Multiple sequence alignment - TraesCS2D01G592800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G592800 chr2D 100.000 5927 0 0 1 5927 647807913 647801987 0.000000e+00 10946
1 TraesCS2D01G592800 chr2D 82.973 1204 174 15 2571 3757 636067298 636068487 0.000000e+00 1059
2 TraesCS2D01G592800 chr2D 81.237 938 129 20 914 1822 636065006 636065925 0.000000e+00 713
3 TraesCS2D01G592800 chr2D 79.944 708 115 14 3874 4572 636068532 636069221 4.130000e-136 496
4 TraesCS2D01G592800 chr2D 74.394 949 203 28 2835 3759 528323212 528324144 2.610000e-98 370
5 TraesCS2D01G592800 chr2D 70.787 623 152 20 3083 3690 23487585 23488192 1.350000e-21 115
6 TraesCS2D01G592800 chr2A 90.738 1749 105 29 1 1719 772736521 772738242 0.000000e+00 2279
7 TraesCS2D01G592800 chr2A 83.327 2537 351 40 2341 4841 772739644 772742144 0.000000e+00 2276
8 TraesCS2D01G592800 chr2A 84.148 1514 166 37 542 2027 772685165 772686632 0.000000e+00 1399
9 TraesCS2D01G592800 chr2A 85.488 758 81 14 4974 5723 772689561 772690297 0.000000e+00 763
10 TraesCS2D01G592800 chr2A 87.823 271 19 1 125 381 772684605 772684875 7.460000e-79 305
11 TraesCS2D01G592800 chr2A 75.000 496 99 15 1851 2332 772739187 772739671 7.790000e-49 206
12 TraesCS2D01G592800 chr2A 91.603 131 9 1 396 524 772684862 772684992 4.720000e-41 180
13 TraesCS2D01G592800 chr2A 70.494 688 171 22 3083 3754 25102242 25101571 3.750000e-22 117
14 TraesCS2D01G592800 chr2B 82.946 2539 358 37 2341 4840 788017924 788020426 0.000000e+00 2220
15 TraesCS2D01G592800 chr2B 88.671 1633 126 28 125 1719 788014902 788016513 0.000000e+00 1936
16 TraesCS2D01G592800 chr2B 83.110 1569 174 42 3931 5432 787860918 787859374 0.000000e+00 1345
17 TraesCS2D01G592800 chr2B 84.930 1221 163 13 2548 3756 788028632 788029843 0.000000e+00 1216
18 TraesCS2D01G592800 chr2B 84.682 1162 143 19 2612 3755 787869790 787868646 0.000000e+00 1127
19 TraesCS2D01G592800 chr2B 86.458 864 80 22 4862 5714 788030886 788031723 0.000000e+00 913
20 TraesCS2D01G592800 chr2B 85.230 738 77 15 4996 5717 788020666 788021387 0.000000e+00 730
21 TraesCS2D01G592800 chr2B 80.045 882 152 17 3900 4775 788029825 788030688 3.010000e-177 632
22 TraesCS2D01G592800 chr2B 80.206 874 114 26 795 1626 788026725 788027581 8.500000e-168 601
23 TraesCS2D01G592800 chr2B 82.317 656 85 19 938 1575 794101905 794102547 1.880000e-149 540
24 TraesCS2D01G592800 chr2B 82.317 656 85 19 938 1575 794110505 794111147 1.880000e-149 540
25 TraesCS2D01G592800 chr2B 75.100 502 97 16 1851 2332 788017458 788017951 6.020000e-50 209
26 TraesCS2D01G592800 chr3B 75.159 946 197 26 2835 3756 721046786 721047717 1.540000e-110 411
27 TraesCS2D01G592800 chr3B 74.816 953 195 30 2835 3759 721039641 721040576 7.200000e-104 388
28 TraesCS2D01G592800 chr3B 74.578 948 202 28 2835 3757 720990033 720990966 4.340000e-101 379
29 TraesCS2D01G592800 chr3B 91.000 200 17 1 5728 5927 113635081 113635279 9.790000e-68 268
30 TraesCS2D01G592800 chr3B 88.889 198 22 0 5730 5927 783050237 783050434 1.650000e-60 244
31 TraesCS2D01G592800 chr1D 96.535 202 5 2 5726 5925 435471450 435471249 3.420000e-87 333
32 TraesCS2D01G592800 chr3D 89.552 201 20 1 5728 5927 173697968 173698168 2.740000e-63 254
33 TraesCS2D01G592800 chr4A 76.712 438 86 14 971 1397 689100528 689100096 4.620000e-56 230
34 TraesCS2D01G592800 chr7D 76.212 433 89 12 977 1397 36750405 36749975 3.600000e-52 217
35 TraesCS2D01G592800 chr1A 73.176 466 113 9 4321 4783 551633215 551632759 2.210000e-34 158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G592800 chr2D 647801987 647807913 5926 True 10946.00 10946 100.000000 1 5927 1 chr2D.!!$R1 5926
1 TraesCS2D01G592800 chr2D 636065006 636069221 4215 False 756.00 1059 81.384667 914 4572 3 chr2D.!!$F3 3658
2 TraesCS2D01G592800 chr2D 528323212 528324144 932 False 370.00 370 74.394000 2835 3759 1 chr2D.!!$F2 924
3 TraesCS2D01G592800 chr2A 772736521 772742144 5623 False 1587.00 2279 83.021667 1 4841 3 chr2A.!!$F2 4840
4 TraesCS2D01G592800 chr2A 772684605 772690297 5692 False 661.75 1399 87.265500 125 5723 4 chr2A.!!$F1 5598
5 TraesCS2D01G592800 chr2B 787859374 787860918 1544 True 1345.00 1345 83.110000 3931 5432 1 chr2B.!!$R1 1501
6 TraesCS2D01G592800 chr2B 788014902 788021387 6485 False 1273.75 2220 82.986750 125 5717 4 chr2B.!!$F3 5592
7 TraesCS2D01G592800 chr2B 787868646 787869790 1144 True 1127.00 1127 84.682000 2612 3755 1 chr2B.!!$R2 1143
8 TraesCS2D01G592800 chr2B 788026725 788031723 4998 False 840.50 1216 82.909750 795 5714 4 chr2B.!!$F4 4919
9 TraesCS2D01G592800 chr2B 794101905 794102547 642 False 540.00 540 82.317000 938 1575 1 chr2B.!!$F1 637
10 TraesCS2D01G592800 chr2B 794110505 794111147 642 False 540.00 540 82.317000 938 1575 1 chr2B.!!$F2 637
11 TraesCS2D01G592800 chr3B 721046786 721047717 931 False 411.00 411 75.159000 2835 3756 1 chr3B.!!$F4 921
12 TraesCS2D01G592800 chr3B 721039641 721040576 935 False 388.00 388 74.816000 2835 3759 1 chr3B.!!$F3 924
13 TraesCS2D01G592800 chr3B 720990033 720990966 933 False 379.00 379 74.578000 2835 3757 1 chr3B.!!$F2 922

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
769 987 0.036010 AAGAAGCTGCCTACACGCAT 60.036 50.0 0.00 0.0 38.30 4.73 F
2169 3495 0.035056 AAGAATTGGGCCGACTCCTG 60.035 55.0 0.00 0.0 0.00 3.86 F
3342 4764 0.034616 AGGTCAAGAGCTGCACAGTC 59.965 55.0 1.02 0.0 37.82 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2453 3791 0.037326 ATCGTCGACCAATGTGCTGT 60.037 50.0 10.58 0.00 0.00 4.40 R
3862 5305 0.036388 ACATTGCACGGTACCTCCAG 60.036 55.0 10.90 0.00 35.57 3.86 R
5086 6700 0.548031 ACACATACCATGGCAGGAGG 59.452 55.0 13.04 0.67 33.60 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 42 2.095059 CGCTTGGAGGAAGAACCAAATG 60.095 50.000 0.00 0.00 44.03 2.32
66 68 1.235724 CCTTCCAAACGACCAAGGTC 58.764 55.000 9.22 9.22 41.40 3.85
70 72 3.116079 TCCAAACGACCAAGGTCTAAC 57.884 47.619 16.57 0.00 42.54 2.34
163 165 3.919216 AGACCAAAGATGACACGAGAAG 58.081 45.455 0.00 0.00 0.00 2.85
340 368 5.703592 TGCTTGGAGCTAATTTTCGAAGTAA 59.296 36.000 0.00 0.00 42.97 2.24
379 407 7.778382 TGCTTCTCTTCCCTAATAAAAATACCC 59.222 37.037 0.00 0.00 0.00 3.69
535 593 5.530171 GTCATCCCGTCTATTACACTACTCA 59.470 44.000 0.00 0.00 0.00 3.41
568 781 9.382275 TCAAAGATGAAATGAGAAATCGTGATA 57.618 29.630 0.00 0.00 30.99 2.15
578 791 6.878317 TGAGAAATCGTGATAAAGGATCTGT 58.122 36.000 0.00 0.00 35.37 3.41
656 874 1.742268 GTTGATGCTCTTCCTGGAAGC 59.258 52.381 27.88 20.21 39.29 3.86
657 875 0.254178 TGATGCTCTTCCTGGAAGCC 59.746 55.000 27.88 21.05 39.29 4.35
699 917 2.177016 GGTCCCCTGCCCTTATACATTT 59.823 50.000 0.00 0.00 0.00 2.32
762 980 4.373156 AAGGAAAAGAAGAAGCTGCCTA 57.627 40.909 0.00 0.00 0.00 3.93
763 981 3.680490 AGGAAAAGAAGAAGCTGCCTAC 58.320 45.455 0.00 0.00 0.00 3.18
765 983 3.189495 GGAAAAGAAGAAGCTGCCTACAC 59.811 47.826 0.00 0.00 0.00 2.90
766 984 2.086054 AAGAAGAAGCTGCCTACACG 57.914 50.000 0.00 0.00 0.00 4.49
767 985 0.390472 AGAAGAAGCTGCCTACACGC 60.390 55.000 0.00 0.00 0.00 5.34
768 986 0.670546 GAAGAAGCTGCCTACACGCA 60.671 55.000 0.00 0.00 37.19 5.24
769 987 0.036010 AAGAAGCTGCCTACACGCAT 60.036 50.000 0.00 0.00 38.30 4.73
770 988 0.742281 AGAAGCTGCCTACACGCATG 60.742 55.000 0.00 0.00 38.30 4.06
771 989 2.315038 GAAGCTGCCTACACGCATGC 62.315 60.000 7.91 7.91 38.30 4.06
772 990 3.880846 GCTGCCTACACGCATGCC 61.881 66.667 13.15 0.00 38.30 4.40
773 991 2.124983 CTGCCTACACGCATGCCT 60.125 61.111 13.15 0.00 38.30 4.75
774 992 1.746615 CTGCCTACACGCATGCCTT 60.747 57.895 13.15 0.00 38.30 4.35
775 993 1.985447 CTGCCTACACGCATGCCTTG 61.985 60.000 13.15 12.21 38.30 3.61
823 1044 4.766404 AGAACAAATCCTTTTGGTAGCG 57.234 40.909 3.76 0.00 42.80 4.26
1131 1388 1.823041 GAGCATGGGCAGCTTCCTC 60.823 63.158 1.39 0.00 43.58 3.71
1200 1457 0.546598 GGATGAACCAGGTCCGGATT 59.453 55.000 7.81 0.00 38.79 3.01
1431 1694 2.663602 CGAGGTCAAAACAGAGTCATCG 59.336 50.000 0.00 0.00 0.00 3.84
1440 1703 1.095600 CAGAGTCATCGTCTTCCGGA 58.904 55.000 0.00 0.00 37.11 5.14
1449 1718 2.607750 TCTTCCGGAGCTGGGCTT 60.608 61.111 3.34 0.00 39.88 4.35
1456 1728 2.359967 GGAGCTGGGCTTACGGAGT 61.360 63.158 0.00 0.00 42.35 3.85
1461 1733 1.138266 GCTGGGCTTACGGAGTCATTA 59.862 52.381 0.00 0.00 43.93 1.90
1470 1742 3.610040 ACGGAGTCATTATTGCTGTCA 57.390 42.857 0.00 0.00 29.74 3.58
1504 1779 5.233988 ACCATGAAGAAGAAGAAGAAGACG 58.766 41.667 0.00 0.00 0.00 4.18
1505 1780 5.011125 ACCATGAAGAAGAAGAAGAAGACGA 59.989 40.000 0.00 0.00 0.00 4.20
