.147 66.667 0.00 0.00 45.15 5.69
2671 2723 2.887568 CCTGCGATCACTCGGCAC 60.888 66.667 0.00 0.00 45.15 5.01
2672 2724 2.887568 CTGCGATCACTCGGCACC 60.888 66.667 0.00 0.00 45.15 5.01
2673 2725 3.362399 CTGCGATCACTCGGCACCT 62.362 63.158 0.00 0.00 45.15 4.00
2674 2726 2.125512 GCGATCACTCGGCACCTT 60.126 61.111 0.00 0.00 45.15 3.50
2675 2727 2.456119 GCGATCACTCGGCACCTTG 61.456 63.158 0.00 0.00 45.15 3.61
2676 2728 1.215382 CGATCACTCGGCACCTTGA 59.785 57.895 0.00 0.00 41.27 3.02
2677 2729 0.389817 CGATCACTCGGCACCTTGAA 60.390 55.000 0.00 0.00 41.27 2.69
2678 2730 1.363744 GATCACTCGGCACCTTGAAG 58.636 55.000 0.00 0.00 0.00 3.02
2679 2731 0.976641 ATCACTCGGCACCTTGAAGA 59.023 50.000 0.00 0.00 0.00 2.87
2680 2732 0.318441 TCACTCGGCACCTTGAAGAG 59.682 55.000 0.00 0.00 35.28 2.85
2681 2733 1.004440 ACTCGGCACCTTGAAGAGC 60.004 57.895 0.00 0.00 32.60 4.09
2682 2734 1.294780 CTCGGCACCTTGAAGAGCT 59.705 57.895 8.93 0.00 0.00 4.09
2683 2735 0.532573 CTCGGCACCTTGAAGAGCTA 59.467 55.000 8.93 0.00 0.00 3.32
2684 2736 0.532573 TCGGCACCTTGAAGAGCTAG 59.467 55.000 8.93 5.04 0.00 3.42
2685 2737 0.460987 CGGCACCTTGAAGAGCTAGG 60.461 60.000 8.93 0.00 44.02 3.02
2686 2738 0.905357 GGCACCTTGAAGAGCTAGGA 59.095 55.000 6.48 0.00 41.40 2.94
2687 2739 1.134551 GGCACCTTGAAGAGCTAGGAG 60.135 57.143 6.48 0.00 41.40 3.69
2688 2740 1.827969 GCACCTTGAAGAGCTAGGAGA 59.172 52.381 6.48 0.00 41.40 3.71
2689 2741 2.159114 GCACCTTGAAGAGCTAGGAGAG 60.159 54.545 6.48 0.00 41.40 3.20
2690 2742 3.096092 CACCTTGAAGAGCTAGGAGAGT 58.904 50.000 6.48 0.00 41.40 3.24
2691 2743 3.130340 CACCTTGAAGAGCTAGGAGAGTC 59.870 52.174 6.48 0.00 41.40 3.36
2692 2744 3.245443 ACCTTGAAGAGCTAGGAGAGTCA 60.245 47.826 6.48 0.00 41.40 3.41
2693 2745 3.130340 CCTTGAAGAGCTAGGAGAGTCAC 59.870 52.174 0.00 0.00 41.40 3.67
2694 2746 3.441500 TGAAGAGCTAGGAGAGTCACA 57.558 47.619 0.00 0.00 0.00 3.58
2695 2747 3.351740 TGAAGAGCTAGGAGAGTCACAG 58.648 50.000 0.00 0.00 0.00 3.66
2696 2748 1.762708 AGAGCTAGGAGAGTCACAGC 58.237 55.000 0.00 0.00 0.00 4.40
2697 2749 0.744281 GAGCTAGGAGAGTCACAGCC 59.256 60.000 0.00 0.00 32.58 4.85
2698 2750 0.040351 AGCTAGGAGAGTCACAGCCA 59.960 55.000 0.00 0.00 32.58 4.75
2699 2751 0.174617 GCTAGGAGAGTCACAGCCAC 59.825 60.000 0.00 0.00 0.00 5.01
2700 2752 0.820871 CTAGGAGAGTCACAGCCACC 59.179 60.000 0.00 0.00 0.00 4.61
2701 2753 0.965866 TAGGAGAGTCACAGCCACCG 60.966 60.000 0.00 0.00 0.00 4.94
2702 2754 2.574955 GGAGAGTCACAGCCACCGT 61.575 63.158 0.00 0.00 0.00 4.83
2703 2755 1.080434 GAGAGTCACAGCCACCGTC 60.080 63.158 0.00 0.00 0.00 4.79
2704 2756 2.430921 GAGTCACAGCCACCGTCG 60.431 66.667 0.00 0.00 0.00 5.12
2705 2757 2.910479 AGTCACAGCCACCGTCGA 60.910 61.111 0.00 0.00 0.00 4.20
2706 2758 2.028484 GTCACAGCCACCGTCGAA 59.972 61.111 0.00 0.00 0.00 3.71
2707 2759 2.022129 GTCACAGCCACCGTCGAAG 61.022 63.158 0.00 0.00 0.00 3.79
2708 2760 2.738521 CACAGCCACCGTCGAAGG 60.739 66.667 16.38 16.38 37.30 3.46
2709 2761 4.003788 ACAGCCACCGTCGAAGGG 62.004 66.667 21.73 12.10 35.02 3.95
2712 2764 4.699522 GCCACCGTCGAAGGGCTT 62.700 66.667 21.73 0.00 43.09 4.35
2713 2765 2.434359 CCACCGTCGAAGGGCTTC 60.434 66.667 21.73 0.00 36.29 3.86
2714 2766 2.657237 CACCGTCGAAGGGCTTCT 59.343 61.111 21.73 0.00 37.44 2.85
2715 2767 1.446272 CACCGTCGAAGGGCTTCTC 60.446 63.158 21.73 0.00 37.44 2.87
2716 2768 1.906824 ACCGTCGAAGGGCTTCTCA 60.907 57.895 21.73 0.00 37.44 3.27
2717 2769 1.292223 CCGTCGAAGGGCTTCTCAA 59.708 57.895 9.83 0.00 37.44 3.02
2718 2770 0.108138 CCGTCGAAGGGCTTCTCAAT 60.108 55.000 9.83 0.00 37.44 2.57
2719 2771 1.002366 CGTCGAAGGGCTTCTCAATG 58.998 55.000 0.00 0.00 37.44 2.82
2720 2772 0.729690 GTCGAAGGGCTTCTCAATGC 59.270 55.000 0.00 0.00 37.44 3.56
2727 2779 2.698855 GGCTTCTCAATGCCTAGTCA 57.301 50.000 0.00 0.00 45.26 3.41
2728 2780 2.284190 GGCTTCTCAATGCCTAGTCAC 58.716 52.381 0.00 0.00 45.26 3.67
2729 2781 1.929836 GCTTCTCAATGCCTAGTCACG 59.070 52.381 0.00 0.00 0.00 4.35
2730 2782 2.417379 GCTTCTCAATGCCTAGTCACGA 60.417 50.000 0.00 0.00 0.00 4.35
2731 2783 2.941453 TCTCAATGCCTAGTCACGAC 57.059 50.000 0.00 0.00 0.00 4.34
2732 2784 1.132453 TCTCAATGCCTAGTCACGACG 59.868 52.381 0.00 0.00 36.20 5.12
2733 2785 0.457853 TCAATGCCTAGTCACGACGC 60.458 55.000 0.00 0.00 36.20 5.19
2734 2786 1.516386 AATGCCTAGTCACGACGCG 60.516 57.895 3.53 3.53 36.20 6.01
2735 2787 2.884087 AATGCCTAGTCACGACGCGG 62.884 60.000 12.47 0.00 36.20 6.46
2752 2804 2.183046 GCGGAGAGAGCCACAGAC 59.817 66.667 0.00 0.00 0.00 3.51
2753 2805 2.888863 CGGAGAGAGCCACAGACC 59.111 66.667 0.00 0.00 0.00 3.85
2754 2806 1.979155 CGGAGAGAGCCACAGACCA 60.979 63.158 0.00 0.00 0.00 4.02
2755 2807 1.326213 CGGAGAGAGCCACAGACCAT 61.326 60.000 0.00 0.00 0.00 3.55
2756 2808 0.177604 GGAGAGAGCCACAGACCATG 59.822 60.000 0.00 0.00 0.00 3.66
2757 2809 1.189752 GAGAGAGCCACAGACCATGA 58.810 55.000 0.00 0.00 0.00 3.07
2758 2810 0.901124 AGAGAGCCACAGACCATGAC 59.099 55.000 0.00 0.00 0.00 3.06
2759 2811 0.459237 GAGAGCCACAGACCATGACG 60.459 60.000 0.00 0.00 0.00 4.35
2760 2812 0.900182 AGAGCCACAGACCATGACGA 60.900 55.000 0.00 0.00 0.00 4.20
2761 2813 0.037326 GAGCCACAGACCATGACGAA 60.037 55.000 0.00 0.00 0.00 3.85
