Multiple sequence alignment - TraesCS2D01G593100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G593100 chr2D 100.000 3859 0 0 1 3859 647836444 647840302 0.000000e+00 7127
1 TraesCS2D01G593100 chr2D 89.370 2728 230 36 312 3012 650780251 650777557 0.000000e+00 3376
2 TraesCS2D01G593100 chr2D 85.116 215 13 8 3248 3458 650777559 650777360 6.540000e-48 202
3 TraesCS2D01G593100 chr2A 86.314 3003 264 74 58 3012 772438722 772435819 0.000000e+00 3133
4 TraesCS2D01G593100 chr2A 91.667 216 13 2 3248 3458 772435821 772435606 1.050000e-75 294
5 TraesCS2D01G593100 chr2B 85.094 2764 291 61 295 3012 787980599 787977911 0.000000e+00 2710
6 TraesCS2D01G593100 chr2B 92.556 1706 97 21 1312 3012 787957654 787959334 0.000000e+00 2420
7 TraesCS2D01G593100 chr2B 91.078 1020 62 12 310 1313 787956544 787957550 0.000000e+00 1352
8 TraesCS2D01G593100 chr2B 91.250 240 19 2 3011 3250 423908136 423908373 3.720000e-85 326
9 TraesCS2D01G593100 chr2B 88.618 246 27 1 3005 3250 162634188 162634432 8.110000e-77 298
10 TraesCS2D01G593100 chr2B 89.041 219 16 5 3245 3458 787959329 787959544 8.220000e-67 265
11 TraesCS2D01G593100 chr6A 91.453 234 17 2 3011 3244 32656329 32656559 6.220000e-83 318
12 TraesCS2D01G593100 chr6A 87.805 246 28 2 3007 3251 491581242 491581486 1.750000e-73 287
13 TraesCS2D01G593100 chr6A 91.089 101 9 0 1039 1139 591337153 591337253 1.870000e-28 137
14 TraesCS2D01G593100 chr3D 90.041 241 22 1 3011 3251 376174111 376174349 1.040000e-80 311
15 TraesCS2D01G593100 chr7D 89.212 241 24 1 3011 3251 265000441 265000203 2.250000e-77 300
16 TraesCS2D01G593100 chr7D 92.857 98 7 0 1039 1136 359084661 359084758 4.020000e-30 143
17 TraesCS2D01G593100 chr4D 88.333 240 27 1 3011 3250 40168472 40168234 1.750000e-73 287
18 TraesCS2D01G593100 chr5D 87.008 254 30 3 3010 3262 7947092 7946841 2.270000e-72 283
19 TraesCS2D01G593100 chr5A 87.967 241 27 2 3010 3250 6147583 6147345 2.270000e-72 283
20 TraesCS2D01G593100 chr6D 78.327 263 31 14 1039 1297 441913089 441913329 3.110000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G593100 chr2D 647836444 647840302 3858 False 7127.000000 7127 100.000000 1 3859 1 chr2D.!!$F1 3858
1 TraesCS2D01G593100 chr2D 650777360 650780251 2891 True 1789.000000 3376 87.243000 312 3458 2 chr2D.!!$R1 3146
2 TraesCS2D01G593100 chr2A 772435606 772438722 3116 True 1713.500000 3133 88.990500 58 3458 2 chr2A.!!$R1 3400
3 TraesCS2D01G593100 chr2B 787977911 787980599 2688 True 2710.000000 2710 85.094000 295 3012 1 chr2B.!!$R1 2717
4 TraesCS2D01G593100 chr2B 787956544 787959544 3000 False 1345.666667 2420 90.891667 310 3458 3 chr2B.!!$F3 3148

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
278 286 0.037590 TCATTTCCCTGGTTGGACCG 59.962 55.000 0.0 0.0 42.58 4.79 F
796 818 0.339859 TCTACATCACCCAGCTCCCT 59.660 55.000 0.0 0.0 0.00 4.20 F
913 942 0.594796 CGTTTTTGGGACTGCTGCAC 60.595 55.000 0.0 0.0 0.00 4.57 F
915 944 1.136891 GTTTTTGGGACTGCTGCACTT 59.863 47.619 0.0 0.0 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1402 1569 1.004277 GTGTGATCCCCCAGTTAAGCA 59.996 52.381 0.00 0.0 0.00 3.91 R
2395 2605 0.325933 CAATGACTCAGTGGAGGGCA 59.674 55.000 0.00 0.0 45.81 5.36 R
2396 2606 1.028868 GCAATGACTCAGTGGAGGGC 61.029 60.000 8.49 0.0 45.81 5.19 R
2878 3090 2.042831 GCCTCTTGGACGCAGCATT 61.043 57.895 0.00 0.0 34.57 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.073274 GCCCTTGGTCTTCATTACTGT 57.927 47.619 0.00 0.00 0.00 3.55
21 22 3.010420 GCCCTTGGTCTTCATTACTGTC 58.990 50.000 0.00 0.00 0.00 3.51
22 23 3.262420 CCCTTGGTCTTCATTACTGTCG 58.738 50.000 0.00 0.00 0.00 4.35
23 24 2.673368 CCTTGGTCTTCATTACTGTCGC 59.327 50.000 0.00 0.00 0.00 5.19
24 25 2.380084 TGGTCTTCATTACTGTCGCC 57.620 50.000 0.00 0.00 0.00 5.54
25 26 1.621317 TGGTCTTCATTACTGTCGCCA 59.379 47.619 0.00 0.00 0.00 5.69
26 27 2.236146 TGGTCTTCATTACTGTCGCCAT 59.764 45.455 0.00 0.00 0.00 4.40
27 28 2.609459 GGTCTTCATTACTGTCGCCATG 59.391 50.000 0.00 0.00 0.00 3.66
28 29 3.521560 GTCTTCATTACTGTCGCCATGA 58.478 45.455 0.00 0.00 0.00 3.07
39 40 3.626028 GTCGCCATGACTGAAACTTTT 57.374 42.857 0.00 0.00 44.58 2.27
40 41 3.300009 GTCGCCATGACTGAAACTTTTG 58.700 45.455 0.00 0.00 44.58 2.44
41 42 2.053627 CGCCATGACTGAAACTTTTGC 58.946 47.619 0.00 0.00 0.00 3.68
42 43 2.543445 CGCCATGACTGAAACTTTTGCA 60.543 45.455 0.00 0.00 0.00 4.08
43 44 3.054878 GCCATGACTGAAACTTTTGCAG 58.945 45.455 0.00 0.00 35.81 4.41
44 45 3.243501 GCCATGACTGAAACTTTTGCAGA 60.244 43.478 0.66 0.00 33.94 4.26
45 46 4.737352 GCCATGACTGAAACTTTTGCAGAA 60.737 41.667 0.66 0.00 33.94 3.02
46 47 5.535333 CCATGACTGAAACTTTTGCAGAAT 58.465 37.500 0.66 0.00 33.94 2.40
47 48 5.404366 CCATGACTGAAACTTTTGCAGAATG 59.596 40.000 0.66 4.68 40.87 2.67
68 69 2.341257 CAGCAGGCCGTATTAGCATAG 58.659 52.381 0.00 0.00 0.00 2.23
94 95 9.226345 GCATCTATTGATTTTAAGTTGTAGCAC 57.774 33.333 0.00 0.00 0.00 4.40
102 103 8.347035 TGATTTTAAGTTGTAGCACCAAACTAC 58.653 33.333 0.00 0.00 40.37 2.73
104 105 6.854496 TTAAGTTGTAGCACCAAACTACTG 57.146 37.500 0.00 0.00 40.56 2.74
157 165 3.333804 TGCGCTGACTGAATAATGTGAA 58.666 40.909 9.73 0.00 0.00 3.18
191 199 9.043548 ACTACCAGTTACAGACCAAAATATACT 57.956 33.333 0.00 0.00 0.00 2.12
196 204 9.314321 CAGTTACAGACCAAAATATACTGGTAG 57.686 37.037 8.30 7.30 46.12 3.18
214 222 4.344102 TGGTAGATAAGCGCAGGAAATACT 59.656 41.667 11.47 0.17 0.00 2.12
215 223 4.924462 GGTAGATAAGCGCAGGAAATACTC 59.076 45.833 11.47 0.00 0.00 2.59
216 224 4.672587 AGATAAGCGCAGGAAATACTCA 57.327 40.909 11.47 0.00 0.00 3.41
217 225 4.372656 AGATAAGCGCAGGAAATACTCAC 58.627 43.478 11.47 0.00 0.00 3.51
218 226 2.770164 AAGCGCAGGAAATACTCACT 57.230 45.000 11.47 0.00 0.00 3.41
221 229 1.661112 GCGCAGGAAATACTCACTCAC 59.339 52.381 0.30 0.00 0.00 3.51
228 236 4.106197 GGAAATACTCACTCACTGTAGCG 58.894 47.826 0.00 0.00 0.00 4.26
232 240 1.954382 ACTCACTCACTGTAGCGAACA 59.046 47.619 0.00 0.00 36.42 3.18
239 247 5.396362 CACTCACTGTAGCGAACAATTTTTG 59.604 40.000 0.00 0.00 37.74 2.44
241 249 6.259167 ACTCACTGTAGCGAACAATTTTTGTA 59.741 34.615 0.00 0.00 44.59 2.41
249 257 5.856455 AGCGAACAATTTTTGTAGTACATGC 59.144 36.000 3.28 0.00 44.59 4.06
253 261 7.201149 CGAACAATTTTTGTAGTACATGCTTCG 60.201 37.037 3.28 11.92 44.59 3.79
267 275 2.151202 TGCTTCGTTCTGTCATTTCCC 58.849 47.619 0.00 0.00 0.00 3.97
276 284 2.162681 CTGTCATTTCCCTGGTTGGAC 58.837 52.381 0.00 0.00 38.35 4.02
277 285 1.203001 TGTCATTTCCCTGGTTGGACC 60.203 52.381 0.00 0.00 39.22 4.46
278 286 0.037590 TCATTTCCCTGGTTGGACCG 59.962 55.000 0.00 0.00 42.58 4.79
279 287 0.037590 CATTTCCCTGGTTGGACCGA 59.962 55.000 0.00 0.00 42.58 4.69
625 647 3.518998 CTCGGACCTCGCGGTGAT 61.519 66.667 0.00 0.00 45.73 3.06
646 668 4.760047 GTCCATGACGCCCACGCT 62.760 66.667 0.00 0.00 45.53 5.07
745 767 2.369633 ATCTGGTGCTGATGGGCGA 61.370 57.895 0.00 0.00 34.52 5.54
754 776 2.031768 GATGGGCGATGGAGGCTC 59.968 66.667 5.78 5.78 36.85 4.70
796 818 0.339859 TCTACATCACCCAGCTCCCT 59.660 55.000 0.00 0.00 0.00 4.20
804 826 0.620556 ACCCAGCTCCCTTGTATGTG 59.379 55.000 0.00 0.00 0.00 3.21
809 831 1.283029 AGCTCCCTTGTATGTGCATGT 59.717 47.619 0.00 0.00 0.00 3.21
864 891 9.720874 TTATCCTCTGCATCCTGATAATACTAT 57.279 33.333 0.00 0.00 0.00 2.12
913 942 0.594796 CGTTTTTGGGACTGCTGCAC 60.595 55.000 0.00 0.00 0.00 4.57
915 944 1.136891 GTTTTTGGGACTGCTGCACTT 59.863 47.619 0.00 0.00 0.00 3.16
958 989 6.313658 TGTCACAGCACATAGTATGAACAATC 59.686 38.462 17.13 1.75 0.00 2.67
1139 1186 2.356069 GCCTGGAGCTGCTATTTTGTAC 59.644 50.000 6.82 0.00 38.99 2.90
1140 1187 3.878778 CCTGGAGCTGCTATTTTGTACT 58.121 45.455 6.82 0.00 0.00 2.73
1141 1188 3.873952 CCTGGAGCTGCTATTTTGTACTC 59.126 47.826 6.82 0.00 0.00 2.59
1142 1189 4.383552 CCTGGAGCTGCTATTTTGTACTCT 60.384 45.833 6.82 0.00 0.00 3.24
1143 1190 5.163405 CCTGGAGCTGCTATTTTGTACTCTA 60.163 44.000 6.82 0.00 0.00 2.43
1144 1191 6.463614 CCTGGAGCTGCTATTTTGTACTCTAT 60.464 42.308 6.82 0.00 0.00 1.98
1145 1192 6.516718 TGGAGCTGCTATTTTGTACTCTATC 58.483 40.000 6.82 0.00 0.00 2.08
1208 1255 4.322953 CCCATGGCTTGCTACAAAGATTTT 60.323 41.667 6.09 0.00 0.00 1.82
1237 1284 6.476243 TCGTTTAGTTTACCAATCAGAAGC 57.524 37.500 0.00 0.00 0.00 3.86
1274 1329 3.181466 GGTTTTGTGAACCCAATTGCTCT 60.181 43.478 0.00 0.00 34.26 4.09
1276 1331 3.731652 TTGTGAACCCAATTGCTCTTG 57.268 42.857 0.00 0.00 0.00 3.02
1277 1332 1.340889 TGTGAACCCAATTGCTCTTGC 59.659 47.619 0.00 0.00 40.20 4.01
1287 1342 2.113986 GCTCTTGCTGGGTGGTGT 59.886 61.111 0.00 0.00 36.03 4.16
1367 1534 1.671850 GCGCAGTAGGTTTGCTAGACA 60.672 52.381 0.30 0.00 39.38 3.41
1384 1551 5.278957 GCTAGACATGGAATTGGTGTGTTTT 60.279 40.000 0.00 0.00 0.00 2.43
1385 1552 5.612725 AGACATGGAATTGGTGTGTTTTT 57.387 34.783 0.00 0.00 0.00 1.94
1473 1640 5.514274 TTTGAAGTTGGACCACTCATTTC 57.486 39.130 0.00 0.00 0.00 2.17
1500 1667 3.613737 TGCGTTGTTACTAATTCGCTACC 59.386 43.478 8.63 0.00 43.23 3.18
1607 1775 7.487829 GTCAGTGAGCTGTTTTGACAAAATTAA 59.512 33.333 16.03 5.32 43.05 1.40
1618 1786 6.561737 TTGACAAAATTAATCGCTGGTGTA 57.438 33.333 0.00 0.00 0.00 2.90