1506 1781 6.105333 CCATGAAGAAGAAGAAGAAGACGAT 58.895 40.000 0.00 0.00 0.00 3.73
1533 1808 2.686405 CCAACATGGTGATGATCCACTG 59.314 50.000 13.74 0.00 37.81 3.66
1561 1836 3.134804 GGCCTTGTCCATGACTACTATGT 59.865 47.826 0.00 0.00 33.15 2.29
1608 1889 3.238597 GAGGAGGCTAGATGACTGGATT 58.761 50.000 0.00 0.00 31.30 3.01
1655 1936 2.103042 CGGAGGCAGCGAAGAAAGG 61.103 63.158 0.00 0.00 0.00 3.11
1676 1957 3.372060 GCATAAAGTTAAATGCGGAGGC 58.628 45.455 7.21 0.00 39.15 4.70
1719 2012 2.769663 ACTACCATCCATCGCCTTTGTA 59.230 45.455 0.00 0.00 0.00 2.41
1721 2014 0.947244 CCATCCATCGCCTTTGTAGC 59.053 55.000 0.00 0.00 0.00 3.58
1731 2024 1.390463 GCCTTTGTAGCGAAGAACGAG 59.610 52.381 0.00 0.00 45.77 4.18
1732 2025 2.673833 CCTTTGTAGCGAAGAACGAGT 58.326 47.619 0.00 0.00 45.77 4.18
1742 2050 1.518056 AAGAACGAGTACGCCGACCA 61.518 55.000 15.64 0.00 43.96 4.02
1747 2055 0.591741 CGAGTACGCCGACCATCTTC 60.592 60.000 5.00 0.00 0.00 2.87
1759 2067 3.367087 CGACCATCTTCGGTGTAAAGTCT 60.367 47.826 0.00 0.00 40.22 3.24
1764 2072 4.675976 TCTTCGGTGTAAAGTCTTGGAA 57.324 40.909 0.00 0.00 0.00 3.53
1773 2081 2.262423 AAGTCTTGGAAGTGGCAGAC 57.738 50.000 0.00 0.00 36.66 3.51
1775 2083 0.951040 GTCTTGGAAGTGGCAGACGG 60.951 60.000 0.00 0.00 0.00 4.79
1796 2104 1.098050 CATTTCAAGAGGGCGAAGGG 58.902 55.000 0.00 0.00 0.00 3.95
1818 2126 2.027561 CGTCCAAGATAAGGTTGTCCCA 60.028 50.000 0.00 0.00 34.66 4.37
1822 2130 1.946984 AGATAAGGTTGTCCCACCGA 58.053 50.000 0.00 0.00 42.33 4.69
1848 3159 1.933021 AGGACGCCGGGAATATCATA 58.067 50.000 2.18 0.00 0.00 2.15
1865 3176 2.287103 TCATAGTCTTCGTCGACATCCG 59.713 50.000 17.16 0.96 36.38 4.18
1954 3271 2.337532 CGCAGCAAGGCAAAGCTT 59.662 55.556 0.00 0.00 39.50 3.74
1960 3277 2.555757 CAGCAAGGCAAAGCTTCTACTT 59.444 45.455 0.00 1.34 39.50 2.24
1967 3284 5.621193 AGGCAAAGCTTCTACTTACAGAAA 58.379 37.500 0.00 0.00 34.22 2.52
1990 3307 7.619964 AAAAGATGGGGTACTTACAAATACG 57.380 36.000 0.00 0.00 0.00 3.06
2006 3323 3.520290 ATACGCAAGGAAGACGATTCA 57.480 42.857 0.00 0.00 46.39 2.57
2018 3335 5.355350 GGAAGACGATTCATGAAATCAAGGT 59.645 40.000 13.09 4.38 43.44 3.50
2044 3361 8.592155 TCAAGATAAATAAAGTGAATGTCGACG 58.408 33.333 11.62 0.00 0.00 5.12
2046 3363 4.939509 AAATAAAGTGAATGTCGACGGG 57.060 40.909 11.62 0.00 0.00 5.28
2052 3369 2.159226 AGTGAATGTCGACGGGAAGATC 60.159 50.000 11.62 2.04 0.00 2.75
2063 3380 2.168521 ACGGGAAGATCAATGACATCGT 59.831 45.455 0.00 0.00 0.00 3.73
2065 3382 3.983988 CGGGAAGATCAATGACATCGTAG 59.016 47.826 0.00 0.00 0.00 3.51
2069 3386 6.809196 GGGAAGATCAATGACATCGTAGTATC 59.191 42.308 0.00 0.00 0.00 2.24
2096 3413 5.918608 TCTTGGTGATAGTAAAGATCAGCC 58.081 41.667 11.16 5.30 46.51 4.85
2098 3415 3.704566 TGGTGATAGTAAAGATCAGCCGT 59.295 43.478 11.16 0.00 46.51 5.68
2099 3416 4.051922 GGTGATAGTAAAGATCAGCCGTG 58.948 47.826 0.00 0.00 43.08 4.94
2111 3428 2.676471 GCCGTGGGACCTGCAAAT 60.676 61.111 0.00 0.00 0.00 2.32
2112 3429 2.275380 GCCGTGGGACCTGCAAATT 61.275 57.895 0.00 0.00 0.00 1.82
2116 3433 1.605202 CGTGGGACCTGCAAATTTTGG 60.605 52.381 10.96 0.00 0.00 3.28
2121 3438 3.244526 GGGACCTGCAAATTTTGGACAAT 60.245 43.478 10.96 0.00 0.00 2.71
2122 3439 3.996363 GGACCTGCAAATTTTGGACAATC 59.004 43.478 10.96 4.01 0.00 2.67
2123 3440 4.262592 GGACCTGCAAATTTTGGACAATCT 60.263 41.667 10.96 0.00 0.00 2.40
2125 3442 5.783111 ACCTGCAAATTTTGGACAATCTAC 58.217 37.500 10.96 0.00 0.00 2.59
2126 3443 5.304101 ACCTGCAAATTTTGGACAATCTACA 59.696 36.000 10.96 0.00 0.00 2.74
2127 3444 5.865552 CCTGCAAATTTTGGACAATCTACAG 59.134 40.000 10.96 6.09 0.00 2.74
2131 3448 6.071952 GCAAATTTTGGACAATCTACAGGAGA 60.072 38.462 10.96 0.00 39.01 3.71
2133 3450 7.693969 AATTTTGGACAATCTACAGGAGAAG 57.306 36.000 0.00 0.00 37.85 2.85
2142 3465 6.944862 ACAATCTACAGGAGAAGCAAGAAATT 59.055 34.615 0.00 0.00 37.85 1.82
2144 3467 5.248640 TCTACAGGAGAAGCAAGAAATTGG 58.751 41.667 0.00 0.00 0.00 3.16
2149 3472 1.270550 AGAAGCAAGAAATTGGCGGTG 59.729 47.619 0.00 0.00 0.00 4.94
2169 3495 0.035056 AAGAATTGGGCCGACTCCTG 60.035 55.000 0.00 0.00 0.00 3.86
2178 3504 4.749310 CGACTCCTGCGGCTGCTT 62.749 66.667 20.27 0.00 43.34 3.91
2195 3521 5.285651 GCTGCTTATCTACCACTCAACTAG 58.714 45.833 0.00 0.00 0.00 2.57
2196 3522 5.163499 GCTGCTTATCTACCACTCAACTAGT 60.163 44.000 0.00 0.00 39.81 2.57
2197 3523 6.039493 GCTGCTTATCTACCACTCAACTAGTA 59.961 42.308 0.00 0.00 35.76 1.82
2209 3544 6.305157 ACTCAACTAGTACTGCTGCTGCAA 62.305 45.833 19.37 2.60 42.36 4.08
2242 3577 9.981460 AGGACAAAAAGATTAAATCTGGAGTAT 57.019 29.630 0.00 0.00 40.13 2.12
2258 3593 5.190677 TGGAGTATCAGAGTTGTACGATGA 58.809 41.667 0.00 0.00 36.25 2.92
2291 3626 4.503123 GCAAACAGCCAGGAACCTTAAATT 60.503 41.667 0.00 0.00 37.23 1.82
2339 3677 3.204418 GCTGCAGGAGCCCAAATC 58.796 61.111 17.12 0.00 42.54 2.17
2340 3678 1.679977 GCTGCAGGAGCCCAAATCA 60.680 57.895 17.12 0.00 42.54 2.57
2341 3679 1.664321 GCTGCAGGAGCCCAAATCAG 61.664 60.000 17.12 0.00 42.54 2.90
2342 3680 1.000521 TGCAGGAGCCCAAATCAGG 60.001 57.895 0.00 0.00 41.13 3.86
2348 3686 3.521796 GCCCAAATCAGGCGGCTC 61.522 66.667 9.32 0.00 41.41 4.70
2349 3687 2.045045 CCCAAATCAGGCGGCTCA 60.045 61.111 9.32 0.00 0.00 4.26
2350 3688 1.678635 CCCAAATCAGGCGGCTCAA 60.679 57.895 9.32 0.00 0.00 3.02
2351 3689 1.660560 CCCAAATCAGGCGGCTCAAG 61.661 60.000 9.32 0.00 0.00 3.02
2352 3690 1.138247 CAAATCAGGCGGCTCAAGC 59.862 57.895 9.32 0.00 41.14 4.01
2404 3742 1.070134 TCTTGAAGACGGTGTTCCCAG 59.930 52.381 14.55 10.69 0.00 4.45
2406 3744 1.124780 TGAAGACGGTGTTCCCAGAA 58.875 50.000 14.55 0.00 0.00 3.02
2407 3745 1.487142 TGAAGACGGTGTTCCCAGAAA 59.513 47.619 14.55 0.00 0.00 2.52
2411 3749 0.178533 ACGGTGTTCCCAGAAACGAA 59.821 50.000 0.00 0.00 31.58 3.85
2413 3751 0.584876 GGTGTTCCCAGAAACGAACG 59.415 55.000 0.00 0.00 41.04 3.95
2414 3752 0.041576 GTGTTCCCAGAAACGAACGC 60.042 55.000 0.00 0.00 41.04 4.84
2415 3753 1.161563 TGTTCCCAGAAACGAACGCC 61.162 55.000 0.00 0.00 41.04 5.68
2416 3754 1.146485 TTCCCAGAAACGAACGCCA 59.854 52.632 0.00 0.00 0.00 5.69
2417 3755 0.882927 TTCCCAGAAACGAACGCCAG 60.883 55.000 0.00 0.00 0.00 4.85
2453 3791 1.065926 CACTGCTGCCAATAGTCCTCA 60.066 52.381 0.00 0.00 0.00 3.86
2454 3792 1.065854 ACTGCTGCCAATAGTCCTCAC 60.066 52.381 0.00 0.00 0.00 3.51
2455 3793 0.983467 TGCTGCCAATAGTCCTCACA 59.017 50.000 0.00 0.00 0.00 3.58
2473 3814 0.647410 CAGCACATTGGTCGACGATC 59.353 55.000 9.92 0.00 0.00 3.69
2501 3842 4.459337 CCAAGAAATGGTCAGAAGGGTTAC 59.541 45.833 0.00 0.00 44.85 2.50
2517 3858 5.452255 AGGGTTACAGAAATGATGCATGAT 58.548 37.500 2.46 0.00 0.00 2.45
2521 3862 6.261603 GGTTACAGAAATGATGCATGATCTCA 59.738 38.462 2.46 0.00 31.55 3.27
2546 3887 8.239998 CAGGGAATTAGAAAAATCTGACAAGAC 58.760 37.037 0.00 0.00 34.48 3.01
2573 3944 3.482786 CGGAAGCTGATTTTCACGAAAG 58.517 45.455 0.00 0.00 0.00 2.62
2579 3953 4.697352 AGCTGATTTTCACGAAAGCATAGT 59.303 37.500 0.00 0.00 42.23 2.12
2589 3963 5.635280 TCACGAAAGCATAGTGAAGAAGAAG 59.365 40.000 3.58 0.00 41.30 2.85
2590 3964 4.932200 ACGAAAGCATAGTGAAGAAGAAGG 59.068 41.667 0.00 0.00 0.00 3.46
2591 3965 4.201763 CGAAAGCATAGTGAAGAAGAAGGC 60.202 45.833 0.00 0.00 0.00 4.35
2595 3969 3.870419 GCATAGTGAAGAAGAAGGCAGAG 59.130 47.826 0.00 0.00 0.00 3.35
2638 4015 5.012239 AGCAGCTCAAGGTTAAAATGATGA 58.988 37.500 0.00 0.00 0.00 2.92
2691 4074 4.760530 TCAAAGGATCCTGGTCATACTG 57.239 45.455 17.02 3.35 0.00 2.74
2692 4075 3.455910 TCAAAGGATCCTGGTCATACTGG 59.544 47.826 17.02 0.00 0.00 4.00
2712 4098 5.375417 TGGAAGTTTATGACAAGCATGTG 57.625 39.130 0.00 0.00 40.74 3.21
2715 4101 3.424703 AGTTTATGACAAGCATGTGCCT 58.575 40.909 0.00 0.00 40.74 4.75
2716 4102 3.192001 AGTTTATGACAAGCATGTGCCTG 59.808 43.478 0.00 1.46 40.74 4.85
2744 4130 4.276926 GCAAGAGACCAGAAACAGTTTGAT 59.723 41.667 2.34 0.00 0.00 2.57
2746 4132 5.559148 AGAGACCAGAAACAGTTTGATCT 57.441 39.130 2.34 0.78 0.00 2.75
2759 4148 4.455533 CAGTTTGATCTCGTTGGAATTGGA 59.544 41.667 0.00 0.00 0.00 3.53
2772 4167 2.497792 AATTGGAGTGCCCCATCGCA 62.498 55.000 0.00 0.00 35.87 5.10
2782 4177 2.359107 CCATCGCAGGTGCTGTGT 60.359 61.111 0.00 0.00 41.99 3.72
2789 4184 1.523711 CAGGTGCTGTGTTCGTGGT 60.524 57.895 0.00 0.00 0.00 4.16
2815 4225 5.422012 ACAAAGACCACTCAACAGGATTTTT 59.578 36.000 0.00 0.00 0.00 1.94
2816 4226 5.774498 AAGACCACTCAACAGGATTTTTC 57.226 39.130 0.00 0.00 0.00 2.29
2828 4238 2.989571 AGGATTTTTCCTGTCCAGACCT 59.010 45.455 0.00 0.00 38.98 3.85
2829 4239 3.084786 GGATTTTTCCTGTCCAGACCTG 58.915 50.000 0.00 0.00 32.23 4.00
