Multiple sequence alignment - TraesCS2D01G592700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G592700 chr2D 100.000 4703 0 0 1 4703 647705549 647700847 0.000000e+00 8685
1 TraesCS2D01G592700 chr2D 96.923 195 6 0 2 196 498471454 498471648 1.260000e-85 327
2 TraesCS2D01G592700 chr2D 95.918 196 8 0 2 197 238959076 238958881 7.590000e-83 318
3 TraesCS2D01G592700 chr2D 88.889 180 20 0 3106 3285 636455230 636455051 6.130000e-54 222
4 TraesCS2D01G592700 chr2B 92.671 3534 163 41 339 3801 788143442 788146950 0.000000e+00 5003
5 TraesCS2D01G592700 chr2B 90.715 2251 131 28 2514 4703 788124909 788127142 0.000000e+00 2928
6 TraesCS2D01G592700 chr2B 85.553 886 93 12 3849 4703 788146954 788147835 0.000000e+00 894
7 TraesCS2D01G592700 chr2B 93.173 249 17 0 1792 2040 788124665 788124913 2.670000e-97 366
8 TraesCS2D01G592700 chr7D 96.891 193 6 0 1 193 574726927 574727119 1.630000e-84 324
9 TraesCS2D01G592700 chr1D 96.392 194 7 0 2 195 26486328 26486135 2.110000e-83 320
10 TraesCS2D01G592700 chr6B 95.477 199 9 0 1 199 347768436 347768634 7.590000e-83 318
11 TraesCS2D01G592700 chr6A 95.918 196 8 0 1 196 616131487 616131292 7.590000e-83 318
12 TraesCS2D01G592700 chr7B 95.455 198 9 0 1 198 692881643 692881446 2.730000e-82 316
13 TraesCS2D01G592700 chr7B 84.825 257 17 10 467 708 683233965 683234214 6.080000e-59 239
14 TraesCS2D01G592700 chr7A 95.477 199 8 1 1 198 538301829 538301631 2.730000e-82 316
15 TraesCS2D01G592700 chr3B 95.050 202 8 1 1 202 702857463 702857662 2.730000e-82 316
16 TraesCS2D01G592700 chr5B 82.550 149 22 4 1849 1995 613089091 613089237 1.370000e-25 128


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G592700 chr2D 647700847 647705549 4702 True 8685.0 8685 100.000 1 4703 1 chr2D.!!$R3 4702
1 TraesCS2D01G592700 chr2B 788143442 788147835 4393 False 2948.5 5003 89.112 339 4703 2 chr2B.!!$F2 4364
2 TraesCS2D01G592700 chr2B 788124665 788127142 2477 False 1647.0 2928 91.944 1792 4703 2 chr2B.!!$F1 2911

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
170 171 0.035317 GAGCACATGGACACCACTGA 59.965 55.0 0.00 0.00 35.80 3.41 F
171 172 0.035881 AGCACATGGACACCACTGAG 59.964 55.0 0.00 0.00 35.80 3.35 F
323 324 0.103026 CCTGTGCGCTGCTATAGACA 59.897 55.0 9.73 0.07 0.00 3.41 F
568 573 0.620556 ACTGGTGTAAGGGCTGATGG 59.379 55.0 0.00 0.00 0.00 3.51 F
2089 2136 0.605319 TGTACAAGAAGCAAGGGCCG 60.605 55.0 0.00 0.00 42.56 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1165 1212 0.250166 ATACGGGATTTACGCCTGGC 60.250 55.0 9.11 9.11 36.06 4.85 R
1218 1265 0.806102 GAGCGTCGCTGCCAAGATAA 60.806 55.0 27.16 0.00 39.88 1.75 R
1934 1981 0.875059 GAGAACCCCAGCGACAAAAG 59.125 55.0 0.00 0.00 0.00 2.27 R
2307 2354 1.156736 CGAATTCGCCTCCTGTTGTT 58.843 50.0 15.93 0.00 0.00 2.83 R
3974 4065 0.037232 TCAGAGAGAGTGCGAGACGA 60.037 55.0 0.00 0.00 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.094484 TGAATAAAATTGGGCGTCCCT 57.906 42.857 2.12 0.00 45.70 4.20
21 22 2.757868 TGAATAAAATTGGGCGTCCCTG 59.242 45.455 2.12 0.00 45.70 4.45
22 23 1.111277 ATAAAATTGGGCGTCCCTGC 58.889 50.000 2.12 0.00 45.70 4.85
40 41 3.000819 CGCCTGGTCCCACCTGTA 61.001 66.667 0.00 0.00 39.58 2.74
41 42 2.589157 CGCCTGGTCCCACCTGTAA 61.589 63.158 0.00 0.00 39.58 2.41
42 43 1.299976 GCCTGGTCCCACCTGTAAG 59.700 63.158 0.00 0.00 39.58 2.34
54 55 3.927555 CTGTAAGGGCCGAGTCAAA 57.072 52.632 0.00 0.00 0.00 2.69
55 56 2.178912 CTGTAAGGGCCGAGTCAAAA 57.821 50.000 0.00 0.00 0.00 2.44
56 57 2.076863 CTGTAAGGGCCGAGTCAAAAG 58.923 52.381 0.00 0.00 0.00 2.27
57 58 1.271163 TGTAAGGGCCGAGTCAAAAGG 60.271 52.381 0.00 0.00 0.00 3.11
58 59 1.061546 TAAGGGCCGAGTCAAAAGGT 58.938 50.000 0.00 0.00 0.00 3.50
59 60 0.185175 AAGGGCCGAGTCAAAAGGTT 59.815 50.000 0.00 0.00 0.00 3.50
60 61 0.537371 AGGGCCGAGTCAAAAGGTTG 60.537 55.000 0.00 0.00 35.95 3.77
61 62 0.536460 GGGCCGAGTCAAAAGGTTGA 60.536 55.000 0.00 0.00 41.57 3.18
72 73 4.945645 AGGTTGACCTGACGGAGA 57.054 55.556 0.97 0.00 46.55 3.71
73 74 2.352817 AGGTTGACCTGACGGAGAC 58.647 57.895 0.97 0.00 46.55 3.36
85 86 4.580835 GGAGACGGCTGAGTTCAC 57.419 61.111 0.00 0.00 0.00 3.18
86 87 1.666011 GGAGACGGCTGAGTTCACA 59.334 57.895 0.00 0.00 0.00 3.58
87 88 0.389166 GGAGACGGCTGAGTTCACAG 60.389 60.000 0.00 0.00 40.43 3.66
88 89 0.598562 GAGACGGCTGAGTTCACAGA 59.401 55.000 0.00 0.00 39.94 3.41
89 90 1.000163 GAGACGGCTGAGTTCACAGAA 60.000 52.381 0.00 0.00 39.94 3.02
90 91 1.140816 GACGGCTGAGTTCACAGAAC 58.859 55.000 0.00 1.77 39.94 3.01
91 92 0.597637 ACGGCTGAGTTCACAGAACG 60.598 55.000 0.00 0.00 41.62 3.95
92 93 0.318699 CGGCTGAGTTCACAGAACGA 60.319 55.000 0.00 0.00 39.88 3.85