1620 1788 7.151999 TGACAAAATTAATCGCTGGTGTATT 57.848 32.000 0.00 0.00 0.00 1.89
1635 1803 4.086457 GGTGTATTGTTGGGATTCAAGGT 58.914 43.478 0.00 0.00 35.80 3.50
1706 1875 8.837099 ACCACTTATTTTCATGGATTTATGGA 57.163 30.769 0.00 0.00 36.04 3.41
1707 1876 9.438163 ACCACTTATTTTCATGGATTTATGGAT 57.562 29.630 0.00 0.00 36.04 3.41
1708 1877 9.701098 CCACTTATTTTCATGGATTTATGGATG 57.299 33.333 0.00 0.00 33.80 3.51
1752 1935 4.806640 CCACTTTATGGCAACCATTTCT 57.193 40.909 4.11 0.00 42.23 2.52
1785 1969 7.488322 TCCCAGTTAATTCTTTTTGTCACTTG 58.512 34.615 0.00 0.00 0.00 3.16
2390 2600 1.398390 GGTACATCTTCAAAGGCAGCG 59.602 52.381 0.00 0.00 0.00 5.18
2396 2606 0.239347 CTTCAAAGGCAGCGTCCTTG 59.761 55.000 12.30 7.78 45.25 3.61
2433 2643 3.865011 TGCTCTGCAAGTAAGAGAGAG 57.135 47.619 4.21 0.00 43.27 3.20
2437 2647 4.994217 GCTCTGCAAGTAAGAGAGAGTTTT 59.006 41.667 4.21 0.00 43.27 2.43
2542 2754 5.513233 AGGCCTTCATATCACTTGAACATT 58.487 37.500 0.00 0.00 0.00 2.71
2571 2783 5.049405 AGTCACAAAATTCCGTCATGAGAAC 60.049 40.000 0.00 0.00 0.00 3.01
2572 2784 4.819088 TCACAAAATTCCGTCATGAGAACA 59.181 37.500 0.00 0.00 0.00 3.18
2605 2817 8.050778 TCGTGCAATTAAGGTATTTCATCTTT 57.949 30.769 0.00 0.00 0.00 2.52
2606 2818 8.519526 TCGTGCAATTAAGGTATTTCATCTTTT 58.480 29.630 0.00 0.00 0.00 2.27
2651 2863 6.244552 TCAGATGGATAATGAGTTGAAGCT 57.755 37.500 0.00 0.00 0.00 3.74
2653 2865 7.971201 TCAGATGGATAATGAGTTGAAGCTAT 58.029 34.615 0.00 0.00 0.00 2.97
2728 2940 9.793259 ATGAATACAAGAAGTGAAGGTTTAAGA 57.207 29.630 0.00 0.00 0.00 2.10
2868 3080 2.936498 GTTCCACGGTGATAACCAGATG 59.064 50.000 10.28 0.00 0.00 2.90
2878 3090 5.705441 GGTGATAACCAGATGTTGAAGTTCA 59.295 40.000 0.08 0.08 37.83 3.18
2890 3102 0.874390 GAAGTTCAATGCTGCGTCCA 59.126 50.000 0.00 0.00 0.00 4.02
2902 3114 1.600916 GCGTCCAAGAGGCTGGTTT 60.601 57.895 0.00 0.00 39.86 3.27
2939 3151 9.554724 TTGATTTCATCGTAATTTTAGCAGTTC 57.445 29.630 0.00 0.00 0.00 3.01
2974 3186 9.618890 AGCTCTTTCAACTTATTTATAGCATGA 57.381 29.630 0.00 0.00 0.00 3.07
2975 3187 9.875675 GCTCTTTCAACTTATTTATAGCATGAG 57.124 33.333 0.00 0.00 0.00 2.90
3012 3226 7.865706 ATAATGGAATCTTGAACAGTGGTAC 57.134 36.000 0.00 0.00 0.00 3.34
3013 3227 4.974645 TGGAATCTTGAACAGTGGTACT 57.025 40.909 0.00 0.00 0.00 2.73
3014 3228 6.620877 ATGGAATCTTGAACAGTGGTACTA 57.379 37.500 0.00 0.00 0.00 1.82
3015 3229 5.790593 TGGAATCTTGAACAGTGGTACTAC 58.209 41.667 0.19 0.19 0.00 2.73
3016 3230 5.176592 GGAATCTTGAACAGTGGTACTACC 58.823 45.833 5.65 0.00 39.22 3.18
3017 3231 5.046520 GGAATCTTGAACAGTGGTACTACCT 60.047 44.000 5.65 0.00 39.58 3.08
3018 3232 5.662674 ATCTTGAACAGTGGTACTACCTC 57.337 43.478 5.65 3.14 39.58 3.85
3019 3233 3.830755 TCTTGAACAGTGGTACTACCTCC 59.169 47.826 5.65 0.00 39.58 4.30
3020 3234 2.165167 TGAACAGTGGTACTACCTCCG 58.835 52.381 5.65 0.00 39.58 4.63
3021 3235 2.165998 GAACAGTGGTACTACCTCCGT 58.834 52.381 5.65 0.00 39.58 4.69
3022 3236 1.831580 ACAGTGGTACTACCTCCGTC 58.168 55.000 5.65 0.00 39.58 4.79
3023 3237 1.101331 CAGTGGTACTACCTCCGTCC 58.899 60.000 5.65 0.00 39.58 4.79
3024 3238 0.998145 AGTGGTACTACCTCCGTCCT 59.002 55.000 5.65 0.00 39.58 3.85
3025 3239 1.101331 GTGGTACTACCTCCGTCCTG 58.899 60.000 6.79 0.00 39.58 3.86
3026 3240 0.033796 TGGTACTACCTCCGTCCTGG 60.034 60.000 6.79 0.00 39.58 4.45
3027 3241 0.033699 GGTACTACCTCCGTCCTGGT 60.034 60.000 0.00 0.00 39.52 4.00
3028 3242 1.618074 GGTACTACCTCCGTCCTGGTT 60.618 57.143 0.00 0.00 39.52 3.67
3029 3243 2.174360 GTACTACCTCCGTCCTGGTTT 58.826 52.381 0.00 0.00 39.52 3.27
3030 3244 2.610438 ACTACCTCCGTCCTGGTTTA 57.390 50.000 0.00 0.00 39.52 2.01
3031 3245 3.111741 ACTACCTCCGTCCTGGTTTAT 57.888 47.619 0.00 0.00 39.52 1.40
3032 3246 3.447950 ACTACCTCCGTCCTGGTTTATT 58.552 45.455 0.00 0.00 39.52 1.40
3033 3247 4.613437 ACTACCTCCGTCCTGGTTTATTA 58.387 43.478 0.00 0.00 39.52 0.98
3034 3248 4.648307 ACTACCTCCGTCCTGGTTTATTAG 59.352 45.833 0.00 0.00 39.52 1.73
3035 3249 3.447950 ACCTCCGTCCTGGTTTATTAGT 58.552 45.455 0.00 0.00 39.52 2.24
3036 3250 3.450096 ACCTCCGTCCTGGTTTATTAGTC 59.550 47.826 0.00 0.00 39.52 2.59
3037 3251 3.181468 CCTCCGTCCTGGTTTATTAGTCC 60.181 52.174 0.00 0.00 39.52 3.85
3038 3252 3.705072 CTCCGTCCTGGTTTATTAGTCCT 59.295 47.826 0.00 0.00 39.52 3.85
3039 3253 3.703052 TCCGTCCTGGTTTATTAGTCCTC 59.297 47.826 0.00 0.00 39.52 3.71
3040 3254 3.705072 CCGTCCTGGTTTATTAGTCCTCT 59.295 47.826 0.00 0.00 0.00 3.69
3041 3255 4.161754 CCGTCCTGGTTTATTAGTCCTCTT 59.838 45.833 0.00 0.00 0.00 2.85
3042 3256 5.338137 CCGTCCTGGTTTATTAGTCCTCTTT 60.338 44.000 0.00 0.00 0.00 2.52
3043 3257 5.581085 CGTCCTGGTTTATTAGTCCTCTTTG 59.419 44.000 0.00 0.00 0.00 2.77
3044 3258 5.354513 GTCCTGGTTTATTAGTCCTCTTTGC 59.645 44.000 0.00 0.00 0.00 3.68
3045 3259 5.013704 TCCTGGTTTATTAGTCCTCTTTGCA 59.986 40.000 0.00 0.00 0.00 4.08
3046 3260 5.888161 CCTGGTTTATTAGTCCTCTTTGCAT 59.112 40.000 0.00 0.00 0.00 3.96
3047 3261 6.378280 CCTGGTTTATTAGTCCTCTTTGCATT 59.622 38.462 0.00 0.00 0.00 3.56
3048 3262 7.391148 TGGTTTATTAGTCCTCTTTGCATTC 57.609 36.000 0.00 0.00 0.00 2.67
3049 3263 7.175104 TGGTTTATTAGTCCTCTTTGCATTCT 58.825 34.615 0.00 0.00 0.00 2.40
3050 3264 7.121168 TGGTTTATTAGTCCTCTTTGCATTCTG 59.879 37.037 0.00 0.00 0.00 3.02
3051 3265 7.121315 GGTTTATTAGTCCTCTTTGCATTCTGT 59.879 37.037 0.00 0.00 0.00 3.41
3052 3266 7.615582 TTATTAGTCCTCTTTGCATTCTGTG 57.384 36.000 0.00 0.00 0.00 3.66
3065 3279 4.996062 CATTCTGTGCCAAATTTTGACC 57.004 40.909 10.72 2.35 0.00 4.02
3066 3280 4.634199 CATTCTGTGCCAAATTTTGACCT 58.366 39.130 10.72 0.00 0.00 3.85
3067 3281 4.751767 TTCTGTGCCAAATTTTGACCTT 57.248 36.364 10.72 0.00 0.00 3.50
3068 3282 5.860941 TTCTGTGCCAAATTTTGACCTTA 57.139 34.783 10.72 0.00 0.00 2.69
3069 3283 5.860941 TCTGTGCCAAATTTTGACCTTAA 57.139 34.783 10.72 0.00 0.00 1.85
3070 3284 6.227298 TCTGTGCCAAATTTTGACCTTAAA 57.773 33.333 10.72 0.00 0.00 1.52
3071 3285 6.825610 TCTGTGCCAAATTTTGACCTTAAAT 58.174 32.000 10.72 0.00 0.00 1.40
3072 3286 7.278875 TCTGTGCCAAATTTTGACCTTAAATT 58.721 30.769 10.72 0.00 36.91 1.82
3073 3287 7.772757 TCTGTGCCAAATTTTGACCTTAAATTT 59.227 29.630 10.72 0.00 42.72 1.82
3074 3288 8.964476 TGTGCCAAATTTTGACCTTAAATTTA 57.036 26.923 10.72 0.00 41.03 1.40
3075 3289 9.396022 TGTGCCAAATTTTGACCTTAAATTTAA 57.604 25.926 10.72 10.16 41.03 1.52
3076 3290 9.658475 GTGCCAAATTTTGACCTTAAATTTAAC 57.342 29.630 10.72 0.00 41.03 2.01
3077 3291 9.620259 TGCCAAATTTTGACCTTAAATTTAACT 57.380 25.926 10.72 0.00 41.03 2.24
3146 3360 8.964420 AACTATGTTCAAATACAAATCCAACG 57.036 30.769 0.00 0.00 0.00 4.10
3147 3361 8.330466 ACTATGTTCAAATACAAATCCAACGA 57.670 30.769 0.00 0.00 0.00 3.85
3148 3362 8.956426 ACTATGTTCAAATACAAATCCAACGAT 58.044 29.630 0.00 0.00 0.00 3.73
3222 3436 9.796120 TCAAAATTTAGCATAAAATACGAAGGG 57.204 29.630 0.00 0.00 0.00 3.95
3223 3437 9.030301 CAAAATTTAGCATAAAATACGAAGGGG 57.970 33.333 0.00 0.00 0.00 4.79
3224 3438 8.528044 AAATTTAGCATAAAATACGAAGGGGA 57.472 30.769 0.00 0.00 0.00 4.81
3225 3439 6.930667 TTTAGCATAAAATACGAAGGGGAC 57.069 37.500 0.00 0.00 0.00 4.46
3240 3454 1.746470 GGGACCAATAAACCAGGACG 58.254 55.000 0.00 0.00 0.00 4.79
3241 3455 1.680860 GGGACCAATAAACCAGGACGG 60.681 57.143 0.00 0.00 42.50 4.79
3242 3456 1.279846 GGACCAATAAACCAGGACGGA 59.720 52.381 0.00 0.00 38.63 4.69
3243 3457 2.629051 GACCAATAAACCAGGACGGAG 58.371 52.381 0.00 0.00 38.63 4.63
3244 3458 1.280998 ACCAATAAACCAGGACGGAGG 59.719 52.381 0.00 0.00 38.63 4.30
3245 3459 1.280998 CCAATAAACCAGGACGGAGGT 59.719 52.381 0.00 0.00 40.61 3.85
3246 3460 2.502538 CCAATAAACCAGGACGGAGGTA 59.497 50.000 0.00 0.00 37.07 3.08
3247 3461 3.431766 CCAATAAACCAGGACGGAGGTAG 60.432 52.174 0.00 0.00 37.07 3.18
3248 3462 2.610438 TAAACCAGGACGGAGGTAGT 57.390 50.000 0.00 0.00 37.07 2.73
3249 3463 2.610438 AAACCAGGACGGAGGTAGTA 57.390 50.000 0.00 0.00 37.07 1.82
3258 3472 3.220940 GACGGAGGTAGTAGCCTGTAAT 58.779 50.000 0.00 0.00 39.34 1.89
3331 3549 9.744468 GGATTGTTAACTGTGTAATTCTTGTTT 57.256 29.630 7.22 0.00 0.00 2.83
3363 3581 4.940654 GTGGGAGAGAAGAAGAAAAGATGG 59.059 45.833 0.00 0.00 0.00 3.51
3458 3677 8.755018 CAAAATAGTTAGACTTTGCCACTTTTG 58.245 33.333 0.00 0.00 0.00 2.44
3459 3678 7.817418 AATAGTTAGACTTTGCCACTTTTGA 57.183 32.000 0.00 0.00 0.00 2.69
3460 3679 5.757850 AGTTAGACTTTGCCACTTTTGAG 57.242 39.130 0.00 0.00 0.00 3.02
3461 3680 4.036852 AGTTAGACTTTGCCACTTTTGAGC 59.963 41.667 0.00 0.00 0.00 4.26
3462 3681 2.659428 AGACTTTGCCACTTTTGAGCT 58.341 42.857 0.00 0.00 0.00 4.09
3463 3682 3.026694 AGACTTTGCCACTTTTGAGCTT 58.973 40.909 0.00 0.00 0.00 3.74
3464 3683 3.118542 GACTTTGCCACTTTTGAGCTTG 58.881 45.455 0.00 0.00 0.00 4.01
3465 3684 2.159057 ACTTTGCCACTTTTGAGCTTGG 60.159 45.455 0.00 0.00 0.00 3.61
3466 3685 0.752054 TTGCCACTTTTGAGCTTGGG 59.248 50.000 2.16 0.00 0.00 4.12
3467 3686 0.396974 TGCCACTTTTGAGCTTGGGT 60.397 50.000 2.16 0.00 0.00 4.51
3468 3687 0.752658 GCCACTTTTGAGCTTGGGTT 59.247 50.000 2.16 0.00 0.00 4.11
3469 3688 1.269778 GCCACTTTTGAGCTTGGGTTC 60.270 52.381 2.16 0.00 0.00 3.62
3470 3689 2.310538 CCACTTTTGAGCTTGGGTTCT 58.689 47.619 0.00 0.00 0.00 3.01