2830 4240 3.244911 GGATTTTTCCTGTCCAGACCTGA 60.245 47.826 0.00 0.00 32.23 3.86
2921 4334 0.039618 AATGATCCACAAACCCGCCT 59.960 50.000 0.00 0.00 0.00 5.52
2985 4398 4.329392 TCTGCATGAAGATCTTTGCTCAA 58.671 39.130 25.15 12.74 0.00 3.02
3015 4428 0.401738 CCAAACCCAAGAGGAGCAGA 59.598 55.000 0.00 0.00 39.89 4.26
3051 4464 4.146058 CACAGCTCCTTGTGTGCA 57.854 55.556 0.00 0.00 42.68 4.57
3056 4469 1.887242 GCTCCTTGTGTGCACGTGA 60.887 57.895 22.23 1.04 33.65 4.35
3064 4477 1.813337 TGTGCACGTGACACACCAG 60.813 57.895 29.35 1.12 42.88 4.00
3085 4507 3.825014 AGAATCATTGCCCAGTATGATGC 59.175 43.478 0.00 0.00 39.83 3.91
3117 4539 3.637694 CCTACAGGGAGCTACCTAAAGAC 59.362 52.174 20.00 0.00 39.34 3.01
3188 4610 1.207089 CAGGCGGTCAACCTTGATAGA 59.793 52.381 0.00 0.00 39.73 1.98
3248 4670 0.472734 AGCTGGTCCTCTTCAGTGGT 60.473 55.000 0.00 0.00 33.81 4.16
3301 4723 1.106944 CCGGTGCCTTGTTTGTCCTT 61.107 55.000 0.00 0.00 0.00 3.36
3342 4764 0.034616 AGGTCAAGAGCTGCACAGTC 59.965 55.000 1.02 0.00 37.82 3.51
3380 4802 3.882888 GGATTCATTACCAAGATCGCCAA 59.117 43.478 0.00 0.00 0.00 4.52
3483 4916 6.423001 GCAGCTCTGAAACAATTGAAGATTTT 59.577 34.615 13.59 1.23 0.00 1.82
3513 4955 3.582208 AGTCATCTCAGTTCTCCAAGCTT 59.418 43.478 0.00 0.00 0.00 3.74
3519 4961 5.084519 TCTCAGTTCTCCAAGCTTAAGGTA 58.915 41.667 7.76 0.00 0.00 3.08
3539 4981 4.453136 GGTACTAGATCTAGAAGGCTGTCG 59.547 50.000 31.91 6.74 36.97 4.35
3548 4990 0.884704 GAAGGCTGTCGTTGCTTCCA 60.885 55.000 0.00 0.00 0.00 3.53
3549 4991 0.465460 AAGGCTGTCGTTGCTTCCAA 60.465 50.000 0.00 0.00 0.00 3.53
3550 4992 1.166531 AGGCTGTCGTTGCTTCCAAC 61.167 55.000 0.00 0.00 46.15 3.77
3594 5036 4.285517 AGGGACATATGCAGGAAGATACTG 59.714 45.833 1.58 0.00 38.95 2.74
3613 5055 3.705579 ACTGATGCTCAAGTATCTCAGCT 59.294 43.478 9.12 0.00 37.90 4.24
3636 5079 2.496470 GAGGAGAACGGATGTTACCAGT 59.504 50.000 0.00 0.00 38.78 4.00
3642 5085 0.806102 CGGATGTTACCAGTCTGCCG 60.806 60.000 0.00 0.00 0.00 5.69
3710 5153 3.947196 GACACCAACATTCCTGCATATGA 59.053 43.478 6.97 0.00 0.00 2.15
3719 5162 6.624423 ACATTCCTGCATATGAAACAAGAAC 58.376 36.000 6.97 0.00 0.00 3.01
3784 5227 2.392613 GAAGCGTGTGTTGGCTGGTG 62.393 60.000 0.00 0.00 39.93 4.17
3786 5229 2.477176 GCGTGTGTTGGCTGGTGAA 61.477 57.895 0.00 0.00 0.00 3.18
3793 5236 2.030805 GTGTTGGCTGGTGAAGTTGATC 60.031 50.000 0.00 0.00 0.00 2.92
3812 5255 1.623811 TCCAAGTCCAAGCAGTCCTAC 59.376 52.381 0.00 0.00 0.00 3.18
3846 5289 2.842496 TGTCCAGATGCCTGAGAAGATT 59.158 45.455 0.00 0.00 43.02 2.40
3913 5356 1.909376 TCGTCTGAAGCGTCTATTGC 58.091 50.000 0.31 0.00 0.00 3.56
3970 5422 0.907486 TGTGCAGATCCCTGAGAAGG 59.093 55.000 0.00 0.00 43.02 3.46
4019 5471 1.815003 GTCCAATGTCAAGCCCAAGAG 59.185 52.381 0.00 0.00 0.00 2.85
4098 5550 5.187186 GGTTATCAACAAGGAGAGTGACCTA 59.813 44.000 0.00 0.00 36.67 3.08
4103 5555 1.135257 CAAGGAGAGTGACCTACAGCG 60.135 57.143 0.00 0.00 36.67 5.18
4125 5577 7.633361 GCGATTGCTTAAATCAATCAATGAT 57.367 32.000 20.76 0.00 46.10 2.45
4189 5641 6.183361 TGACATAAGCATATACAAGGGCTCTT 60.183 38.462 0.00 0.00 35.11 2.85
4222 5677 3.745723 CTGGTAAACAGCCCCAAGT 57.254 52.632 0.00 0.00 40.97 3.16
4227 5682 3.054655 TGGTAAACAGCCCCAAGTATCTC 60.055 47.826 0.00 0.00 0.00 2.75
4294 5773 3.134623 CACTAGCACACATATGGGGAAGA 59.865 47.826 10.35 0.00 0.00 2.87
4314 5793 8.699130 GGGAAGATTCTTGAATTATTGACCAAT 58.301 33.333 3.03 0.64 34.93 3.16
4371 5859 2.291741 CACTTTTCTGAGCCAGGAACAC 59.708 50.000 0.00 0.00 27.39 3.32
4435 5923 2.993449 TCGACACAATGCGTACACTA 57.007 45.000 0.00 0.00 0.00 2.74
4443 5931 4.093408 CACAATGCGTACACTAAGAGCAAT 59.907 41.667 0.00 0.00 41.37 3.56
4456 5944 7.333921 ACACTAAGAGCAATCTCATCTTCAAAG 59.666 37.037 0.00 0.00 41.81 2.77
4470 5958 6.432162 TCATCTTCAAAGAGGGTGAATTCAAG 59.568 38.462 10.35 0.00 38.66 3.02
4538 6026 7.912056 TCATATTTGATAATGGAGCTGCTAC 57.088 36.000 4.51 4.51 0.00 3.58
4540 6028 7.821359 TCATATTTGATAATGGAGCTGCTACTC 59.179 37.037 13.97 2.58 35.86 2.59
4579 6067 1.906574 TGTCCTCCACCAACATAGTCC 59.093 52.381 0.00 0.00 0.00 3.85
4593 6081 4.884961 ACATAGTCCCTATCAGTGGAGTT 58.115 43.478 0.00 0.00 35.85 3.01
4596 6084 7.076446 ACATAGTCCCTATCAGTGGAGTTAAT 58.924 38.462 0.00 0.00 35.85 1.40
4608 6096 8.934023 TCAGTGGAGTTAATTACCTTCAAAAT 57.066 30.769 0.00 0.00 0.00 1.82
4649 6137 1.542915 CCACATCAAGAACAAGGGCAG 59.457 52.381 0.00 0.00 0.00 4.85
4677 6165 5.734220 GCATTCATTACTTCACAATGCCGAT 60.734 40.000 3.98 0.00 42.27 4.18
4695 6183 2.936498 CGATCACATAACCAAGGTGACC 59.064 50.000 0.00 0.00 43.58 4.02
4737 6225 4.015084 AGCAAAGTGATCTGGAAATCCTG 58.985 43.478 0.44 0.31 36.82 3.86
4743 6231 0.554792 ATCTGGAAATCCTGGCCCAG 59.445 55.000 2.91 2.91 45.63 4.45
4752 6240 0.486879 TCCTGGCCCAGAAACCAAAT 59.513 50.000 13.74 0.00 34.96 2.32
4780 6268 2.302733 TGCATAGTGCTCTTGGACAAGA 59.697 45.455 13.56 13.56 45.31 3.02
4821 6315 8.647143 TCTTGAACAAAGATGAATTCCAAAAC 57.353 30.769 2.27 0.00 40.09 2.43
4822 6316 7.434897 TCTTGAACAAAGATGAATTCCAAAACG 59.565 33.333 2.27 0.00 40.09 3.60
4832 6326 4.202070 TGAATTCCAAAACGTCAACCTTCC 60.202 41.667 2.27 0.00 0.00 3.46
4860 6459 4.333372 GTCGACAAACTTCCTACACCAAAA 59.667 41.667 11.55 0.00 0.00 2.44
4866 6465 5.562298 AACTTCCTACACCAAAAGAGCTA 57.438 39.130 0.00 0.00 0.00 3.32
4905 6513 4.874966 CCTGATGAGGTGAAAGAAGACATC 59.125 45.833 0.00 0.00 34.16 3.06
4912 6520 6.136541 AGGTGAAAGAAGACATCAAAACAC 57.863 37.500 0.00 0.00 0.00 3.32
4913 6521 5.067805 AGGTGAAAGAAGACATCAAAACACC 59.932 40.000 0.00 0.00 38.86 4.16
4914 6522 5.163561 GGTGAAAGAAGACATCAAAACACCA 60.164 40.000 0.00 0.00 38.66 4.17
4915 6523 5.973565 GTGAAAGAAGACATCAAAACACCAG 59.026 40.000 0.00 0.00 0.00 4.00
4916 6524 5.885352 TGAAAGAAGACATCAAAACACCAGA 59.115 36.000 0.00 0.00 0.00 3.86
4918 6526 6.382869 AAGAAGACATCAAAACACCAGAAG 57.617 37.500 0.00 0.00 0.00 2.85
4923 6531 4.074970 ACATCAAAACACCAGAAGCTAGG 58.925 43.478 0.00 0.00 0.00 3.02
4924 6532 3.857157 TCAAAACACCAGAAGCTAGGT 57.143 42.857 0.00 0.00 39.10 3.08
4927 6535 4.591498 TCAAAACACCAGAAGCTAGGTAGA 59.409 41.667 5.23 0.00 36.07 2.59
4930 6538 2.498078 ACACCAGAAGCTAGGTAGAAGC 59.502 50.000 5.23 0.00 40.40 3.86
4938 6546 3.028130 AGCTAGGTAGAAGCCTTGACTC 58.972 50.000 0.00 0.00 41.02 3.36
4939 6547 2.223618 GCTAGGTAGAAGCCTTGACTCG 60.224 54.545 0.00 0.00 39.94 4.18
4942 6550 2.231721 AGGTAGAAGCCTTGACTCGAAC 59.768 50.000 0.00 0.00 34.71 3.95
4943 6551 2.029290 GGTAGAAGCCTTGACTCGAACA 60.029 50.000 0.00 0.00 0.00 3.18
4944 6552 2.447244 AGAAGCCTTGACTCGAACAG 57.553 50.000 0.00 0.00 0.00 3.16
4971 6585 2.669391 GCCAGAAAATCAAGACCAAGCG 60.669 50.000 0.00 0.00 0.00 4.68
5040 6654 1.228154 GAAGGCGAAGGGTTGGTGT 60.228 57.895 0.00 0.00 0.00 4.16
5049 6663 0.178843 AGGGTTGGTGTGGGAGGTAT 60.179 55.000 0.00 0.00 0.00 2.73
5062 6676 3.500646 GGGAGGTATTGAAGGCCTTCCT 61.501 54.545 36.75 28.42 43.31 3.36
5075 6689 2.347731 GCCTTCCTGTTACTTCTTCCG 58.652 52.381 0.00 0.00 0.00 4.30
5086 6700 5.637810 TGTTACTTCTTCCGTTCATCATCAC 59.362 40.000 0.00 0.00 0.00 3.06
5087 6701 3.600388 ACTTCTTCCGTTCATCATCACC 58.400 45.455 0.00 0.00 0.00 4.02
5130 6744 3.276091 TGCTCGTGTGGTTTGCCG 61.276 61.111 0.00 0.00 37.67 5.69
5171 6786 1.067516 AGTGTGCATTTGTGTTCTGCC 59.932 47.619 0.00 0.00 35.02 4.85
5177 6792 0.311790 ATTTGTGTTCTGCCTGTGCG 59.688 50.000 0.00 0.00 41.78 5.34
5198 6845 3.157087 GGATTGATTTGAGTGGTGTGGT 58.843 45.455 0.00 0.00 0.00 4.16
5199 6846 3.573967 GGATTGATTTGAGTGGTGTGGTT 59.426 43.478 0.00 0.00 0.00 3.67
5200 6847 4.549458 GATTGATTTGAGTGGTGTGGTTG 58.451 43.478 0.00 0.00 0.00 3.77
5201 6848 3.011566 TGATTTGAGTGGTGTGGTTGT 57.988 42.857 0.00 0.00 0.00 3.32
5202 6849 2.687425 TGATTTGAGTGGTGTGGTTGTG 59.313 45.455 0.00 0.00 0.00 3.33
5203 6850 1.468985 TTTGAGTGGTGTGGTTGTGG 58.531 50.000 0.00 0.00 0.00 4.17
5204 6851 1.034838 TTGAGTGGTGTGGTTGTGGC 61.035 55.000 0.00 0.00 0.00 5.01
5240 6894 0.395586 TTCTGCCTGTGTGCCTTGTT 60.396 50.000 0.00 0.00 0.00 2.83
5248 6902 1.339610 TGTGTGCCTTGTTATTGTGGC 59.660 47.619 0.00 0.00 45.10 5.01
5277 6931 6.017192 GCATAATGGTTGTGTGTATGCTCATA 60.017 38.462 6.69 0.00 42.34 2.15
5281 6935 4.468153 TGGTTGTGTGTATGCTCATAGGTA 59.532 41.667 0.00 0.00 0.00 3.08
5357 7014 2.679355 TGTACGCACATTTGACTTGC 57.321 45.000 0.00 0.00 0.00 4.01
5426 7086 5.089970 TCTCCAATGATGAACTGGTGTAG 57.910 43.478 0.00 0.00 0.00 2.74
5499 7171 6.500684 TTATAGCCTTTGAAGCAGAGTTTG 57.499 37.500 0.00 0.00 0.00 2.93
5500 7172 2.659428 AGCCTTTGAAGCAGAGTTTGT 58.341 42.857 0.00 0.00 0.00 2.83