93 94 1.423395 GGCTGAGTTCACAGAACGAG 58.577 55.000 0.00 6.07 39.94 4.18
94 95 1.269831 GGCTGAGTTCACAGAACGAGT 60.270 52.381 0.00 0.00 39.94 4.18
95 96 2.055100 GCTGAGTTCACAGAACGAGTC 58.945 52.381 0.00 0.00 39.94 3.36
96 97 2.311462 CTGAGTTCACAGAACGAGTCG 58.689 52.381 11.85 11.85 39.94 4.18
97 98 1.001706 TGAGTTCACAGAACGAGTCGG 60.002 52.381 18.30 0.82 0.00 4.79
98 99 1.001597 GAGTTCACAGAACGAGTCGGT 60.002 52.381 18.30 11.09 34.68 4.69
100 101 3.538841 CACAGAACGAGTCGGTGC 58.461 61.111 18.30 4.71 43.94 5.01
101 102 2.050351 ACAGAACGAGTCGGTGCG 60.050 61.111 18.30 5.86 32.93 5.34
102 103 3.470567 CAGAACGAGTCGGTGCGC 61.471 66.667 18.30 0.00 0.00 6.09
103 104 3.671411 AGAACGAGTCGGTGCGCT 61.671 61.111 18.30 0.26 0.00 5.92
104 105 3.173240 GAACGAGTCGGTGCGCTC 61.173 66.667 18.30 4.47 0.00 5.03
110 111 3.807538 GTCGGTGCGCTCGGACTA 61.808 66.667 30.82 9.86 36.67 2.59
111 112 3.506096 TCGGTGCGCTCGGACTAG 61.506 66.667 19.79 8.34 36.67 2.57
112 113 4.554363 CGGTGCGCTCGGACTAGG 62.554 72.222 9.73 0.84 36.67 3.02
113 114 4.208686 GGTGCGCTCGGACTAGGG 62.209 72.222 9.73 0.00 36.67 3.53
114 115 4.208686 GTGCGCTCGGACTAGGGG 62.209 72.222 9.73 0.00 33.56 4.79
117 118 3.458163 CGCTCGGACTAGGGGCAA 61.458 66.667 0.00 0.00 0.00 4.52
118 119 2.987125 GCTCGGACTAGGGGCAAA 59.013 61.111 0.00 0.00 0.00 3.68
119 120 1.298667 GCTCGGACTAGGGGCAAAA 59.701 57.895 0.00 0.00 0.00 2.44
120 121 1.025113 GCTCGGACTAGGGGCAAAAC 61.025 60.000 0.00 0.00 0.00 2.43
121 122 0.613777 CTCGGACTAGGGGCAAAACT 59.386 55.000 0.00 0.00 0.00 2.66
122 123 0.323629 TCGGACTAGGGGCAAAACTG 59.676 55.000 0.00 0.00 0.00 3.16
123 124 0.323629 CGGACTAGGGGCAAAACTGA 59.676 55.000 0.00 0.00 0.00 3.41
124 125 1.676014 CGGACTAGGGGCAAAACTGAG 60.676 57.143 0.00 0.00 0.00 3.35
125 126 1.454201 GACTAGGGGCAAAACTGAGC 58.546 55.000 0.00 0.00 0.00 4.26
126 127 0.771127 ACTAGGGGCAAAACTGAGCA 59.229 50.000 0.00 0.00 0.00 4.26
127 128 1.168714 CTAGGGGCAAAACTGAGCAC 58.831 55.000 0.00 0.00 0.00 4.40
128 129 0.476338 TAGGGGCAAAACTGAGCACA 59.524 50.000 0.00 0.00 35.37 4.57
129 130 0.396974 AGGGGCAAAACTGAGCACAA 60.397 50.000 0.00 0.00 35.37 3.33
130 131 0.681175 GGGGCAAAACTGAGCACAAT 59.319 50.000 0.00 0.00 35.37 2.71
131 132 1.070601 GGGGCAAAACTGAGCACAATT 59.929 47.619 0.00 0.00 35.37 2.32
132 133 2.407090 GGGCAAAACTGAGCACAATTC 58.593 47.619 0.00 0.00 33.42 2.17
133 134 2.224018 GGGCAAAACTGAGCACAATTCA 60.224 45.455 0.00 0.00 33.42 2.57
134 135 2.796593 GGCAAAACTGAGCACAATTCAC 59.203 45.455 0.00 0.00 0.00 3.18
135 136 3.446799 GCAAAACTGAGCACAATTCACA 58.553 40.909 0.00 0.00 0.00 3.58
136 137 4.053295 GCAAAACTGAGCACAATTCACAT 58.947 39.130 0.00 0.00 0.00 3.21
137 138 4.149396 GCAAAACTGAGCACAATTCACATC 59.851 41.667 0.00 0.00 0.00 3.06
138 139 5.526115 CAAAACTGAGCACAATTCACATCT 58.474 37.500 0.00 0.00 0.00 2.90
139 140 4.761235 AACTGAGCACAATTCACATCTG 57.239 40.909 0.00 0.00 0.00 2.90
140 141 4.011966 ACTGAGCACAATTCACATCTGA 57.988 40.909 0.00 0.00 0.00 3.27
141 142 4.001652 ACTGAGCACAATTCACATCTGAG 58.998 43.478 0.00 0.00 0.00 3.35
142 143 3.340928 TGAGCACAATTCACATCTGAGG 58.659 45.455 0.00 0.00 0.00 3.86
143 144 2.681848 GAGCACAATTCACATCTGAGGG 59.318 50.000 0.00 0.00 0.00 4.30
144 145 1.133790 GCACAATTCACATCTGAGGGC 59.866 52.381 0.00 0.00 0.00 5.19
145 146 2.439409 CACAATTCACATCTGAGGGCA 58.561 47.619 0.00 0.00 0.00 5.36
146 147 2.821378 CACAATTCACATCTGAGGGCAA 59.179 45.455 0.00 0.00 0.00 4.52
147 148 3.256383 CACAATTCACATCTGAGGGCAAA 59.744 43.478 0.00 0.00 0.00 3.68
148 149 3.896888 ACAATTCACATCTGAGGGCAAAA 59.103 39.130 0.00 0.00 0.00 2.44
149 150 4.240096 CAATTCACATCTGAGGGCAAAAC 58.760 43.478 0.00 0.00 0.00 2.43
150 151 1.909700 TCACATCTGAGGGCAAAACC 58.090 50.000 0.00 0.00 37.93 3.27
151 152 0.523072 CACATCTGAGGGCAAAACCG 59.477 55.000 0.00 0.00 40.62 4.44
152 153 0.400213 ACATCTGAGGGCAAAACCGA 59.600 50.000 0.00 0.00 40.62 4.69
153 154 1.089920 CATCTGAGGGCAAAACCGAG 58.910 55.000 0.00 0.00 40.62 4.63
154 155 0.678048 ATCTGAGGGCAAAACCGAGC 60.678 55.000 0.00 0.00 40.62 5.03
155 156 1.600636 CTGAGGGCAAAACCGAGCA 60.601 57.895 0.00 0.00 40.62 4.26
156 157 1.856265 CTGAGGGCAAAACCGAGCAC 61.856 60.000 0.00 0.00 40.62 4.40
157 158 1.896660 GAGGGCAAAACCGAGCACA 60.897 57.895 0.00 0.00 40.62 4.57
158 159 1.228552 AGGGCAAAACCGAGCACAT 60.229 52.632 0.00 0.00 40.62 3.21
159 160 1.080569 GGGCAAAACCGAGCACATG 60.081 57.895 0.00 0.00 40.62 3.21
160 161 1.080569 GGCAAAACCGAGCACATGG 60.081 57.895 0.00 0.00 0.00 3.66
161 162 1.523154 GGCAAAACCGAGCACATGGA 61.523 55.000 0.00 0.00 0.00 3.41
162 163 0.387239 GCAAAACCGAGCACATGGAC 60.387 55.000 0.00 0.00 0.00 4.02