3471 3690 2.035066 CCACTTTTGAGCTTGGGTTCTG 59.965 50.000 0.00 0.00 0.00 3.02
3472 3691 2.035066 CACTTTTGAGCTTGGGTTCTGG 59.965 50.000 0.00 0.00 0.00 3.86
3473 3692 1.000171 CTTTTGAGCTTGGGTTCTGGC 60.000 52.381 0.00 0.00 0.00 4.85
3474 3693 0.185901 TTTGAGCTTGGGTTCTGGCT 59.814 50.000 0.00 0.00 37.77 4.75
3475 3694 0.538057 TTGAGCTTGGGTTCTGGCTG 60.538 55.000 0.00 0.00 35.01 4.85
3476 3695 1.376466 GAGCTTGGGTTCTGGCTGA 59.624 57.895 0.00 0.00 35.01 4.26
3477 3696 0.034670 GAGCTTGGGTTCTGGCTGAT 60.035 55.000 0.00 0.00 35.01 2.90
3478 3697 0.407139 AGCTTGGGTTCTGGCTGATT 59.593 50.000 0.00 0.00 33.50 2.57
3479 3698 1.203100 AGCTTGGGTTCTGGCTGATTT 60.203 47.619 0.00 0.00 33.50 2.17
3480 3699 1.067354 GCTTGGGTTCTGGCTGATTTG 60.067 52.381 0.00 0.00 0.00 2.32
3481 3700 0.968405 TTGGGTTCTGGCTGATTTGC 59.032 50.000 0.00 0.00 0.00 3.68
3482 3701 0.112995 TGGGTTCTGGCTGATTTGCT 59.887 50.000 0.00 0.00 0.00 3.91
3483 3702 1.354031 TGGGTTCTGGCTGATTTGCTA 59.646 47.619 0.00 0.00 0.00 3.49
3484 3703 2.224992 TGGGTTCTGGCTGATTTGCTAA 60.225 45.455 0.00 0.00 0.00 3.09
3485 3704 3.026694 GGGTTCTGGCTGATTTGCTAAT 58.973 45.455 0.00 0.00 0.00 1.73
3486 3705 3.067320 GGGTTCTGGCTGATTTGCTAATC 59.933 47.826 13.16 13.16 40.50 1.75
3487 3706 3.696051 GGTTCTGGCTGATTTGCTAATCA 59.304 43.478 20.03 20.03 45.99 2.57
3488 3707 4.439289 GGTTCTGGCTGATTTGCTAATCAC 60.439 45.833 17.88 14.34 43.93 3.06
3489 3708 2.938451 TCTGGCTGATTTGCTAATCACG 59.062 45.455 17.88 14.68 43.93 4.35
3490 3709 2.016318 TGGCTGATTTGCTAATCACGG 58.984 47.619 17.88 11.44 43.93 4.94
3491 3710 2.017049 GGCTGATTTGCTAATCACGGT 58.983 47.619 17.88 0.00 43.93 4.83
3492 3711 2.223340 GGCTGATTTGCTAATCACGGTG 60.223 50.000 17.88 10.52 43.93 4.94
3493 3712 2.792542 GCTGATTTGCTAATCACGGTGC 60.793 50.000 17.88 15.63 43.93 5.01
3494 3713 2.679837 CTGATTTGCTAATCACGGTGCT 59.320 45.455 17.88 0.00 43.93 4.40
3495 3714 3.081061 TGATTTGCTAATCACGGTGCTT 58.919 40.909 17.88 2.53 43.93 3.91
3496 3715 3.126858 TGATTTGCTAATCACGGTGCTTC 59.873 43.478 17.88 0.00 43.93 3.86
3497 3716 2.177394 TTGCTAATCACGGTGCTTCA 57.823 45.000 2.51 0.00 0.00 3.02
3498 3717 2.401583 TGCTAATCACGGTGCTTCAT 57.598 45.000 2.51 0.00 0.00 2.57
3499 3718 2.710377 TGCTAATCACGGTGCTTCATT 58.290 42.857 2.51 0.75 0.00 2.57
3500 3719 3.081061 TGCTAATCACGGTGCTTCATTT 58.919 40.909 2.51 0.00 0.00 2.32
3501 3720 3.505680 TGCTAATCACGGTGCTTCATTTT 59.494 39.130 2.51 0.00 0.00 1.82
3502 3721 3.853671 GCTAATCACGGTGCTTCATTTTG 59.146 43.478 2.51 0.00 0.00 2.44
3503 3722 4.379394 GCTAATCACGGTGCTTCATTTTGA 60.379 41.667 2.51 0.00 0.00 2.69
3504 3723 3.559238 ATCACGGTGCTTCATTTTGAC 57.441 42.857 2.51 0.00 0.00 3.18
3505 3724 2.293170 TCACGGTGCTTCATTTTGACA 58.707 42.857 2.51 0.00 0.00 3.58
3506 3725 2.290367 TCACGGTGCTTCATTTTGACAG 59.710 45.455 2.51 0.00 0.00 3.51
3507 3726 2.033299 CACGGTGCTTCATTTTGACAGT 59.967 45.455 0.00 0.00 0.00 3.55
3508 3727 2.687935 ACGGTGCTTCATTTTGACAGTT 59.312 40.909 0.00 0.00 0.00 3.16
3509 3728 3.044986 CGGTGCTTCATTTTGACAGTTG 58.955 45.455 0.00 0.00 0.00 3.16
3510 3729 3.243035 CGGTGCTTCATTTTGACAGTTGA 60.243 43.478 0.00 0.00 0.00 3.18
3511 3730 4.557296 CGGTGCTTCATTTTGACAGTTGAT 60.557 41.667 0.00 0.00 0.00 2.57
3512 3731 4.919754 GGTGCTTCATTTTGACAGTTGATC 59.080 41.667 0.00 0.00 0.00 2.92
3513 3732 4.614284 GTGCTTCATTTTGACAGTTGATCG 59.386 41.667 0.00 0.00 0.00 3.69
3514 3733 4.514816 TGCTTCATTTTGACAGTTGATCGA 59.485 37.500 0.00 0.00 0.00 3.59
3515 3734 5.084722 GCTTCATTTTGACAGTTGATCGAG 58.915 41.667 0.00 0.00 0.00 4.04
3516 3735 4.668576 TCATTTTGACAGTTGATCGAGC 57.331 40.909 0.00 0.00 0.00 5.03
3517 3736 3.123453 TCATTTTGACAGTTGATCGAGCG 59.877 43.478 0.00 0.00 0.00 5.03
3518 3737 1.428448 TTTGACAGTTGATCGAGCGG 58.572 50.000 0.00 0.00 0.00 5.52
3519 3738 0.389817 TTGACAGTTGATCGAGCGGG 60.390 55.000 0.00 0.00 0.00 6.13
3520 3739 2.125512 ACAGTTGATCGAGCGGGC 60.126 61.111 0.00 0.00 0.00 6.13
3521 3740 2.892425 CAGTTGATCGAGCGGGCC 60.892 66.667 0.00 0.00 0.00 5.80
3522 3741 4.514577 AGTTGATCGAGCGGGCCG 62.515 66.667 24.35 24.35 0.00 6.13
3523 3742 4.814294 GTTGATCGAGCGGGCCGT 62.814 66.667 28.82 14.51 0.00 5.68
3524 3743 4.812476 TTGATCGAGCGGGCCGTG 62.812 66.667 28.82 17.64 0.00 4.94
3545 3764 2.034066 CAATGGTGGACAGGCGGT 59.966 61.111 0.00 0.00 0.00 5.68
3546 3765 2.034066 AATGGTGGACAGGCGGTG 59.966 61.111 0.00 0.00 0.00 4.94
3547 3766 2.525124 AATGGTGGACAGGCGGTGA 61.525 57.895 0.00 0.00 0.00 4.02
3548 3767 2.748058 AATGGTGGACAGGCGGTGAC 62.748 60.000 0.00 0.00 0.00 3.67
3549 3768 3.936203 GGTGGACAGGCGGTGACA 61.936 66.667 0.00 0.00 0.00 3.58
3550 3769 2.665185 GTGGACAGGCGGTGACAC 60.665 66.667 0.00 0.39 33.00 3.67
3551 3770 3.936203 TGGACAGGCGGTGACACC 61.936 66.667 15.13 15.13 34.05 4.16
3552 3771 3.936203 GGACAGGCGGTGACACCA 61.936 66.667 24.18 0.00 38.47 4.17
3553 3772 2.357517 GACAGGCGGTGACACCAG 60.358 66.667 24.18 16.88 38.47 4.00
3554 3773 4.626081 ACAGGCGGTGACACCAGC 62.626 66.667 24.18 24.28 38.47 4.85
3563 3782 2.740055 GACACCAGCGTGGCTCTG 60.740 66.667 4.23 0.00 45.43 3.35
3564 3783 3.226429 GACACCAGCGTGGCTCTGA 62.226 63.158 4.23 0.00 45.43 3.27
3565 3784 2.433838 CACCAGCGTGGCTCTGAG 60.434 66.667 0.00 0.00 42.67 3.35
3566 3785 2.919856 ACCAGCGTGGCTCTGAGT 60.920 61.111 6.53 0.00 42.67 3.41
3567 3786 2.433838 CCAGCGTGGCTCTGAGTG 60.434 66.667 6.53 0.00 36.40 3.51
3568 3787 3.117171 CAGCGTGGCTCTGAGTGC 61.117 66.667 6.53 0.00 36.40 4.40
3569 3788 3.619767 AGCGTGGCTCTGAGTGCA 61.620 61.111 8.86 0.00 30.62 4.57
3570 3789 2.666190 GCGTGGCTCTGAGTGCAA 60.666 61.111 8.86 0.00 0.00 4.08
3571 3790 2.037136 GCGTGGCTCTGAGTGCAAT 61.037 57.895 8.86 0.00 0.00 3.56
3572 3791 1.975363 GCGTGGCTCTGAGTGCAATC 61.975 60.000 7.33 7.33 0.00 2.67
3573 3792 0.671472 CGTGGCTCTGAGTGCAATCA 60.671 55.000 16.99 16.99 0.00 2.57
3574 3793 1.085091 GTGGCTCTGAGTGCAATCAG 58.915 55.000 32.76 32.76 46.70 2.90
3581 3800 2.768253 TGAGTGCAATCAGAACCGAT 57.232 45.000 13.76 0.00 0.00 4.18
3582 3801 3.885724 TGAGTGCAATCAGAACCGATA 57.114 42.857 13.76 0.00 0.00 2.92
3583 3802 3.785486 TGAGTGCAATCAGAACCGATAG 58.215 45.455 13.76 0.00 0.00 2.08
3584 3803 2.541762 GAGTGCAATCAGAACCGATAGC 59.458 50.000 9.72 0.00 0.00 2.97
3585 3804 2.169352 AGTGCAATCAGAACCGATAGCT 59.831 45.455 0.00 0.00 0.00 3.32
3586 3805 2.286294 GTGCAATCAGAACCGATAGCTG 59.714 50.000 0.00 0.00 0.00 4.24
3587 3806 2.168313 TGCAATCAGAACCGATAGCTGA 59.832 45.455 0.00 0.00 42.25 4.26
3588 3807 2.799412 GCAATCAGAACCGATAGCTGAG 59.201 50.000 0.00 0.00 41.45 3.35
3589 3808 2.799412 CAATCAGAACCGATAGCTGAGC 59.201 50.000 0.00 0.00 41.45 4.26
3590 3809 1.769026 TCAGAACCGATAGCTGAGCT 58.231 50.000 13.25 13.25 43.41 4.09
3591 3810 2.103373 TCAGAACCGATAGCTGAGCTT 58.897 47.619 14.14 0.00 40.44 3.74
3592 3811 2.159184 TCAGAACCGATAGCTGAGCTTG 60.159 50.000 14.14 1.64 40.44 4.01
3593 3812 1.137872 AGAACCGATAGCTGAGCTTGG 59.862 52.381 14.14 15.09 40.44 3.61
3594 3813 0.179000 AACCGATAGCTGAGCTTGGG 59.821 55.000 14.14 14.12 40.44 4.12
3595 3814 0.978146 ACCGATAGCTGAGCTTGGGT 60.978 55.000 14.14 14.81 40.44 4.51
3596 3815 0.179000 CCGATAGCTGAGCTTGGGTT 59.821 55.000 14.14 0.00 40.44 4.11
3597 3816 1.407437 CCGATAGCTGAGCTTGGGTTT 60.407 52.381 14.14 0.00 40.44 3.27
3598 3817 1.936547 CGATAGCTGAGCTTGGGTTTC 59.063 52.381 14.14 0.00 40.44 2.78
3599 3818 2.419297 CGATAGCTGAGCTTGGGTTTCT 60.419 50.000 14.14 0.00 40.44 2.52
3600 3819 2.479566 TAGCTGAGCTTGGGTTTCTG 57.520 50.000 14.14 0.00 40.44 3.02
3601 3820 0.251077 AGCTGAGCTTGGGTTTCTGG 60.251 55.000 0.00 0.00 33.89 3.86
3602 3821 1.871126 GCTGAGCTTGGGTTTCTGGC 61.871 60.000 0.00 0.00 0.00 4.85
3603 3822 1.228552 TGAGCTTGGGTTTCTGGCC 60.229 57.895 0.00 0.00 0.00 5.36
3604 3823 2.282462 AGCTTGGGTTTCTGGCCG 60.282 61.111 0.00 0.00 0.00 6.13
3605 3824 2.282180 GCTTGGGTTTCTGGCCGA 60.282 61.111 0.00 0.00 0.00 5.54
3606 3825 1.678970 GCTTGGGTTTCTGGCCGAT 60.679 57.895 0.00 0.00 0.00 4.18
3607 3826 1.250840 GCTTGGGTTTCTGGCCGATT 61.251 55.000 0.00 0.00 0.00 3.34
3608 3827 1.256812 CTTGGGTTTCTGGCCGATTT 58.743 50.000 0.00 0.00 0.00 2.17
3609 3828 0.965439 TTGGGTTTCTGGCCGATTTG 59.035 50.000 0.00 0.00 0.00 2.32
3610 3829 1.215382 GGGTTTCTGGCCGATTTGC 59.785 57.895 0.00 0.00 0.00 3.68
3611 3830 1.250840 GGGTTTCTGGCCGATTTGCT 61.251 55.000 0.00 0.00 0.00 3.91
3612 3831 1.459450 GGTTTCTGGCCGATTTGCTA 58.541 50.000 0.00 0.00 0.00 3.49
3613 3832 2.024414 GGTTTCTGGCCGATTTGCTAT 58.976 47.619 0.00 0.00 0.00 2.97
3614 3833 2.033424 GGTTTCTGGCCGATTTGCTATC 59.967 50.000 0.00 0.00 0.00 2.08
3615 3834 2.682856 GTTTCTGGCCGATTTGCTATCA 59.317 45.455 0.00 0.00 0.00 2.15
3616 3835 1.953559 TCTGGCCGATTTGCTATCAC 58.046 50.000 0.00 0.00 0.00 3.06
3617 3836 1.209261 TCTGGCCGATTTGCTATCACA 59.791 47.619 0.00 0.00 0.00 3.58
3618 3837 1.600957 CTGGCCGATTTGCTATCACAG 59.399 52.381 0.00 0.00 0.00 3.66
3619 3838 1.065491 TGGCCGATTTGCTATCACAGT 60.065 47.619 0.00 0.00 0.00 3.55
3620 3839 1.331756 GGCCGATTTGCTATCACAGTG 59.668 52.381 0.00 0.00 0.00 3.66
3621 3840 2.279741 GCCGATTTGCTATCACAGTGA 58.720 47.619 5.50 5.50 0.00 3.41