5501 7173 3.026694 AGCCTTTGAAGCAGAGTTTGTT 58.973 40.909 0.00 0.00 0.00 2.83
5502 7174 3.448660 AGCCTTTGAAGCAGAGTTTGTTT 59.551 39.130 0.00 0.00 32.41 2.83
5533 7205 8.147058 GCAGATCAGAGGTTTCTCAGATATTTA 58.853 37.037 0.00 0.00 43.41 1.40
5543 7215 9.784531 GGTTTCTCAGATATTTATCCATCTTCA 57.215 33.333 0.00 0.00 33.17 3.02
5546 7218 8.496534 TCTCAGATATTTATCCATCTTCACCA 57.503 34.615 0.00 0.00 33.17 4.17
5561 7233 1.679680 TCACCATAGCTAGTGCGGTAC 59.320 52.381 7.99 0.00 45.42 3.34
5563 7235 1.681793 ACCATAGCTAGTGCGGTACTG 59.318 52.381 9.11 0.00 45.42 2.74
5629 7306 1.471684 ACAGCTAGGTCGGTAAAGTCG 59.528 52.381 0.00 0.00 0.00 4.18
5632 7309 2.560105 AGCTAGGTCGGTAAAGTCGTTT 59.440 45.455 0.00 0.00 0.00 3.60
5696 7373 6.959671 GTCCTCTTGACAGAATTCAGTAAG 57.040 41.667 8.44 10.06 43.85 2.34
5723 7400 3.195610 TCACACATGACCAGACACCTATC 59.804 47.826 0.00 0.00 0.00 2.08
5724 7401 3.196469 CACACATGACCAGACACCTATCT 59.804 47.826 0.00 0.00 0.00 1.98
5725 7402 3.840666 ACACATGACCAGACACCTATCTT 59.159 43.478 0.00 0.00 0.00 2.40
5726 7403 4.287067 ACACATGACCAGACACCTATCTTT 59.713 41.667 0.00 0.00 0.00 2.52
5727 7404 5.483937 ACACATGACCAGACACCTATCTTTA 59.516 40.000 0.00 0.00 0.00 1.85
5728 7405 6.045318 CACATGACCAGACACCTATCTTTAG 58.955 44.000 0.00 0.00 0.00 1.85
5729 7406 5.958380 ACATGACCAGACACCTATCTTTAGA 59.042 40.000 0.00 0.00 0.00 2.10
5730 7407 6.097554 ACATGACCAGACACCTATCTTTAGAG 59.902 42.308 0.00 0.00 0.00 2.43
5731 7408 4.402793 TGACCAGACACCTATCTTTAGAGC 59.597 45.833 0.00 0.00 0.00 4.09
5732 7409 3.707102 ACCAGACACCTATCTTTAGAGCC 59.293 47.826 0.00 0.00 0.00 4.70
5733 7410 3.964031 CCAGACACCTATCTTTAGAGCCT 59.036 47.826 0.00 0.00 0.00 4.58
5734 7411 4.202202 CCAGACACCTATCTTTAGAGCCTG 60.202 50.000 0.00 0.00 0.00 4.85
5735 7412 4.404073 CAGACACCTATCTTTAGAGCCTGT 59.596 45.833 0.00 0.00 0.00 4.00
5736 7413 5.026790 AGACACCTATCTTTAGAGCCTGTT 58.973 41.667 0.00 0.00 0.00 3.16
5737 7414 5.128008 AGACACCTATCTTTAGAGCCTGTTC 59.872 44.000 0.00 0.00 0.00 3.18
5738 7415 4.142138 ACACCTATCTTTAGAGCCTGTTCG 60.142 45.833 0.00 0.00 0.00 3.95
5739 7416 3.385111 ACCTATCTTTAGAGCCTGTTCGG 59.615 47.826 0.00 0.00 0.00 4.30
5740 7417 3.637229 CCTATCTTTAGAGCCTGTTCGGA 59.363 47.826 0.00 0.00 33.16 4.55
5741 7418 4.099573 CCTATCTTTAGAGCCTGTTCGGAA 59.900 45.833 0.00 0.00 33.16 4.30
5742 7419 4.553330 ATCTTTAGAGCCTGTTCGGAAA 57.447 40.909 0.00 0.00 33.16 3.13
5743 7420 4.553330 TCTTTAGAGCCTGTTCGGAAAT 57.447 40.909 0.00 0.00 33.16 2.17
5744 7421 4.253685 TCTTTAGAGCCTGTTCGGAAATG 58.746 43.478 0.00 0.00 33.16 2.32
5745 7422 2.691409 TAGAGCCTGTTCGGAAATGG 57.309 50.000 0.00 0.00 33.16 3.16
5746 7423 0.693049 AGAGCCTGTTCGGAAATGGT 59.307 50.000 10.60 0.87 33.16 3.55
5747 7424 1.087501 GAGCCTGTTCGGAAATGGTC 58.912 55.000 10.60 5.79 33.16 4.02
5748 7425 0.322546 AGCCTGTTCGGAAATGGTCC 60.323 55.000 10.60 0.00 43.90 4.46
5756 7433 3.485764 GGAAATGGTCCAGCTCCTC 57.514 57.895 12.86 0.00 46.97 3.71
5757 7434 0.915364 GGAAATGGTCCAGCTCCTCT 59.085 55.000 12.86 0.00 46.97 3.69
5758 7435 1.407989 GGAAATGGTCCAGCTCCTCTG 60.408 57.143 12.86 0.00 46.97 3.35
5759 7436 1.556911 GAAATGGTCCAGCTCCTCTGA 59.443 52.381 0.00 0.00 45.72 3.27
5760 7437 1.661463 AATGGTCCAGCTCCTCTGAA 58.339 50.000 0.00 0.00 45.72 3.02
5761 7438 1.890552 ATGGTCCAGCTCCTCTGAAT 58.109 50.000 0.00 0.00 45.72 2.57
5762 7439 1.661463 TGGTCCAGCTCCTCTGAATT 58.339 50.000 0.00 0.00 45.72 2.17
5763 7440 1.556911 TGGTCCAGCTCCTCTGAATTC 59.443 52.381 0.00 0.00 45.72 2.17
5764 7441 1.836802 GGTCCAGCTCCTCTGAATTCT 59.163 52.381 7.05 0.00 45.72 2.40
5765 7442 2.158971 GGTCCAGCTCCTCTGAATTCTC 60.159 54.545 7.05 0.00 45.72 2.87
5766 7443 2.499289 GTCCAGCTCCTCTGAATTCTCA 59.501 50.000 7.05 0.00 45.72 3.27
5767 7444 3.055530 GTCCAGCTCCTCTGAATTCTCAA 60.056 47.826 7.05 0.00 45.72 3.02
5768 7445 3.055530 TCCAGCTCCTCTGAATTCTCAAC 60.056 47.826 7.05 0.00 45.72 3.18
5769 7446 3.055240 CCAGCTCCTCTGAATTCTCAACT 60.055 47.826 7.05 0.00 45.72 3.16
5770 7447 4.183101 CAGCTCCTCTGAATTCTCAACTC 58.817 47.826 7.05 0.00 45.72 3.01
5771 7448 3.197549 AGCTCCTCTGAATTCTCAACTCC 59.802 47.826 7.05 0.00 0.00 3.85
5772 7449 3.681313 GCTCCTCTGAATTCTCAACTCCC 60.681 52.174 7.05 0.00 0.00 4.30
5773 7450 3.517100 CTCCTCTGAATTCTCAACTCCCA 59.483 47.826 7.05 0.00 0.00 4.37
5774 7451 3.261897 TCCTCTGAATTCTCAACTCCCAC 59.738 47.826 7.05 0.00 0.00 4.61
5775 7452 3.262915 CCTCTGAATTCTCAACTCCCACT 59.737 47.826 7.05 0.00 0.00 4.00
5776 7453 4.502962 CTCTGAATTCTCAACTCCCACTC 58.497 47.826 7.05 0.00 0.00 3.51
5777 7454 3.261897 TCTGAATTCTCAACTCCCACTCC 59.738 47.826 7.05 0.00 0.00 3.85
5778 7455 3.251484 TGAATTCTCAACTCCCACTCCT 58.749 45.455 7.05 0.00 0.00 3.69
5779 7456 3.261897 TGAATTCTCAACTCCCACTCCTC 59.738 47.826 7.05 0.00 0.00 3.71
5780 7457 1.645710 TTCTCAACTCCCACTCCTCC 58.354 55.000 0.00 0.00 0.00 4.30
5781 7458 0.487325 TCTCAACTCCCACTCCTCCA 59.513 55.000 0.00 0.00 0.00 3.86
5782 7459 1.079490 TCTCAACTCCCACTCCTCCAT 59.921 52.381 0.00 0.00 0.00 3.41
5783 7460 1.484240 CTCAACTCCCACTCCTCCATC 59.516 57.143 0.00 0.00 0.00 3.51
5784 7461 0.543749 CAACTCCCACTCCTCCATCC 59.456 60.000 0.00 0.00 0.00 3.51
5785 7462 0.119155 AACTCCCACTCCTCCATCCA 59.881 55.000 0.00 0.00 0.00 3.41
5786 7463 0.119155 ACTCCCACTCCTCCATCCAA 59.881 55.000 0.00 0.00 0.00 3.53
5787 7464 0.835941 CTCCCACTCCTCCATCCAAG 59.164 60.000 0.00 0.00 0.00 3.61
5788 7465 0.417437 TCCCACTCCTCCATCCAAGA 59.583 55.000 0.00 0.00 0.00 3.02
5789 7466 1.010046 TCCCACTCCTCCATCCAAGAT 59.990 52.381 0.00 0.00 0.00 2.40
5790 7467 1.142465 CCCACTCCTCCATCCAAGATG 59.858 57.143 0.00 0.00 0.00 2.90
5791 7468 1.476471 CCACTCCTCCATCCAAGATGC 60.476 57.143 0.00 0.00 0.00 3.91
5792 7469 1.489649 CACTCCTCCATCCAAGATGCT 59.510 52.381 0.00 0.00 0.00 3.79
5793 7470 1.489649 ACTCCTCCATCCAAGATGCTG 59.510 52.381 0.00 0.00 0.00 4.41
5794 7471 0.182061 TCCTCCATCCAAGATGCTGC 59.818 55.000 0.00 0.00 0.00 5.25
5795 7472 0.183014 CCTCCATCCAAGATGCTGCT 59.817 55.000 0.00 0.00 0.00 4.24
5796 7473 1.595466 CTCCATCCAAGATGCTGCTC 58.405 55.000 0.00 0.00 0.00 4.26
5797 7474 0.182061 TCCATCCAAGATGCTGCTCC 59.818 55.000 0.00 0.00 0.00 4.70
5798 7475 0.183014 CCATCCAAGATGCTGCTCCT 59.817 55.000 0.00 0.00 0.00 3.69
5799 7476 1.409802 CCATCCAAGATGCTGCTCCTT 60.410 52.381 0.00 1.18 0.00 3.36
5800 7477 1.676529 CATCCAAGATGCTGCTCCTTG 59.323 52.381 19.97 19.97 37.58 3.61
5801 7478 0.694771 TCCAAGATGCTGCTCCTTGT 59.305 50.000 22.79 0.00 36.47 3.16
5802 7479 1.908619 TCCAAGATGCTGCTCCTTGTA 59.091 47.619 22.79 12.12 36.47 2.41
5803 7480 2.305635 TCCAAGATGCTGCTCCTTGTAA 59.694 45.455 22.79 13.68 36.47 2.41
5804 7481 3.084039 CCAAGATGCTGCTCCTTGTAAA 58.916 45.455 22.79 0.00 36.47 2.01
5805 7482 3.507233 CCAAGATGCTGCTCCTTGTAAAA 59.493 43.478 22.79 0.00 36.47 1.52
5806 7483 4.022068 CCAAGATGCTGCTCCTTGTAAAAA 60.022 41.667 22.79 0.00 36.47 1.94
5807 7484 5.159209 CAAGATGCTGCTCCTTGTAAAAAG 58.841 41.667 19.18 0.00 34.27 2.27
5808 7485 4.401925 AGATGCTGCTCCTTGTAAAAAGT 58.598 39.130 0.00 0.00 0.00 2.66
5809 7486 5.560724 AGATGCTGCTCCTTGTAAAAAGTA 58.439 37.500 0.00 0.00 0.00 2.24
5810 7487 5.645497 AGATGCTGCTCCTTGTAAAAAGTAG 59.355 40.000 0.00 0.00 0.00 2.57
5811 7488 3.502211 TGCTGCTCCTTGTAAAAAGTAGC 59.498 43.478 0.00 4.63 43.14 3.58
5812 7489 3.424962 GCTGCTCCTTGTAAAAAGTAGCG 60.425 47.826 0.00 0.00 37.54 4.26
5813 7490 2.482721 TGCTCCTTGTAAAAAGTAGCGC 59.517 45.455 0.00 0.00 0.00 5.92
5814 7491 2.742589 GCTCCTTGTAAAAAGTAGCGCT 59.257 45.455 17.26 17.26 0.00 5.92
5815 7492 3.424962 GCTCCTTGTAAAAAGTAGCGCTG 60.425 47.826 22.90 0.00 0.00 5.18
5816 7493 3.994392 CTCCTTGTAAAAAGTAGCGCTGA 59.006 43.478 22.90 2.27 0.00 4.26
5817 7494 4.382291 TCCTTGTAAAAAGTAGCGCTGAA 58.618 39.130 22.90 0.00 0.00 3.02
5818 7495 4.817464 TCCTTGTAAAAAGTAGCGCTGAAA 59.183 37.500 22.90 0.00 0.00 2.69
5819 7496 5.297278 TCCTTGTAAAAAGTAGCGCTGAAAA 59.703 36.000 22.90 0.00 0.00 2.29
5820 7497 5.974751 CCTTGTAAAAAGTAGCGCTGAAAAA 59.025 36.000 22.90 0.00 0.00 1.94
5837 7514 2.208326 AAAAACTGTTCGGCAAGCAG 57.792 45.000 0.00 1.44 36.41 4.24
5838 7515 0.249031 AAAACTGTTCGGCAAGCAGC 60.249 50.000 0.00 0.00 44.65 5.25
5839 7516 1.103398 AAACTGTTCGGCAAGCAGCT 61.103 50.000 0.00 0.00 44.79 4.24
5840 7517 1.103398 AACTGTTCGGCAAGCAGCTT 61.103 50.000 0.21 0.21 44.79 3.74
5841 7518 1.208614 CTGTTCGGCAAGCAGCTTC 59.791 57.895 4.07 0.23 44.79 3.86
5842 7519 2.174349 GTTCGGCAAGCAGCTTCG 59.826 61.111 4.07 7.32 44.79 3.79