163 164 0.950836 CAAAACCGAGCACATGGACA 59.049 50.000 0.00 0.00 0.00 4.02
164 165 0.951558 AAAACCGAGCACATGGACAC 59.048 50.000 0.00 0.00 0.00 3.67
165 166 0.889186 AAACCGAGCACATGGACACC 60.889 55.000 0.00 0.00 0.00 4.16
166 167 2.050836 AACCGAGCACATGGACACCA 62.051 55.000 0.00 0.00 38.19 4.17
167 168 2.034879 CCGAGCACATGGACACCAC 61.035 63.158 0.00 0.00 35.80 4.16
168 169 1.004560 CGAGCACATGGACACCACT 60.005 57.895 0.00 0.00 35.80 4.00
169 170 1.293963 CGAGCACATGGACACCACTG 61.294 60.000 0.00 0.00 35.80 3.66
170 171 0.035317 GAGCACATGGACACCACTGA 59.965 55.000 0.00 0.00 35.80 3.41
171 172 0.035881 AGCACATGGACACCACTGAG 59.964 55.000 0.00 0.00 35.80 3.35
172 173 0.957395 GCACATGGACACCACTGAGG 60.957 60.000 0.00 0.00 45.67 3.86
173 174 0.321919 CACATGGACACCACTGAGGG 60.322 60.000 0.00 0.00 43.89 4.30
174 175 1.377725 CATGGACACCACTGAGGGC 60.378 63.158 0.00 0.00 43.89 5.19
175 176 1.847506 ATGGACACCACTGAGGGCA 60.848 57.895 0.00 0.00 43.89 5.36
176 177 1.426251 ATGGACACCACTGAGGGCAA 61.426 55.000 0.00 0.00 43.89 4.52
177 178 1.150536 GGACACCACTGAGGGCAAA 59.849 57.895 0.00 0.00 43.89 3.68
178 179 0.467290 GGACACCACTGAGGGCAAAA 60.467 55.000 0.00 0.00 43.89 2.44
179 180 0.954452 GACACCACTGAGGGCAAAAG 59.046 55.000 0.00 0.00 43.89 2.27
180 181 0.468029 ACACCACTGAGGGCAAAAGG 60.468 55.000 0.00 0.00 43.89 3.11
181 182 0.178992 CACCACTGAGGGCAAAAGGA 60.179 55.000 0.00 0.00 43.89 3.36
182 183 0.779997 ACCACTGAGGGCAAAAGGAT 59.220 50.000 0.00 0.00 43.89 3.24
183 184 1.992557 ACCACTGAGGGCAAAAGGATA 59.007 47.619 0.00 0.00 43.89 2.59
184 185 2.378547 ACCACTGAGGGCAAAAGGATAA 59.621 45.455 0.00 0.00 43.89 1.75
185 186 3.011708 ACCACTGAGGGCAAAAGGATAAT 59.988 43.478 0.00 0.00 43.89 1.28
186 187 4.026052 CCACTGAGGGCAAAAGGATAATT 58.974 43.478 0.00 0.00 0.00 1.40
187 188 5.200483 CCACTGAGGGCAAAAGGATAATTA 58.800 41.667 0.00 0.00 0.00 1.40
188 189 5.656416 CCACTGAGGGCAAAAGGATAATTAA 59.344 40.000 0.00 0.00 0.00 1.40
189 190 6.405842 CCACTGAGGGCAAAAGGATAATTAAC 60.406 42.308 0.00 0.00 0.00 2.01
190 191 5.656859 ACTGAGGGCAAAAGGATAATTAACC 59.343 40.000 3.60 3.60 0.00 2.85
191 192 4.959839 TGAGGGCAAAAGGATAATTAACCC 59.040 41.667 8.09 3.96 34.91 4.11
192 193 5.220872 AGGGCAAAAGGATAATTAACCCT 57.779 39.130 8.09 6.12 40.37 4.34
193 194 6.068735 TGAGGGCAAAAGGATAATTAACCCTA 60.069 38.462 8.09 0.00 45.16 3.53
194 195 6.747931 AGGGCAAAAGGATAATTAACCCTAA 58.252 36.000 8.09 0.00 43.36 2.69
195 196 7.193338 AGGGCAAAAGGATAATTAACCCTAAA 58.807 34.615 8.09 0.00 43.36 1.85
196 197 7.849389 AGGGCAAAAGGATAATTAACCCTAAAT 59.151 33.333 8.09 0.00 43.36 1.40
197 198 9.150028 GGGCAAAAGGATAATTAACCCTAAATA 57.850 33.333 8.09 0.00 31.84 1.40
204 205 8.336987 AGGATAATTAACCCTAAATATGGAGGC 58.663 37.037 8.09 0.00 0.00 4.70
205 206 8.336987 GGATAATTAACCCTAAATATGGAGGCT 58.663 37.037 0.24 0.00 0.00 4.58
206 207 9.178758 GATAATTAACCCTAAATATGGAGGCTG 57.821 37.037 0.00 0.00 0.00 4.85
207 208 2.959465 ACCCTAAATATGGAGGCTGC 57.041 50.000 0.00 0.00 0.00 5.25
208 209 2.135189 ACCCTAAATATGGAGGCTGCA 58.865 47.619 12.23 12.23 0.00 4.41
209 210 2.513738 ACCCTAAATATGGAGGCTGCAA 59.486 45.455 14.16 2.95 0.00 4.08
210 211 2.887152 CCCTAAATATGGAGGCTGCAAC 59.113 50.000 14.16 0.00 0.00 4.17
211 212 3.435601 CCCTAAATATGGAGGCTGCAACT 60.436 47.826 14.16 0.00 0.00 3.16
212 213 3.567164 CCTAAATATGGAGGCTGCAACTG 59.433 47.826 14.16 0.62 0.00 3.16
213 214 2.814805 AATATGGAGGCTGCAACTGT 57.185 45.000 14.16 0.00 0.00 3.55
214 215 3.931907 AATATGGAGGCTGCAACTGTA 57.068 42.857 14.16 0.53 0.00 2.74
215 216 2.988010 TATGGAGGCTGCAACTGTAG 57.012 50.000 14.16 0.00 0.00 2.74
216 217 1.279496 ATGGAGGCTGCAACTGTAGA 58.721 50.000 14.16 0.00 0.00 2.59
217 218 1.055849 TGGAGGCTGCAACTGTAGAA 58.944 50.000 6.12 0.00 0.00 2.10
218 219 1.419762 TGGAGGCTGCAACTGTAGAAA 59.580 47.619 6.12 0.00 0.00 2.52
219 220 2.158682 TGGAGGCTGCAACTGTAGAAAA 60.159 45.455 6.12 0.00 0.00 2.29
220 221 3.084786 GGAGGCTGCAACTGTAGAAAAT 58.915 45.455 0.00 0.00 0.00 1.82
221 222 4.261801 GGAGGCTGCAACTGTAGAAAATA 58.738 43.478 0.00 0.00 0.00 1.40
222 223 4.884164 GGAGGCTGCAACTGTAGAAAATAT 59.116 41.667 0.00 0.00 0.00 1.28
223 224 5.220931 GGAGGCTGCAACTGTAGAAAATATG 60.221 44.000 0.00 0.00 0.00 1.78
224 225 5.500234 AGGCTGCAACTGTAGAAAATATGA 58.500 37.500 0.50 0.00 0.00 2.15
225 226 5.945784 AGGCTGCAACTGTAGAAAATATGAA 59.054 36.000 0.50 0.00 0.00 2.57
226 227 6.434028 AGGCTGCAACTGTAGAAAATATGAAA 59.566 34.615 0.50 0.00 0.00 2.69
227 228 7.123247 AGGCTGCAACTGTAGAAAATATGAAAT 59.877 33.333 0.50 0.00 0.00 2.17
228 229 8.405531 GGCTGCAACTGTAGAAAATATGAAATA 58.594 33.333 0.50 0.00 0.00 1.40