2762 2814 0.036952 AGCCACAGACCATGACGAAG 60.037 55.000 0.00 0.00 0.00 3.79
2763 2815 1.021390 GCCACAGACCATGACGAAGG 61.021 60.000 0.00 0.00 0.00 3.46
2764 2816 0.391661 CCACAGACCATGACGAAGGG 60.392 60.000 0.00 0.00 0.00 3.95
2765 2817 1.021390 CACAGACCATGACGAAGGGC 61.021 60.000 0.00 0.00 0.00 5.19
2766 2818 1.296392 CAGACCATGACGAAGGGCA 59.704 57.895 0.00 0.00 34.45 5.36
2767 2819 0.321564 CAGACCATGACGAAGGGCAA 60.322 55.000 0.00 0.00 34.45 4.52
2768 2820 0.321653 AGACCATGACGAAGGGCAAC 60.322 55.000 0.00 0.00 34.45 4.17
2769 2821 1.635663 GACCATGACGAAGGGCAACG 61.636 60.000 0.00 0.00 31.39 4.10
2770 2822 1.671054 CCATGACGAAGGGCAACGT 60.671 57.895 0.00 0.00 45.32 3.99
2781 2833 3.774702 GCAACGTTCCGCCGAGAC 61.775 66.667 0.00 0.00 0.00 3.36
2782 2834 2.355363 CAACGTTCCGCCGAGACA 60.355 61.111 0.00 0.00 0.00 3.41
2783 2835 2.049433 AACGTTCCGCCGAGACAG 60.049 61.111 0.00 0.00 0.00 3.51
2784 2836 4.719369 ACGTTCCGCCGAGACAGC 62.719 66.667 0.00 0.00 0.00 4.40
2792 2844 4.394712 CCGAGACAGCCCCACACC 62.395 72.222 0.00 0.00 0.00 4.16
2793 2845 3.314331 CGAGACAGCCCCACACCT 61.314 66.667 0.00 0.00 0.00 4.00
2794 2846 2.665603 GAGACAGCCCCACACCTC 59.334 66.667 0.00 0.00 0.00 3.85
2795 2847 2.930562 AGACAGCCCCACACCTCC 60.931 66.667 0.00 0.00 0.00 4.30
2796 2848 2.930562 GACAGCCCCACACCTCCT 60.931 66.667 0.00 0.00 0.00 3.69
2797 2849 2.930562 ACAGCCCCACACCTCCTC 60.931 66.667 0.00 0.00 0.00 3.71
2798 2850 2.608988 CAGCCCCACACCTCCTCT 60.609 66.667 0.00 0.00 0.00 3.69
2799 2851 2.608988 AGCCCCACACCTCCTCTG 60.609 66.667 0.00 0.00 0.00 3.35
2800 2852 3.721706 GCCCCACACCTCCTCTGG 61.722 72.222 0.00 0.00 0.00 3.86
2801 2853 3.011517 CCCCACACCTCCTCTGGG 61.012 72.222 0.00 0.00 44.03 4.45
2802 2854 3.721706 CCCACACCTCCTCTGGGC 61.722 72.222 0.00 0.00 38.42 5.36
2803 2855 3.721706 CCACACCTCCTCTGGGCC 61.722 72.222 0.00 0.00 0.00 5.80
2804 2856 2.930019 CACACCTCCTCTGGGCCA 60.930 66.667 5.85 5.85 0.00 5.36
2805 2857 2.930562 ACACCTCCTCTGGGCCAC 60.931 66.667 0.00 0.00 0.00 5.01
2806 2858 2.930019 CACCTCCTCTGGGCCACA 60.930 66.667 0.00 0.00 0.00 4.17
2807 2859 2.930562 ACCTCCTCTGGGCCACAC 60.931 66.667 0.00 0.00 0.00 3.82
2808 2860 3.721706 CCTCCTCTGGGCCACACC 61.722 72.222 0.00 0.00 37.93 4.16
2809 2861 2.930019 CTCCTCTGGGCCACACCA 60.930 66.667 0.00 0.00 42.05 4.17
2810 2862 3.249189 TCCTCTGGGCCACACCAC 61.249 66.667 0.00 0.00 42.05 4.16
2811 2863 4.704833 CCTCTGGGCCACACCACG 62.705 72.222 0.00 0.00 42.05 4.94
2812 2864 3.625897 CTCTGGGCCACACCACGA 61.626 66.667 0.00 0.00 42.05 4.35
2813 2865 3.883744 CTCTGGGCCACACCACGAC 62.884 68.421 0.00 0.00 42.05 4.34
2818 2870 4.555709 GCCACACCACGACCACCA 62.556 66.667 0.00 0.00 0.00 4.17
2819 2871 2.429930 CCACACCACGACCACCAT 59.570 61.111 0.00 0.00 0.00 3.55
2820 2872 1.671054 CCACACCACGACCACCATC 60.671 63.158 0.00 0.00 0.00 3.51
2821 2873 1.070615 CACACCACGACCACCATCA 59.929 57.895 0.00 0.00 0.00 3.07
2822 2874 1.070786 ACACCACGACCACCATCAC 59.929 57.895 0.00 0.00 0.00 3.06
2823 2875 1.070615 CACCACGACCACCATCACA 59.929 57.895 0.00 0.00 0.00 3.58
2824 2876 0.533978 CACCACGACCACCATCACAA 60.534 55.000 0.00 0.00 0.00 3.33
2825 2877 0.181587 ACCACGACCACCATCACAAA 59.818 50.000 0.00 0.00 0.00 2.83
2826 2878 1.202879 ACCACGACCACCATCACAAAT 60.203 47.619 0.00 0.00 0.00 2.32
2827 2879 2.039216 ACCACGACCACCATCACAAATA 59.961 45.455 0.00 0.00 0.00 1.40
2828 2880 2.677836 CCACGACCACCATCACAAATAG 59.322 50.000 0.00 0.00 0.00 1.73
2829 2881 3.595173 CACGACCACCATCACAAATAGA 58.405 45.455 0.00 0.00 0.00 1.98
2830 2882 3.618594 CACGACCACCATCACAAATAGAG 59.381 47.826 0.00 0.00 0.00 2.43
2831 2883 3.198068 CGACCACCATCACAAATAGAGG 58.802 50.000 0.00 0.00 0.00 3.69
2832 2884 3.545703 GACCACCATCACAAATAGAGGG 58.454 50.000 0.00 0.00 42.39 4.30
2833 2885 3.189606 ACCACCATCACAAATAGAGGGA 58.810 45.455 0.49 0.00 39.20 4.20
2834 2886 3.591527 ACCACCATCACAAATAGAGGGAA 59.408 43.478 0.49 0.00 39.20 3.97
2835 2887 3.947834 CCACCATCACAAATAGAGGGAAC 59.052 47.826 0.49 0.00 39.20 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.278336 CTTCGCCGATTCCGCGTA 60.278 61.111 16.79 8.51 36.92 4.42
69 70 3.233355 GGCATTGACCTTGACGACT 57.767 52.632 0.00 0.00 0.00 4.18
146 147 3.839432 CCTCCTTCTCGTCGGCCC 61.839 72.222 0.00 0.00 0.00 5.80
367 372 2.029964 GAACAAGCCCACGTCCGA 59.970 61.111 0.00 0.00 0.00 4.55
410 415 0.167470 GACGTTGAGGTCGATGACGA 59.833 55.000 13.23 0.00 46.56 4.20
566 571 1.626825 TGTACTGGTTGTAGAAGGGGC 59.373 52.381 0.00 0.00 0.00 5.80
688 694 0.516001 GTCGTAGTCAGCACAGTCGA 59.484 55.000 0.00 0.00 0.00 4.20
842 860 2.485814 GTGCGAATGCTCTTCCTCTTTT 59.514 45.455 0.00 0.00 43.34 2.27
843 861 2.079925 GTGCGAATGCTCTTCCTCTTT 58.920 47.619 0.00 0.00 43.34 2.52
1083 1101 4.257731 TCTCAAATGCGGCACAATACTTA 58.742 39.130 4.03 0.00 0.00 2.24
1194 1213 0.249741 ACCATATACACGGCCGAAGC 60.250 55.000 35.90 0.00 38.76 3.86
1212 1231 4.031652 GTCAACAACAAGTGAACATGCAAC 59.968 41.667 0.00 0.00 0.00 4.17
1235 1254 2.445427 TGAAATGCCTACACCACATGG 58.555 47.619 0.00 0.00 42.17 3.66
1280 1299 3.225104 AGTGAATGGCTTGTCATTGTGT 58.775 40.909 5.11 0.00 37.47 3.72