5843 7520 3.726517 TTCGGCAAGCAGCTTCGC 61.727 61.111 4.07 12.35 44.79 4.70
5844 7521 4.687215 TCGGCAAGCAGCTTCGCT 62.687 61.111 21.45 0.00 46.67 4.93
5845 7522 4.157958 CGGCAAGCAGCTTCGCTC 62.158 66.667 21.45 14.07 42.89 5.03
5846 7523 3.808656 GGCAAGCAGCTTCGCTCC 61.809 66.667 21.45 11.20 42.89 4.70
5847 7524 2.745492 GCAAGCAGCTTCGCTCCT 60.745 61.111 17.43 0.00 42.89 3.69
5848 7525 3.036783 GCAAGCAGCTTCGCTCCTG 62.037 63.158 17.43 3.55 42.89 3.86
5849 7526 1.375140 CAAGCAGCTTCGCTCCTGA 60.375 57.895 4.07 0.00 42.89 3.86
5850 7527 0.743701 CAAGCAGCTTCGCTCCTGAT 60.744 55.000 4.07 0.00 42.89 2.90
5851 7528 0.035630 AAGCAGCTTCGCTCCTGATT 60.036 50.000 0.21 0.00 42.89 2.57
5852 7529 0.461693 AGCAGCTTCGCTCCTGATTC 60.462 55.000 0.00 0.00 37.91 2.52
5853 7530 0.742281 GCAGCTTCGCTCCTGATTCA 60.742 55.000 0.00 0.00 36.40 2.57
5854 7531 1.005340 CAGCTTCGCTCCTGATTCAC 58.995 55.000 0.00 0.00 36.40 3.18
5855 7532 0.459237 AGCTTCGCTCCTGATTCACG 60.459 55.000 0.00 0.00 30.62 4.35
5856 7533 0.458543 GCTTCGCTCCTGATTCACGA 60.459 55.000 0.00 0.00 0.00 4.35
5857 7534 1.554392 CTTCGCTCCTGATTCACGAG 58.446 55.000 7.95 7.95 33.84 4.18
5858 7535 0.173481 TTCGCTCCTGATTCACGAGG 59.827 55.000 12.64 0.44 33.84 4.63
5859 7536 0.679960 TCGCTCCTGATTCACGAGGA 60.680 55.000 12.64 4.40 36.87 3.71
5863 7540 1.769026 TCCTGATTCACGAGGAGAGG 58.231 55.000 0.00 0.00 33.18 3.69
5864 7541 0.103937 CCTGATTCACGAGGAGAGGC 59.896 60.000 0.00 0.00 0.00 4.70
5865 7542 0.820226 CTGATTCACGAGGAGAGGCA 59.180 55.000 0.00 0.00 0.00 4.75
5866 7543 0.820226 TGATTCACGAGGAGAGGCAG 59.180 55.000 0.00 0.00 0.00 4.85
5867 7544 1.107114 GATTCACGAGGAGAGGCAGA 58.893 55.000 0.00 0.00 0.00 4.26
5868 7545 1.478510 GATTCACGAGGAGAGGCAGAA 59.521 52.381 0.00 0.00 0.00 3.02
5869 7546 0.603569 TTCACGAGGAGAGGCAGAAC 59.396 55.000 0.00 0.00 0.00 3.01
5870 7547 1.216710 CACGAGGAGAGGCAGAACC 59.783 63.158 0.00 0.00 39.61 3.62
5871 7548 2.344203 ACGAGGAGAGGCAGAACCG 61.344 63.158 0.00 0.00 46.52 4.44
5872 7549 2.344203 CGAGGAGAGGCAGAACCGT 61.344 63.158 0.00 0.00 46.52 4.83
5873 7550 1.030488 CGAGGAGAGGCAGAACCGTA 61.030 60.000 0.00 0.00 46.52 4.02
5874 7551 1.404843 GAGGAGAGGCAGAACCGTAT 58.595 55.000 0.00 0.00 46.52 3.06
5875 7552 2.584236 GAGGAGAGGCAGAACCGTATA 58.416 52.381 0.00 0.00 46.52 1.47
5876 7553 2.554893 GAGGAGAGGCAGAACCGTATAG 59.445 54.545 0.00 0.00 46.52 1.31
5877 7554 1.614413 GGAGAGGCAGAACCGTATAGG 59.386 57.143 0.00 0.00 46.52 2.57
5878 7555 1.000052 GAGAGGCAGAACCGTATAGGC 60.000 57.143 0.00 0.00 46.52 3.93
5879 7556 0.318784 GAGGCAGAACCGTATAGGCG 60.319 60.000 0.00 0.00 46.52 5.52
5880 7557 0.754217 AGGCAGAACCGTATAGGCGA 60.754 55.000 0.00 0.00 46.52 5.54
5881 7558 0.318784 GGCAGAACCGTATAGGCGAG 60.319 60.000 0.00 0.00 46.52 5.03
5882 7559 0.940047 GCAGAACCGTATAGGCGAGC 60.940 60.000 0.00 0.00 46.52 5.03
5883 7560 0.660595 CAGAACCGTATAGGCGAGCG 60.661 60.000 0.00 0.00 46.52 5.03
5884 7561 0.816825 AGAACCGTATAGGCGAGCGA 60.817 55.000 0.00 0.00 46.52 4.93
5885 7562 0.385723 GAACCGTATAGGCGAGCGAG 60.386 60.000 0.00 0.00 46.52 5.03
5886 7563 1.099879 AACCGTATAGGCGAGCGAGT 61.100 55.000 0.00 0.00 46.52 4.18
5887 7564 1.207085 CCGTATAGGCGAGCGAGTC 59.793 63.158 0.00 0.00 0.00 3.36
5911 7588 3.292159 GGCCGCTCAACCCGTTTT 61.292 61.111 0.00 0.00 0.00 2.43
5912 7589 2.254350 GCCGCTCAACCCGTTTTC 59.746 61.111 0.00 0.00 0.00 2.29
5913 7590 2.951458 CCGCTCAACCCGTTTTCC 59.049 61.111 0.00 0.00 0.00 3.13
5914 7591 1.894756 CCGCTCAACCCGTTTTCCA 60.895 57.895 0.00 0.00 0.00 3.53
5915 7592 1.281656 CGCTCAACCCGTTTTCCAC 59.718 57.895 0.00 0.00 0.00 4.02
5916 7593 1.164041 CGCTCAACCCGTTTTCCACT 61.164 55.000 0.00 0.00 0.00 4.00
5917 7594 1.029681 GCTCAACCCGTTTTCCACTT 58.970 50.000 0.00 0.00 0.00 3.16
5918 7595 1.269051 GCTCAACCCGTTTTCCACTTG 60.269 52.381 0.00 0.00 0.00 3.16
5919 7596 1.336755 CTCAACCCGTTTTCCACTTGG 59.663 52.381 0.00 0.00 0.00 3.61
5920 7597 0.249280 CAACCCGTTTTCCACTTGGC 60.249 55.000 0.00 0.00 34.44 4.52
5921 7598 1.730451 AACCCGTTTTCCACTTGGCG 61.730 55.000 0.00 0.00 34.44 5.69
5922 7599 2.642700 CCGTTTTCCACTTGGCGG 59.357 61.111 0.00 0.00 32.42 6.13
5923 7600 2.190841 CCGTTTTCCACTTGGCGGT 61.191 57.895 4.39 0.00 34.02 5.68
5924 7601 1.008995 CGTTTTCCACTTGGCGGTG 60.009 57.895 3.85 3.85 37.00 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 42 1.664873 GTCGTTTGGAAGGGGATAGC 58.335 55.000 0.00 0.00 0.00 2.97
66 68 4.184629 CTCCAGACCTTGATTTCGGTTAG 58.815 47.826 0.00 0.00 32.62 2.34
70 72 2.744202 CAACTCCAGACCTTGATTTCGG 59.256 50.000 0.00 0.00 0.00 4.30
340 368 2.039084 AGAGAAGCAAACGGGTGAGATT 59.961 45.455 0.00 0.00 0.00 2.40
388 416 5.047590 GGCAAGGGTATTTTTATTATCCCGG 60.048 44.000 0.00 0.00 39.78 5.73
389 417 5.773176 AGGCAAGGGTATTTTTATTATCCCG 59.227 40.000 0.00 0.00 39.78 5.14
656 874 0.532196 GGGACCGCGATTTTCCTAGG 60.532 60.000 8.23 0.82 0.00 3.02
657 875 0.532196 GGGGACCGCGATTTTCCTAG 60.532 60.000 8.23 0.00 40.86 3.02
762 980 2.985282 CCACCAAGGCATGCGTGT 60.985 61.111 14.59 5.57 31.89 4.49
771 989 2.983592 GAACCCACGCCACCAAGG 60.984 66.667 0.00 0.00 41.84 3.61
772 990 2.983592 GGAACCCACGCCACCAAG 60.984 66.667 0.00 0.00 0.00 3.61
773 991 3.783362 CTGGAACCCACGCCACCAA 62.783 63.158 0.00 0.00 0.00 3.67
774 992 4.263572 CTGGAACCCACGCCACCA 62.264 66.667 0.00 0.00 0.00 4.17
787 1005 7.403231 AGGATTTGTTCTTCTATTCTACCTGGA 59.597 37.037 0.00 0.00 0.00 3.86
833 1054 1.001974 GTCTATCTGTGTGTGTGCCCA 59.998 52.381 0.00 0.00 0.00 5.36
834 1055 1.726853 GTCTATCTGTGTGTGTGCCC 58.273 55.000 0.00 0.00 0.00 5.36
835 1056 1.336887 ACGTCTATCTGTGTGTGTGCC 60.337 52.381 0.00 0.00 0.00 5.01
836 1057 1.721389 CACGTCTATCTGTGTGTGTGC 59.279 52.381 0.00 0.00 0.00 4.57
837 1058 3.013276 ACACGTCTATCTGTGTGTGTG 57.987 47.619 0.00 0.00 46.87 3.82
879 1104 0.880278 ATGCGTCTGTGTGGTGTGTC 60.880 55.000 0.00 0.00 0.00 3.67
1083 1340 0.320683 CCTGGATGAACTGCACGTCA 60.321 55.000 0.00 0.00 0.00 4.35
1131 1388 3.755628 TTCCCGGAGAGGTTCGCG 61.756 66.667 0.73 0.00 38.74 5.87
1233 1490 0.105811 GGTCCCCACGGTAGAGGTAT 60.106 60.000 0.00 0.00 0.00 2.73
1257 1514 0.401738 CTTCCTTGGGCAAGTGGAGA 59.598 55.000 0.00 0.00 36.72 3.71
1431 1694 1.614241 TAAGCCCAGCTCCGGAAGAC 61.614 60.000 5.23 0.00 38.25 3.01
1440 1703 0.978146 ATGACTCCGTAAGCCCAGCT 60.978 55.000 0.00 0.00 42.56 4.24
1449 1718 4.682787 CTGACAGCAATAATGACTCCGTA 58.317 43.478 0.00 0.00 0.00 4.02
1456 1728 2.749076 GTGTGGCTGACAGCAATAATGA 59.251 45.455 27.87 2.45 44.75 2.57
1461 1733 0.956633 CTTGTGTGGCTGACAGCAAT 59.043 50.000 27.87 0.00 44.75 3.56
1470 1742 1.421268 TCTTCATGGTCTTGTGTGGCT 59.579 47.619 0.00 0.00 0.00 4.75
1533 1808 0.038166 TCATGGACAAGGCCACCTTC 59.962 55.000 5.01 0.00 42.67 3.46
1561 1836 3.791320 AGTAGTCTTCCTTGTCCATCCA 58.209 45.455 0.00 0.00 0.00 3.41
1608 1889 4.408821 GCCTGCACCACCGATCCA 62.409 66.667 0.00 0.00 0.00 3.41
1644 1925 6.569179 TTTAACTTTATGCCTTTCTTCGCT 57.431 33.333 0.00 0.00 0.00 4.93
1655 1936 3.372060 GCCTCCGCATTTAACTTTATGC 58.628 45.455 0.00 0.00 42.82 3.14
1719 2012 1.154073 GGCGTACTCGTTCTTCGCT 60.154 57.895 7.69 0.00 45.01 4.93
1721 2014 1.124702 GTCGGCGTACTCGTTCTTCG 61.125 60.000 6.85 0.00 39.49 3.79
1722 2015 0.796113 GGTCGGCGTACTCGTTCTTC 60.796 60.000 6.85 0.00 39.49 2.87
1724 2017 1.310933 ATGGTCGGCGTACTCGTTCT 61.311 55.000 6.85 0.00 39.49 3.01
1728 2021 0.591741 GAAGATGGTCGGCGTACTCG 60.592 60.000 6.85 0.00 40.37 4.18
1731 2024 3.993103 CGAAGATGGTCGGCGTAC 58.007 61.111 6.85 3.71 37.37 3.67
1742 2050 4.884668 TCCAAGACTTTACACCGAAGAT 57.115 40.909 0.00 0.00 0.00 2.40
1747 2055 2.806244 CCACTTCCAAGACTTTACACCG 59.194 50.000 0.00 0.00 0.00 4.94
1750 2058 3.135712 TCTGCCACTTCCAAGACTTTACA 59.864 43.478 0.00 0.00 0.00 2.41
1759 2067 2.281484 GCCGTCTGCCACTTCCAA 60.281 61.111 0.00 0.00 0.00 3.53
1773 2081 2.764314 CGCCCTCTTGAAATGGCCG 61.764 63.158 0.00 0.00 40.87 6.13
1775 2083 0.453390 CTTCGCCCTCTTGAAATGGC 59.547 55.000 0.00 0.00 40.54 4.40
1791 2099 1.209747 ACCTTATCTTGGACGCCCTTC 59.790 52.381 0.00 0.00 0.00 3.46
1796 2104 2.007608 GGACAACCTTATCTTGGACGC 58.992 52.381 0.00 0.00 0.00 5.19
1818 2126 4.353437 GCGTCCTTGGTCGTCGGT 62.353 66.667 7.95 0.00 0.00 4.69
1848 3159 1.136984 GCGGATGTCGACGAAGACT 59.863 57.895 11.62 0.00 41.47 3.24
1879 3190 2.608752 GGGGTCGTAGCGGTACATTATG 60.609 54.545 23.29 7.80 0.00 1.90
1883 3194 1.380246 TGGGGTCGTAGCGGTACAT 60.380 57.895 23.29 0.00 0.00 2.29
1937 3248 1.731969 GAAGCTTTGCCTTGCTGCG 60.732 57.895 0.00 0.00 39.71 5.18