229 230 9.226345 GCTGCAACTGTAGAAAATATGAAATAC 57.774 33.333 0.00 0.00 0.00 1.89
230 231 9.722056 CTGCAACTGTAGAAAATATGAAATACC 57.278 33.333 0.00 0.00 0.00 2.73
231 232 9.237187 TGCAACTGTAGAAAATATGAAATACCA 57.763 29.630 0.00 0.00 0.00 3.25
235 236 9.354673 ACTGTAGAAAATATGAAATACCATGGG 57.645 33.333 18.09 0.00 0.00 4.00
236 237 8.704849 TGTAGAAAATATGAAATACCATGGGG 57.295 34.615 18.09 0.00 41.29 4.96
251 252 5.841957 CCATGGGGTCAAAAATCTTCTAG 57.158 43.478 2.85 0.00 0.00 2.43
252 253 4.646492 CCATGGGGTCAAAAATCTTCTAGG 59.354 45.833 2.85 0.00 0.00 3.02
253 254 5.264395 CATGGGGTCAAAAATCTTCTAGGT 58.736 41.667 0.00 0.00 0.00 3.08
254 255 6.423182 CATGGGGTCAAAAATCTTCTAGGTA 58.577 40.000 0.00 0.00 0.00 3.08
255 256 6.457159 TGGGGTCAAAAATCTTCTAGGTAA 57.543 37.500 0.00 0.00 0.00 2.85
256 257 7.039722 TGGGGTCAAAAATCTTCTAGGTAAT 57.960 36.000 0.00 0.00 0.00 1.89
257 258 7.116736 TGGGGTCAAAAATCTTCTAGGTAATC 58.883 38.462 0.00 0.00 0.00 1.75
258 259 7.036863 TGGGGTCAAAAATCTTCTAGGTAATCT 60.037 37.037 0.00 0.00 0.00 2.40
259 260 8.491958 GGGGTCAAAAATCTTCTAGGTAATCTA 58.508 37.037 0.00 0.00 0.00 1.98
260 261 9.901172 GGGTCAAAAATCTTCTAGGTAATCTAA 57.099 33.333 0.00 0.00 0.00 2.10
270 271 9.869667 TCTTCTAGGTAATCTAATAGAGTTGCT 57.130 33.333 0.00 0.00 0.00 3.91
272 273 9.869667 TTCTAGGTAATCTAATAGAGTTGCTCT 57.130 33.333 0.00 4.02 43.83 4.09
273 274 9.869667 TCTAGGTAATCTAATAGAGTTGCTCTT 57.130 33.333 3.87 0.00 41.50 2.85
274 275 9.906660 CTAGGTAATCTAATAGAGTTGCTCTTG 57.093 37.037 3.87 0.00 41.50 3.02
275 276 8.312669 AGGTAATCTAATAGAGTTGCTCTTGT 57.687 34.615 3.87 0.00 41.50 3.16
276 277 8.417884 AGGTAATCTAATAGAGTTGCTCTTGTC 58.582 37.037 3.87 0.00 41.50 3.18
277 278 8.417884 GGTAATCTAATAGAGTTGCTCTTGTCT 58.582 37.037 3.87 0.00 41.50 3.41
286 287 9.944376 ATAGAGTTGCTCTTGTCTATTTTAACA 57.056 29.630 3.87 0.00 41.50 2.41
287 288 8.854614 AGAGTTGCTCTTGTCTATTTTAACAT 57.145 30.769 0.00 0.00 37.60 2.71
288 289 8.940952 AGAGTTGCTCTTGTCTATTTTAACATC 58.059 33.333 0.00 0.00 37.60 3.06
289 290 8.621532 AGTTGCTCTTGTCTATTTTAACATCA 57.378 30.769 0.00 0.00 0.00 3.07
290 291 9.066892 AGTTGCTCTTGTCTATTTTAACATCAA 57.933 29.630 0.00 0.00 0.00 2.57
291 292 9.118236 GTTGCTCTTGTCTATTTTAACATCAAC 57.882 33.333 0.00 0.00 0.00 3.18
292 293 8.621532 TGCTCTTGTCTATTTTAACATCAACT 57.378 30.769 0.00 0.00 0.00 3.16
293 294 9.719355 TGCTCTTGTCTATTTTAACATCAACTA 57.281 29.630 0.00 0.00 0.00 2.24
309 310 8.948631 ACATCAACTATCACTAAATACCTGTG 57.051 34.615 0.00 0.00 0.00 3.66
310 311 7.495934 ACATCAACTATCACTAAATACCTGTGC 59.504 37.037 0.00 0.00 0.00 4.57
311 312 6.040247 TCAACTATCACTAAATACCTGTGCG 58.960 40.000 0.00 0.00 0.00 5.34
312 313 4.369182 ACTATCACTAAATACCTGTGCGC 58.631 43.478 0.00 0.00 0.00 6.09
313 314 3.543680 ATCACTAAATACCTGTGCGCT 57.456 42.857 9.73 0.00 0.00 5.92
314 315 2.616960 TCACTAAATACCTGTGCGCTG 58.383 47.619 9.73 0.00 0.00 5.18
315 316 1.062587 CACTAAATACCTGTGCGCTGC 59.937 52.381 9.73 1.68 0.00 5.25
316 317 1.066143 ACTAAATACCTGTGCGCTGCT 60.066 47.619 9.73 0.00 0.00 4.24
317 318 2.167693 ACTAAATACCTGTGCGCTGCTA 59.832 45.455 9.73 0.00 0.00 3.49
318 319 2.332063 AAATACCTGTGCGCTGCTAT 57.668 45.000 9.73 0.00 0.00 2.97
319 320 3.469008 AAATACCTGTGCGCTGCTATA 57.531 42.857 9.73 0.00 0.00 1.31
320 321 2.732412 ATACCTGTGCGCTGCTATAG 57.268 50.000 9.73 0.00 0.00 1.31
321 322 1.687563 TACCTGTGCGCTGCTATAGA 58.312 50.000 9.73 0.00 0.00 1.98
322 323 0.103208 ACCTGTGCGCTGCTATAGAC 59.897 55.000 9.73 0.00 0.00 2.59
323 324 0.103026 CCTGTGCGCTGCTATAGACA 59.897 55.000 9.73 0.07 0.00 3.41
324 325 1.471501 CCTGTGCGCTGCTATAGACAA 60.472 52.381 9.73 0.00 0.00 3.18
325 326 2.270923 CTGTGCGCTGCTATAGACAAA 58.729 47.619 9.73 0.00 0.00 2.83
326 327 2.270923 TGTGCGCTGCTATAGACAAAG 58.729 47.619 9.73 0.00 0.00 2.77
327 328 2.094234 TGTGCGCTGCTATAGACAAAGA 60.094 45.455 9.73 0.00 0.00 2.52
328 329 2.930040 GTGCGCTGCTATAGACAAAGAA 59.070 45.455 9.73 0.00 0.00 2.52
329 330 3.370978 GTGCGCTGCTATAGACAAAGAAA 59.629 43.478 9.73 0.00 0.00 2.52
330 331 3.618594 TGCGCTGCTATAGACAAAGAAAG 59.381 43.478 9.73 0.00 0.00 2.62
331 332 3.865745 GCGCTGCTATAGACAAAGAAAGA 59.134 43.478 3.21 0.00 0.00 2.52
332 333 4.260011 GCGCTGCTATAGACAAAGAAAGAC 60.260 45.833 3.21 0.00 0.00 3.01
333 334 4.864806 CGCTGCTATAGACAAAGAAAGACA 59.135 41.667 3.21 0.00 0.00 3.41
334 335 5.348724 CGCTGCTATAGACAAAGAAAGACAA 59.651 40.000 3.21 0.00 0.00 3.18
335 336 6.128553 CGCTGCTATAGACAAAGAAAGACAAA 60.129 38.462 3.21 0.00 0.00 2.83
336 337 7.571244 CGCTGCTATAGACAAAGAAAGACAAAA 60.571 37.037 3.21 0.00 0.00 2.44
337 338 8.239998 GCTGCTATAGACAAAGAAAGACAAAAT 58.760 33.333 3.21 0.00 0.00 1.82