3622 3841 2.874701 GCCGATTTGCTATCACAGTGAT 59.125 45.455 20.04 20.04 40.72 3.06
3623 3842 3.313526 GCCGATTTGCTATCACAGTGATT 59.686 43.478 21.30 1.94 38.26 2.57
3624 3843 4.201950 GCCGATTTGCTATCACAGTGATTT 60.202 41.667 21.30 1.33 38.26 2.17
3625 3844 5.677091 GCCGATTTGCTATCACAGTGATTTT 60.677 40.000 21.30 0.54 38.26 1.82
3626 3845 5.740569 CCGATTTGCTATCACAGTGATTTTG 59.259 40.000 21.30 12.61 38.26 2.44
3627 3846 5.740569 CGATTTGCTATCACAGTGATTTTGG 59.259 40.000 21.30 10.36 38.26 3.28
3628 3847 4.439305 TTGCTATCACAGTGATTTTGGC 57.561 40.909 21.30 18.39 38.26 4.52
3629 3848 3.419943 TGCTATCACAGTGATTTTGGCA 58.580 40.909 21.30 20.34 38.26 4.92
3630 3849 3.441222 TGCTATCACAGTGATTTTGGCAG 59.559 43.478 21.30 12.12 38.26 4.85
3631 3850 3.733077 GCTATCACAGTGATTTTGGCAGC 60.733 47.826 21.30 17.65 38.26 5.25
3632 3851 0.592637 TCACAGTGATTTTGGCAGCG 59.407 50.000 0.00 0.00 0.00 5.18
3633 3852 0.311790 CACAGTGATTTTGGCAGCGT 59.688 50.000 0.00 0.00 0.00 5.07
3634 3853 1.535028 CACAGTGATTTTGGCAGCGTA 59.465 47.619 0.00 0.00 0.00 4.42
3635 3854 1.535462 ACAGTGATTTTGGCAGCGTAC 59.465 47.619 0.00 0.00 0.00 3.67
3636 3855 1.535028 CAGTGATTTTGGCAGCGTACA 59.465 47.619 0.00 0.00 0.00 2.90
3637 3856 1.806542 AGTGATTTTGGCAGCGTACAG 59.193 47.619 0.00 0.00 0.00 2.74
3648 3867 4.135153 CGTACAGCAGAGCGGGCT 62.135 66.667 0.00 0.00 43.77 5.19
3653 3872 4.385405 AGCAGAGCGGGCTGTGAC 62.385 66.667 20.46 11.82 40.80 3.67
3662 3881 4.787735 GGCTGTGACCCTAGGAGA 57.212 61.111 11.48 0.00 0.00 3.71
3663 3882 2.992476 GGCTGTGACCCTAGGAGAA 58.008 57.895 11.48 0.00 0.00 2.87
3664 3883 1.501582 GGCTGTGACCCTAGGAGAAT 58.498 55.000 11.48 0.00 0.00 2.40
3665 3884 1.139853 GGCTGTGACCCTAGGAGAATG 59.860 57.143 11.48 0.00 0.00 2.67
3666 3885 1.139853 GCTGTGACCCTAGGAGAATGG 59.860 57.143 11.48 0.00 0.00 3.16
3667 3886 1.139853 CTGTGACCCTAGGAGAATGGC 59.860 57.143 11.48 0.00 0.00 4.40
3668 3887 0.470341 GTGACCCTAGGAGAATGGCC 59.530 60.000 11.48 0.00 0.00 5.36
3669 3888 0.044092 TGACCCTAGGAGAATGGCCA 59.956 55.000 8.56 8.56 0.00 5.36
3670 3889 1.345422 TGACCCTAGGAGAATGGCCAT 60.345 52.381 14.09 14.09 0.00 4.40
3671 3890 1.349357 GACCCTAGGAGAATGGCCATC 59.651 57.143 21.08 12.71 0.00 3.51
3672 3891 1.345422 ACCCTAGGAGAATGGCCATCA 60.345 52.381 21.08 0.00 0.00 3.07
3673 3892 1.991070 CCCTAGGAGAATGGCCATCAT 59.009 52.381 21.08 10.87 37.79 2.45
3674 3893 2.026449 CCCTAGGAGAATGGCCATCATC 60.026 54.545 21.08 19.09 34.44 2.92
3675 3894 2.641321 CCTAGGAGAATGGCCATCATCA 59.359 50.000 21.08 4.51 34.44 3.07
3676 3895 3.073503 CCTAGGAGAATGGCCATCATCAA 59.926 47.826 21.08 10.73 34.44 2.57
3677 3896 3.225177 AGGAGAATGGCCATCATCAAG 57.775 47.619 21.08 0.00 34.44 3.02
3678 3897 2.781757 AGGAGAATGGCCATCATCAAGA 59.218 45.455 21.08 0.00 34.44 3.02
3679 3898 3.398292 AGGAGAATGGCCATCATCAAGAT 59.602 43.478 21.08 0.00 37.48 2.40
3680 3899 3.757493 GGAGAATGGCCATCATCAAGATC 59.243 47.826 21.08 10.29 33.72 2.75
3681 3900 3.757493 GAGAATGGCCATCATCAAGATCC 59.243 47.826 21.08 1.00 33.72 3.36
3682 3901 3.398292 AGAATGGCCATCATCAAGATCCT 59.602 43.478 21.08 0.00 33.72 3.24
3683 3902 2.945080 TGGCCATCATCAAGATCCTC 57.055 50.000 0.00 0.00 33.72 3.71
3684 3903 1.071228 TGGCCATCATCAAGATCCTCG 59.929 52.381 0.00 0.00 33.72 4.63
3685 3904 1.071385 GGCCATCATCAAGATCCTCGT 59.929 52.381 0.00 0.00 33.72 4.18
3686 3905 2.411904 GCCATCATCAAGATCCTCGTC 58.588 52.381 0.00 0.00 33.72 4.20
3687 3906 2.869636 GCCATCATCAAGATCCTCGTCC 60.870 54.545 0.00 0.00 33.72 4.79
3688 3907 2.366590 CCATCATCAAGATCCTCGTCCA 59.633 50.000 0.00 0.00 33.72 4.02
3689 3908 3.181462 CCATCATCAAGATCCTCGTCCAA 60.181 47.826 0.00 0.00 33.72 3.53
3690 3909 4.445453 CATCATCAAGATCCTCGTCCAAA 58.555 43.478 0.00 0.00 33.72 3.28
3691 3910 4.760530 TCATCAAGATCCTCGTCCAAAT 57.239 40.909 0.00 0.00 0.00 2.32
3692 3911 4.697514 TCATCAAGATCCTCGTCCAAATC 58.302 43.478 0.00 0.00 0.00 2.17
3693 3912 4.162131 TCATCAAGATCCTCGTCCAAATCA 59.838 41.667 0.00 0.00 0.00 2.57
3694 3913 3.861840 TCAAGATCCTCGTCCAAATCAC 58.138 45.455 0.00 0.00 0.00 3.06
3695 3914 2.939103 CAAGATCCTCGTCCAAATCACC 59.061 50.000 0.00 0.00 0.00 4.02
3696 3915 2.187958 AGATCCTCGTCCAAATCACCA 58.812 47.619 0.00 0.00 0.00 4.17
3697 3916 2.774234 AGATCCTCGTCCAAATCACCAT 59.226 45.455 0.00 0.00 0.00 3.55
3698 3917 2.401583 TCCTCGTCCAAATCACCATG 57.598 50.000 0.00 0.00 0.00 3.66
3699 3918 0.734889 CCTCGTCCAAATCACCATGC 59.265 55.000 0.00 0.00 0.00 4.06
3700 3919 1.679944 CCTCGTCCAAATCACCATGCT 60.680 52.381 0.00 0.00 0.00 3.79
3701 3920 1.667724 CTCGTCCAAATCACCATGCTC 59.332 52.381 0.00 0.00 0.00 4.26
3702 3921 0.734889 CGTCCAAATCACCATGCTCC 59.265 55.000 0.00 0.00 0.00 4.70
3703 3922 0.734889 GTCCAAATCACCATGCTCCG 59.265 55.000 0.00 0.00 0.00 4.63
3704 3923 0.394216 TCCAAATCACCATGCTCCGG 60.394 55.000 0.00 0.00 0.00 5.14
3705 3924 1.434696 CAAATCACCATGCTCCGGC 59.565 57.895 0.00 0.00 39.26 6.13
3716 3935 2.121291 TGCTCCGGCATAATTTGTCA 57.879 45.000 0.00 0.00 44.28 3.58
3717 3936 1.742831 TGCTCCGGCATAATTTGTCAC 59.257 47.619 0.00 0.00 44.28 3.67
3718 3937 1.268032 GCTCCGGCATAATTTGTCACG 60.268 52.381 0.00 0.00 38.54 4.35
3719 3938 0.730265 TCCGGCATAATTTGTCACGC 59.270 50.000 0.00 0.00 0.00 5.34
3720 3939 0.248458 CCGGCATAATTTGTCACGCC 60.248 55.000 0.00 0.00 36.16 5.68
3721 3940 0.732571 CGGCATAATTTGTCACGCCT 59.267 50.000 0.00 0.00 37.39 5.52
3722 3941 1.531677 CGGCATAATTTGTCACGCCTG 60.532 52.381 0.00 0.00 37.39 4.85
3723 3942 1.742831 GGCATAATTTGTCACGCCTGA 59.257 47.619 0.00 0.00 36.58 3.86
3724 3943 2.163412 GGCATAATTTGTCACGCCTGAA 59.837 45.455 0.00 0.00 36.58 3.02
3725 3944 3.181487 GGCATAATTTGTCACGCCTGAAT 60.181 43.478 0.00 0.00 36.58 2.57
3726 3945 4.423732 GCATAATTTGTCACGCCTGAATT 58.576 39.130 0.00 0.00 0.00 2.17
3727 3946 5.449862 GGCATAATTTGTCACGCCTGAATTA 60.450 40.000 0.00 0.00 36.58 1.40
3728 3947 6.033341 GCATAATTTGTCACGCCTGAATTAA 58.967 36.000 0.00 0.00 0.00 1.40
3729 3948 6.197096 GCATAATTTGTCACGCCTGAATTAAG 59.803 38.462 0.00 0.00 0.00 1.85
3730 3949 3.552604 TTTGTCACGCCTGAATTAAGC 57.447 42.857 0.00 0.00 0.00 3.09
3731 3950 2.177394 TGTCACGCCTGAATTAAGCA 57.823 45.000 0.00 0.00 0.00 3.91
3732 3951 2.499197 TGTCACGCCTGAATTAAGCAA 58.501 42.857 0.00 0.00 0.00 3.91
3733 3952 3.081061 TGTCACGCCTGAATTAAGCAAT 58.919 40.909 0.00 0.00 0.00 3.56
3734 3953 3.505680 TGTCACGCCTGAATTAAGCAATT 59.494 39.130 0.00 0.00 37.06 2.32
3735 3954 4.697828 TGTCACGCCTGAATTAAGCAATTA 59.302 37.500 0.00 0.00 34.44 1.40
3736 3955 5.182190 TGTCACGCCTGAATTAAGCAATTAA 59.818 36.000 0.00 0.00 34.44 1.40
3737 3956 6.090129 GTCACGCCTGAATTAAGCAATTAAA 58.910 36.000 0.00 0.00 34.44 1.52
3738 3957 6.251376 GTCACGCCTGAATTAAGCAATTAAAG 59.749 38.462 0.00 0.00 34.44 1.85
3739 3958 5.516339 CACGCCTGAATTAAGCAATTAAAGG 59.484 40.000 6.44 6.44 39.22 3.11
3740 3959 5.417580 ACGCCTGAATTAAGCAATTAAAGGA 59.582 36.000 11.87 0.00 38.88 3.36
3741 3960 6.096846 ACGCCTGAATTAAGCAATTAAAGGAT 59.903 34.615 11.87 1.49 38.88 3.24
3742 3961 7.284489 ACGCCTGAATTAAGCAATTAAAGGATA 59.716 33.333 11.87 0.00 38.88 2.59
3743 3962 8.299570 CGCCTGAATTAAGCAATTAAAGGATAT 58.700 33.333 11.87 0.00 38.88 1.63
3744 3963 9.987272 GCCTGAATTAAGCAATTAAAGGATATT 57.013 29.630 11.87 0.00 38.88 1.28
3762 3981 8.724113 AGGATATTAAGGTTAGGAACTACTCC 57.276 38.462 0.00 0.00 42.67 3.85
3773 3992 4.813296 GGAACTACTCCGGCATAATTTG 57.187 45.455 0.00 0.00 33.37 2.32
3774 3993 4.196971 GGAACTACTCCGGCATAATTTGT 58.803 43.478 0.00 0.00 33.37 2.83
3775 3994 4.272748 GGAACTACTCCGGCATAATTTGTC 59.727 45.833 0.00 0.00 33.37 3.18
3776 3995 4.481368 ACTACTCCGGCATAATTTGTCA 57.519 40.909 0.00 0.00 0.00 3.58
3777 3996 5.036117 ACTACTCCGGCATAATTTGTCAT 57.964 39.130 0.00 0.00 0.00 3.06
3778 3997 4.816385 ACTACTCCGGCATAATTTGTCATG 59.184 41.667 0.00 0.00 0.00 3.07
3779 3998 2.358898 ACTCCGGCATAATTTGTCATGC 59.641 45.455 0.00 2.81 45.47 4.06
3780 3999 2.620115 CTCCGGCATAATTTGTCATGCT 59.380 45.455 10.03 0.00 45.50 3.79
3781 4000 2.618241 TCCGGCATAATTTGTCATGCTC 59.382 45.455 10.03 1.70 45.50 4.26
3782 4001 2.620115 CCGGCATAATTTGTCATGCTCT 59.380 45.455 10.03 0.00 45.50 4.09
3783 4002 3.814842 CCGGCATAATTTGTCATGCTCTA 59.185 43.478 10.03 0.00 45.50 2.43
3784 4003 4.275689 CCGGCATAATTTGTCATGCTCTAA 59.724 41.667 10.03 0.00 45.50 2.10
3785 4004 5.207768 CGGCATAATTTGTCATGCTCTAAC 58.792 41.667 10.03 0.00 45.50 2.34
3786 4005 5.008019 CGGCATAATTTGTCATGCTCTAACT 59.992 40.000 10.03 0.00 45.50 2.24
3787 4006 6.458751 CGGCATAATTTGTCATGCTCTAACTT 60.459 38.462 10.03 0.00 45.50 2.66
3788 4007 7.260603 GGCATAATTTGTCATGCTCTAACTTT 58.739 34.615 10.03 0.00 45.50 2.66
3789 4008 7.761249 GGCATAATTTGTCATGCTCTAACTTTT 59.239 33.333 10.03 0.00 45.50 2.27
3790 4009 9.143631 GCATAATTTGTCATGCTCTAACTTTTT 57.856 29.630 4.05 0.00 43.38 1.94
3816 4035 3.773370 GGAGACACCCACGTCTGA 58.227 61.111 0.00 0.00 46.26 3.27
3817 4036 1.587054 GGAGACACCCACGTCTGAG 59.413 63.158 0.00 0.00 46.26 3.35
3818 4037 1.179814 GGAGACACCCACGTCTGAGT 61.180 60.000 0.00 0.00 46.26 3.41