1949 3260 7.391833 CCCATCTTTTTCTGTAAGTAGAAGCTT 59.608 37.037 0.00 0.00 37.91 3.74
1954 3271 6.697641 ACCCCATCTTTTTCTGTAAGTAGA 57.302 37.500 0.00 0.00 33.76 2.59
1960 3277 7.319052 TGTAAGTACCCCATCTTTTTCTGTA 57.681 36.000 0.00 0.00 0.00 2.74
1967 3284 5.587443 GCGTATTTGTAAGTACCCCATCTTT 59.413 40.000 0.00 0.00 0.00 2.52
1990 3307 4.685169 TTTCATGAATCGTCTTCCTTGC 57.315 40.909 9.40 0.00 0.00 4.01
2018 3335 8.592155 CGTCGACATTCACTTTATTTATCTTGA 58.408 33.333 17.16 0.00 0.00 3.02
2044 3361 4.950050 ACTACGATGTCATTGATCTTCCC 58.050 43.478 7.09 0.00 0.00 3.97
2046 3363 7.371159 TGGATACTACGATGTCATTGATCTTC 58.629 38.462 7.09 0.00 37.61 2.87
2052 3369 7.790974 CAAGATTGGATACTACGATGTCATTG 58.209 38.462 0.00 0.00 37.61 2.82
2079 3396 3.069586 CCCACGGCTGATCTTTACTATCA 59.930 47.826 0.00 0.00 32.56 2.15
2083 3400 1.207329 GTCCCACGGCTGATCTTTACT 59.793 52.381 0.00 0.00 0.00 2.24
2096 3413 1.605202 CCAAAATTTGCAGGTCCCACG 60.605 52.381 0.00 0.00 0.00 4.94
2098 3415 1.691434 GTCCAAAATTTGCAGGTCCCA 59.309 47.619 0.00 0.00 0.00 4.37
2099 3416 1.691434 TGTCCAAAATTTGCAGGTCCC 59.309 47.619 0.00 0.00 0.00 4.46
2111 3428 5.003804 GCTTCTCCTGTAGATTGTCCAAAA 58.996 41.667 0.00 0.00 33.05 2.44
2112 3429 4.041567 TGCTTCTCCTGTAGATTGTCCAAA 59.958 41.667 0.00 0.00 33.05 3.28
2116 3433 5.078411 TCTTGCTTCTCCTGTAGATTGTC 57.922 43.478 0.00 0.00 33.05 3.18
2121 3438 5.248640 CCAATTTCTTGCTTCTCCTGTAGA 58.751 41.667 0.00 0.00 0.00 2.59
2122 3439 4.142513 GCCAATTTCTTGCTTCTCCTGTAG 60.143 45.833 0.00 0.00 0.00 2.74
2123 3440 3.758554 GCCAATTTCTTGCTTCTCCTGTA 59.241 43.478 0.00 0.00 0.00 2.74
2125 3442 2.415090 CGCCAATTTCTTGCTTCTCCTG 60.415 50.000 0.00 0.00 0.00 3.86
2126 3443 1.815003 CGCCAATTTCTTGCTTCTCCT 59.185 47.619 0.00 0.00 0.00 3.69
2127 3444 1.135286 CCGCCAATTTCTTGCTTCTCC 60.135 52.381 0.00 0.00 0.00 3.71
2131 3448 1.327303 TCACCGCCAATTTCTTGCTT 58.673 45.000 0.00 0.00 0.00 3.91
2133 3450 1.269448 TCTTCACCGCCAATTTCTTGC 59.731 47.619 0.00 0.00 0.00 4.01
2142 3465 1.976474 GCCCAATTCTTCACCGCCA 60.976 57.895 0.00 0.00 0.00 5.69
2144 3467 2.885113 GGCCCAATTCTTCACCGC 59.115 61.111 0.00 0.00 0.00 5.68
2149 3472 0.253327 AGGAGTCGGCCCAATTCTTC 59.747 55.000 0.00 0.00 0.00 2.87
2169 3495 0.105039 AGTGGTAGATAAGCAGCCGC 59.895 55.000 0.00 0.00 35.94 6.53
2178 3504 6.542735 CAGCAGTACTAGTTGAGTGGTAGATA 59.457 42.308 0.00 0.00 39.39 1.98
2235 3570 5.066117 GTCATCGTACAACTCTGATACTCCA 59.934 44.000 0.00 0.00 0.00 3.86
2242 3577 5.582550 GATGATGTCATCGTACAACTCTGA 58.417 41.667 7.55 0.00 42.66 3.27
2258 3593 2.230508 CTGGCTGTTTGCTTGATGATGT 59.769 45.455 0.00 0.00 42.39 3.06
2291 3626 6.094603 GCTTGAGCATCCTTCTTCTATTTTCA 59.905 38.462 0.00 0.00 41.59 2.69
2327 3665 2.273449 CGCCTGATTTGGGCTCCT 59.727 61.111 3.25 0.00 46.73 3.69
2331 3669 3.521796 GAGCCGCCTGATTTGGGC 61.522 66.667 0.00 0.00 45.91 5.36
2332 3670 1.660560 CTTGAGCCGCCTGATTTGGG 61.661 60.000 0.00 0.00 0.00 4.12
2333 3671 1.805254 CTTGAGCCGCCTGATTTGG 59.195 57.895 0.00 0.00 0.00 3.28
2334 3672 1.138247 GCTTGAGCCGCCTGATTTG 59.862 57.895 0.00 0.00 34.31 2.32
2335 3673 3.595819 GCTTGAGCCGCCTGATTT 58.404 55.556 0.00 0.00 34.31 2.17
2359 3697 2.808523 TCATATTCGAGCTCCTGCAG 57.191 50.000 6.78 6.78 42.74 4.41
2360 3698 2.695147 TCTTCATATTCGAGCTCCTGCA 59.305 45.455 8.47 0.00 42.74 4.41
2361 3699 3.056304 GTCTTCATATTCGAGCTCCTGC 58.944 50.000 8.47 0.00 40.05 4.85
2362 3700 4.313277 TGTCTTCATATTCGAGCTCCTG 57.687 45.455 8.47 0.00 0.00 3.86
2369 3707 6.693113 CGTCTTCAAGATGTCTTCATATTCGA 59.307 38.462 0.00 0.00 33.90 3.71
2404 3742 2.127232 GCTGCTGGCGTTCGTTTC 60.127 61.111 0.00 0.00 0.00 2.78
2406 3744 0.953471 TAATGCTGCTGGCGTTCGTT 60.953 50.000 11.69 0.00 46.01 3.85
2407 3745 1.375396 TAATGCTGCTGGCGTTCGT 60.375 52.632 11.69 0.00 46.01 3.85
2411 3749 2.040544 GTGGTAATGCTGCTGGCGT 61.041 57.895 0.00 0.00 45.43 5.68
2413 3751 1.678635 TGGTGGTAATGCTGCTGGC 60.679 57.895 0.00 0.00 42.22 4.85
2414 3752 1.315257 GGTGGTGGTAATGCTGCTGG 61.315 60.000 0.00 0.00 0.00 4.85
2415 3753 0.608856 TGGTGGTGGTAATGCTGCTG 60.609 55.000 0.00 0.00 0.00 4.41
2416 3754 0.609131 GTGGTGGTGGTAATGCTGCT 60.609 55.000 0.00 0.00 0.00 4.24
2417 3755 0.609131 AGTGGTGGTGGTAATGCTGC 60.609 55.000 0.00 0.00 0.00 5.25
2453 3791 0.037326 ATCGTCGACCAATGTGCTGT 60.037 50.000 10.58 0.00 0.00 4.40
2454 3792 0.647410 GATCGTCGACCAATGTGCTG 59.353 55.000 10.58 0.00 0.00 4.41
2455 3793 0.246360 TGATCGTCGACCAATGTGCT 59.754 50.000 10.58 0.00 0.00 4.40
2494 3835 4.858850 TCATGCATCATTTCTGTAACCCT 58.141 39.130 0.00 0.00 0.00 4.34
2501 3842 4.216472 CCCTGAGATCATGCATCATTTCTG 59.784 45.833 2.83 2.33 33.29 3.02
2517 3858 7.689299 TGTCAGATTTTTCTAATTCCCTGAGA 58.311 34.615 0.00 0.00 0.00 3.27
2521 3862 7.944554 TGTCTTGTCAGATTTTTCTAATTCCCT 59.055 33.333 0.00 0.00 0.00 4.20
2546 3887 1.202348 GAAAATCAGCTTCCGGGGTTG 59.798 52.381 0.00 3.60 0.00 3.77
2573 3944 3.866651 TCTGCCTTCTTCTTCACTATGC 58.133 45.455 0.00 0.00 0.00 3.14
2579 3953 6.550938 TTATGATCTCTGCCTTCTTCTTCA 57.449 37.500 0.00 0.00 0.00 3.02
2589 3963 7.675062 TCCTAATCTTCTTTATGATCTCTGCC 58.325 38.462 0.00 0.00 0.00 4.85
2590 3964 9.206870 CTTCCTAATCTTCTTTATGATCTCTGC 57.793 37.037 0.00 0.00 0.00 4.26
2591 3965 9.206870 GCTTCCTAATCTTCTTTATGATCTCTG 57.793 37.037 0.00 0.00 0.00 3.35
2595 3969 7.661027 AGCTGCTTCCTAATCTTCTTTATGATC 59.339 37.037 0.00 0.00 0.00 2.92
2653 4030 2.270352 TGATCACCTTCCAAGCGTTT 57.730 45.000 0.00 0.00 0.00 3.60
2656 4033 1.470098 CCTTTGATCACCTTCCAAGCG 59.530 52.381 0.00 0.00 0.00 4.68
2691 4074 4.168760 GCACATGCTTGTCATAAACTTCC 58.831 43.478 1.56 0.00 38.21 3.46
2692 4075 4.082571 AGGCACATGCTTGTCATAAACTTC 60.083 41.667 1.56 0.00 41.70 3.01
2715 4101 3.072330 TGTTTCTGGTCTCTTGCCATACA 59.928 43.478 0.00 0.00 35.19 2.29
2716 4102 3.674997 TGTTTCTGGTCTCTTGCCATAC 58.325 45.455 0.00 0.00 35.19 2.39
2717 4103 3.327757 ACTGTTTCTGGTCTCTTGCCATA 59.672 43.478 0.00 0.00 35.19 2.74
2722 4108 5.762218 AGATCAAACTGTTTCTGGTCTCTTG 59.238 40.000 2.13 0.00 0.00 3.02
2724 4110 5.546526 GAGATCAAACTGTTTCTGGTCTCT 58.453 41.667 20.52 10.09 41.92 3.10
2744 4130 1.610624 GGCACTCCAATTCCAACGAGA 60.611 52.381 0.00 0.00 0.00 4.04
2746 4132 0.608035 GGGCACTCCAATTCCAACGA 60.608 55.000 0.00 0.00 35.00 3.85
2759 4148 4.415150 CACCTGCGATGGGGCACT 62.415 66.667 0.00 0.00 38.17 4.40
2772 4167 1.227556 GACCACGAACACAGCACCT 60.228 57.895 0.00 0.00 0.00 4.00
2789 4184 2.503765 TCCTGTTGAGTGGTCTTTGTGA 59.496 45.455 0.00 0.00 0.00 3.58
2815 4225 0.413434 TCCATCAGGTCTGGACAGGA 59.587 55.000 3.10 0.34 37.87 3.86
2816 4226 2.996985 TCCATCAGGTCTGGACAGG 58.003 57.895 3.10 0.00 37.87 4.00
2826 4236 7.340743 AGAGAATATTCTATACGGTCCATCAGG 59.659 40.741 17.94 0.00 37.73 3.86
2828 4238 8.523658 CAAGAGAATATTCTATACGGTCCATCA 58.476 37.037 17.94 0.00 37.73 3.07
2829 4239 8.524487 ACAAGAGAATATTCTATACGGTCCATC 58.476 37.037 17.94 1.83 37.73 3.51
2830 4240 8.423906 ACAAGAGAATATTCTATACGGTCCAT 57.576 34.615 17.94 0.00 37.73 3.41
2985 4398 2.373335 TGGGTTTGGTGTACAATGCT 57.627 45.000 0.00 0.00 39.21 3.79
3015 4428 1.202734 TGCAGCTTGCTCAACTCTTCT 60.203 47.619 9.12 0.00 45.31 2.85
3051 4464 2.807967 CAATGATTCTGGTGTGTCACGT 59.192 45.455 0.00 0.00 34.83 4.49
3056 4469 1.203038 TGGGCAATGATTCTGGTGTGT 60.203 47.619 0.00 0.00 0.00 3.72
3064 4477 3.825014 AGCATCATACTGGGCAATGATTC 59.175 43.478 0.00 0.00 40.10 2.52
3117 4539 4.062991 GGTACAACAAACAGGACCTGTAG 58.937 47.826 27.37 23.10 44.62 2.74
3160 4582 1.002624 TTGACCGCCTGATGGGTTC 60.003 57.895 0.00 0.00 36.46 3.62
3188 4610 0.609131 CCCTTCTGCAACCCATCGTT 60.609 55.000 0.00 0.00 33.90 3.85
3229 4651 0.472734 ACCACTGAAGAGGACCAGCT 60.473 55.000 0.41 0.00 33.90 4.24
3248 4670 4.909696 TCAAAACATTTCTCGGCTTCAA 57.090 36.364 0.00 0.00 0.00 2.69
3301 4723 2.256306 TCCAGTAGCACCAATGTCAGA 58.744 47.619 0.00 0.00 0.00 3.27
3456 4889 2.493035 TCAATTGTTTCAGAGCTGCGA 58.507 42.857 5.13 0.00 0.00 5.10
3483 4916 6.828273 TGGAGAACTGAGATGACTTTTTCAAA 59.172 34.615 0.00 0.00 37.92 2.69
3513 4955 7.151694 ACAGCCTTCTAGATCTAGTACCTTA 57.848 40.000 25.54 6.12 34.84 2.69
3519 4961 4.159244 ACGACAGCCTTCTAGATCTAGT 57.841 45.455 25.54 8.70 34.84 2.57
3548 4990 2.706190 AGGTAGCACTGGTTCTTCTGTT 59.294 45.455 0.00 0.00 0.00 3.16
3549 4991 2.037772 CAGGTAGCACTGGTTCTTCTGT 59.962 50.000 0.00 0.00 34.84 3.41
3550 4992 2.300152 TCAGGTAGCACTGGTTCTTCTG 59.700 50.000 0.00 0.00 38.98 3.02
3594 5036 4.691175 TCAAGCTGAGATACTTGAGCATC 58.309 43.478 1.49 0.00 45.48 3.91