345 346 9.366216 AGACAAAGAAAGACAAAATTACCAAAC 57.634 29.630 0.00 0.00 0.00 2.93
346 347 9.145865 GACAAAGAAAGACAAAATTACCAAACA 57.854 29.630 0.00 0.00 0.00 2.83
353 354 6.815089 AGACAAAATTACCAAACATTGCTCA 58.185 32.000 0.00 0.00 0.00 4.26
506 508 4.630894 AGTTTGCTCTCATCGTCTAGAG 57.369 45.455 0.00 0.00 41.82 2.43
511 513 3.129462 TGCTCTCATCGTCTAGAGTTTGG 59.871 47.826 0.00 0.00 41.13 3.28
568 573 0.620556 ACTGGTGTAAGGGCTGATGG 59.379 55.000 0.00 0.00 0.00 3.51
636 641 5.163622 CGATGTTGACAATTTGGCCTCTAAT 60.164 40.000 3.32 0.00 0.00 1.73
665 670 5.329191 TCTGATCCATCATTAATTGGCCT 57.671 39.130 3.32 0.00 36.02 5.19
672 677 4.452455 CCATCATTAATTGGCCTAGACGAC 59.548 45.833 3.32 0.00 0.00 4.34
724 729 3.549794 GATGTGGATTGGAAGCTAGCTT 58.450 45.455 29.71 29.71 39.23 3.74
725 730 3.439857 TGTGGATTGGAAGCTAGCTTT 57.560 42.857 29.84 15.08 36.26 3.51
833 851 7.012989 TGGTTTTGCTACTTCTTAGTTTCTTCC 59.987 37.037 0.00 0.00 35.78 3.46
876 894 4.072131 TCACCATTTGGCTTTGTACTCTC 58.928 43.478 0.00 0.00 39.32 3.20
881 899 0.984230 TGGCTTTGTACTCTCCCCTG 59.016 55.000 0.00 0.00 0.00 4.45
885 903 2.159028 GCTTTGTACTCTCCCCTGCTAG 60.159 54.545 0.00 0.00 0.00 3.42
899 917 4.713792 CCTGCTAGGGGTTTCTATCAAT 57.286 45.455 0.00 0.00 0.00 2.57
901 919 3.817647 CTGCTAGGGGTTTCTATCAATGC 59.182 47.826 0.00 0.00 0.00 3.56
926 944 5.697473 TTGACACGCTTTCATCCAATAAA 57.303 34.783 0.00 0.00 0.00 1.40
982 1000 6.301687 GGAAGTTTCCAAGAACTTACTGAC 57.698 41.667 6.03 0.00 46.73 3.51
985 1003 6.235231 AGTTTCCAAGAACTTACTGACTCA 57.765 37.500 0.00 0.00 36.49 3.41
1000 1018 9.684448 CTTACTGACTCACCACATAGTATTATG 57.316 37.037 3.83 3.83 41.99 1.90
1001 1019 6.516718 ACTGACTCACCACATAGTATTATGC 58.483 40.000 5.22 0.00 40.30 3.14
1002 1020 6.098266 ACTGACTCACCACATAGTATTATGCA 59.902 38.462 5.22 0.00 40.30 3.96
1003 1021 7.066307 TGACTCACCACATAGTATTATGCAT 57.934 36.000 3.79 3.79 40.30 3.96
1004 1022 8.189119 TGACTCACCACATAGTATTATGCATA 57.811 34.615 1.16 1.16 40.30 3.14
1005 1023 8.815912 TGACTCACCACATAGTATTATGCATAT 58.184 33.333 7.36 0.82 40.30 1.78
1011 1029 9.905713 ACCACATAGTATTATGCATATAAAGGG 57.094 33.333 7.36 3.91 40.30 3.95
1024 1042 7.390027 TGCATATAAAGGGAGAGAAGATAAGC 58.610 38.462 0.00 0.00 0.00 3.09
1067 1085 4.257267 TGGACACACAGATACAACAGAG 57.743 45.455 0.00 0.00 0.00 3.35
1090 1137 1.895020 TAACTCGAGGGCGGTGCAAT 61.895 55.000 18.41 0.00 38.28 3.56
1165 1212 1.151668 CTTCCTGTGTTTCTCCGCTG 58.848 55.000 0.00 0.00 0.00 5.18
1197 1244 1.405272 CCCGTATCCCACCCTGGTAC 61.405 65.000 0.00 0.00 35.17 3.34
1227 1274 2.698855 TCTGGCTGTCTTATCTTGGC 57.301 50.000 0.00 0.00 0.00 4.52
1272 1319 2.665185 GCCACGCTCTTCAACCGT 60.665 61.111 0.00 0.00 35.29 4.83
1300 1347 1.520192 CTGCAGTACCATACCGGCA 59.480 57.895 5.25 0.00 39.03 5.69
1335 1382 1.153208 GGCTCCTGTCCTGCTGATG 60.153 63.158 0.00 0.00 0.00 3.07
1383 1430 3.617263 CCGCCTACAACATAGAAGACAAC 59.383 47.826 0.00 0.00 0.00 3.32
1535 1582 5.072040 ACCTTTTCAAGTTTGACCAAGTG 57.928 39.130 10.10 6.30 36.83 3.16
1575 1622 8.739039 AGAAGCACAGCAAATATTTACAACATA 58.261 29.630 0.00 0.00 0.00 2.29
1614 1661 9.643693 AGCATGCAAATATATTTTATGGCTAAC 57.356 29.630 21.98 12.12 0.00 2.34
1663 1710 6.687081 ATGTTTTTCTACGGACTTTGTCAA 57.313 33.333 0.07 0.00 33.68 3.18
1664 1711 6.497785 TGTTTTTCTACGGACTTTGTCAAA 57.502 33.333 0.00 0.00 33.68 2.69
1665 1712 7.090953 TGTTTTTCTACGGACTTTGTCAAAT 57.909 32.000 0.00 0.00 33.68 2.32
1666 1713 7.540299 TGTTTTTCTACGGACTTTGTCAAATT 58.460 30.769 0.00 0.00 33.68 1.82
1667 1714 7.486551 TGTTTTTCTACGGACTTTGTCAAATTG 59.513 33.333 0.00 0.00 33.68 2.32
1668 1715 6.928979 TTTCTACGGACTTTGTCAAATTGA 57.071 33.333 0.00 0.00 33.68 2.57
1669 1716 6.928979 TTCTACGGACTTTGTCAAATTGAA 57.071 33.333 0.00 0.00 33.68 2.69
1670 1717 6.539649 TCTACGGACTTTGTCAAATTGAAG 57.460 37.500 0.00 0.00 33.68 3.02
1671 1718 4.568152 ACGGACTTTGTCAAATTGAAGG 57.432 40.909 0.00 0.00 33.68 3.46
1700 1747 2.940083 GCTTAGAACAAGGGGTGTAGGC 60.940 54.545 0.00 0.00 40.60 3.93
1721 1768 3.809905 CTGTAGCCACTATTTTCCCCTC 58.190 50.000 0.00 0.00 0.00 4.30
1740 1787 5.066593 CCCTCAGAACAAAGCTAGAACTTT 58.933 41.667 0.00 0.00 40.49 2.66
1760 1807 9.143631 GAACTTTGAAGTAATTTGGAATGGATG 57.856 33.333 0.00 0.00 38.57 3.51
1824 1871 6.910536 ATAGACGTGTCTCCAATTTGATTC 57.089 37.500 5.66 0.00 40.93 2.52
1934 1981 1.460273 TTGGCTTCAGCGTTTTCCCC 61.460 55.000 0.00 0.00 43.26 4.81
2077 2124 8.709386 AAAACAGCTAGAGACATATGTACAAG 57.291 34.615 8.71 5.58 0.00 3.16
2089 2136 0.605319 TGTACAAGAAGCAAGGGCCG 60.605 55.000 0.00 0.00 42.56 6.13
2117 2164 6.636454 TCTCCTAAGGCAAAAAGATCCTAA 57.364 37.500 0.00 0.00 0.00 2.69