1285 1305 3.935203 CGTAAGAGTGAATGGCTTGTCAT 59.065 43.478 0.00 0.00 43.02 3.06
1535 1556 1.971481 TGCTTTGCTGCTTCTTCTCA 58.029 45.000 0.00 0.00 0.00 3.27
1546 1567 0.819259 TTGCTCGTCCTTGCTTTGCT 60.819 50.000 0.00 0.00 0.00 3.91
1567 1589 4.386867 TGAAGGTCTAGGTATTGCTTCG 57.613 45.455 0.00 0.00 0.00 3.79
1664 1686 2.418910 CGCCTCCTCCATGTCGAGT 61.419 63.158 0.00 0.00 0.00 4.18
1769 1791 1.603739 GGCCACCTCCTTCGCTTTT 60.604 57.895 0.00 0.00 0.00 2.27
1813 1835 1.539827 TCGTCTTGTCGCTCATCTTCA 59.460 47.619 0.00 0.00 0.00 3.02
1980 2008 0.107017 CCGGCCTCCAGAATGAATGT 60.107 55.000 0.00 0.00 39.69 2.71
2222 2269 3.716195 CCTGGGATGCGGTGGACA 61.716 66.667 0.00 0.00 0.00 4.02
2224 2271 3.399181 GTCCTGGGATGCGGTGGA 61.399 66.667 0.00 0.00 0.00 4.02
2262 2309 0.249741 CTATCCGTTTGGGTAGGGCG 60.250 60.000 0.00 0.00 44.12 6.13
2300 2347 2.828549 GCGCGACCCCAAATGGAT 60.829 61.111 12.10 0.00 37.39 3.41
2335 2387 2.800881 ACATCATTCAGAGCGCGATA 57.199 45.000 12.10 0.00 0.00 2.92
2339 2391 3.687572 ATCAAACATCATTCAGAGCGC 57.312 42.857 0.00 0.00 0.00 5.92
2340 2392 6.779117 AGTTAATCAAACATCATTCAGAGCG 58.221 36.000 0.00 0.00 40.83 5.03
2341 2393 8.976986 AAAGTTAATCAAACATCATTCAGAGC 57.023 30.769 0.00 0.00 40.83 4.09
2368 2420 2.083774 CCGCCATAGCTCTGTCAAAAA 58.916 47.619 0.00 0.00 36.60 1.94
2369 2421 1.678728 CCCGCCATAGCTCTGTCAAAA 60.679 52.381 0.00 0.00 36.60 2.44
2370 2422 0.107703 CCCGCCATAGCTCTGTCAAA 60.108 55.000 0.00 0.00 36.60 2.69
2371 2423 1.522092 CCCGCCATAGCTCTGTCAA 59.478 57.895 0.00 0.00 36.60 3.18
2372 2424 3.094062 GCCCGCCATAGCTCTGTCA 62.094 63.158 0.00 0.00 36.60 3.58
2373 2425 2.280457 GCCCGCCATAGCTCTGTC 60.280 66.667 0.00 0.00 36.60 3.51
2374 2426 1.048724 TAAGCCCGCCATAGCTCTGT 61.049 55.000 0.00 0.00 38.74 3.41
2375 2427 0.601311 GTAAGCCCGCCATAGCTCTG 60.601 60.000 0.00 0.00 38.74 3.35
2376 2428 1.749033 GTAAGCCCGCCATAGCTCT 59.251 57.895 0.00 0.00 38.74 4.09
2377 2429 1.664965 CGTAAGCCCGCCATAGCTC 60.665 63.158 0.00 0.00 38.74 4.09
2378 2430 2.421739 CGTAAGCCCGCCATAGCT 59.578 61.111 0.00 0.00 42.40 3.32
2390 2442 2.818274 GGTTCAGGCCGGCGTAAG 60.818 66.667 23.15 10.93 43.44 2.34
2391 2443 2.472414 AATGGTTCAGGCCGGCGTAA 62.472 55.000 23.15 12.08 0.00 3.18
2392 2444 2.472414 AAATGGTTCAGGCCGGCGTA 62.472 55.000 23.15 6.11 0.00 4.42
2393 2445 3.860930 AAATGGTTCAGGCCGGCGT 62.861 57.895 22.54 20.09 0.00 5.68
2394 2446 2.542211 GAAAATGGTTCAGGCCGGCG 62.542 60.000 22.54 7.85 0.00 6.46
2395 2447 1.215382 GAAAATGGTTCAGGCCGGC 59.785 57.895 21.18 21.18 0.00 6.13
2396 2448 1.185315 ATGAAAATGGTTCAGGCCGG 58.815 50.000 0.00 0.00 0.00 6.13
2397 2449 4.097741 TGATAATGAAAATGGTTCAGGCCG 59.902 41.667 0.00 0.00 0.00 6.13
2398 2450 5.596836 TGATAATGAAAATGGTTCAGGCC 57.403 39.130 0.00 0.00 0.00 5.19
2399 2451 8.416329 ACTTATGATAATGAAAATGGTTCAGGC 58.584 33.333 0.00 0.00 0.00 4.85
2418 2470 9.856488 GTGTTTGTATCTCAGTCTTACTTATGA 57.144 33.333 0.00 0.00 0.00 2.15
2419 2471 9.639601 TGTGTTTGTATCTCAGTCTTACTTATG 57.360 33.333 0.00 0.00 0.00 1.90
2421 2473 9.472361 GTTGTGTTTGTATCTCAGTCTTACTTA 57.528 33.333 0.00 0.00 0.00 2.24
2422 2474 7.169308 CGTTGTGTTTGTATCTCAGTCTTACTT 59.831 37.037 0.00 0.00 0.00 2.24
2423 2475 6.641314 CGTTGTGTTTGTATCTCAGTCTTACT 59.359 38.462 0.00 0.00 0.00 2.24
2424 2476 6.128902 CCGTTGTGTTTGTATCTCAGTCTTAC 60.129 42.308 0.00 0.00 0.00 2.34
2425 2477 5.924254 CCGTTGTGTTTGTATCTCAGTCTTA 59.076 40.000 0.00 0.00 0.00 2.10
2426 2478 4.750098 CCGTTGTGTTTGTATCTCAGTCTT 59.250 41.667 0.00 0.00 0.00 3.01
2427 2479 4.307432 CCGTTGTGTTTGTATCTCAGTCT 58.693 43.478 0.00 0.00 0.00 3.24
2428 2480 3.120649 GCCGTTGTGTTTGTATCTCAGTC 60.121 47.826 0.00 0.00 0.00 3.51
2429 2481 2.806244 GCCGTTGTGTTTGTATCTCAGT 59.194 45.455 0.00 0.00 0.00 3.41
2430 2482 3.067106 AGCCGTTGTGTTTGTATCTCAG 58.933 45.455 0.00 0.00 0.00 3.35
2431 2483 3.120321 AGCCGTTGTGTTTGTATCTCA 57.880 42.857 0.00 0.00 0.00 3.27
2432 2484 3.991773 TGTAGCCGTTGTGTTTGTATCTC 59.008 43.478 0.00 0.00 0.00 2.75
2433 2485 3.744426 GTGTAGCCGTTGTGTTTGTATCT 59.256 43.478 0.00 0.00 0.00 1.98
2434 2486 3.495377 TGTGTAGCCGTTGTGTTTGTATC 59.505 43.478 0.00 0.00 0.00 2.24
2435 2487 3.468770 TGTGTAGCCGTTGTGTTTGTAT 58.531 40.909 0.00 0.00 0.00 2.29
2436 2488 2.902523 TGTGTAGCCGTTGTGTTTGTA 58.097 42.857 0.00 0.00 0.00 2.41
2437 2489 1.740297 TGTGTAGCCGTTGTGTTTGT 58.260 45.000 0.00 0.00 0.00 2.83
2438 2490 2.096819 ACTTGTGTAGCCGTTGTGTTTG 59.903 45.455 0.00 0.00 0.00 2.93
2439 2491 2.096819 CACTTGTGTAGCCGTTGTGTTT 59.903 45.455 0.00 0.00 0.00 2.83
2440 2492 1.668751 CACTTGTGTAGCCGTTGTGTT 59.331 47.619 0.00 0.00 0.00 3.32
2441 2493 1.295792 CACTTGTGTAGCCGTTGTGT 58.704 50.000 0.00 0.00 0.00 3.72
2442 2494 0.041312 GCACTTGTGTAGCCGTTGTG 60.041 55.000 2.61 0.00 0.00 3.33
2443 2495 0.462937 TGCACTTGTGTAGCCGTTGT 60.463 50.000 2.61 0.00 0.00 3.32
2444 2496 0.235665 CTGCACTTGTGTAGCCGTTG 59.764 55.000 5.97 0.00 0.00 4.10
2445 2497 1.507141 GCTGCACTTGTGTAGCCGTT 61.507 55.000 25.86 0.00 40.80 4.44
2446 2498 1.961277 GCTGCACTTGTGTAGCCGT 60.961 57.895 25.86 0.00 40.80 5.68
2447 2499 1.960763 TGCTGCACTTGTGTAGCCG 60.961 57.895 30.33 6.76 44.98 5.52