3819 4038 0.674534 GAGACACCCACGTCTGAGTT 59.325 55.000 0.00 0.00 46.26 3.01
3820 4039 1.068741 GAGACACCCACGTCTGAGTTT 59.931 52.381 0.00 0.00 46.26 2.66
3821 4040 1.485066 AGACACCCACGTCTGAGTTTT 59.515 47.619 0.00 0.00 44.59 2.43
3822 4041 2.093128 AGACACCCACGTCTGAGTTTTT 60.093 45.455 0.00 0.00 44.59 1.94
3845 4064 5.987777 TTTATTGAACACGAAAGGAACGA 57.012 34.783 0.00 0.00 34.70 3.85
3846 4065 6.548441 TTTATTGAACACGAAAGGAACGAT 57.452 33.333 0.00 0.00 34.70 3.73
3847 4066 6.548441 TTATTGAACACGAAAGGAACGATT 57.452 33.333 0.00 0.00 34.70 3.34
3848 4067 7.655236 TTATTGAACACGAAAGGAACGATTA 57.345 32.000 0.00 0.00 34.70 1.75
3849 4068 6.737254 ATTGAACACGAAAGGAACGATTAT 57.263 33.333 0.00 0.00 34.70 1.28
3850 4069 6.548441 TTGAACACGAAAGGAACGATTATT 57.452 33.333 0.00 0.00 34.70 1.40
3851 4070 6.160664 TGAACACGAAAGGAACGATTATTC 57.839 37.500 0.00 0.00 34.70 1.75
3852 4071 5.929992 TGAACACGAAAGGAACGATTATTCT 59.070 36.000 0.00 0.00 34.70 2.40
3853 4072 6.425721 TGAACACGAAAGGAACGATTATTCTT 59.574 34.615 0.00 0.00 34.70 2.52
3854 4073 6.165659 ACACGAAAGGAACGATTATTCTTG 57.834 37.500 0.00 0.00 34.70 3.02
3855 4074 5.929992 ACACGAAAGGAACGATTATTCTTGA 59.070 36.000 0.00 0.00 34.70 3.02
3856 4075 6.090898 ACACGAAAGGAACGATTATTCTTGAG 59.909 38.462 0.00 0.00 34.70 3.02
3857 4076 6.090898 CACGAAAGGAACGATTATTCTTGAGT 59.909 38.462 0.00 0.00 34.70 3.41
3858 4077 6.649557 ACGAAAGGAACGATTATTCTTGAGTT 59.350 34.615 0.00 0.00 34.70 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.010420 GACAGTAATGAAGACCAAGGGC 58.990 50.000 0.00 0.00 0.00 5.19
1 2 3.262420 CGACAGTAATGAAGACCAAGGG 58.738 50.000 0.00 0.00 0.00 3.95
2 3 2.673368 GCGACAGTAATGAAGACCAAGG 59.327 50.000 0.00 0.00 0.00 3.61
3 4 2.673368 GGCGACAGTAATGAAGACCAAG 59.327 50.000 0.00 0.00 0.00 3.61
4 5 2.037902 TGGCGACAGTAATGAAGACCAA 59.962 45.455 0.00 0.00 35.01 3.67
5 6 1.621317 TGGCGACAGTAATGAAGACCA 59.379 47.619 0.00 0.00 35.01 4.02
6 7 2.380084 TGGCGACAGTAATGAAGACC 57.620 50.000 0.00 0.00 35.01 3.85
19 20 3.300009 CAAAAGTTTCAGTCATGGCGAC 58.700 45.455 0.00 0.00 45.77 5.19
20 21 2.287547 GCAAAAGTTTCAGTCATGGCGA 60.288 45.455 0.00 0.00 0.00 5.54
21 22 2.053627 GCAAAAGTTTCAGTCATGGCG 58.946 47.619 0.00 0.00 0.00 5.69
22 23 3.054878 CTGCAAAAGTTTCAGTCATGGC 58.945 45.455 0.00 0.00 0.00 4.40
23 24 4.572985 TCTGCAAAAGTTTCAGTCATGG 57.427 40.909 0.00 0.00 0.00 3.66
24 25 5.107607 GCATTCTGCAAAAGTTTCAGTCATG 60.108 40.000 4.70 8.50 44.26 3.07
25 26 4.986659 GCATTCTGCAAAAGTTTCAGTCAT 59.013 37.500 4.70 0.00 44.26 3.06
26 27 4.362279 GCATTCTGCAAAAGTTTCAGTCA 58.638 39.130 4.70 0.00 44.26 3.41
27 28 4.961433 GCATTCTGCAAAAGTTTCAGTC 57.039 40.909 4.70 0.00 44.26 3.51
40 41 4.189188 CGGCCTGCTGCATTCTGC 62.189 66.667 1.31 3.93 45.29 4.26
41 42 0.816825 ATACGGCCTGCTGCATTCTG 60.817 55.000 1.31 5.69 43.89 3.02
42 43 0.107017 AATACGGCCTGCTGCATTCT 60.107 50.000 1.31 0.00 43.89 2.40
43 44 1.532868 CTAATACGGCCTGCTGCATTC 59.467 52.381 1.31 0.00 43.89 2.67
44 45 1.597742 CTAATACGGCCTGCTGCATT 58.402 50.000 1.31 0.00 43.89 3.56
45 46 0.886490 GCTAATACGGCCTGCTGCAT 60.886 55.000 1.31 0.00 43.89 3.96
46 47 1.523711 GCTAATACGGCCTGCTGCA 60.524 57.895 0.00 0.88 43.89 4.41
47 48 0.886490 ATGCTAATACGGCCTGCTGC 60.886 55.000 0.00 0.00 40.16 5.25
48 49 2.341257 CTATGCTAATACGGCCTGCTG 58.659 52.381 0.00 0.00 0.00 4.41
49 50 1.338200 GCTATGCTAATACGGCCTGCT 60.338 52.381 0.00 0.00 0.00 4.24
50 51 1.079503 GCTATGCTAATACGGCCTGC 58.920 55.000 0.00 0.00 0.00 4.85
51 52 2.455674 TGCTATGCTAATACGGCCTG 57.544 50.000 0.00 0.00 0.00 4.85
52 53 2.834549 AGATGCTATGCTAATACGGCCT 59.165 45.455 0.00 0.00 0.00 5.19
53 54 3.252974 AGATGCTATGCTAATACGGCC 57.747 47.619 0.00 0.00 0.00 6.13
54 55 6.042777 TCAATAGATGCTATGCTAATACGGC 58.957 40.000 0.00 0.00 0.00 5.68
55 56 8.654230 AATCAATAGATGCTATGCTAATACGG 57.346 34.615 0.00 0.00 33.90 4.02
68 69 9.226345 GTGCTACAACTTAAAATCAATAGATGC 57.774 33.333 0.00 0.00 33.90 3.91
85 86 4.151867 GCTACAGTAGTTTGGTGCTACAAC 59.848 45.833 9.42 0.00 40.76 3.32
86 87 4.039973 AGCTACAGTAGTTTGGTGCTACAA 59.960 41.667 9.42 0.00 40.76 2.41
94 95 8.723942 AATTCTATCAAGCTACAGTAGTTTGG 57.276 34.615 27.62 16.78 44.16 3.28
102 103 8.948631 TGAGGTAAAATTCTATCAAGCTACAG 57.051 34.615 0.00 0.00 0.00 2.74
104 105 8.204836 TCCTGAGGTAAAATTCTATCAAGCTAC 58.795 37.037 0.00 0.00 0.00 3.58
123 127 0.529337 CAGCGCATAGTGTCCTGAGG 60.529 60.000 11.47 0.00 0.00 3.86
157 165 4.395542 GTCTGTAACTGGTAGTCGTGAGAT 59.604 45.833 0.00 0.00 45.19 2.75
164 172 9.310716 GTATATTTTGGTCTGTAACTGGTAGTC 57.689 37.037 0.00 0.00 0.00 2.59
191 199 3.838244 ATTTCCTGCGCTTATCTACCA 57.162 42.857 9.73 0.00 0.00 3.25
196 204 4.372656 AGTGAGTATTTCCTGCGCTTATC 58.627 43.478 9.73 0.00 0.00 1.75
214 222 3.660501 ATTGTTCGCTACAGTGAGTGA 57.339 42.857 0.00 0.00 38.19 3.41
215 223 4.732285 AAATTGTTCGCTACAGTGAGTG 57.268 40.909 0.00 0.00 38.19 3.51
216 224 5.065988 ACAAAAATTGTTCGCTACAGTGAGT 59.934 36.000 0.00 0.00 42.22 3.41
217 225 5.510671 ACAAAAATTGTTCGCTACAGTGAG 58.489 37.500 0.00 0.00 42.22 3.51
218 226 5.493133 ACAAAAATTGTTCGCTACAGTGA 57.507 34.783 0.00 0.00 42.22 3.41
221 229 7.569297 TGTACTACAAAAATTGTTCGCTACAG 58.431 34.615 0.54 0.00 42.22 2.74
228 236 7.589954 ACGAAGCATGTACTACAAAAATTGTTC 59.410 33.333 0.54 0.00 42.22 3.18
232 240 7.803189 CAGAACGAAGCATGTACTACAAAAATT 59.197 33.333 0.00 0.00 0.00 1.82
239 247 4.482386 TGACAGAACGAAGCATGTACTAC 58.518 43.478 0.00 0.00 0.00 2.73
240 248 4.776795 TGACAGAACGAAGCATGTACTA 57.223 40.909 0.00 0.00 0.00 1.82
241 249 3.660501 TGACAGAACGAAGCATGTACT 57.339 42.857 0.00 0.00 0.00 2.73
249 257 2.744202 CCAGGGAAATGACAGAACGAAG 59.256 50.000 0.00 0.00 0.00 3.79
253 261 2.558359 CCAACCAGGGAAATGACAGAAC 59.442 50.000 0.00 0.00 0.00 3.01
500 522 1.394618 GCGAGGATGGTAGACTCACT 58.605 55.000 0.00 0.00 0.00 3.41
508 530 2.762459 AAGGCGGCGAGGATGGTA 60.762 61.111 12.98 0.00 0.00 3.25
512 534 3.854669 CAGGAAGGCGGCGAGGAT 61.855 66.667 12.98 0.00 0.00 3.24
745 767 2.370445 CCCGTCCTTGAGCCTCCAT 61.370 63.158 0.00 0.00 0.00 3.41
754 776 2.110967 CAGCTGATGCCCGTCCTTG 61.111 63.158 8.42 0.00 40.80 3.61
818 841 7.398332 AGGATAAATCAGCTTTGGAAGAACAAT 59.602 33.333 0.00 0.00 0.00 2.71
837 860 8.441311 AGTATTATCAGGATGCAGAGGATAAA 57.559 34.615 13.43 5.00 35.01 1.40
913 942 8.273643 GTGACAAACAAATCACAAGACATAAG 57.726 34.615 0.00 0.00 43.89 1.73
958 989 6.480524 TCACCAAACTGATGAACTAAATCG 57.519 37.500 0.00 0.00 0.00 3.34
972 1003 1.688197 CCTGCACCAATTCACCAAACT 59.312 47.619 0.00 0.00 0.00 2.66
1193 1240 7.202016 ACGATCTTGAAAATCTTTGTAGCAA 57.798 32.000 0.00 0.00 0.00 3.91
1208 1255 8.092068 TCTGATTGGTAAACTAAACGATCTTGA 58.908 33.333 0.00 0.00 0.00 3.02
1237 1284 6.980593 TCACAAAACCATCATGAAAAGGTAG 58.019 36.000 15.59 11.88 33.15 3.18
1274 1329 2.123939 CACCACACCACCCAGCAA 60.124 61.111 0.00 0.00 0.00 3.91
1276 1331 3.429372 TTCCACCACACCACCCAGC 62.429 63.158 0.00 0.00 0.00 4.85
1277 1332 1.228245 CTTCCACCACACCACCCAG 60.228 63.158 0.00 0.00 0.00 4.45
1367 1534 9.479549 AGATATCTAAAAACACACCAATTCCAT 57.520 29.630 2.53 0.00 0.00 3.41
1400 1567 2.092429 TGTGATCCCCCAGTTAAGCATC 60.092 50.000 0.00 0.00 0.00 3.91
1402 1569 1.004277 GTGTGATCCCCCAGTTAAGCA 59.996 52.381 0.00 0.00 0.00 3.91
1403 1570 1.282157 AGTGTGATCCCCCAGTTAAGC 59.718 52.381 0.00 0.00 0.00 3.09
1473 1640 4.317291 GCGAATTAGTAACAACGCAAACAG 59.683 41.667 18.48 0.00 44.29 3.16
1500 1667 6.179906 AGTGGTATGTCAATCAGGGAATAG 57.820 41.667 0.00 0.00 0.00 1.73
1607 1775 1.280710 TCCCAACAATACACCAGCGAT 59.719 47.619 0.00 0.00 0.00 4.58
1618 1786 5.628797 AACAAACCTTGAATCCCAACAAT 57.371 34.783 0.00 0.00 0.00 2.71
1620 1788 5.423886 GAAAACAAACCTTGAATCCCAACA 58.576 37.500 0.00 0.00 0.00 3.33
1635 1803 6.580788 TCTGCAAATGATTCTGGAAAACAAA 58.419 32.000 0.00 0.00 0.00 2.83
1706 1875 4.971939 TGCACCATATACTGCACATACAT 58.028 39.130 2.96 0.00 38.49 2.29
1707 1876 4.100808 TCTGCACCATATACTGCACATACA 59.899 41.667 2.96 0.00 38.49 2.29
1708 1877 4.449068 GTCTGCACCATATACTGCACATAC 59.551 45.833 2.96 0.26 38.49 2.39
1711 1880 2.419990 GGTCTGCACCATATACTGCACA 60.420 50.000 2.96 0.00 43.17 4.57
1712 1881 2.213499 GGTCTGCACCATATACTGCAC 58.787 52.381 2.96 0.00 43.17 4.57
1713 1882 2.620251 GGTCTGCACCATATACTGCA 57.380 50.000 6.37 6.37 43.17 4.41
1785 1969 6.047870 ACACTTCATAATCAGCTGATCAGTC 58.952 40.000 28.83 15.41 32.75 3.51
1865 2051 1.198408 AGAATGTGTGACAGCAATGCG 59.802 47.619 0.00 0.00 0.00 4.73
2390 2600 1.298014 CTCAGTGGAGGGCAAGGAC 59.702 63.158 0.00 0.00 37.51 3.85
2395 2605 0.325933 CAATGACTCAGTGGAGGGCA 59.674 55.000 0.00 0.00 45.81 5.36
2396 2606 1.028868 GCAATGACTCAGTGGAGGGC 61.029 60.000 8.49 0.00 45.81 5.19
2432 2642 9.294614 AGAATGCTAAGAATGAGAAAGAAAACT 57.705 29.630 0.00 0.00 0.00 2.66
2433 2643 9.339492 CAGAATGCTAAGAATGAGAAAGAAAAC 57.661 33.333 0.00 0.00 0.00 2.43
2437 2647 9.458727 AATTCAGAATGCTAAGAATGAGAAAGA 57.541 29.630 0.00 0.00 34.76 2.52
2542 2754 4.951254 TGACGGAATTTTGTGACTAGTGA 58.049 39.130 0.00 0.00 0.00 3.41
2571 2783 9.950680 AATACCTTAATTGCACGATAAGAAATG 57.049 29.630 11.87 1.55 0.00 2.32