2307 2354 5.778241 TCTGTACACCAGAGAACCTAAATCA 59.222 40.000 0.00 0.00 45.34 2.57
2342 2389 1.297745 TCGCCAACGACGTTTTTGC 60.298 52.632 11.24 12.79 45.12 3.68
2430 2477 9.486497 CATATAGAAGCACAAAGTCATACAGAT 57.514 33.333 0.00 0.00 0.00 2.90
2628 2675 2.413837 ACATGGTTAGTTCGTCAGCAC 58.586 47.619 0.00 0.00 0.00 4.40
2675 2722 6.882656 ACATAACAGATGCTCAGAGTTACAT 58.117 36.000 0.00 0.00 0.00 2.29
2707 2754 0.325933 TGTCAGAGGGCAATGGACAG 59.674 55.000 0.00 0.00 33.88 3.51
2713 2760 0.610232 AGGGCAATGGACAGTTGAGC 60.610 55.000 0.00 0.00 0.00 4.26
2816 2863 5.479306 GGATTTCTGCTTCTACTGTACACA 58.521 41.667 0.00 0.00 0.00 3.72
2820 2867 3.634910 TCTGCTTCTACTGTACACACACA 59.365 43.478 0.00 0.00 0.00 3.72
2849 2896 0.673333 CATGCTGAGCGTACCAACCA 60.673 55.000 0.00 0.00 0.00 3.67
2865 2912 3.117794 CAACCAATGCAGGCAAATATCG 58.882 45.455 0.00 0.00 0.00 2.92
2920 2967 2.634940 GAGATGCTATTCCCAGGCAGTA 59.365 50.000 0.00 0.00 39.38 2.74
2921 2968 3.254960 AGATGCTATTCCCAGGCAGTAT 58.745 45.455 0.00 0.00 39.38 2.12
2931 2978 3.459598 TCCCAGGCAGTATAAAGCATCTT 59.540 43.478 0.00 0.00 0.00 2.40
2943 2990 3.093278 CATCTTTGCCGAGTCGCC 58.907 61.111 7.12 0.00 0.00 5.54
2944 2991 1.448540 CATCTTTGCCGAGTCGCCT 60.449 57.895 7.12 0.00 0.00 5.52
2956 3003 0.898320 AGTCGCCTATGCACAACTCT 59.102 50.000 0.00 0.00 37.32 3.24
2957 3004 2.099263 GAGTCGCCTATGCACAACTCTA 59.901 50.000 0.00 0.00 37.32 2.43
2958 3005 2.159226 AGTCGCCTATGCACAACTCTAC 60.159 50.000 0.00 0.00 37.32 2.59
2986 3033 5.886609 TCTTAAAGGGTCATGTGATGGAAA 58.113 37.500 0.00 0.00 0.00 3.13
3064 3111 2.742053 TGTTTTGTTCGAGATGCTAGGC 59.258 45.455 0.00 0.00 0.00 3.93
3084 3131 5.509498 AGGCTGATTGCTAAAAGGTTGATA 58.491 37.500 0.00 0.00 42.39 2.15
3087 3134 5.730568 GCTGATTGCTAAAAGGTTGATACGG 60.731 44.000 0.00 0.00 38.95 4.02
3099 3146 0.541998 TGATACGGCTCGGGGATGAT 60.542 55.000 0.00 0.00 0.00 2.45
3158 3205 3.748083 AGATGCTCTGTTTTTCTGCTGA 58.252 40.909 0.00 0.00 0.00 4.26
3171 3218 3.785859 GCTGACAGATGCCGGGGA 61.786 66.667 6.65 0.00 0.00 4.81
3234 3281 1.614903 TCCAACATCTGGCTTTTGCTG 59.385 47.619 0.00 0.00 45.98 4.41
3266 3313 4.268687 GGAGACGTTCCAGCACAG 57.731 61.111 10.67 0.00 46.01 3.66
3286 3333 1.268079 GGCTTCAGAGGACACAAAAGC 59.732 52.381 0.00 0.00 38.65 3.51
3288 3335 3.403038 GCTTCAGAGGACACAAAAGCTA 58.597 45.455 0.00 0.00 36.92 3.32
3291 3338 2.069273 CAGAGGACACAAAAGCTACGG 58.931 52.381 0.00 0.00 0.00 4.02
3301 3348 2.875933 CAAAAGCTACGGTTGTCCAAGA 59.124 45.455 0.00 0.00 0.00 3.02
3307 3354 1.594331 ACGGTTGTCCAAGAAGAAGC 58.406 50.000 0.00 0.00 0.00 3.86
3313 3360 2.047274 CCAAGAAGAAGCCGCGGA 60.047 61.111 33.48 0.00 0.00 5.54
3338 3385 1.667154 CGTGGGAGCCGAGAAGATGA 61.667 60.000 0.00 0.00 0.00 2.92
3351 3398 0.250640 AAGATGATGCCGCTCCATCC 60.251 55.000 16.60 5.21 40.66 3.51
3353 3400 0.954449 GATGATGCCGCTCCATCCAG 60.954 60.000 11.91 0.00 40.66 3.86
3369 3416 2.783135 TCCAGTTCTCAAGGCATGAAC 58.217 47.619 0.00 0.00 37.67 3.18
3404 3451 1.584495 GAAATGTTGCCGGTCCACC 59.416 57.895 1.90 0.00 0.00 4.61
3443 3490 1.829849 CACCTCTCCTGATGAGCTCAA 59.170 52.381 22.50 3.88 41.18 3.02
3488 3535 1.842562 AGAGCAGGCACATCCTTATGT 59.157 47.619 0.00 0.00 44.75 2.29
3489 3536 2.158842 AGAGCAGGCACATCCTTATGTC 60.159 50.000 0.00 0.00 44.75 3.06
3490 3537 1.842562 AGCAGGCACATCCTTATGTCT 59.157 47.619 0.00 0.00 44.75 3.41
3491 3538 3.041211 AGCAGGCACATCCTTATGTCTA 58.959 45.455 0.00 0.00 44.75 2.59
3492 3539 3.649981 AGCAGGCACATCCTTATGTCTAT 59.350 43.478 0.00 0.00 44.75 1.98
3497 3544 7.579531 GCAGGCACATCCTTATGTCTATGTATA 60.580 40.741 0.00 0.00 44.75 1.47
3551 3598 0.390492 TGAGTGTCACTGCTGTCCTG 59.610 55.000 11.04 0.00 0.00 3.86
3596 3679 8.547894 TGTCGTTTGTTATCTATGCAATATGTC 58.452 33.333 0.00 0.00 0.00 3.06
3612 3695 6.735694 GCAATATGTCTTGAACACACCAAAGT 60.736 38.462 0.00 0.00 41.75 2.66
3637 3720 5.946972 TGGTTCCAAGTTTTAGTTTCACAGA 59.053 36.000 0.00 0.00 0.00 3.41
3662 3745 5.234329 TCAAGAGAAAGTGTGTGTCGATTTC 59.766 40.000 0.00 0.00 0.00 2.17
3688 3775 7.219484 AGTAAATGATTATTGGCATAGGCAC 57.781 36.000 0.15 0.00 43.71 5.01
3710 3797 7.338449 GGCACTGTCCAGTTCCTAAATAAATAA 59.662 37.037 8.61 0.00 40.81 1.40
3730 3817 2.403252 ATACAGAGGAGCCCGTTTTG 57.597 50.000 0.00 0.00 0.00 2.44
3752 3839 6.968131 TGTGTTGTACATTTAGAGCTCATC 57.032 37.500 17.77 0.00 33.42 2.92
3785 3872 4.332819 CCATGAAACTAGGCCGTTCTAAAG 59.667 45.833 0.00 0.00 0.00 1.85
3787 3874 3.325716 TGAAACTAGGCCGTTCTAAAGGT 59.674 43.478 0.00 0.00 0.00 3.50
3788 3875 3.329929 AACTAGGCCGTTCTAAAGGTG 57.670 47.619 0.00 0.00 0.00 4.00
3789 3876 2.532843 ACTAGGCCGTTCTAAAGGTGA 58.467 47.619 0.00 0.00 0.00 4.02