2448 2500 1.576421 GTGCTGCACTTGTGTAGCC 59.424 57.895 30.33 21.35 44.98 3.93
2449 2501 1.576421 GGTGCTGCACTTGTGTAGC 59.424 57.895 29.54 28.19 45.62 3.58
2450 2502 0.534877 TGGGTGCTGCACTTGTGTAG 60.535 55.000 29.54 13.22 34.40 2.74
2451 2503 0.106967 TTGGGTGCTGCACTTGTGTA 60.107 50.000 29.54 9.33 34.40 2.90
2452 2504 1.379710 TTGGGTGCTGCACTTGTGT 60.380 52.632 29.54 0.00 34.40 3.72
2453 2505 1.066257 GTTGGGTGCTGCACTTGTG 59.934 57.895 29.54 0.00 34.40 3.33
2454 2506 1.379710 TGTTGGGTGCTGCACTTGT 60.380 52.632 29.54 0.00 34.40 3.16
2455 2507 1.066257 GTGTTGGGTGCTGCACTTG 59.934 57.895 29.54 0.00 34.40 3.16
2456 2508 0.756442 ATGTGTTGGGTGCTGCACTT 60.756 50.000 29.54 0.01 34.40 3.16
2457 2509 0.110295 TATGTGTTGGGTGCTGCACT 59.890 50.000 29.54 11.85 34.40 4.40
2458 2510 0.523072 CTATGTGTTGGGTGCTGCAC 59.477 55.000 24.02 24.02 0.00 4.57
2459 2511 0.399833 TCTATGTGTTGGGTGCTGCA 59.600 50.000 0.00 0.00 0.00 4.41
2460 2512 1.470098 CTTCTATGTGTTGGGTGCTGC 59.530 52.381 0.00 0.00 0.00 5.25
2461 2513 3.057969 TCTTCTATGTGTTGGGTGCTG 57.942 47.619 0.00 0.00 0.00 4.41
2462 2514 3.560025 CCTTCTTCTATGTGTTGGGTGCT 60.560 47.826 0.00 0.00 0.00 4.40
2463 2515 2.749621 CCTTCTTCTATGTGTTGGGTGC 59.250 50.000 0.00 0.00 0.00 5.01
2464 2516 4.286297 TCCTTCTTCTATGTGTTGGGTG 57.714 45.455 0.00 0.00 0.00 4.61
2465 2517 4.993705 TTCCTTCTTCTATGTGTTGGGT 57.006 40.909 0.00 0.00 0.00 4.51
2466 2518 4.096984 GCATTCCTTCTTCTATGTGTTGGG 59.903 45.833 0.00 0.00 0.00 4.12
2467 2519 4.201851 CGCATTCCTTCTTCTATGTGTTGG 60.202 45.833 0.00 0.00 0.00 3.77
2468 2520 4.201851 CCGCATTCCTTCTTCTATGTGTTG 60.202 45.833 0.00 0.00 0.00 3.33
2469 2521 3.941483 CCGCATTCCTTCTTCTATGTGTT 59.059 43.478 0.00 0.00 0.00 3.32
2470 2522 3.055094 ACCGCATTCCTTCTTCTATGTGT 60.055 43.478 0.00 0.00 0.00 3.72
2471 2523 3.535561 ACCGCATTCCTTCTTCTATGTG 58.464 45.455 0.00 0.00 0.00 3.21
2472 2524 3.914426 ACCGCATTCCTTCTTCTATGT 57.086 42.857 0.00 0.00 0.00 2.29
2473 2525 4.693283 TGTACCGCATTCCTTCTTCTATG 58.307 43.478 0.00 0.00 0.00 2.23
2474 2526 5.116882 GTTGTACCGCATTCCTTCTTCTAT 58.883 41.667 0.00 0.00 0.00 1.98
2475 2527 4.020928 TGTTGTACCGCATTCCTTCTTCTA 60.021 41.667 0.00 0.00 0.00 2.10
2476 2528 3.244422 TGTTGTACCGCATTCCTTCTTCT 60.244 43.478 0.00 0.00 0.00 2.85
2477 2529 3.071479 TGTTGTACCGCATTCCTTCTTC 58.929 45.455 0.00 0.00 0.00 2.87
2478 2530 3.134574 TGTTGTACCGCATTCCTTCTT 57.865 42.857 0.00 0.00 0.00 2.52
2479 2531 2.851263 TGTTGTACCGCATTCCTTCT 57.149 45.000 0.00 0.00 0.00 2.85
2480 2532 3.500680 TCTTTGTTGTACCGCATTCCTTC 59.499 43.478 0.00 0.00 0.00 3.46
2481 2533 3.482436 TCTTTGTTGTACCGCATTCCTT 58.518 40.909 0.00 0.00 0.00 3.36
2482 2534 3.134574 TCTTTGTTGTACCGCATTCCT 57.865 42.857 0.00 0.00 0.00 3.36
2483 2535 3.500680 TCTTCTTTGTTGTACCGCATTCC 59.499 43.478 0.00 0.00 0.00 3.01
2484 2536 4.742438 TCTTCTTTGTTGTACCGCATTC 57.258 40.909 0.00 0.00 0.00 2.67
2485 2537 4.261447 GGTTCTTCTTTGTTGTACCGCATT 60.261 41.667 0.00 0.00 0.00 3.56
2486 2538 3.252458 GGTTCTTCTTTGTTGTACCGCAT 59.748 43.478 0.00 0.00 0.00 4.73
2487 2539 2.614983 GGTTCTTCTTTGTTGTACCGCA 59.385 45.455 0.00 0.00 0.00 5.69
2488 2540 2.614983 TGGTTCTTCTTTGTTGTACCGC 59.385 45.455 0.00 0.00 0.00 5.68
2489 2541 3.250040 CCTGGTTCTTCTTTGTTGTACCG 59.750 47.826 0.00 0.00 0.00 4.02
2490 2542 4.457466 TCCTGGTTCTTCTTTGTTGTACC 58.543 43.478 0.00 0.00 0.00 3.34
2491 2543 6.445357 TTTCCTGGTTCTTCTTTGTTGTAC 57.555 37.500 0.00 0.00 0.00 2.90
2492 2544 6.831353 TCATTTCCTGGTTCTTCTTTGTTGTA 59.169 34.615 0.00 0.00 0.00 2.41
2493 2545 5.656416 TCATTTCCTGGTTCTTCTTTGTTGT 59.344 36.000 0.00 0.00 0.00 3.32
2494 2546 6.039717 TCTCATTTCCTGGTTCTTCTTTGTTG 59.960 38.462 0.00 0.00 0.00 3.33
2495 2547 6.129179 TCTCATTTCCTGGTTCTTCTTTGTT 58.871 36.000 0.00 0.00 0.00 2.83
2496 2548 5.694995 TCTCATTTCCTGGTTCTTCTTTGT 58.305 37.500 0.00 0.00 0.00 2.83
2497 2549 6.830873 ATCTCATTTCCTGGTTCTTCTTTG 57.169 37.500 0.00 0.00 0.00 2.77
2498 2550 8.797438 GTTTATCTCATTTCCTGGTTCTTCTTT 58.203 33.333 0.00 0.00 0.00 2.52
2499 2551 7.944554 TGTTTATCTCATTTCCTGGTTCTTCTT 59.055 33.333 0.00 0.00 0.00 2.52
2500 2552 7.461749 TGTTTATCTCATTTCCTGGTTCTTCT 58.538 34.615 0.00 0.00 0.00 2.85
2501 2553 7.687941 TGTTTATCTCATTTCCTGGTTCTTC 57.312 36.000 0.00 0.00 0.00 2.87
2502 2554 8.360390 GTTTGTTTATCTCATTTCCTGGTTCTT 58.640 33.333 0.00 0.00 0.00 2.52
2503 2555 7.505585 TGTTTGTTTATCTCATTTCCTGGTTCT 59.494 33.333 0.00 0.00 0.00 3.01
2504 2556 7.657336 TGTTTGTTTATCTCATTTCCTGGTTC 58.343 34.615 0.00 0.00 0.00 3.62
2505 2557 7.595819 TGTTTGTTTATCTCATTTCCTGGTT 57.404 32.000 0.00 0.00 0.00 3.67
2506 2558 6.294731 GCTGTTTGTTTATCTCATTTCCTGGT 60.295 38.462 0.00 0.00 0.00 4.00
2507 2559 6.095377 GCTGTTTGTTTATCTCATTTCCTGG 58.905 40.000 0.00 0.00 0.00 4.45
2508 2560 6.095377 GGCTGTTTGTTTATCTCATTTCCTG 58.905 40.000 0.00 0.00 0.00 3.86
2509 2561 5.106157 CGGCTGTTTGTTTATCTCATTTCCT 60.106 40.000 0.00 0.00 0.00 3.36
2510 2562 5.095490 CGGCTGTTTGTTTATCTCATTTCC 58.905 41.667 0.00 0.00 0.00 3.13
2511 2563 5.795441 GTCGGCTGTTTGTTTATCTCATTTC 59.205 40.000 0.00 0.00 0.00 2.17
2512 2564 5.240623 TGTCGGCTGTTTGTTTATCTCATTT 59.759 36.000 0.00 0.00 0.00 2.32