2685 2897 7.479150 TGTATTCATAATCATTGCTCGCAAAA 58.521 30.769 8.54 0.76 39.55 2.44
2728 2940 5.627182 ATCCTGCAACAGAGATAAGACAT 57.373 39.130 0.00 0.00 32.44 3.06
2815 3027 2.434336 TCAACCGATACTGGCTTAGCAT 59.566 45.455 6.53 0.00 0.00 3.79
2827 3039 5.577945 GGAACTGTAAACGAATCAACCGATA 59.422 40.000 0.00 0.00 0.00 2.92
2868 3080 2.310577 GACGCAGCATTGAACTTCAAC 58.689 47.619 6.35 0.00 39.45 3.18
2878 3090 2.042831 GCCTCTTGGACGCAGCATT 61.043 57.895 0.00 0.00 34.57 3.56
2922 3134 8.252417 TGGTATACAGAACTGCTAAAATTACGA 58.748 33.333 5.01 0.00 0.00 3.43
2991 3203 5.505181 AGTACCACTGTTCAAGATTCCAT 57.495 39.130 0.00 0.00 0.00 3.41
2994 3206 6.038997 AGGTAGTACCACTGTTCAAGATTC 57.961 41.667 21.49 0.00 41.95 2.52
2996 3208 4.466726 GGAGGTAGTACCACTGTTCAAGAT 59.533 45.833 21.49 0.00 41.95 2.40
3012 3226 4.648307 ACTAATAAACCAGGACGGAGGTAG 59.352 45.833 0.00 0.00 37.07 3.18
3013 3227 4.613437 ACTAATAAACCAGGACGGAGGTA 58.387 43.478 0.00 0.00 37.07 3.08
3014 3228 3.447950 ACTAATAAACCAGGACGGAGGT 58.552 45.455 0.00 0.00 40.61 3.85
3015 3229 3.181468 GGACTAATAAACCAGGACGGAGG 60.181 52.174 0.00 0.00 38.63 4.30
3016 3230 3.705072 AGGACTAATAAACCAGGACGGAG 59.295 47.826 0.00 0.00 38.63 4.63
3017 3231 3.703052 GAGGACTAATAAACCAGGACGGA 59.297 47.826 0.00 0.00 38.63 4.69
3018 3232 3.705072 AGAGGACTAATAAACCAGGACGG 59.295 47.826 0.00 0.00 42.50 4.79
3019 3233 5.340439 AAGAGGACTAATAAACCAGGACG 57.660 43.478 0.00 0.00 0.00 4.79
3020 3234 5.354513 GCAAAGAGGACTAATAAACCAGGAC 59.645 44.000 0.00 0.00 0.00 3.85
3021 3235 5.013704 TGCAAAGAGGACTAATAAACCAGGA 59.986 40.000 0.00 0.00 0.00 3.86
3022 3236 5.253330 TGCAAAGAGGACTAATAAACCAGG 58.747 41.667 0.00 0.00 0.00 4.45
3023 3237 7.337942 AGAATGCAAAGAGGACTAATAAACCAG 59.662 37.037 0.00 0.00 0.00 4.00
3024 3238 7.121168 CAGAATGCAAAGAGGACTAATAAACCA 59.879 37.037 0.00 0.00 0.00 3.67
3025 3239 7.121315 ACAGAATGCAAAGAGGACTAATAAACC 59.879 37.037 0.00 0.00 42.53 3.27
3026 3240 7.965107 CACAGAATGCAAAGAGGACTAATAAAC 59.035 37.037 0.00 0.00 42.53 2.01
3027 3241 8.044060 CACAGAATGCAAAGAGGACTAATAAA 57.956 34.615 0.00 0.00 42.53 1.40
3028 3242 7.615582 CACAGAATGCAAAGAGGACTAATAA 57.384 36.000 0.00 0.00 42.53 1.40
3044 3258 4.634199 AGGTCAAAATTTGGCACAGAATG 58.366 39.130 12.62 0.00 42.39 2.67
3045 3259 4.961438 AGGTCAAAATTTGGCACAGAAT 57.039 36.364 12.62 0.00 42.39 2.40
3046 3260 4.751767 AAGGTCAAAATTTGGCACAGAA 57.248 36.364 12.62 0.00 42.39 3.02
3047 3261 5.860941 TTAAGGTCAAAATTTGGCACAGA 57.139 34.783 12.62 0.00 42.39 3.41
3048 3262 7.495135 AATTTAAGGTCAAAATTTGGCACAG 57.505 32.000 12.62 0.00 42.39 3.66
3049 3263 7.872113 AAATTTAAGGTCAAAATTTGGCACA 57.128 28.000 12.62 0.00 42.19 4.57
3050 3264 9.658475 GTTAAATTTAAGGTCAAAATTTGGCAC 57.342 29.630 12.62 1.03 43.10 5.01
3051 3265 9.620259 AGTTAAATTTAAGGTCAAAATTTGGCA 57.380 25.926 12.62 0.00 43.10 4.92
3120 3334 9.405587 CGTTGGATTTGTATTTGAACATAGTTT 57.594 29.630 0.00 0.00 0.00 2.66
3121 3335 8.788806 TCGTTGGATTTGTATTTGAACATAGTT 58.211 29.630 0.00 0.00 0.00 2.24
3122 3336 8.330466 TCGTTGGATTTGTATTTGAACATAGT 57.670 30.769 0.00 0.00 0.00 2.12
3196 3410 9.796120 CCCTTCGTATTTTATGCTAAATTTTGA 57.204 29.630 3.69 0.00 0.00 2.69
3197 3411 9.030301 CCCCTTCGTATTTTATGCTAAATTTTG 57.970 33.333 0.00 0.00 0.00 2.44
3198 3412 8.973182 TCCCCTTCGTATTTTATGCTAAATTTT 58.027 29.630 0.00 0.00 0.00 1.82
3199 3413 8.410912 GTCCCCTTCGTATTTTATGCTAAATTT 58.589 33.333 0.00 0.00 0.00 1.82
3200 3414 7.013942 GGTCCCCTTCGTATTTTATGCTAAATT 59.986 37.037 0.00 0.00 0.00 1.82
3201 3415 6.489022 GGTCCCCTTCGTATTTTATGCTAAAT 59.511 38.462 0.00 0.00 0.00 1.40
3202 3416 5.824097 GGTCCCCTTCGTATTTTATGCTAAA 59.176 40.000 0.00 0.00 0.00 1.85
3203 3417 5.104444 TGGTCCCCTTCGTATTTTATGCTAA 60.104 40.000 0.00 0.00 0.00 3.09
3204 3418 4.409574 TGGTCCCCTTCGTATTTTATGCTA 59.590 41.667 0.00 0.00 0.00 3.49
3205 3419 3.201266 TGGTCCCCTTCGTATTTTATGCT 59.799 43.478 0.00 0.00 0.00 3.79
3206 3420 3.547746 TGGTCCCCTTCGTATTTTATGC 58.452 45.455 0.00 0.00 0.00 3.14
3207 3421 7.811117 TTATTGGTCCCCTTCGTATTTTATG 57.189 36.000 0.00 0.00 0.00 1.90
3208 3422 7.286087 GGTTTATTGGTCCCCTTCGTATTTTAT 59.714 37.037 0.00 0.00 0.00 1.40
3209 3423 6.602803 GGTTTATTGGTCCCCTTCGTATTTTA 59.397 38.462 0.00 0.00 0.00 1.52
3210 3424 5.419788 GGTTTATTGGTCCCCTTCGTATTTT 59.580 40.000 0.00 0.00 0.00 1.82
3211 3425 4.951715 GGTTTATTGGTCCCCTTCGTATTT 59.048 41.667 0.00 0.00 0.00 1.40
3212 3426 4.018233 TGGTTTATTGGTCCCCTTCGTATT 60.018 41.667 0.00 0.00 0.00 1.89
3213 3427 3.524380 TGGTTTATTGGTCCCCTTCGTAT 59.476 43.478 0.00 0.00 0.00 3.06
3214 3428 2.911636 TGGTTTATTGGTCCCCTTCGTA 59.088 45.455 0.00 0.00 0.00 3.43
3215 3429 1.706305 TGGTTTATTGGTCCCCTTCGT 59.294 47.619 0.00 0.00 0.00 3.85
3216 3430 2.365582 CTGGTTTATTGGTCCCCTTCG 58.634 52.381 0.00 0.00 0.00 3.79
3217 3431 2.310647 TCCTGGTTTATTGGTCCCCTTC 59.689 50.000 0.00 0.00 0.00 3.46
3218 3432 2.042569 GTCCTGGTTTATTGGTCCCCTT 59.957 50.000 0.00 0.00 0.00 3.95
3219 3433 1.639108 GTCCTGGTTTATTGGTCCCCT 59.361 52.381 0.00 0.00 0.00 4.79
3220 3434 1.680860 CGTCCTGGTTTATTGGTCCCC 60.681 57.143 0.00 0.00 0.00 4.81
3221 3435 1.680860 CCGTCCTGGTTTATTGGTCCC 60.681 57.143 0.00 0.00 0.00 4.46
3222 3436 1.279846 TCCGTCCTGGTTTATTGGTCC 59.720 52.381 0.00 0.00 39.52 4.46
3223 3437 2.629051 CTCCGTCCTGGTTTATTGGTC 58.371 52.381 0.00 0.00 39.52 4.02
3224 3438 1.280998 CCTCCGTCCTGGTTTATTGGT 59.719 52.381 0.00 0.00 39.52 3.67
3225 3439 1.280998 ACCTCCGTCCTGGTTTATTGG 59.719 52.381 0.00 0.00 39.52 3.16
3226 3440 2.781681 ACCTCCGTCCTGGTTTATTG 57.218 50.000 0.00 0.00 39.52 1.90
3227 3441 3.447950 ACTACCTCCGTCCTGGTTTATT 58.552 45.455 0.00 0.00 39.52 1.40
3228 3442 3.111741 ACTACCTCCGTCCTGGTTTAT 57.888 47.619 0.00 0.00 39.52 1.40
3229 3443 2.610438 ACTACCTCCGTCCTGGTTTA 57.390 50.000 0.00 0.00 39.52 2.01
3230 3444 2.454538 CTACTACCTCCGTCCTGGTTT 58.545 52.381 0.00 0.00 39.52 3.27
3231 3445 1.959028 GCTACTACCTCCGTCCTGGTT 60.959 57.143 0.00 0.00 39.52 3.67
3232 3446 0.395448 GCTACTACCTCCGTCCTGGT 60.395 60.000 0.00 0.00 39.52 4.00
3233 3447 1.108132 GGCTACTACCTCCGTCCTGG 61.108 65.000 0.00 0.00 40.09 4.45
3234 3448 0.106619 AGGCTACTACCTCCGTCCTG 60.107 60.000 0.00 0.00 33.62 3.86
3235 3449 0.106619 CAGGCTACTACCTCCGTCCT 60.107 60.000 0.00 0.00 38.26 3.85
3236 3450 0.395448 ACAGGCTACTACCTCCGTCC 60.395 60.000 0.00 0.00 38.26 4.79
3237 3451 2.338577 TACAGGCTACTACCTCCGTC 57.661 55.000 0.00 0.00 38.26 4.79
3238 3452 2.814805 TTACAGGCTACTACCTCCGT 57.185 50.000 0.00 0.00 38.26 4.69
3239 3453 5.508657 GGTTTATTACAGGCTACTACCTCCG 60.509 48.000 0.00 0.00 38.26 4.63
3240 3454 5.601729 AGGTTTATTACAGGCTACTACCTCC 59.398 44.000 0.00 0.00 38.26 4.30
3241 3455 6.728089 AGGTTTATTACAGGCTACTACCTC 57.272 41.667 0.00 0.00 38.26 3.85
3242 3456 9.887862 TTATAGGTTTATTACAGGCTACTACCT 57.112 33.333 0.00 0.00 42.30 3.08
3245 3459 8.810041 GCCTTATAGGTTTATTACAGGCTACTA 58.190 37.037 0.00 0.00 37.80 1.82
3246 3460 7.256583 GGCCTTATAGGTTTATTACAGGCTACT 60.257 40.741 6.81 0.00 37.80 2.57
3247 3461 6.877855 GGCCTTATAGGTTTATTACAGGCTAC 59.122 42.308 6.81 0.00 37.80 3.58
3248 3462 6.013119 GGGCCTTATAGGTTTATTACAGGCTA 60.013 42.308 0.84 0.00 37.80 3.93
3249 3463 5.222068 GGGCCTTATAGGTTTATTACAGGCT 60.222 44.000 0.84 0.00 37.80 4.58
3258 3472 4.724798 ACATCACAGGGCCTTATAGGTTTA 59.275 41.667 1.32 0.00 37.80 2.01
3269 3483 1.907807 TGCCAAACATCACAGGGCC 60.908 57.895 0.00 0.00 43.96 5.80
3331 3549 8.760980 TTCTTCTTCTCTCCCACAATTAAAAA 57.239 30.769 0.00 0.00 0.00 1.94
3342 3560 5.427378 CTCCATCTTTTCTTCTTCTCTCCC 58.573 45.833 0.00 0.00 0.00 4.30
3363 3581 2.380084 TTACTGTGTGCCGATTCCTC 57.620 50.000 0.00 0.00 0.00 3.71
3458 3677 0.034670 ATCAGCCAGAACCCAAGCTC 60.035 55.000 0.00 0.00 31.93 4.09
3459 3678 0.407139 AATCAGCCAGAACCCAAGCT 59.593 50.000 0.00 0.00 35.52 3.74
3460 3679 1.067354 CAAATCAGCCAGAACCCAAGC 60.067 52.381 0.00 0.00 0.00 4.01
3461 3680 1.067354 GCAAATCAGCCAGAACCCAAG 60.067 52.381 0.00 0.00 0.00 3.61
3462 3681 0.968405 GCAAATCAGCCAGAACCCAA 59.032 50.000 0.00 0.00 0.00 4.12
3463 3682 0.112995 AGCAAATCAGCCAGAACCCA 59.887 50.000 0.00 0.00 34.23 4.51
3464 3683 2.128771 TAGCAAATCAGCCAGAACCC 57.871 50.000 0.00 0.00 34.23 4.11
3465 3684 3.696051 TGATTAGCAAATCAGCCAGAACC 59.304 43.478 0.00 0.00 45.17 3.62
3466 3685 4.970662 TGATTAGCAAATCAGCCAGAAC 57.029 40.909 0.00 0.00 45.17 3.01
3475 3694 3.126858 TGAAGCACCGTGATTAGCAAATC 59.873 43.478 1.15 0.00 41.69 2.17
3476 3695 3.081061 TGAAGCACCGTGATTAGCAAAT 58.919 40.909 1.15 0.00 0.00 2.32
3477 3696 2.499197 TGAAGCACCGTGATTAGCAAA 58.501 42.857 1.15 0.00 0.00 3.68
3478 3697 2.177394 TGAAGCACCGTGATTAGCAA 57.823 45.000 1.15 0.00 0.00 3.91
3479 3698 2.401583 ATGAAGCACCGTGATTAGCA 57.598 45.000 1.15 0.00 0.00 3.49
3480 3699 3.764885 AAATGAAGCACCGTGATTAGC 57.235 42.857 1.15 0.00 0.00 3.09
3481 3700 5.088739 GTCAAAATGAAGCACCGTGATTAG 58.911 41.667 1.15 0.00 0.00 1.73
3482 3701 4.517075 TGTCAAAATGAAGCACCGTGATTA 59.483 37.500 1.15 0.00 0.00 1.75
3483 3702 3.317711 TGTCAAAATGAAGCACCGTGATT 59.682 39.130 0.63 0.63 0.00 2.57