3613 5055 2.901192 TGGTAACATCCGTTCTCCTCAA 59.099 45.455 0.00 0.00 46.17 3.02
3636 5079 2.542020 TGTTGATTTCACTCGGCAGA 57.458 45.000 0.00 0.00 0.00 4.26
3642 5085 6.746364 GCTCATGAAGATTGTTGATTTCACTC 59.254 38.462 0.00 0.00 32.90 3.51
3710 5153 2.576615 GGAGCAGGACAGTTCTTGTTT 58.423 47.619 0.00 0.00 41.05 2.83
3784 5227 3.149196 TGCTTGGACTTGGATCAACTTC 58.851 45.455 0.00 0.00 0.00 3.01
3786 5229 2.107204 ACTGCTTGGACTTGGATCAACT 59.893 45.455 0.00 0.00 0.00 3.16
3793 5236 1.625818 AGTAGGACTGCTTGGACTTGG 59.374 52.381 0.00 0.00 0.00 3.61
3812 5255 0.322975 CTGGACACTGGGGAAGTCAG 59.677 60.000 0.00 0.00 36.83 3.51
3854 5297 0.256464 CGGTACCTCCAGACTCTCCT 59.744 60.000 10.90 0.00 35.57 3.69
3859 5302 0.830444 TTGCACGGTACCTCCAGACT 60.830 55.000 10.90 0.00 35.57 3.24
3862 5305 0.036388 ACATTGCACGGTACCTCCAG 60.036 55.000 10.90 0.00 35.57 3.86
3913 5356 3.441572 GGACTTGAATCAACATGACCAGG 59.558 47.826 0.00 0.00 33.09 4.45
4019 5471 8.498054 TCCAATATCTTTCAAGTCTTGATGAC 57.502 34.615 15.95 0.00 45.67 3.06
4071 5523 3.679980 CACTCTCCTTGTTGATAACCACG 59.320 47.826 0.00 0.00 0.00 4.94
4114 5566 7.554118 GGACTGTTTTAGGAGATCATTGATTGA 59.446 37.037 0.00 0.00 39.12 2.57
4121 5573 4.410555 GGAGGGACTGTTTTAGGAGATCAT 59.589 45.833 0.00 0.00 41.55 2.45
4125 5577 2.176889 CGGAGGGACTGTTTTAGGAGA 58.823 52.381 0.00 0.00 41.55 3.71
4172 5624 4.645535 TGATGAAGAGCCCTTGTATATGC 58.354 43.478 0.00 0.00 31.62 3.14
4189 5641 2.228545 ACCAGACTCAGCTCTGATGA 57.771 50.000 2.40 0.00 40.28 2.92
4222 5677 8.107729 TCCATTTATAGTTAGGCTCTCGAGATA 58.892 37.037 17.03 2.51 0.00 1.98
4227 5682 5.635700 GCTTCCATTTATAGTTAGGCTCTCG 59.364 44.000 0.00 0.00 0.00 4.04
4266 5721 3.001634 CCATATGTGTGCTAGTGCTTTCG 59.998 47.826 1.24 0.00 40.48 3.46
4294 5773 9.768662 GCCATTATTGGTCAATAATTCAAGAAT 57.231 29.630 20.18 3.34 46.26 2.40
4320 5808 6.575162 AGAGTTACCTTGGCAAGTTTATTG 57.425 37.500 24.57 11.36 0.00 1.90
4324 5812 5.691896 ACTTAGAGTTACCTTGGCAAGTTT 58.308 37.500 24.57 14.08 0.00 2.66
4371 5859 2.440409 AGCTTGGCAAGTACATTCAGG 58.560 47.619 26.71 0.29 0.00 3.86
4377 5865 2.878406 GTTCTCAAGCTTGGCAAGTACA 59.122 45.455 26.71 9.18 0.00 2.90
4380 5868 2.355010 AGTTCTCAAGCTTGGCAAGT 57.645 45.000 26.71 17.28 0.00 3.16
4435 5923 5.881443 CCTCTTTGAAGATGAGATTGCTCTT 59.119 40.000 0.00 0.00 41.84 2.85
4443 5931 5.768980 ATTCACCCTCTTTGAAGATGAGA 57.231 39.130 0.00 0.00 36.44 3.27
4456 5944 5.707298 TGTTGAGATTCTTGAATTCACCCTC 59.293 40.000 7.89 10.38 0.00 4.30
4551 6039 2.621526 GTTGGTGGAGGACAAAACGATT 59.378 45.455 0.00 0.00 0.00 3.34
4579 6067 7.792032 TGAAGGTAATTAACTCCACTGATAGG 58.208 38.462 2.85 0.00 0.00 2.57
4593 6081 7.673926 AGCTCCTCCAAATTTTGAAGGTAATTA 59.326 33.333 13.40 0.00 0.00 1.40
4596 6084 5.393866 AGCTCCTCCAAATTTTGAAGGTAA 58.606 37.500 13.40 0.00 0.00 2.85
4630 6118 1.542915 CCTGCCCTTGTTCTTGATGTG 59.457 52.381 0.00 0.00 0.00 3.21
4649 6137 5.062558 GCATTGTGAAGTAATGAATGCAACC 59.937 40.000 0.00 0.00 45.33 3.77
4666 6154 2.682352 TGGTTATGTGATCGGCATTGTG 59.318 45.455 7.71 0.00 0.00 3.33
4677 6165 2.871096 GGGTCACCTTGGTTATGTGA 57.129 50.000 0.00 0.00 36.71 3.58
4695 6183 2.868583 CTCCAGCAATGTATCACGAAGG 59.131 50.000 0.00 0.00 0.00 3.46
4720 6208 1.213926 GGCCAGGATTTCCAGATCACT 59.786 52.381 0.00 0.00 38.89 3.41
4737 6225 1.202405 CGCATATTTGGTTTCTGGGCC 60.202 52.381 0.00 0.00 0.00 5.80
4743 6231 2.276472 TGCAGCGCATATTTGGTTTC 57.724 45.000 11.47 0.00 31.71 2.78
4780 6268 5.246203 TGTTCAAGATAAGCTGACTACCAGT 59.754 40.000 0.00 0.00 44.71 4.00
4800 6294 6.695278 TGACGTTTTGGAATTCATCTTTGTTC 59.305 34.615 7.93 0.00 0.00 3.18
4821 6315 2.921754 GTCGACAATAGGAAGGTTGACG 59.078 50.000 11.55 4.18 42.05 4.35
4822 6316 3.921677 TGTCGACAATAGGAAGGTTGAC 58.078 45.455 17.62 0.00 43.24 3.18
4832 6326 5.347907 GGTGTAGGAAGTTTGTCGACAATAG 59.652 44.000 30.10 0.00 35.55 1.73
4860 6459 1.271379 ACAATGCCACCGTTTAGCTCT 60.271 47.619 0.00 0.00 0.00 4.09
4866 6465 1.152830 AGGGACAATGCCACCGTTT 59.847 52.632 0.00 0.00 0.00 3.60
4905 6513 4.894784 TCTACCTAGCTTCTGGTGTTTTG 58.105 43.478 13.74 2.73 37.74 2.44
4912 6520 2.393646 AGGCTTCTACCTAGCTTCTGG 58.606 52.381 0.00 0.00 38.67 3.86
4913 6521 3.449018 TCAAGGCTTCTACCTAGCTTCTG 59.551 47.826 0.00 0.00 39.93 3.02
4914 6522 3.449377 GTCAAGGCTTCTACCTAGCTTCT 59.551 47.826 0.00 0.00 39.93 2.85
4915 6523 3.449377 AGTCAAGGCTTCTACCTAGCTTC 59.551 47.826 0.00 0.00 39.93 3.86
4916 6524 3.445987 AGTCAAGGCTTCTACCTAGCTT 58.554 45.455 0.00 0.00 39.93 3.74
4918 6526 2.223618 CGAGTCAAGGCTTCTACCTAGC 60.224 54.545 0.00 0.00 39.93 3.42
4923 6531 3.057456 TCTGTTCGAGTCAAGGCTTCTAC 60.057 47.826 0.00 0.00 0.00 2.59
4924 6532 3.154710 TCTGTTCGAGTCAAGGCTTCTA 58.845 45.455 0.00 0.00 0.00 2.10
4927 6535 1.964223 TCTCTGTTCGAGTCAAGGCTT 59.036 47.619 0.00 0.00 40.75 4.35
4930 6538 2.734079 GCTTTCTCTGTTCGAGTCAAGG 59.266 50.000 0.00 0.00 40.75 3.61
4938 6546 4.214119 TGATTTTCTGGCTTTCTCTGTTCG 59.786 41.667 0.00 0.00 0.00 3.95
4939 6547 5.695851 TGATTTTCTGGCTTTCTCTGTTC 57.304 39.130 0.00 0.00 0.00 3.18
4942 6550 5.335504 GGTCTTGATTTTCTGGCTTTCTCTG 60.336 44.000 0.00 0.00 0.00 3.35
4943 6551 4.764308 GGTCTTGATTTTCTGGCTTTCTCT 59.236 41.667 0.00 0.00 0.00 3.10
4944 6552 4.520492 TGGTCTTGATTTTCTGGCTTTCTC 59.480 41.667 0.00 0.00 0.00 2.87
4971 6585 3.003378 CCGGTTCTCTTGTGTTTCCTTTC 59.997 47.826 0.00 0.00 0.00 2.62
5040 6654 1.564348 GAAGGCCTTCAATACCTCCCA 59.436 52.381 35.71 0.00 39.31 4.37
5049 6663 3.394606 AGAAGTAACAGGAAGGCCTTCAA 59.605 43.478 39.29 20.17 43.90 2.69
5062 6676 5.637810 GTGATGATGAACGGAAGAAGTAACA 59.362 40.000 0.00 0.00 0.00 2.41
5075 6689 1.065199 TGGCAGGAGGTGATGATGAAC 60.065 52.381 0.00 0.00 0.00 3.18
5086 6700 0.548031 ACACATACCATGGCAGGAGG 59.452 55.000 13.04 0.67 33.60 4.30
5087 6701 2.424601 CAAACACATACCATGGCAGGAG 59.575 50.000 13.04 1.31 33.60 3.69
5130 6744 5.005779 CACTCAGTAGACAGAAACACACAAC 59.994 44.000 0.00 0.00 0.00 3.32
5171 6786 2.159476 CCACTCAAATCAATCCGCACAG 60.159 50.000 0.00 0.00 0.00 3.66
5177 6792 3.157087 ACCACACCACTCAAATCAATCC 58.843 45.455 0.00 0.00 0.00 3.01
5240 6894 4.169059 ACCATTATGCTCAGCCACAATA 57.831 40.909 0.00 0.00 0.00 1.90
5248 6902 5.731406 GCATACACACAACCATTATGCTCAG 60.731 44.000 4.93 0.00 41.14 3.35
5277 6931 3.456380 AAGCCACACAAATCCATACCT 57.544 42.857 0.00 0.00 0.00 3.08
5281 6935 2.827921 GAGGAAAGCCACACAAATCCAT 59.172 45.455 0.00 0.00 36.29 3.41
5435 7107 1.865340 GGCTGGTAGCTGCGTTATTAC 59.135 52.381 16.20 0.00 41.99 1.89
5484 7156 6.815641 TGCATTAAAACAAACTCTGCTTCAAA 59.184 30.769 0.00 0.00 0.00 2.69
5499 7171 7.094634 TGAGAAACCTCTGATCTGCATTAAAAC 60.095 37.037 0.00 0.00 29.54 2.43
5500 7172 6.942005 TGAGAAACCTCTGATCTGCATTAAAA 59.058 34.615 0.00 0.00 29.54 1.52
5501 7173 6.475504 TGAGAAACCTCTGATCTGCATTAAA 58.524 36.000 0.00 0.00 29.54 1.52
5502 7174 6.053632 TGAGAAACCTCTGATCTGCATTAA 57.946 37.500 0.00 0.00 29.54 1.40
5533 7205 4.262808 GCACTAGCTATGGTGAAGATGGAT 60.263 45.833 15.35 0.00 40.16 3.41
5543 7215 1.681793 CAGTACCGCACTAGCTATGGT 59.318 52.381 10.69 10.69 39.10 3.55
5546 7218 3.181478 GGTTTCAGTACCGCACTAGCTAT 60.181 47.826 0.00 0.00 39.10 2.97
5570 7242 7.336679 CAGTGATGACTTACATAAAACCATGGA 59.663 37.037 21.47 0.00 39.56 3.41
5571 7243 7.336679 TCAGTGATGACTTACATAAAACCATGG 59.663 37.037 11.19 11.19 39.56 3.66
5602 7274 2.490991 ACCGACCTAGCTGTTTTTCAC 58.509 47.619 0.00 0.00 0.00 3.18
5606 7278 4.313282 GACTTTACCGACCTAGCTGTTTT 58.687 43.478 0.00 0.00 0.00 2.43
5610 7287 1.471684 ACGACTTTACCGACCTAGCTG 59.528 52.381 0.00 0.00 0.00 4.24
5614 7291 2.610232 GGCAAACGACTTTACCGACCTA 60.610 50.000 0.00 0.00 0.00 3.08
5629 7306 7.532682 TGAAACTTCTGTTTATTTGGCAAAC 57.467 32.000 16.00 3.62 45.36 2.93
5632 7309 8.296713 GTCTATGAAACTTCTGTTTATTTGGCA 58.703 33.333 0.00 0.00 45.36 4.92
5723 7400 3.375299 CCATTTCCGAACAGGCTCTAAAG 59.625 47.826 0.00 0.00 40.77 1.85
5724 7401 3.244770 ACCATTTCCGAACAGGCTCTAAA 60.245 43.478 0.00 0.00 40.77 1.85
5725 7402 2.304761 ACCATTTCCGAACAGGCTCTAA 59.695 45.455 0.00 0.00 40.77 2.10
5726 7403 1.906574 ACCATTTCCGAACAGGCTCTA 59.093 47.619 0.00 0.00 40.77 2.43
5727 7404 0.693049 ACCATTTCCGAACAGGCTCT 59.307 50.000 0.00 0.00 40.77 4.09
5728 7405 1.087501 GACCATTTCCGAACAGGCTC 58.912 55.000 0.00 0.00 40.77 4.70
5729 7406 0.322546 GGACCATTTCCGAACAGGCT 60.323 55.000 0.00 0.00 40.77 4.58
5730 7407 2.180674 GGACCATTTCCGAACAGGC 58.819 57.895 0.00 0.00 40.77 4.85
5738 7415 0.915364 AGAGGAGCTGGACCATTTCC 59.085 55.000 13.95 13.95 46.13 3.13