2513 2565 4.759693 TGTCGGCTGTTTGTTTATCTCATT 59.240 37.500 0.00 0.00 0.00 2.57
2514 2566 4.154195 GTGTCGGCTGTTTGTTTATCTCAT 59.846 41.667 0.00 0.00 0.00 2.90
2515 2567 3.496884 GTGTCGGCTGTTTGTTTATCTCA 59.503 43.478 0.00 0.00 0.00 3.27
2516 2568 3.120304 GGTGTCGGCTGTTTGTTTATCTC 60.120 47.826 0.00 0.00 0.00 2.75
2517 2569 2.812011 GGTGTCGGCTGTTTGTTTATCT 59.188 45.455 0.00 0.00 0.00 1.98
2518 2570 2.550606 TGGTGTCGGCTGTTTGTTTATC 59.449 45.455 0.00 0.00 0.00 1.75
2519 2571 2.577700 TGGTGTCGGCTGTTTGTTTAT 58.422 42.857 0.00 0.00 0.00 1.40
2520 2572 2.039818 TGGTGTCGGCTGTTTGTTTA 57.960 45.000 0.00 0.00 0.00 2.01
2521 2573 1.134175 CTTGGTGTCGGCTGTTTGTTT 59.866 47.619 0.00 0.00 0.00 2.83
2522 2574 0.738389 CTTGGTGTCGGCTGTTTGTT 59.262 50.000 0.00 0.00 0.00 2.83
2523 2575 0.107410 TCTTGGTGTCGGCTGTTTGT 60.107 50.000 0.00 0.00 0.00 2.83
2524 2576 1.021202 TTCTTGGTGTCGGCTGTTTG 58.979 50.000 0.00 0.00 0.00 2.93
2525 2577 1.981256 ATTCTTGGTGTCGGCTGTTT 58.019 45.000 0.00 0.00 0.00 2.83
2526 2578 1.981256 AATTCTTGGTGTCGGCTGTT 58.019 45.000 0.00 0.00 0.00 3.16
2527 2579 1.981256 AAATTCTTGGTGTCGGCTGT 58.019 45.000 0.00 0.00 0.00 4.40
2528 2580 2.159517 GCTAAATTCTTGGTGTCGGCTG 60.160 50.000 0.00 0.00 0.00 4.85
2529 2581 2.084546 GCTAAATTCTTGGTGTCGGCT 58.915 47.619 0.00 0.00 0.00 5.52
2530 2582 1.810151 TGCTAAATTCTTGGTGTCGGC 59.190 47.619 0.00 0.00 0.00 5.54
2531 2583 3.065371 GGATGCTAAATTCTTGGTGTCGG 59.935 47.826 0.00 0.00 0.00 4.79
2532 2584 3.689161 TGGATGCTAAATTCTTGGTGTCG 59.311 43.478 0.00 0.00 0.00 4.35
2533 2585 5.357878 TGATGGATGCTAAATTCTTGGTGTC 59.642 40.000 0.00 0.00 0.00 3.67
2534 2586 5.126061 GTGATGGATGCTAAATTCTTGGTGT 59.874 40.000 0.00 0.00 0.00 4.16
2535 2587 5.450965 GGTGATGGATGCTAAATTCTTGGTG 60.451 44.000 0.00 0.00 0.00 4.17
2536 2588 4.646492 GGTGATGGATGCTAAATTCTTGGT 59.354 41.667 0.00 0.00 0.00 3.67
2537 2589 4.646040 TGGTGATGGATGCTAAATTCTTGG 59.354 41.667 0.00 0.00 0.00 3.61
2538 2590 5.359009 AGTGGTGATGGATGCTAAATTCTTG 59.641 40.000 0.00 0.00 0.00 3.02
2539 2591 5.513233 AGTGGTGATGGATGCTAAATTCTT 58.487 37.500 0.00 0.00 0.00 2.52
2540 2592 5.121380 AGTGGTGATGGATGCTAAATTCT 57.879 39.130 0.00 0.00 0.00 2.40
2541 2593 4.024556 CGAGTGGTGATGGATGCTAAATTC 60.025 45.833 0.00 0.00 0.00 2.17
2542 2594 3.879295 CGAGTGGTGATGGATGCTAAATT 59.121 43.478 0.00 0.00 0.00 1.82
2543 2595 3.118261 ACGAGTGGTGATGGATGCTAAAT 60.118 43.478 0.00 0.00 0.00 1.40
2544 2596 2.236146 ACGAGTGGTGATGGATGCTAAA 59.764 45.455 0.00 0.00 0.00 1.85
2545 2597 1.831106 ACGAGTGGTGATGGATGCTAA 59.169 47.619 0.00 0.00 0.00 3.09
2546 2598 1.485124 ACGAGTGGTGATGGATGCTA 58.515 50.000 0.00 0.00 0.00 3.49
2547 2599 1.410517 CTACGAGTGGTGATGGATGCT 59.589 52.381 0.00 0.00 0.00 3.79
2548 2600 1.409064 TCTACGAGTGGTGATGGATGC 59.591 52.381 0.00 0.00 0.00 3.91
2549 2601 2.223829 GGTCTACGAGTGGTGATGGATG 60.224 54.545 0.00 0.00 0.00 3.51
2550 2602 2.032620 GGTCTACGAGTGGTGATGGAT 58.967 52.381 0.00 0.00 0.00 3.41
2551 2603 1.272258 TGGTCTACGAGTGGTGATGGA 60.272 52.381 0.00 0.00 0.00 3.41
2552 2604 1.182667 TGGTCTACGAGTGGTGATGG 58.817 55.000 0.00 0.00 0.00 3.51
2553 2605 2.427095 TCATGGTCTACGAGTGGTGATG 59.573 50.000 0.00 0.00 0.00 3.07
2554 2606 2.690497 CTCATGGTCTACGAGTGGTGAT 59.310 50.000 0.00 0.00 0.00 3.06
2555 2607 2.092323 CTCATGGTCTACGAGTGGTGA 58.908 52.381 0.00 0.00 0.00 4.02
2556 2608 1.135139 CCTCATGGTCTACGAGTGGTG 59.865 57.143 0.00 0.00 0.00 4.17
2557 2609 1.005569 TCCTCATGGTCTACGAGTGGT 59.994 52.381 0.00 0.00 34.23 4.16
2558 2610 1.678627 CTCCTCATGGTCTACGAGTGG 59.321 57.143 0.00 0.00 34.23 4.00
2559 2611 1.066303 GCTCCTCATGGTCTACGAGTG 59.934 57.143 0.00 0.00 34.23 3.51
2560 2612 1.394618 GCTCCTCATGGTCTACGAGT 58.605 55.000 0.00 0.00 34.23 4.18
2561 2613 0.309302 CGCTCCTCATGGTCTACGAG 59.691 60.000 0.00 0.00 34.23 4.18
2562 2614 1.101635 CCGCTCCTCATGGTCTACGA 61.102 60.000 0.00 0.00 34.23 3.43
2563 2615 1.360551 CCGCTCCTCATGGTCTACG 59.639 63.158 0.00 0.00 34.23 3.51
2564 2616 0.755698 TCCCGCTCCTCATGGTCTAC 60.756 60.000 0.00 0.00 34.23 2.59
2565 2617 0.032515 TTCCCGCTCCTCATGGTCTA 60.033 55.000 0.00 0.00 34.23 2.59
2566 2618 1.306141 TTCCCGCTCCTCATGGTCT 60.306 57.895 0.00 0.00 34.23 3.85
2567 2619 1.153349 GTTCCCGCTCCTCATGGTC 60.153 63.158 0.00 0.00 34.23 4.02
2568 2620 1.613630 AGTTCCCGCTCCTCATGGT 60.614 57.895 0.00 0.00 34.23 3.55
2569 2621 1.144936 GAGTTCCCGCTCCTCATGG 59.855 63.158 0.00 0.00 0.00 3.66
2570 2622 0.467384 ATGAGTTCCCGCTCCTCATG 59.533 55.000 0.00 0.00 42.70 3.07
2571 2623 2.088104 TATGAGTTCCCGCTCCTCAT 57.912 50.000 6.61 6.61 45.37 2.90
2572 2624 2.088104 ATATGAGTTCCCGCTCCTCA 57.912 50.000 0.00 0.00 39.38 3.86
2573 2625 2.103263 ACAATATGAGTTCCCGCTCCTC 59.897 50.000 0.00 0.00 34.74 3.71
2574 2626 2.119495 ACAATATGAGTTCCCGCTCCT 58.881 47.619 0.00 0.00 34.74 3.69
2575 2627 2.614057 CAACAATATGAGTTCCCGCTCC 59.386 50.000 0.00 0.00 34.74 4.70
2576 2628 2.614057 CCAACAATATGAGTTCCCGCTC 59.386 50.000 0.00 0.00 36.12 5.03
2577 2629 2.238646 TCCAACAATATGAGTTCCCGCT 59.761 45.455 0.00 0.00 0.00 5.52
2578 2630 2.639065 TCCAACAATATGAGTTCCCGC 58.361 47.619 0.00 0.00 0.00 6.13