3790 3877 3.105283 ACTAGGCCGTTCTAAAGGTGAT 58.895 45.455 0.00 0.00 0.00 3.06
3792 3879 4.713321 ACTAGGCCGTTCTAAAGGTGATTA 59.287 41.667 0.00 0.00 0.00 1.75
3818 3905 2.574006 TCTGCAGCATCTTTCCTTGT 57.426 45.000 9.47 0.00 0.00 3.16
3822 3909 2.294233 TGCAGCATCTTTCCTTGTTCAC 59.706 45.455 0.00 0.00 0.00 3.18
3824 3911 3.611057 GCAGCATCTTTCCTTGTTCACAG 60.611 47.826 0.00 0.00 0.00 3.66
3836 3923 3.685139 TGTTCACAGAAGATGGTCTCC 57.315 47.619 0.00 0.00 0.00 3.71
3850 3939 3.031736 TGGTCTCCTTAGCATACAGGTC 58.968 50.000 0.00 0.00 0.00 3.85
3974 4065 2.499214 GAGGATGACTCTGCTCGGT 58.501 57.895 0.00 0.00 43.14 4.69
3998 4089 1.066908 CTCGCACTCTCTCTGAATCCC 59.933 57.143 0.00 0.00 0.00 3.85
4010 4101 4.009675 CTCTGAATCCCCAATTTCAACGA 58.990 43.478 0.00 0.00 0.00 3.85
4021 4112 3.914426 ATTTCAACGATACCTCCTGCT 57.086 42.857 0.00 0.00 0.00 4.24
4036 4127 2.172483 CTGCTGGGCTAGTGGACGTT 62.172 60.000 0.00 0.00 0.00 3.99
4042 4133 2.261671 CTAGTGGACGTTGGCGCT 59.738 61.111 7.64 0.00 42.83 5.92
4049 4140 4.609018 ACGTTGGCGCTGCTGAGT 62.609 61.111 7.64 0.00 42.83 3.41
4074 4165 2.497273 GCGGTCCTAAACCTTACCTACA 59.503 50.000 0.00 0.00 46.87 2.74
4077 4168 5.737349 GCGGTCCTAAACCTTACCTACATAC 60.737 48.000 0.00 0.00 46.87 2.39
4158 4252 1.641577 GCTCCACGCTCGAATTAACT 58.358 50.000 0.00 0.00 35.14 2.24
4196 4290 9.801873 AGCATATAATAATCAAACAACCACAAC 57.198 29.630 0.00 0.00 0.00 3.32
4240 4334 7.099764 AGATAGAACAACAACGACATGATCTT 58.900 34.615 0.00 0.00 0.00 2.40
4249 4343 2.884012 ACGACATGATCTTGGTTTTGCA 59.116 40.909 12.76 0.00 0.00 4.08
4257 4352 5.916318 TGATCTTGGTTTTGCATTTTCAGT 58.084 33.333 0.00 0.00 0.00 3.41
4348 4449 1.606668 GACGGAAAGCACATCACCAAA 59.393 47.619 0.00 0.00 0.00 3.28
4357 4458 3.642848 AGCACATCACCAAACCTTCAATT 59.357 39.130 0.00 0.00 0.00 2.32
4416 4517 1.686052 AGAGAATCGTCCATGAGGAGC 59.314 52.381 0.00 0.00 46.92 4.70
4441 4542 1.542030 CCTAGCACTCGTCAAGTCTGT 59.458 52.381 0.00 0.00 35.45 3.41
4478 4579 3.115910 ATCGTGTCGCGCATCGGTA 62.116 57.895 8.75 0.00 41.07 4.02
4546 4647 5.500234 ACATAATAGCTTGACTTGCTTGGA 58.500 37.500 0.00 0.00 41.46 3.53
4554 4655 4.397417 GCTTGACTTGCTTGGATACTCATT 59.603 41.667 0.00 0.00 37.61 2.57
4565 4666 5.715439 TGGATACTCATTCCATCCAGTTT 57.285 39.130 0.00 0.00 42.55 2.66
4576 4677 2.158667 CCATCCAGTTTATAAGGCCCGT 60.159 50.000 0.00 0.00 0.00 5.28
4596 4716 9.609346 GGCCCGTACATATTTTAAGATATACAT 57.391 33.333 0.00 0.00 0.00 2.29
4683 4803 4.684242 GGGTTTAGTTTTGCAGTGCATTAC 59.316 41.667 20.50 18.80 38.76 1.89
4686 4806 6.438763 GTTTAGTTTTGCAGTGCATTACTCT 58.561 36.000 26.58 18.78 38.76 3.24
4688 4808 5.520376 AGTTTTGCAGTGCATTACTCTTT 57.480 34.783 20.50 1.56 38.76 2.52
4689 4809 5.523369 AGTTTTGCAGTGCATTACTCTTTC 58.477 37.500 20.50 2.78 38.76 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.521958 CTTACAGGTGGGACCAGGCG 62.522 65.000 0.00 0.00 41.95 5.52
24 25 1.299976 CTTACAGGTGGGACCAGGC 59.700 63.158 0.00 0.00 41.95 4.85
25 26 1.562672 CCCTTACAGGTGGGACCAGG 61.563 65.000 0.00 0.00 46.15 4.45
26 27 1.991230 CCCTTACAGGTGGGACCAG 59.009 63.158 0.00 0.00 46.15 4.00
27 28 2.228480 GCCCTTACAGGTGGGACCA 61.228 63.158 1.75 0.00 46.15 4.02
28 29 2.675371 GCCCTTACAGGTGGGACC 59.325 66.667 1.75 0.00 46.15 4.46
29 30 2.675371 GGCCCTTACAGGTGGGAC 59.325 66.667 1.75 0.00 46.15 4.46
30 31 3.006728 CGGCCCTTACAGGTGGGA 61.007 66.667 0.00 0.00 46.15 4.37
31 32 3.006728 TCGGCCCTTACAGGTGGG 61.007 66.667 0.00 0.00 46.00 4.61
32 33 2.240162 GACTCGGCCCTTACAGGTGG 62.240 65.000 0.00 0.00 31.93 4.61
33 34 1.218316 GACTCGGCCCTTACAGGTG 59.782 63.158 0.00 0.00 31.93 4.00
34 35 0.834687 TTGACTCGGCCCTTACAGGT 60.835 55.000 0.00 0.00 31.93 4.00
35 36 0.323629 TTTGACTCGGCCCTTACAGG 59.676 55.000 0.00 0.00 34.30 4.00
36 37 2.076863 CTTTTGACTCGGCCCTTACAG 58.923 52.381 0.00 0.00 0.00 2.74
37 38 1.271163 CCTTTTGACTCGGCCCTTACA 60.271 52.381 0.00 0.00 0.00 2.41
38 39 1.271217 ACCTTTTGACTCGGCCCTTAC 60.271 52.381 0.00 0.00 0.00 2.34
39 40 1.061546 ACCTTTTGACTCGGCCCTTA 58.938 50.000 0.00 0.00 0.00 2.69
40 41 0.185175 AACCTTTTGACTCGGCCCTT 59.815 50.000 0.00 0.00 0.00 3.95
41 42 0.537371 CAACCTTTTGACTCGGCCCT 60.537 55.000 0.00 0.00 34.24 5.19
42 43 0.536460 TCAACCTTTTGACTCGGCCC 60.536 55.000 0.00 0.00 36.79 5.80
43 44 3.015516 TCAACCTTTTGACTCGGCC 57.984 52.632 0.00 0.00 36.79 6.13
50 51 1.487142 TCCGTCAGGTCAACCTTTTGA 59.513 47.619 0.00 0.00 46.09 2.69
51 52 1.873591 CTCCGTCAGGTCAACCTTTTG 59.126 52.381 0.00 0.00 46.09 2.44
52 53 1.766496 TCTCCGTCAGGTCAACCTTTT 59.234 47.619 0.00 0.00 46.09 2.27
53 54 1.070289 GTCTCCGTCAGGTCAACCTTT 59.930 52.381 0.00 0.00 46.09 3.11