3484 3703 2.884012 TGTCAAAATGAAGCACCGTGAT 59.116 40.909 1.65 0.00 0.00 3.06
3485 3704 2.290367 CTGTCAAAATGAAGCACCGTGA 59.710 45.455 1.65 0.00 0.00 4.35
3486 3705 2.033299 ACTGTCAAAATGAAGCACCGTG 59.967 45.455 0.00 0.00 0.00 4.94
3487 3706 2.297701 ACTGTCAAAATGAAGCACCGT 58.702 42.857 0.00 0.00 0.00 4.83
3488 3707 3.044986 CAACTGTCAAAATGAAGCACCG 58.955 45.455 0.00 0.00 0.00 4.94
3489 3708 4.305989 TCAACTGTCAAAATGAAGCACC 57.694 40.909 0.00 0.00 0.00 5.01
3490 3709 4.614284 CGATCAACTGTCAAAATGAAGCAC 59.386 41.667 0.00 0.00 0.00 4.40
3491 3710 4.514816 TCGATCAACTGTCAAAATGAAGCA 59.485 37.500 0.00 0.00 0.00 3.91
3492 3711 5.034554 TCGATCAACTGTCAAAATGAAGC 57.965 39.130 0.00 0.00 0.00 3.86
3493 3712 5.084722 GCTCGATCAACTGTCAAAATGAAG 58.915 41.667 0.00 0.00 0.00 3.02
3494 3713 4.377328 CGCTCGATCAACTGTCAAAATGAA 60.377 41.667 0.00 0.00 0.00 2.57
3495 3714 3.123453 CGCTCGATCAACTGTCAAAATGA 59.877 43.478 0.00 0.00 0.00 2.57
3496 3715 3.410850 CGCTCGATCAACTGTCAAAATG 58.589 45.455 0.00 0.00 0.00 2.32
3497 3716 2.416547 CCGCTCGATCAACTGTCAAAAT 59.583 45.455 0.00 0.00 0.00 1.82
3498 3717 1.798223 CCGCTCGATCAACTGTCAAAA 59.202 47.619 0.00 0.00 0.00 2.44
3499 3718 1.428448 CCGCTCGATCAACTGTCAAA 58.572 50.000 0.00 0.00 0.00 2.69
3500 3719 0.389817 CCCGCTCGATCAACTGTCAA 60.390 55.000 0.00 0.00 0.00 3.18
3501 3720 1.215382 CCCGCTCGATCAACTGTCA 59.785 57.895 0.00 0.00 0.00 3.58
3502 3721 2.167861 GCCCGCTCGATCAACTGTC 61.168 63.158 0.00 0.00 0.00 3.51
3503 3722 2.125512 GCCCGCTCGATCAACTGT 60.126 61.111 0.00 0.00 0.00 3.55
3504 3723 2.892425 GGCCCGCTCGATCAACTG 60.892 66.667 0.00 0.00 0.00 3.16
3505 3724 4.514577 CGGCCCGCTCGATCAACT 62.515 66.667 0.00 0.00 0.00 3.16
3506 3725 4.814294 ACGGCCCGCTCGATCAAC 62.814 66.667 1.23 0.00 0.00 3.18
3507 3726 4.812476 CACGGCCCGCTCGATCAA 62.812 66.667 1.23 0.00 0.00 2.57
3526 3745 2.751436 CGCCTGTCCACCATTGGG 60.751 66.667 7.78 0.00 44.11 4.12
3527 3746 2.751436 CCGCCTGTCCACCATTGG 60.751 66.667 0.00 0.00 45.56 3.16
3528 3747 2.034066 ACCGCCTGTCCACCATTG 59.966 61.111 0.00 0.00 0.00 2.82
3529 3748 2.034066 CACCGCCTGTCCACCATT 59.966 61.111 0.00 0.00 0.00 3.16
3530 3749 2.927856 TCACCGCCTGTCCACCAT 60.928 61.111 0.00 0.00 0.00 3.55
3531 3750 3.936203 GTCACCGCCTGTCCACCA 61.936 66.667 0.00 0.00 0.00 4.17
3532 3751 3.936203 TGTCACCGCCTGTCCACC 61.936 66.667 0.00 0.00 0.00 4.61
3533 3752 2.665185 GTGTCACCGCCTGTCCAC 60.665 66.667 0.00 0.00 0.00 4.02
3534 3753 3.936203 GGTGTCACCGCCTGTCCA 61.936 66.667 6.18 0.00 38.28 4.02
3535 3754 3.883744 CTGGTGTCACCGCCTGTCC 62.884 68.421 17.27 0.00 42.58 4.02
3536 3755 2.357517 CTGGTGTCACCGCCTGTC 60.358 66.667 17.27 0.00 42.58 3.51
3537 3756 4.626081 GCTGGTGTCACCGCCTGT 62.626 66.667 21.17 0.00 42.58 4.00
3543 3762 4.626081 AGCCACGCTGGTGTCACC 62.626 66.667 15.64 15.64 42.80 4.02
3544 3763 3.044305 GAGCCACGCTGGTGTCAC 61.044 66.667 0.00 0.00 42.80 3.67
3545 3764 3.233980 AGAGCCACGCTGGTGTCA 61.234 61.111 6.02 0.00 42.80 3.58
3546 3765 2.740055 CAGAGCCACGCTGGTGTC 60.740 66.667 6.02 4.06 42.80 3.67
3547 3766 3.231889 CTCAGAGCCACGCTGGTGT 62.232 63.158 6.02 0.00 42.80 4.16
3548 3767 2.433838 CTCAGAGCCACGCTGGTG 60.434 66.667 6.02 0.00 39.88 4.17
3549 3768 2.919856 ACTCAGAGCCACGCTGGT 60.920 61.111 0.00 0.00 39.88 4.00
3550 3769 2.433838 CACTCAGAGCCACGCTGG 60.434 66.667 0.00 0.25 39.88 4.85
3551 3770 3.117171 GCACTCAGAGCCACGCTG 61.117 66.667 0.00 0.00 39.88 5.18
3552 3771 2.460662 ATTGCACTCAGAGCCACGCT 62.461 55.000 0.00 0.00 43.88 5.07
3553 3772 1.975363 GATTGCACTCAGAGCCACGC 61.975 60.000 0.00 0.00 0.00 5.34
3554 3773 0.671472 TGATTGCACTCAGAGCCACG 60.671 55.000 2.07 0.00 0.00 4.94
3555 3774 1.085091 CTGATTGCACTCAGAGCCAC 58.915 55.000 25.46 0.00 44.48 5.01
3556 3775 0.978907 TCTGATTGCACTCAGAGCCA 59.021 50.000 27.48 10.26 45.13 4.75
3557 3776 3.849002 TCTGATTGCACTCAGAGCC 57.151 52.632 27.48 0.00 45.13 4.70
3561 3780 2.084610 TCGGTTCTGATTGCACTCAG 57.915 50.000 24.13 24.13 43.33 3.35
3562 3781 2.768253 ATCGGTTCTGATTGCACTCA 57.232 45.000 6.58 6.58 0.00 3.41
3563 3782 2.541762 GCTATCGGTTCTGATTGCACTC 59.458 50.000 17.97 0.00 43.56 3.51
3564 3783 2.169352 AGCTATCGGTTCTGATTGCACT 59.831 45.455 22.30 7.17 45.54 4.40
3565 3784 2.286294 CAGCTATCGGTTCTGATTGCAC 59.714 50.000 22.30 3.13 45.54 4.57
3566 3785 2.168313 TCAGCTATCGGTTCTGATTGCA 59.832 45.455 22.30 7.17 45.54 4.08
3567 3786 2.799412 CTCAGCTATCGGTTCTGATTGC 59.201 50.000 16.11 16.11 44.14 3.56
3568 3787 2.799412 GCTCAGCTATCGGTTCTGATTG 59.201 50.000 0.00 0.00 36.41 2.67
3569 3788 2.697751 AGCTCAGCTATCGGTTCTGATT 59.302 45.455 0.00 0.00 36.99 2.57
3570 3789 2.315176 AGCTCAGCTATCGGTTCTGAT 58.685 47.619 0.00 0.00 36.99 2.90
3571 3790 1.769026 AGCTCAGCTATCGGTTCTGA 58.231 50.000 0.00 1.24 36.99 3.27
3572 3791 2.200067 CAAGCTCAGCTATCGGTTCTG 58.800 52.381 0.00 0.00 38.25 3.02
3573 3792 1.137872 CCAAGCTCAGCTATCGGTTCT 59.862 52.381 0.00 0.00 38.25 3.01
3574 3793 1.576356 CCAAGCTCAGCTATCGGTTC 58.424 55.000 0.00 0.00 38.25 3.62
3575 3794 0.179000 CCCAAGCTCAGCTATCGGTT 59.821 55.000 0.00 0.00 38.25 4.44
3576 3795 0.978146 ACCCAAGCTCAGCTATCGGT 60.978 55.000 0.00 2.53 38.25 4.69
3577 3796 0.179000 AACCCAAGCTCAGCTATCGG 59.821 55.000 0.00 1.78 38.25 4.18
3578 3797 1.936547 GAAACCCAAGCTCAGCTATCG 59.063 52.381 0.00 0.00 38.25 2.92
3579 3798 2.941720 CAGAAACCCAAGCTCAGCTATC 59.058 50.000 0.00 0.00 38.25 2.08
3580 3799 2.356535 CCAGAAACCCAAGCTCAGCTAT 60.357 50.000 0.00 0.00 38.25 2.97
3581 3800 1.003580 CCAGAAACCCAAGCTCAGCTA 59.996 52.381 0.00 0.00 38.25 3.32
3582 3801 0.251077 CCAGAAACCCAAGCTCAGCT 60.251 55.000 0.00 0.00 42.56 4.24
3583 3802 1.871126 GCCAGAAACCCAAGCTCAGC 61.871 60.000 0.00 0.00 0.00 4.26
3584 3803 1.246737 GGCCAGAAACCCAAGCTCAG 61.247 60.000 0.00 0.00 0.00 3.35
3585 3804 1.228552 GGCCAGAAACCCAAGCTCA 60.229 57.895 0.00 0.00 0.00 4.26
3586 3805 2.335712 CGGCCAGAAACCCAAGCTC 61.336 63.158 2.24 0.00 0.00 4.09
3587 3806 2.142292 ATCGGCCAGAAACCCAAGCT 62.142 55.000 2.24 0.00 0.00 3.74
3588 3807 1.250840 AATCGGCCAGAAACCCAAGC 61.251 55.000 2.24 0.00 0.00 4.01
3589 3808 1.067635 CAAATCGGCCAGAAACCCAAG 60.068 52.381 2.24 0.00 0.00 3.61
3590 3809 0.965439 CAAATCGGCCAGAAACCCAA 59.035 50.000 2.24 0.00 0.00 4.12
3591 3810 1.531739 GCAAATCGGCCAGAAACCCA 61.532 55.000 2.24 0.00 0.00 4.51
3592 3811 1.215382 GCAAATCGGCCAGAAACCC 59.785 57.895 2.24 0.00 0.00 4.11
3593 3812 1.459450 TAGCAAATCGGCCAGAAACC 58.541 50.000 2.24 0.00 0.00 3.27
3594 3813 2.682856 TGATAGCAAATCGGCCAGAAAC 59.317 45.455 2.24 0.00 0.00 2.78
3595 3814 2.682856 GTGATAGCAAATCGGCCAGAAA 59.317 45.455 2.24 0.00 0.00 2.52
3596 3815 2.288666 GTGATAGCAAATCGGCCAGAA 58.711 47.619 2.24 0.00 0.00 3.02
3597 3816 1.209261 TGTGATAGCAAATCGGCCAGA 59.791 47.619 2.24 0.78 0.00 3.86
3598 3817 1.600957 CTGTGATAGCAAATCGGCCAG 59.399 52.381 2.24 0.00 0.00 4.85
3599 3818 1.065491 ACTGTGATAGCAAATCGGCCA 60.065 47.619 2.24 0.00 0.00 5.36
3600 3819 1.331756 CACTGTGATAGCAAATCGGCC 59.668 52.381 0.32 0.00 0.00 6.13
3601 3820 2.279741 TCACTGTGATAGCAAATCGGC 58.720 47.619 6.36 0.00 0.00 5.54
3602 3821 5.490139 AAATCACTGTGATAGCAAATCGG 57.510 39.130 22.53 0.00 35.76 4.18
3603 3822 5.740569 CCAAAATCACTGTGATAGCAAATCG 59.259 40.000 22.53 6.76 35.76 3.34
3604 3823 5.517770 GCCAAAATCACTGTGATAGCAAATC 59.482 40.000 22.53 6.66 35.76 2.17
3605 3824 5.047164 TGCCAAAATCACTGTGATAGCAAAT 60.047 36.000 22.53 4.24 35.76 2.32
3606 3825 4.280425 TGCCAAAATCACTGTGATAGCAAA 59.720 37.500 22.53 5.92 35.76 3.68
3607 3826 3.825585 TGCCAAAATCACTGTGATAGCAA 59.174 39.130 22.53 11.35 35.76 3.91
3608 3827 3.419943 TGCCAAAATCACTGTGATAGCA 58.580 40.909 22.53 22.65 35.76 3.49
3609 3828 3.733077 GCTGCCAAAATCACTGTGATAGC 60.733 47.826 22.53 20.70 35.76 2.97
3610 3829 3.486375 CGCTGCCAAAATCACTGTGATAG 60.486 47.826 22.53 15.67 35.76 2.08
3611 3830 2.419673 CGCTGCCAAAATCACTGTGATA 59.580 45.455 22.53 6.16 35.76 2.15
3612 3831 1.200716 CGCTGCCAAAATCACTGTGAT 59.799 47.619 17.24 17.24 39.09 3.06
3613 3832 0.592637 CGCTGCCAAAATCACTGTGA 59.407 50.000 13.60 13.60 0.00 3.58
3614 3833 0.311790 ACGCTGCCAAAATCACTGTG 59.688 50.000 0.17 0.17 0.00 3.66
3615 3834 1.535462 GTACGCTGCCAAAATCACTGT 59.465 47.619 0.00 0.00 0.00 3.55
3616 3835 1.535028 TGTACGCTGCCAAAATCACTG 59.465 47.619 0.00 0.00 0.00 3.66
3617 3836 1.806542 CTGTACGCTGCCAAAATCACT 59.193 47.619 0.00 0.00 0.00 3.41
3618 3837 1.729149 GCTGTACGCTGCCAAAATCAC 60.729 52.381 0.00 0.00 34.09 3.06
3619 3838 0.521291 GCTGTACGCTGCCAAAATCA 59.479 50.000 0.00 0.00 34.09 2.57
3620 3839 0.521291 TGCTGTACGCTGCCAAAATC 59.479 50.000 10.27 0.00 40.11 2.17
3621 3840 0.523072 CTGCTGTACGCTGCCAAAAT 59.477 50.000 10.27 0.00 40.11 1.82
3622 3841 0.533978 TCTGCTGTACGCTGCCAAAA 60.534 50.000 10.27 0.00 40.11 2.44
3623 3842 0.950555 CTCTGCTGTACGCTGCCAAA 60.951 55.000 10.27 0.00 40.11 3.28
3624 3843 1.374631 CTCTGCTGTACGCTGCCAA 60.375 57.895 10.27 0.00 40.11 4.52
3625 3844 2.262603 CTCTGCTGTACGCTGCCA 59.737 61.111 10.27 0.00 40.11 4.92
3626 3845 3.191539 GCTCTGCTGTACGCTGCC 61.192 66.667 10.27 2.90 40.11 4.85