2579 2631 6.055588 ACTTATCCAACAATATGAGTTCCCG 58.944 40.000 0.00 0.00 0.00 5.14
2580 2632 6.202954 CGACTTATCCAACAATATGAGTTCCC 59.797 42.308 0.00 0.00 0.00 3.97
2581 2633 6.984474 TCGACTTATCCAACAATATGAGTTCC 59.016 38.462 0.00 0.00 0.00 3.62
2582 2634 8.420374 TTCGACTTATCCAACAATATGAGTTC 57.580 34.615 0.00 0.00 0.00 3.01
2583 2635 8.786826 TTTCGACTTATCCAACAATATGAGTT 57.213 30.769 0.00 0.00 0.00 3.01
2584 2636 7.495934 CCTTTCGACTTATCCAACAATATGAGT 59.504 37.037 0.00 0.00 0.00 3.41
2585 2637 7.710907 TCCTTTCGACTTATCCAACAATATGAG 59.289 37.037 0.00 0.00 0.00 2.90
2586 2638 7.561251 TCCTTTCGACTTATCCAACAATATGA 58.439 34.615 0.00 0.00 0.00 2.15
2587 2639 7.710907 TCTCCTTTCGACTTATCCAACAATATG 59.289 37.037 0.00 0.00 0.00 1.78
2588 2640 7.792032 TCTCCTTTCGACTTATCCAACAATAT 58.208 34.615 0.00 0.00 0.00 1.28
2589 2641 7.177832 TCTCCTTTCGACTTATCCAACAATA 57.822 36.000 0.00 0.00 0.00 1.90
2590 2642 6.049955 TCTCCTTTCGACTTATCCAACAAT 57.950 37.500 0.00 0.00 0.00 2.71
2591 2643 5.477607 TCTCCTTTCGACTTATCCAACAA 57.522 39.130 0.00 0.00 0.00 2.83
2592 2644 5.477607 TTCTCCTTTCGACTTATCCAACA 57.522 39.130 0.00 0.00 0.00 3.33
2593 2645 6.106673 TGATTCTCCTTTCGACTTATCCAAC 58.893 40.000 0.00 0.00 0.00 3.77
2594 2646 6.294361 TGATTCTCCTTTCGACTTATCCAA 57.706 37.500 0.00 0.00 0.00 3.53
2595 2647 5.932619 TGATTCTCCTTTCGACTTATCCA 57.067 39.130 0.00 0.00 0.00 3.41
2596 2648 6.036191 GTGTTGATTCTCCTTTCGACTTATCC 59.964 42.308 0.00 0.00 0.00 2.59
2597 2649 6.036191 GGTGTTGATTCTCCTTTCGACTTATC 59.964 42.308 0.00 0.00 0.00 1.75
2598 2650 5.875359 GGTGTTGATTCTCCTTTCGACTTAT 59.125 40.000 0.00 0.00 0.00 1.73
2599 2651 5.235516 GGTGTTGATTCTCCTTTCGACTTA 58.764 41.667 0.00 0.00 0.00 2.24
2600 2652 4.065789 GGTGTTGATTCTCCTTTCGACTT 58.934 43.478 0.00 0.00 0.00 3.01
2601 2653 3.665190 GGTGTTGATTCTCCTTTCGACT 58.335 45.455 0.00 0.00 0.00 4.18
2602 2654 2.412089 CGGTGTTGATTCTCCTTTCGAC 59.588 50.000 0.00 0.00 0.00 4.20
2603 2655 2.297880 TCGGTGTTGATTCTCCTTTCGA 59.702 45.455 0.00 0.00 0.00 3.71
2604 2656 2.668457 CTCGGTGTTGATTCTCCTTTCG 59.332 50.000 0.00 0.00 0.00 3.46
2605 2657 3.926616 TCTCGGTGTTGATTCTCCTTTC 58.073 45.455 0.00 0.00 0.00 2.62
2606 2658 4.040461 TCTTCTCGGTGTTGATTCTCCTTT 59.960 41.667 0.00 0.00 0.00 3.11
2607 2659 3.578716 TCTTCTCGGTGTTGATTCTCCTT 59.421 43.478 0.00 0.00 0.00 3.36
2608 2660 3.056465 GTCTTCTCGGTGTTGATTCTCCT 60.056 47.826 0.00 0.00 0.00 3.69
2609 2661 3.254892 GTCTTCTCGGTGTTGATTCTCC 58.745 50.000 0.00 0.00 0.00 3.71
2610 2662 2.917971 CGTCTTCTCGGTGTTGATTCTC 59.082 50.000 0.00 0.00 0.00 2.87
2611 2663 2.557056 TCGTCTTCTCGGTGTTGATTCT 59.443 45.455 0.00 0.00 0.00 2.40
2612 2664 2.942710 TCGTCTTCTCGGTGTTGATTC 58.057 47.619 0.00 0.00 0.00 2.52
2613 2665 3.005472 TCTTCGTCTTCTCGGTGTTGATT 59.995 43.478 0.00 0.00 0.00 2.57
2614 2666 2.557056 TCTTCGTCTTCTCGGTGTTGAT 59.443 45.455 0.00 0.00 0.00 2.57
2615 2667 1.951602 TCTTCGTCTTCTCGGTGTTGA 59.048 47.619 0.00 0.00 0.00 3.18
2616 2668 2.031069 TCTCTTCGTCTTCTCGGTGTTG 60.031 50.000 0.00 0.00 0.00 3.33
2617 2669 2.228059 TCTCTTCGTCTTCTCGGTGTT 58.772 47.619 0.00 0.00 0.00 3.32
2618 2670 1.893544 TCTCTTCGTCTTCTCGGTGT 58.106 50.000 0.00 0.00 0.00 4.16
2619 2671 2.484651 TCTTCTCTTCGTCTTCTCGGTG 59.515 50.000 0.00 0.00 0.00 4.94
2620 2672 2.780714 TCTTCTCTTCGTCTTCTCGGT 58.219 47.619 0.00 0.00 0.00 4.69
2621 2673 3.189702 ACTTCTTCTCTTCGTCTTCTCGG 59.810 47.826 0.00 0.00 0.00 4.63
2622 2674 4.413495 ACTTCTTCTCTTCGTCTTCTCG 57.587 45.455 0.00 0.00 0.00 4.04
2623 2675 4.384547 GCAACTTCTTCTCTTCGTCTTCTC 59.615 45.833 0.00 0.00 0.00 2.87
2624 2676 4.303282 GCAACTTCTTCTCTTCGTCTTCT 58.697 43.478 0.00 0.00 0.00 2.85
2625 2677 3.430556 GGCAACTTCTTCTCTTCGTCTTC 59.569 47.826 0.00 0.00 0.00 2.87
2626 2678 3.394719 GGCAACTTCTTCTCTTCGTCTT 58.605 45.455 0.00 0.00 0.00 3.01
2627 2679 3.033368 GGCAACTTCTTCTCTTCGTCT 57.967 47.619 0.00 0.00 0.00 4.18
2642 2694 2.876368 ATCGCAGGGTAGCAGGCAAC 62.876 60.000 7.64 0.00 0.00 4.17
2643 2695 2.593468 GATCGCAGGGTAGCAGGCAA 62.593 60.000 7.64 0.00 0.00 4.52
2644 2696 3.083349 ATCGCAGGGTAGCAGGCA 61.083 61.111 7.64 0.00 0.00 4.75
2645 2697 2.280457 GATCGCAGGGTAGCAGGC 60.280 66.667 0.00 0.00 0.00 4.85
2646 2698 1.227380 GTGATCGCAGGGTAGCAGG 60.227 63.158 0.16 0.00 0.00 4.85
2647 2699 0.249238 GAGTGATCGCAGGGTAGCAG 60.249 60.000 9.33 0.00 0.00 4.24
2648 2700 1.816537 GAGTGATCGCAGGGTAGCA 59.183 57.895 9.33 0.00 0.00 3.49
2649 2701 1.299468 CGAGTGATCGCAGGGTAGC 60.299 63.158 9.33 0.00 0.00 3.58
2650 2702 1.360551 CCGAGTGATCGCAGGGTAG 59.639 63.158 9.33 0.00 0.00 3.18
2651 2703 2.782222 GCCGAGTGATCGCAGGGTA 61.782 63.158 18.43 0.00 0.00 3.69
2652 2704 4.148825 GCCGAGTGATCGCAGGGT 62.149 66.667 18.43 0.00 0.00 4.34
2653 2705 4.147449 TGCCGAGTGATCGCAGGG 62.147 66.667 18.43 14.62 0.00 4.45
2654 2706 2.887568 GTGCCGAGTGATCGCAGG 60.888 66.667 9.33 12.23 0.00 4.85
2655 2707 2.842394 AAGGTGCCGAGTGATCGCAG 62.842 60.000 9.33 1.90 0.00 5.18
2656 2708 2.942796 AAGGTGCCGAGTGATCGCA 61.943 57.895 9.33 0.00 0.00 5.10
2657 2709 2.125512 AAGGTGCCGAGTGATCGC 60.126 61.111 0.00 0.00 0.00 4.58
2658 2710 0.389817 TTCAAGGTGCCGAGTGATCG 60.390 55.000 0.00 0.00 0.00 3.69