5739 7416 1.556911 TCAGAGGAGCTGGACCATTTC 59.443 52.381 0.00 0.00 44.98 2.17
5740 7417 1.661463 TCAGAGGAGCTGGACCATTT 58.339 50.000 0.00 0.00 44.98 2.32
5741 7418 1.661463 TTCAGAGGAGCTGGACCATT 58.339 50.000 0.00 0.00 44.98 3.16
5742 7419 1.890552 ATTCAGAGGAGCTGGACCAT 58.109 50.000 0.00 0.00 44.98 3.55
5743 7420 1.556911 GAATTCAGAGGAGCTGGACCA 59.443 52.381 0.00 0.00 44.98 4.02
5744 7421 1.836802 AGAATTCAGAGGAGCTGGACC 59.163 52.381 8.44 0.00 44.98 4.46
5745 7422 2.499289 TGAGAATTCAGAGGAGCTGGAC 59.501 50.000 8.44 0.00 44.98 4.02
5746 7423 2.825223 TGAGAATTCAGAGGAGCTGGA 58.175 47.619 8.44 0.00 44.98 3.86
5747 7424 3.055240 AGTTGAGAATTCAGAGGAGCTGG 60.055 47.826 8.44 0.00 44.98 4.85
5748 7425 4.183101 GAGTTGAGAATTCAGAGGAGCTG 58.817 47.826 8.44 0.00 46.31 4.24
5749 7426 3.197549 GGAGTTGAGAATTCAGAGGAGCT 59.802 47.826 8.44 0.00 34.15 4.09
5750 7427 3.530535 GGAGTTGAGAATTCAGAGGAGC 58.469 50.000 8.44 0.00 34.15 4.70
5751 7428 3.517100 TGGGAGTTGAGAATTCAGAGGAG 59.483 47.826 8.44 0.00 34.15 3.69
5752 7429 3.261897 GTGGGAGTTGAGAATTCAGAGGA 59.738 47.826 8.44 0.00 34.15 3.71
5753 7430 3.262915 AGTGGGAGTTGAGAATTCAGAGG 59.737 47.826 8.44 0.00 34.15 3.69
5754 7431 4.502962 GAGTGGGAGTTGAGAATTCAGAG 58.497 47.826 8.44 0.00 34.15 3.35
5755 7432 3.261897 GGAGTGGGAGTTGAGAATTCAGA 59.738 47.826 8.44 0.00 34.15 3.27
5756 7433 3.262915 AGGAGTGGGAGTTGAGAATTCAG 59.737 47.826 8.44 0.00 34.15 3.02
5757 7434 3.251484 AGGAGTGGGAGTTGAGAATTCA 58.749 45.455 8.44 0.00 0.00 2.57
5758 7435 3.369997 GGAGGAGTGGGAGTTGAGAATTC 60.370 52.174 0.00 0.00 0.00 2.17
5759 7436 2.573915 GGAGGAGTGGGAGTTGAGAATT 59.426 50.000 0.00 0.00 0.00 2.17
5760 7437 2.192263 GGAGGAGTGGGAGTTGAGAAT 58.808 52.381 0.00 0.00 0.00 2.40
5761 7438 1.132849 TGGAGGAGTGGGAGTTGAGAA 60.133 52.381 0.00 0.00 0.00 2.87
5762 7439 0.487325 TGGAGGAGTGGGAGTTGAGA 59.513 55.000 0.00 0.00 0.00 3.27
5763 7440 1.484240 GATGGAGGAGTGGGAGTTGAG 59.516 57.143 0.00 0.00 0.00 3.02
5764 7441 1.573108 GATGGAGGAGTGGGAGTTGA 58.427 55.000 0.00 0.00 0.00 3.18
5765 7442 0.543749 GGATGGAGGAGTGGGAGTTG 59.456 60.000 0.00 0.00 0.00 3.16
5766 7443 0.119155 TGGATGGAGGAGTGGGAGTT 59.881 55.000 0.00 0.00 0.00 3.01
5767 7444 0.119155 TTGGATGGAGGAGTGGGAGT 59.881 55.000 0.00 0.00 0.00 3.85
5768 7445 0.835941 CTTGGATGGAGGAGTGGGAG 59.164 60.000 0.00 0.00 0.00 4.30
5769 7446 0.417437 TCTTGGATGGAGGAGTGGGA 59.583 55.000 0.00 0.00 0.00 4.37
5770 7447 1.142465 CATCTTGGATGGAGGAGTGGG 59.858 57.143 0.05 0.00 0.00 4.61
5771 7448 1.476471 GCATCTTGGATGGAGGAGTGG 60.476 57.143 9.18 0.00 0.00 4.00
5772 7449 1.489649 AGCATCTTGGATGGAGGAGTG 59.510 52.381 9.18 0.00 0.00 3.51
5773 7450 1.489649 CAGCATCTTGGATGGAGGAGT 59.510 52.381 9.18 0.00 0.00 3.85
5774 7451 1.814634 GCAGCATCTTGGATGGAGGAG 60.815 57.143 9.18 0.00 0.00 3.69
5775 7452 0.182061 GCAGCATCTTGGATGGAGGA 59.818 55.000 9.18 0.00 0.00 3.71
5776 7453 0.183014 AGCAGCATCTTGGATGGAGG 59.817 55.000 9.18 0.00 0.00 4.30
5777 7454 1.595466 GAGCAGCATCTTGGATGGAG 58.405 55.000 9.18 0.00 0.00 3.86
5778 7455 0.182061 GGAGCAGCATCTTGGATGGA 59.818 55.000 9.18 0.00 0.00 3.41
5779 7456 0.183014 AGGAGCAGCATCTTGGATGG 59.817 55.000 9.18 0.00 0.00 3.51
5780 7457 1.676529 CAAGGAGCAGCATCTTGGATG 59.323 52.381 15.88 3.44 35.53 3.51
5781 7458 1.284198 ACAAGGAGCAGCATCTTGGAT 59.716 47.619 23.20 8.18 41.35 3.41
5782 7459 0.694771 ACAAGGAGCAGCATCTTGGA 59.305 50.000 23.20 0.00 41.35 3.53
5783 7460 2.408271 TACAAGGAGCAGCATCTTGG 57.592 50.000 23.20 11.40 41.35 3.61
5784 7461 4.771590 TTTTACAAGGAGCAGCATCTTG 57.228 40.909 19.87 19.87 42.37 3.02
5785 7462 4.829492 ACTTTTTACAAGGAGCAGCATCTT 59.171 37.500 0.00 0.00 0.00 2.40
5786 7463 4.401925 ACTTTTTACAAGGAGCAGCATCT 58.598 39.130 0.00 0.00 0.00 2.90
5787 7464 4.773323 ACTTTTTACAAGGAGCAGCATC 57.227 40.909 0.00 0.00 0.00 3.91
5788 7465 5.886960 CTACTTTTTACAAGGAGCAGCAT 57.113 39.130 0.00 0.00 0.00 3.79
5794 7471 3.994392 TCAGCGCTACTTTTTACAAGGAG 59.006 43.478 10.99 0.00 0.00 3.69
5795 7472 3.997762 TCAGCGCTACTTTTTACAAGGA 58.002 40.909 10.99 0.00 0.00 3.36
5796 7473 4.742438 TTCAGCGCTACTTTTTACAAGG 57.258 40.909 10.99 0.00 0.00 3.61
5818 7495 1.802508 GCTGCTTGCCGAACAGTTTTT 60.803 47.619 0.00 0.00 33.87 1.94
5819 7496 0.249031 GCTGCTTGCCGAACAGTTTT 60.249 50.000 0.00 0.00 33.87 2.43
5820 7497 1.103398 AGCTGCTTGCCGAACAGTTT 61.103 50.000 0.00 0.00 44.23 2.66
5821 7498 1.103398 AAGCTGCTTGCCGAACAGTT 61.103 50.000 15.16 0.00 44.23 3.16
5822 7499 1.510480 GAAGCTGCTTGCCGAACAGT 61.510 55.000 21.25 0.00 44.23 3.55
5823 7500 1.208614 GAAGCTGCTTGCCGAACAG 59.791 57.895 21.25 0.00 44.23 3.16
5824 7501 2.606961 CGAAGCTGCTTGCCGAACA 61.607 57.895 21.25 0.00 44.23 3.18
5825 7502 2.174349 CGAAGCTGCTTGCCGAAC 59.826 61.111 21.25 2.92 44.23 3.95
5838 7515 1.554392 CTCGTGAATCAGGAGCGAAG 58.446 55.000 18.26 0.00 39.04 3.79
5839 7516 0.173481 CCTCGTGAATCAGGAGCGAA 59.827 55.000 23.16 0.00 42.71 4.70
5840 7517 0.679960 TCCTCGTGAATCAGGAGCGA 60.680 55.000 23.16 18.72 42.71 4.93
5841 7518 1.809869 TCCTCGTGAATCAGGAGCG 59.190 57.895 23.16 17.14 42.71 5.03
5844 7521 1.769026 CCTCTCCTCGTGAATCAGGA 58.231 55.000 5.49 5.49 37.27 3.86
5845 7522 0.103937 GCCTCTCCTCGTGAATCAGG 59.896 60.000 0.00 0.00 0.00 3.86
5846 7523 0.820226 TGCCTCTCCTCGTGAATCAG 59.180 55.000 0.00 0.00 0.00 2.90
5847 7524 0.820226 CTGCCTCTCCTCGTGAATCA 59.180 55.000 0.00 0.00 0.00 2.57
5848 7525 1.107114 TCTGCCTCTCCTCGTGAATC 58.893 55.000 0.00 0.00 0.00 2.52
5849 7526 1.205893 GTTCTGCCTCTCCTCGTGAAT 59.794 52.381 0.00 0.00 0.00 2.57
5850 7527 0.603569 GTTCTGCCTCTCCTCGTGAA 59.396 55.000 0.00 0.00 0.00 3.18
5851 7528 1.251527 GGTTCTGCCTCTCCTCGTGA 61.252 60.000 0.00 0.00 0.00 4.35
5852 7529 1.216710 GGTTCTGCCTCTCCTCGTG 59.783 63.158 0.00 0.00 0.00 4.35
5853 7530 2.344203 CGGTTCTGCCTCTCCTCGT 61.344 63.158 0.00 0.00 34.25 4.18
5854 7531 1.030488 TACGGTTCTGCCTCTCCTCG 61.030 60.000 0.00 0.00 34.25 4.63
5855 7532 1.404843 ATACGGTTCTGCCTCTCCTC 58.595 55.000 0.00 0.00 34.25 3.71
5856 7533 2.588620 CTATACGGTTCTGCCTCTCCT 58.411 52.381 0.00 0.00 34.25 3.69
5857 7534 1.614413 CCTATACGGTTCTGCCTCTCC 59.386 57.143 0.00 0.00 34.25 3.71
5858 7535 1.000052 GCCTATACGGTTCTGCCTCTC 60.000 57.143 0.00 0.00 34.25 3.20
5859 7536 1.041437 GCCTATACGGTTCTGCCTCT 58.959 55.000 0.00 0.00 34.25 3.69
5860 7537 0.318784 CGCCTATACGGTTCTGCCTC 60.319 60.000 0.00 0.00 34.25 4.70
5861 7538 0.754217 TCGCCTATACGGTTCTGCCT 60.754 55.000 0.00 0.00 34.25 4.75
5862 7539 0.318784 CTCGCCTATACGGTTCTGCC 60.319 60.000 0.00 0.00 34.25 4.85
5863 7540 0.940047 GCTCGCCTATACGGTTCTGC 60.940 60.000 0.00 0.00 34.25 4.26
5864 7541 0.660595 CGCTCGCCTATACGGTTCTG 60.661 60.000 0.00 0.00 34.25 3.02
5865 7542 0.816825 TCGCTCGCCTATACGGTTCT 60.817 55.000 0.00 0.00 34.25 3.01
5866 7543 0.385723 CTCGCTCGCCTATACGGTTC 60.386 60.000 0.00 0.00 34.25 3.62
5867 7544 1.099879 ACTCGCTCGCCTATACGGTT 61.100 55.000 0.00 0.00 34.25 4.44
5868 7545 1.505477 GACTCGCTCGCCTATACGGT 61.505 60.000 0.00 0.00 34.25 4.83
5869 7546 1.207085 GACTCGCTCGCCTATACGG 59.793 63.158 0.00 0.00 0.00 4.02
5870 7547 1.154635 CGACTCGCTCGCCTATACG 60.155 63.158 0.00 0.00 35.06 3.06
5871 7548 1.207085 CCGACTCGCTCGCCTATAC 59.793 63.158 0.00 0.00 41.46 1.47
5872 7549 1.964891 CCCGACTCGCTCGCCTATA 60.965 63.158 0.00 0.00 41.46 1.31
5873 7550 3.288290 CCCGACTCGCTCGCCTAT 61.288 66.667 0.00 0.00 41.46 2.57
5894 7571 3.263503 GAAAACGGGTTGAGCGGCC 62.264 63.158 0.00 0.00 0.00 6.13
5895 7572 2.254350 GAAAACGGGTTGAGCGGC 59.746 61.111 0.00 0.00 0.00 6.53
5896 7573 1.894756 TGGAAAACGGGTTGAGCGG 60.895 57.895 0.00 0.00 0.00 5.52
5897 7574 1.164041 AGTGGAAAACGGGTTGAGCG 61.164 55.000 0.00 0.00 0.00 5.03
5898 7575 1.029681 AAGTGGAAAACGGGTTGAGC 58.970 50.000 0.00 0.00 0.00 4.26
5899 7576 1.336755 CCAAGTGGAAAACGGGTTGAG 59.663 52.381 0.00 0.00 37.39 3.02
5900 7577 1.394618 CCAAGTGGAAAACGGGTTGA 58.605 50.000 0.00 0.00 37.39 3.18
5901 7578 0.249280 GCCAAGTGGAAAACGGGTTG 60.249 55.000 0.18 0.00 37.39 3.77
5902 7579 1.730451 CGCCAAGTGGAAAACGGGTT 61.730 55.000 0.18 0.00 37.39 4.11
5903 7580 2.190841 CGCCAAGTGGAAAACGGGT 61.191 57.895 0.18 0.00 37.39 5.28
5904 7581 2.642700 CGCCAAGTGGAAAACGGG 59.357 61.111 0.18 0.00 37.39 5.28
5905 7582 2.190841 ACCGCCAAGTGGAAAACGG 61.191 57.895 11.24 11.24 41.10 4.44
5906 7583 1.008995 CACCGCCAAGTGGAAAACG 60.009 57.895 0.18 0.00 36.58 3.60


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.