3627 3846 3.549150 CGCTCTGCTGTACGCTGC 61.549 66.667 10.27 5.11 40.11 5.25
3628 3847 2.882777 CCGCTCTGCTGTACGCTG 60.883 66.667 10.27 9.72 40.11 5.18
3629 3848 4.135153 CCCGCTCTGCTGTACGCT 62.135 66.667 10.27 0.00 40.11 5.07
3631 3850 4.135153 AGCCCGCTCTGCTGTACG 62.135 66.667 0.00 0.00 37.76 3.67
3636 3855 4.385405 GTCACAGCCCGCTCTGCT 62.385 66.667 2.59 0.00 40.41 4.24
3638 3857 4.767255 GGGTCACAGCCCGCTCTG 62.767 72.222 1.29 1.29 39.17 3.35
3645 3864 1.139853 CATTCTCCTAGGGTCACAGCC 59.860 57.143 9.46 0.00 35.59 4.85
3646 3865 1.139853 CCATTCTCCTAGGGTCACAGC 59.860 57.143 9.46 0.00 0.00 4.40
3647 3866 1.139853 GCCATTCTCCTAGGGTCACAG 59.860 57.143 9.46 0.00 0.00 3.66
3648 3867 1.204146 GCCATTCTCCTAGGGTCACA 58.796 55.000 9.46 0.00 0.00 3.58
3649 3868 0.470341 GGCCATTCTCCTAGGGTCAC 59.530 60.000 9.46 0.00 0.00 3.67
3650 3869 0.044092 TGGCCATTCTCCTAGGGTCA 59.956 55.000 9.46 0.00 31.45 4.02
3651 3870 1.349357 GATGGCCATTCTCCTAGGGTC 59.651 57.143 21.84 0.00 0.00 4.46
3652 3871 1.345422 TGATGGCCATTCTCCTAGGGT 60.345 52.381 21.84 0.00 0.00 4.34
3653 3872 1.438469 TGATGGCCATTCTCCTAGGG 58.562 55.000 21.84 0.00 0.00 3.53
3654 3873 2.641321 TGATGATGGCCATTCTCCTAGG 59.359 50.000 21.84 0.82 35.17 3.02
3655 3874 4.041321 TCTTGATGATGGCCATTCTCCTAG 59.959 45.833 21.84 17.13 35.17 3.02
3656 3875 3.975982 TCTTGATGATGGCCATTCTCCTA 59.024 43.478 21.84 9.37 35.17 2.94
3657 3876 2.781757 TCTTGATGATGGCCATTCTCCT 59.218 45.455 21.84 0.14 35.17 3.69
3658 3877 3.219176 TCTTGATGATGGCCATTCTCC 57.781 47.619 21.84 7.51 35.17 3.71
3659 3878 3.757493 GGATCTTGATGATGGCCATTCTC 59.243 47.826 21.84 19.09 35.17 2.87
3660 3879 3.398292 AGGATCTTGATGATGGCCATTCT 59.602 43.478 21.84 10.40 35.17 2.40
3661 3880 3.757493 GAGGATCTTGATGATGGCCATTC 59.243 47.826 21.84 15.20 35.17 2.67
3662 3881 3.764218 GAGGATCTTGATGATGGCCATT 58.236 45.455 21.84 4.19 35.17 3.16
3663 3882 2.290134 CGAGGATCTTGATGATGGCCAT 60.290 50.000 20.96 20.96 38.43 4.40
3664 3883 1.071228 CGAGGATCTTGATGATGGCCA 59.929 52.381 8.56 8.56 35.14 5.36
3665 3884 1.071385 ACGAGGATCTTGATGATGGCC 59.929 52.381 0.00 0.00 35.14 5.36
3666 3885 2.411904 GACGAGGATCTTGATGATGGC 58.588 52.381 0.00 0.00 35.14 4.40
3667 3886 2.366590 TGGACGAGGATCTTGATGATGG 59.633 50.000 0.00 0.00 35.14 3.51
3668 3887 3.740631 TGGACGAGGATCTTGATGATG 57.259 47.619 0.00 0.00 35.14 3.07
3669 3888 4.760530 TTTGGACGAGGATCTTGATGAT 57.239 40.909 0.00 0.00 38.27 2.45
3670 3889 4.162131 TGATTTGGACGAGGATCTTGATGA 59.838 41.667 0.00 0.00 0.00 2.92
3671 3890 4.272018 GTGATTTGGACGAGGATCTTGATG 59.728 45.833 0.00 0.00 0.00 3.07
3672 3891 4.446371 GTGATTTGGACGAGGATCTTGAT 58.554 43.478 0.00 0.00 0.00 2.57
3673 3892 3.369471 GGTGATTTGGACGAGGATCTTGA 60.369 47.826 0.00 0.00 0.00 3.02
3674 3893 2.939103 GGTGATTTGGACGAGGATCTTG 59.061 50.000 0.00 0.00 0.00 3.02
3675 3894 2.571653 TGGTGATTTGGACGAGGATCTT 59.428 45.455 0.00 0.00 0.00 2.40
3676 3895 2.187958 TGGTGATTTGGACGAGGATCT 58.812 47.619 0.00 0.00 0.00 2.75
3677 3896 2.691409 TGGTGATTTGGACGAGGATC 57.309 50.000 0.00 0.00 0.00 3.36
3678 3897 2.923121 CATGGTGATTTGGACGAGGAT 58.077 47.619 0.00 0.00 0.00 3.24
3679 3898 1.678728 GCATGGTGATTTGGACGAGGA 60.679 52.381 0.00 0.00 0.00 3.71
3680 3899 0.734889 GCATGGTGATTTGGACGAGG 59.265 55.000 0.00 0.00 0.00 4.63
3681 3900 1.667724 GAGCATGGTGATTTGGACGAG 59.332 52.381 0.00 0.00 0.00 4.18
3682 3901 1.678728 GGAGCATGGTGATTTGGACGA 60.679 52.381 0.00 0.00 0.00 4.20
3683 3902 0.734889 GGAGCATGGTGATTTGGACG 59.265 55.000 0.00 0.00 0.00 4.79
3684 3903 0.734889 CGGAGCATGGTGATTTGGAC 59.265 55.000 0.00 0.00 0.00 4.02
3685 3904 0.394216 CCGGAGCATGGTGATTTGGA 60.394 55.000 0.00 0.00 0.00 3.53
3686 3905 2.008268 GCCGGAGCATGGTGATTTGG 62.008 60.000 5.05 0.00 39.53 3.28
3687 3906 1.314534 TGCCGGAGCATGGTGATTTG 61.315 55.000 5.05 0.00 46.52 2.32
3688 3907 1.001020 TGCCGGAGCATGGTGATTT 60.001 52.632 5.05 0.00 46.52 2.17
3689 3908 2.676608 TGCCGGAGCATGGTGATT 59.323 55.556 5.05 0.00 46.52 2.57
3698 3917 1.268032 CGTGACAAATTATGCCGGAGC 60.268 52.381 5.05 0.00 40.48 4.70
3699 3918 1.268032 GCGTGACAAATTATGCCGGAG 60.268 52.381 5.05 0.00 0.00 4.63
3700 3919 0.730265 GCGTGACAAATTATGCCGGA 59.270 50.000 5.05 0.00 0.00 5.14
3701 3920 0.248458 GGCGTGACAAATTATGCCGG 60.248 55.000 0.00 0.00 39.02 6.13
3702 3921 3.234368 GGCGTGACAAATTATGCCG 57.766 52.632 0.00 0.00 39.02 5.69
3703 3922 1.742831 TCAGGCGTGACAAATTATGCC 59.257 47.619 4.68 1.49 46.88 4.40
3704 3923 3.485947 TTCAGGCGTGACAAATTATGC 57.514 42.857 8.96 0.00 30.10 3.14
3705 3924 6.197096 GCTTAATTCAGGCGTGACAAATTATG 59.803 38.462 8.96 12.80 30.10 1.90
3706 3925 6.127758 TGCTTAATTCAGGCGTGACAAATTAT 60.128 34.615 8.96 0.00 30.10 1.28
3707 3926 5.182190 TGCTTAATTCAGGCGTGACAAATTA 59.818 36.000 8.96 8.10 30.10 1.40
3708 3927 4.022416 TGCTTAATTCAGGCGTGACAAATT 60.022 37.500 8.96 9.08 30.10 1.82
3709 3928 3.505680 TGCTTAATTCAGGCGTGACAAAT 59.494 39.130 8.96 0.00 30.10 2.32
3710 3929 2.881513 TGCTTAATTCAGGCGTGACAAA 59.118 40.909 8.96 3.14 30.10 2.83
3711 3930 2.499197 TGCTTAATTCAGGCGTGACAA 58.501 42.857 8.96 3.14 30.10 3.18
3712 3931 2.177394 TGCTTAATTCAGGCGTGACA 57.823 45.000 8.96 0.00 30.10 3.58
3713 3932 3.764885 ATTGCTTAATTCAGGCGTGAC 57.235 42.857 8.96 0.00 30.10 3.67
3714 3933 5.888691 TTAATTGCTTAATTCAGGCGTGA 57.111 34.783 4.68 4.68 0.00 4.35
3715 3934 5.516339 CCTTTAATTGCTTAATTCAGGCGTG 59.484 40.000 0.00 0.00 0.00 5.34
3716 3935 5.417580 TCCTTTAATTGCTTAATTCAGGCGT 59.582 36.000 0.00 0.00 0.00 5.68
3717 3936 5.890334 TCCTTTAATTGCTTAATTCAGGCG 58.110 37.500 0.00 0.00 0.00 5.52
3718 3937 9.987272 AATATCCTTTAATTGCTTAATTCAGGC 57.013 29.630 0.00 0.00 0.00 4.85
3736 3955 9.156940 GGAGTAGTTCCTAACCTTAATATCCTT 57.843 37.037 0.00 0.00 43.16 3.36
3737 3956 7.450944 CGGAGTAGTTCCTAACCTTAATATCCT 59.549 40.741 0.00 0.00 44.41 3.24
3738 3957 7.309683 CCGGAGTAGTTCCTAACCTTAATATCC 60.310 44.444 0.00 0.00 44.41 2.59
3739 3958 7.600960 CCGGAGTAGTTCCTAACCTTAATATC 58.399 42.308 0.00 0.00 44.41 1.63
3740 3959 6.014755 GCCGGAGTAGTTCCTAACCTTAATAT 60.015 42.308 5.05 0.00 44.41 1.28
3741 3960 5.302823 GCCGGAGTAGTTCCTAACCTTAATA 59.697 44.000 5.05 0.00 44.41 0.98
3742 3961 4.100653 GCCGGAGTAGTTCCTAACCTTAAT 59.899 45.833 5.05 0.00 44.41 1.40
3743 3962 3.448660 GCCGGAGTAGTTCCTAACCTTAA 59.551 47.826 5.05 0.00 44.41 1.85
3744 3963 3.026694 GCCGGAGTAGTTCCTAACCTTA 58.973 50.000 5.05 0.00 44.41 2.69
3745 3964 1.829849 GCCGGAGTAGTTCCTAACCTT 59.170 52.381 5.05 0.00 44.41 3.50
3746 3965 1.272872 TGCCGGAGTAGTTCCTAACCT 60.273 52.381 5.05 0.00 44.41 3.50
3747 3966 1.188863 TGCCGGAGTAGTTCCTAACC 58.811 55.000 5.05 0.00 44.41 2.85
3748 3967 4.660789 TTATGCCGGAGTAGTTCCTAAC 57.339 45.455 5.05 0.00 44.41 2.34
3749 3968 5.881923 AATTATGCCGGAGTAGTTCCTAA 57.118 39.130 5.05 0.00 44.41 2.69
3750 3969 5.129815 ACAAATTATGCCGGAGTAGTTCCTA 59.870 40.000 5.05 0.00 44.41 2.94
3751 3970 4.080526 ACAAATTATGCCGGAGTAGTTCCT 60.081 41.667 5.05 0.00 44.41 3.36
3752 3971 4.196971 ACAAATTATGCCGGAGTAGTTCC 58.803 43.478 5.05 0.00 43.04 3.62
3753 3972 4.873827 TGACAAATTATGCCGGAGTAGTTC 59.126 41.667 5.05 0.00 0.00 3.01
3754 3973 4.839121 TGACAAATTATGCCGGAGTAGTT 58.161 39.130 5.05 0.00 0.00 2.24
3755 3974 4.481368 TGACAAATTATGCCGGAGTAGT 57.519 40.909 5.05 0.00 0.00 2.73
3756 3975 4.319766 GCATGACAAATTATGCCGGAGTAG 60.320 45.833 5.05 0.00 42.88 2.57
3757 3976 3.563808 GCATGACAAATTATGCCGGAGTA 59.436 43.478 5.05 0.00 42.88 2.59
3758 3977 2.358898 GCATGACAAATTATGCCGGAGT 59.641 45.455 5.05 0.00 42.88 3.85
3759 3978 3.004024 GCATGACAAATTATGCCGGAG 57.996 47.619 5.05 0.00 42.88 4.63
3799 4018 1.179814 ACTCAGACGTGGGTGTCTCC 61.180 60.000 0.00 0.00 45.97 3.71
3800 4019 0.674534 AACTCAGACGTGGGTGTCTC 59.325 55.000 0.00 0.00 45.97 3.36
3802 4021 1.949465 AAAACTCAGACGTGGGTGTC 58.051 50.000 0.00 0.00 35.79 3.67
3803 4022 2.413310 AAAAACTCAGACGTGGGTGT 57.587 45.000 0.00 0.00 35.79 4.16
3821 4040 6.783162 TCGTTCCTTTCGTGTTCAATAAAAA 58.217 32.000 0.00 0.00 0.00 1.94
3822 4041 6.360844 TCGTTCCTTTCGTGTTCAATAAAA 57.639 33.333 0.00 0.00 0.00 1.52
3823 4042 5.987777 TCGTTCCTTTCGTGTTCAATAAA 57.012 34.783 0.00 0.00 0.00 1.40
3824 4043 6.548441 AATCGTTCCTTTCGTGTTCAATAA 57.452 33.333 0.00 0.00 0.00 1.40
3825 4044 7.837202 ATAATCGTTCCTTTCGTGTTCAATA 57.163 32.000 0.00 0.00 0.00 1.90
3826 4045 6.737254 ATAATCGTTCCTTTCGTGTTCAAT 57.263 33.333 0.00 0.00 0.00 2.57
3827 4046 6.425721 AGAATAATCGTTCCTTTCGTGTTCAA 59.574 34.615 0.00 0.00 0.00 2.69
3828 4047 5.929992 AGAATAATCGTTCCTTTCGTGTTCA 59.070 36.000 0.00 0.00 0.00 3.18
3829 4048 6.404712 AGAATAATCGTTCCTTTCGTGTTC 57.595 37.500 0.00 0.00 0.00 3.18
3830 4049 6.425721 TCAAGAATAATCGTTCCTTTCGTGTT 59.574 34.615 0.00 0.00 30.94 3.32
3831 4050 5.929992 TCAAGAATAATCGTTCCTTTCGTGT 59.070 36.000 0.00 0.00 30.94 4.49
3832 4051 6.090898 ACTCAAGAATAATCGTTCCTTTCGTG 59.909 38.462 0.00 0.00 0.00 4.35
3833 4052 6.164176 ACTCAAGAATAATCGTTCCTTTCGT 58.836 36.000 0.00 0.00 0.00 3.85
3834 4053 6.648725 ACTCAAGAATAATCGTTCCTTTCG 57.351 37.500 0.00 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.