2659 2711 1.066858 TCTTCAAGGTGCCGAGTGATC 60.067 52.381 0.00 0.00 0.00 2.92
2660 2712 0.976641 TCTTCAAGGTGCCGAGTGAT 59.023 50.000 0.00 0.00 0.00 3.06
2661 2713 0.318441 CTCTTCAAGGTGCCGAGTGA 59.682 55.000 0.00 0.00 0.00 3.41
2662 2714 1.294659 GCTCTTCAAGGTGCCGAGTG 61.295 60.000 0.00 0.00 0.00 3.51
2663 2715 1.004440 GCTCTTCAAGGTGCCGAGT 60.004 57.895 0.00 0.00 0.00 4.18
2664 2716 0.532573 TAGCTCTTCAAGGTGCCGAG 59.467 55.000 0.00 0.00 36.91 4.63
2665 2717 0.532573 CTAGCTCTTCAAGGTGCCGA 59.467 55.000 0.00 0.00 36.91 5.54
2666 2718 0.460987 CCTAGCTCTTCAAGGTGCCG 60.461 60.000 0.00 0.00 36.91 5.69
2667 2719 0.905357 TCCTAGCTCTTCAAGGTGCC 59.095 55.000 0.00 0.00 36.91 5.01
2668 2720 1.827969 TCTCCTAGCTCTTCAAGGTGC 59.172 52.381 0.00 0.00 36.91 5.01
2669 2721 3.096092 ACTCTCCTAGCTCTTCAAGGTG 58.904 50.000 0.00 0.00 36.91 4.00
2670 2722 3.245443 TGACTCTCCTAGCTCTTCAAGGT 60.245 47.826 0.00 0.00 39.57 3.50
2671 2723 3.130340 GTGACTCTCCTAGCTCTTCAAGG 59.870 52.174 0.00 0.00 0.00 3.61
2672 2724 3.761218 TGTGACTCTCCTAGCTCTTCAAG 59.239 47.826 0.00 0.00 0.00 3.02
2673 2725 3.761218 CTGTGACTCTCCTAGCTCTTCAA 59.239 47.826 0.00 0.00 0.00 2.69
2674 2726 3.351740 CTGTGACTCTCCTAGCTCTTCA 58.648 50.000 0.00 0.00 0.00 3.02
2675 2727 2.099098 GCTGTGACTCTCCTAGCTCTTC 59.901 54.545 0.00 0.00 0.00 2.87
2676 2728 2.099405 GCTGTGACTCTCCTAGCTCTT 58.901 52.381 0.00 0.00 0.00 2.85
2677 2729 1.684869 GGCTGTGACTCTCCTAGCTCT 60.685 57.143 0.00 0.00 34.89 4.09
2678 2730 0.744281 GGCTGTGACTCTCCTAGCTC 59.256 60.000 0.00 0.00 34.89 4.09
2679 2731 0.040351 TGGCTGTGACTCTCCTAGCT 59.960 55.000 0.00 0.00 34.89 3.32
2680 2732 0.174617 GTGGCTGTGACTCTCCTAGC 59.825 60.000 0.00 0.00 0.00 3.42
2681 2733 0.820871 GGTGGCTGTGACTCTCCTAG 59.179 60.000 0.00 0.00 0.00 3.02
2682 2734 0.965866 CGGTGGCTGTGACTCTCCTA 60.966 60.000 0.00 0.00 0.00 2.94
2683 2735 2.279069 CGGTGGCTGTGACTCTCCT 61.279 63.158 0.00 0.00 0.00 3.69
2684 2736 2.262915 CGGTGGCTGTGACTCTCC 59.737 66.667 0.00 0.00 0.00 3.71
2685 2737 1.080434 GACGGTGGCTGTGACTCTC 60.080 63.158 0.00 0.00 0.00 3.20
2686 2738 2.920645 CGACGGTGGCTGTGACTCT 61.921 63.158 0.00 0.00 0.00 3.24
2687 2739 2.416244 TTCGACGGTGGCTGTGACTC 62.416 60.000 0.00 0.00 0.00 3.36
2688 2740 2.421877 CTTCGACGGTGGCTGTGACT 62.422 60.000 0.00 0.00 0.00 3.41
2689 2741 2.022129 CTTCGACGGTGGCTGTGAC 61.022 63.158 0.00 0.00 0.00 3.67
2690 2742 2.338620 CTTCGACGGTGGCTGTGA 59.661 61.111 0.00 0.00 0.00 3.58
2691 2743 2.738521 CCTTCGACGGTGGCTGTG 60.739 66.667 0.00 0.00 0.00 3.66
2692 2744 4.003788 CCCTTCGACGGTGGCTGT 62.004 66.667 7.24 0.00 0.00 4.40
2695 2747 4.699522 AAGCCCTTCGACGGTGGC 62.700 66.667 7.24 13.15 44.35 5.01
2696 2748 2.434359 GAAGCCCTTCGACGGTGG 60.434 66.667 7.24 0.00 0.00 4.61
2697 2749 1.446272 GAGAAGCCCTTCGACGGTG 60.446 63.158 7.24 0.00 43.97 4.94
2698 2750 1.469335 TTGAGAAGCCCTTCGACGGT 61.469 55.000 7.24 0.00 43.97 4.83
2699 2751 0.108138 ATTGAGAAGCCCTTCGACGG 60.108 55.000 0.00 0.00 43.97 4.79
2700 2752 1.002366 CATTGAGAAGCCCTTCGACG 58.998 55.000 2.63 0.00 43.97 5.12
2701 2753 0.729690 GCATTGAGAAGCCCTTCGAC 59.270 55.000 2.63 2.79 43.97 4.20
2702 2754 0.392998 GGCATTGAGAAGCCCTTCGA 60.393 55.000 2.63 0.00 45.18 3.71
2703 2755 2.101700 GGCATTGAGAAGCCCTTCG 58.898 57.895 2.63 0.00 45.18 3.79
2709 2761 1.929836 CGTGACTAGGCATTGAGAAGC 59.070 52.381 0.00 0.00 0.00 3.86
2710 2762 3.182967 GTCGTGACTAGGCATTGAGAAG 58.817 50.000 0.00 0.00 0.00 2.85
2711 2763 2.415491 CGTCGTGACTAGGCATTGAGAA 60.415 50.000 0.00 0.00 0.00 2.87
2712 2764 1.132453 CGTCGTGACTAGGCATTGAGA 59.868 52.381 0.00 0.00 0.00 3.27
2713 2765 1.550065 CGTCGTGACTAGGCATTGAG 58.450 55.000 0.00 0.00 0.00 3.02
2714 2766 0.457853 GCGTCGTGACTAGGCATTGA 60.458 55.000 0.00 0.00 0.00 2.57
2715 2767 1.742900 CGCGTCGTGACTAGGCATTG 61.743 60.000 0.00 0.00 0.00 2.82
2716 2768 1.516386 CGCGTCGTGACTAGGCATT 60.516 57.895 0.00 0.00 0.00 3.56
2717 2769 2.102357 CGCGTCGTGACTAGGCAT 59.898 61.111 0.00 0.00 0.00 4.40
2718 2770 4.111016 CCGCGTCGTGACTAGGCA 62.111 66.667 7.51 0.00 0.00 4.75
2735 2787 2.183046 GTCTGTGGCTCTCTCCGC 59.817 66.667 0.00 0.00 37.15 5.54
2736 2788 1.326213 ATGGTCTGTGGCTCTCTCCG 61.326 60.000 0.00 0.00 0.00 4.63
2737 2789 0.177604 CATGGTCTGTGGCTCTCTCC 59.822 60.000 0.00 0.00 0.00 3.71
2738 2790 1.134848 GTCATGGTCTGTGGCTCTCTC 60.135 57.143 0.00 0.00 0.00 3.20
2739 2791 0.901124 GTCATGGTCTGTGGCTCTCT 59.099 55.000 0.00 0.00 0.00 3.10
2740 2792 0.459237 CGTCATGGTCTGTGGCTCTC 60.459 60.000 0.00 0.00 0.00 3.20
2741 2793 0.900182 TCGTCATGGTCTGTGGCTCT 60.900 55.000 0.00 0.00 0.00 4.09
2742 2794 0.037326 TTCGTCATGGTCTGTGGCTC 60.037 55.000 0.00 0.00 0.00 4.70
2743 2795 0.036952 CTTCGTCATGGTCTGTGGCT 60.037 55.000 0.00 0.00 0.00 4.75
2744 2796 1.021390 CCTTCGTCATGGTCTGTGGC 61.021 60.000 0.00 0.00 0.00 5.01
2745 2797 0.391661 CCCTTCGTCATGGTCTGTGG 60.392 60.000 0.00 0.00 0.00 4.17
2746 2798 1.021390 GCCCTTCGTCATGGTCTGTG 61.021 60.000 0.00 0.00 0.00 3.66
2747 2799 1.296715 GCCCTTCGTCATGGTCTGT 59.703 57.895 0.00 0.00 0.00 3.41
2748 2800 0.321564 TTGCCCTTCGTCATGGTCTG 60.322 55.000 0.00 0.00 0.00 3.51
2749 2801 0.321653 GTTGCCCTTCGTCATGGTCT 60.322 55.000 0.00 0.00 0.00 3.85
2750 2802 1.635663 CGTTGCCCTTCGTCATGGTC 61.636 60.000 0.00 0.00 0.00 4.02
2751 2803 1.671054 CGTTGCCCTTCGTCATGGT 60.671 57.895 0.00 0.00 0.00 3.55
2752 2804 1.234615 AACGTTGCCCTTCGTCATGG 61.235 55.000 0.00 0.00 39.39 3.66
2753 2805 0.165944 GAACGTTGCCCTTCGTCATG 59.834 55.000 5.00 0.00 39.39 3.07
2754 2806 0.953960 GGAACGTTGCCCTTCGTCAT 60.954 55.000 5.00 0.00 39.39 3.06
2755 2807 1.595929 GGAACGTTGCCCTTCGTCA 60.596 57.895 5.00 0.00 39.39 4.35
2756 2808 3.250986 GGAACGTTGCCCTTCGTC 58.749 61.111 5.00 0.00 39.39 4.20
2775 2827 4.394712 GGTGTGGGGCTGTCTCGG 62.395 72.222 0.00 0.00 0.00 4.63
2776 2828 3.302347 GAGGTGTGGGGCTGTCTCG 62.302 68.421 0.00 0.00 0.00 4.04
2777 2829 2.665603 GAGGTGTGGGGCTGTCTC 59.334 66.667 0.00 0.00 0.00 3.36
2778 2830 2.930562 GGAGGTGTGGGGCTGTCT 60.931 66.667 0.00 0.00 0.00 3.41
2779 2831 2.930562 AGGAGGTGTGGGGCTGTC 60.931 66.667 0.00 0.00 0.00 3.51
2780 2832 2.930562 GAGGAGGTGTGGGGCTGT 60.931 66.667 0.00 0.00 0.00 4.40
2781 2833 2.608988 AGAGGAGGTGTGGGGCTG 60.609 66.667 0.00 0.00 0.00 4.85
2782 2834 2.608988 CAGAGGAGGTGTGGGGCT 60.609 66.667 0.00 0.00 0.00 5.19
2783 2835 3.721706 CCAGAGGAGGTGTGGGGC 61.722 72.222 0.00 0.00 35.84 5.80
2786 2838 3.721706 GGCCCAGAGGAGGTGTGG 61.722 72.222 0.00 0.00 39.47 4.17
2787 2839 2.930019 TGGCCCAGAGGAGGTGTG 60.930 66.667 0.00 0.00 33.47 3.82
2788 2840 2.930562 GTGGCCCAGAGGAGGTGT 60.931 66.667 0.00 0.00 33.47 4.16
2789 2841 2.930019 TGTGGCCCAGAGGAGGTG 60.930 66.667 0.00 0.00 33.47 4.00
2790 2842 2.930562 GTGTGGCCCAGAGGAGGT 60.931 66.667 0.00 0.00 33.47 3.85
2791 2843 3.721706 GGTGTGGCCCAGAGGAGG 61.722 72.222 0.00 0.00 33.47 4.30
2792 2844 2.930019 TGGTGTGGCCCAGAGGAG 60.930 66.667 0.00 0.00 36.04 3.69
2793 2845 3.249189 GTGGTGTGGCCCAGAGGA 61.249 66.667 0.00 0.00 34.43 3.71
2794 2846 4.704833 CGTGGTGTGGCCCAGAGG 62.705 72.222 0.00 0.00 34.43 3.69
2795 2847 3.625897 TCGTGGTGTGGCCCAGAG 61.626 66.667 0.00 0.00 34.43 3.35
2796 2848 3.936203 GTCGTGGTGTGGCCCAGA 61.936 66.667 0.00 0.00 34.43 3.86
2801 2853 3.842925 ATGGTGGTCGTGGTGTGGC 62.843 63.158 0.00 0.00 0.00 5.01
2802 2854 1.671054 GATGGTGGTCGTGGTGTGG 60.671 63.158 0.00 0.00 0.00 4.17
2803 2855 1.070615 TGATGGTGGTCGTGGTGTG 59.929 57.895 0.00 0.00 0.00 3.82
2804 2856 1.070786 GTGATGGTGGTCGTGGTGT 59.929 57.895 0.00 0.00 0.00 4.16
2805 2857 0.533978 TTGTGATGGTGGTCGTGGTG 60.534 55.000 0.00 0.00 0.00 4.17
2806 2858 0.181587 TTTGTGATGGTGGTCGTGGT 59.818 50.000 0.00 0.00 0.00 4.16
2807 2859 1.533625 ATTTGTGATGGTGGTCGTGG 58.466 50.000 0.00 0.00 0.00 4.94
2808 2860 3.595173 TCTATTTGTGATGGTGGTCGTG 58.405 45.455 0.00 0.00 0.00 4.35
2809 2861 3.369471 CCTCTATTTGTGATGGTGGTCGT 60.369 47.826 0.00 0.00 0.00 4.34
2810 2862 3.198068 CCTCTATTTGTGATGGTGGTCG 58.802 50.000 0.00 0.00 0.00 4.79
2811 2863 3.199946 TCCCTCTATTTGTGATGGTGGTC 59.800 47.826 0.00 0.00 0.00 4.02
2812 2864 3.189606 TCCCTCTATTTGTGATGGTGGT 58.810 45.455 0.00 0.00 0.00 4.16
2813 2865 3.931907 TCCCTCTATTTGTGATGGTGG 57.068 47.619 0.00 0.00 0.00 4.61
2814 2866 3.947834 GGTTCCCTCTATTTGTGATGGTG 59.052 47.826 0.00 0.00 0.00 4.17
2815 2867 3.591527 TGGTTCCCTCTATTTGTGATGGT 59.408 43.478 0.00 0.00 0.00 3.55
2816 2868 4.080356 TCTGGTTCCCTCTATTTGTGATGG 60.080 45.833 0.00 0.00 0.00 3.51
2817 2869 5.102953 TCTGGTTCCCTCTATTTGTGATG 57.897 43.478 0.00 0.00 0.00 3.07
2818 2870 4.384647 GCTCTGGTTCCCTCTATTTGTGAT 60.385 45.833 0.00 0.00 0.00 3.06
2819 2871 3.055094 GCTCTGGTTCCCTCTATTTGTGA 60.055 47.826 0.00 0.00 0.00 3.58
2820 2872 3.274288 GCTCTGGTTCCCTCTATTTGTG 58.726 50.000 0.00 0.00 0.00 3.33
2821 2873 2.912956 TGCTCTGGTTCCCTCTATTTGT 59.087 45.455 0.00 0.00 0.00 2.83
2822 2874 3.054802 AGTGCTCTGGTTCCCTCTATTTG 60.055 47.826 0.00 0.00 0.00 2.32
2823 2875 3.185455 AGTGCTCTGGTTCCCTCTATTT 58.815 45.455 0.00 0.00 0.00 1.40
2824 2876 2.839228 AGTGCTCTGGTTCCCTCTATT 58.161 47.619 0.00 0.00 0.00 1.73
2825 2877 2.559381 AGTGCTCTGGTTCCCTCTAT 57.441 50.000 0.00 0.00 0.00 1.98
2826 2878 3.300388 CATAGTGCTCTGGTTCCCTCTA 58.700 50.000 0.00 0.00 0.00 2.43
2827 2879 2.114616 CATAGTGCTCTGGTTCCCTCT 58.885 52.381 0.00 0.00 0.00 3.69
2828 2880 1.474143 GCATAGTGCTCTGGTTCCCTC 60.474 57.143 0.00 0.00 40.96 4.30
2829 2881 0.543749 GCATAGTGCTCTGGTTCCCT 59.456 55.000 0.00 0.00 40.96 4.20
2830 2882 0.811616 CGCATAGTGCTCTGGTTCCC 60.812 60.000 0.00 0.00 42.25 3.97
2831 2883 0.175760 TCGCATAGTGCTCTGGTTCC 59.824 55.000 0.00 0.00 42.25 3.62
2832 2884 1.565305 CTCGCATAGTGCTCTGGTTC 58.435 55.000 0.00 0.00 42.25 3.62
2833 2885 0.176680 CCTCGCATAGTGCTCTGGTT 59.823 55.000 0.00 0.00 42.25 3.67
2834 2886 1.819229 CCTCGCATAGTGCTCTGGT 59.181 57.895 0.00 0.00 42.25 4.00
2835 2887 1.593750 GCCTCGCATAGTGCTCTGG 60.594 63.158 0.00 1.27 42.25 3.86
2836 2888 0.460811 TTGCCTCGCATAGTGCTCTG 60.461 55.000 0.00 0.00 42.25 3.35
2837 2889 0.460987 GTTGCCTCGCATAGTGCTCT 60.461 55.000 0.10 0.00 42.25 4.09
2838 2890 2.009888 GTTGCCTCGCATAGTGCTC 58.990 57.895 0.10 0.00 42.25 4.26
2839 2891 4.208632 GTTGCCTCGCATAGTGCT 57.791 55.556 0.10 0.00 42.25 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.