54 55 0.680061 GTCTCCGTCAGGTCAACCTT 59.320 55.000 0.00 0.00 46.09 3.50
56 57 1.080705 CGTCTCCGTCAGGTCAACC 60.081 63.158 0.00 0.00 39.05 3.77
57 58 1.080705 CCGTCTCCGTCAGGTCAAC 60.081 63.158 0.00 0.00 39.05 3.18
58 59 2.927580 GCCGTCTCCGTCAGGTCAA 61.928 63.158 0.00 0.00 39.05 3.18
59 60 3.371063 GCCGTCTCCGTCAGGTCA 61.371 66.667 0.00 0.00 39.05 4.02
60 61 3.063084 AGCCGTCTCCGTCAGGTC 61.063 66.667 0.00 0.00 39.05 3.85
61 62 3.374402 CAGCCGTCTCCGTCAGGT 61.374 66.667 0.00 0.00 39.05 4.00
62 63 3.057547 CTCAGCCGTCTCCGTCAGG 62.058 68.421 0.00 0.00 39.46 3.86
63 64 1.867919 AACTCAGCCGTCTCCGTCAG 61.868 60.000 0.00 0.00 0.00 3.51
64 65 1.863662 GAACTCAGCCGTCTCCGTCA 61.864 60.000 0.00 0.00 0.00 4.35
65 66 1.153997 GAACTCAGCCGTCTCCGTC 60.154 63.158 0.00 0.00 0.00 4.79
66 67 1.901948 TGAACTCAGCCGTCTCCGT 60.902 57.895 0.00 0.00 0.00 4.69
67 68 1.444553 GTGAACTCAGCCGTCTCCG 60.445 63.158 0.00 0.00 0.00 4.63
68 69 0.389166 CTGTGAACTCAGCCGTCTCC 60.389 60.000 0.00 0.00 0.00 3.71
69 70 0.598562 TCTGTGAACTCAGCCGTCTC 59.401 55.000 0.00 0.00 35.63 3.36
70 71 1.040646 TTCTGTGAACTCAGCCGTCT 58.959 50.000 0.00 0.00 35.63 4.18
71 72 1.140816 GTTCTGTGAACTCAGCCGTC 58.859 55.000 3.49 0.00 35.63 4.79
72 73 0.597637 CGTTCTGTGAACTCAGCCGT 60.598 55.000 8.51 0.00 35.63 5.68
73 74 0.318699 TCGTTCTGTGAACTCAGCCG 60.319 55.000 8.51 0.00 35.63 5.52
74 75 1.269831 ACTCGTTCTGTGAACTCAGCC 60.270 52.381 8.51 0.00 35.63 4.85
75 76 2.055100 GACTCGTTCTGTGAACTCAGC 58.945 52.381 8.51 0.00 35.63 4.26
76 77 2.311462 CGACTCGTTCTGTGAACTCAG 58.689 52.381 8.51 6.75 36.85 3.35
77 78 1.001706 CCGACTCGTTCTGTGAACTCA 60.002 52.381 8.51 0.00 0.00 3.41
78 79 1.001597 ACCGACTCGTTCTGTGAACTC 60.002 52.381 8.51 0.08 0.00 3.01
79 80 1.030457 ACCGACTCGTTCTGTGAACT 58.970 50.000 8.51 0.00 0.00 3.01
80 81 1.129326 CACCGACTCGTTCTGTGAAC 58.871 55.000 0.00 0.77 40.89 3.18
81 82 0.596600 GCACCGACTCGTTCTGTGAA 60.597 55.000 12.87 0.00 40.89 3.18
82 83 1.007734 GCACCGACTCGTTCTGTGA 60.008 57.895 12.87 0.00 40.89 3.58
83 84 2.365068 CGCACCGACTCGTTCTGTG 61.365 63.158 0.00 6.88 41.24 3.66
84 85 2.050351 CGCACCGACTCGTTCTGT 60.050 61.111 0.00 0.00 0.00 3.41
85 86 3.470567 GCGCACCGACTCGTTCTG 61.471 66.667 0.30 0.00 0.00 3.02
86 87 3.612371 GAGCGCACCGACTCGTTCT 62.612 63.158 11.47 0.00 34.01 3.01
87 88 3.173240 GAGCGCACCGACTCGTTC 61.173 66.667 11.47 0.00 0.00 3.95
93 94 3.736482 CTAGTCCGAGCGCACCGAC 62.736 68.421 21.01 18.47 0.00 4.79
94 95 3.506096 CTAGTCCGAGCGCACCGA 61.506 66.667 21.01 7.73 0.00 4.69
95 96 4.554363 CCTAGTCCGAGCGCACCG 62.554 72.222 11.47 13.05 0.00 4.94
96 97 4.208686 CCCTAGTCCGAGCGCACC 62.209 72.222 11.47 0.00 0.00 5.01
97 98 4.208686 CCCCTAGTCCGAGCGCAC 62.209 72.222 11.47 0.96 0.00 5.34
100 101 2.515996 TTTTGCCCCTAGTCCGAGCG 62.516 60.000 0.00 0.00 0.00 5.03
101 102 1.025113 GTTTTGCCCCTAGTCCGAGC 61.025 60.000 0.00 0.00 0.00 5.03
102 103 0.613777 AGTTTTGCCCCTAGTCCGAG 59.386 55.000 0.00 0.00 0.00 4.63
103 104 0.323629 CAGTTTTGCCCCTAGTCCGA 59.676 55.000 0.00 0.00 0.00 4.55
104 105 0.323629 TCAGTTTTGCCCCTAGTCCG 59.676 55.000 0.00 0.00 0.00 4.79
105 106 1.950954 GCTCAGTTTTGCCCCTAGTCC 60.951 57.143 0.00 0.00 0.00 3.85
106 107 1.271379 TGCTCAGTTTTGCCCCTAGTC 60.271 52.381 0.00 0.00 0.00 2.59
107 108 0.771127 TGCTCAGTTTTGCCCCTAGT 59.229 50.000 0.00 0.00 0.00 2.57
108 109 1.168714 GTGCTCAGTTTTGCCCCTAG 58.831 55.000 0.00 0.00 0.00 3.02
109 110 0.476338 TGTGCTCAGTTTTGCCCCTA 59.524 50.000 0.00 0.00 0.00 3.53
110 111 0.396974 TTGTGCTCAGTTTTGCCCCT 60.397 50.000 0.00 0.00 0.00 4.79
111 112 0.681175 ATTGTGCTCAGTTTTGCCCC 59.319 50.000 0.00 0.00 0.00 5.80
112 113 2.224018 TGAATTGTGCTCAGTTTTGCCC 60.224 45.455 0.00 0.00 0.00 5.36
113 114 2.796593 GTGAATTGTGCTCAGTTTTGCC 59.203 45.455 0.00 0.00 0.00 4.52
114 115 3.446799 TGTGAATTGTGCTCAGTTTTGC 58.553 40.909 0.00 0.00 0.00 3.68
115 116 5.401376 CAGATGTGAATTGTGCTCAGTTTTG 59.599 40.000 0.00 0.00 0.00 2.44
116 117 5.300034 TCAGATGTGAATTGTGCTCAGTTTT 59.700 36.000 0.00 0.00 0.00 2.43
117 118 4.823442 TCAGATGTGAATTGTGCTCAGTTT 59.177 37.500 0.00 0.00 0.00 2.66
118 119 4.392047 TCAGATGTGAATTGTGCTCAGTT 58.608 39.130 0.00 0.00 0.00 3.16
119 120 4.001652 CTCAGATGTGAATTGTGCTCAGT 58.998 43.478 0.00 0.00 30.14 3.41
120 121 3.374367 CCTCAGATGTGAATTGTGCTCAG 59.626 47.826 0.00 0.00 30.14 3.35
121 122 3.340928 CCTCAGATGTGAATTGTGCTCA 58.659 45.455 0.00 0.00 30.14 4.26
122 123 2.681848 CCCTCAGATGTGAATTGTGCTC 59.318 50.000 0.00 0.00 30.14 4.26
123 124 2.719739 CCCTCAGATGTGAATTGTGCT 58.280 47.619 0.00 0.00 30.14 4.40
124 125 1.133790 GCCCTCAGATGTGAATTGTGC 59.866 52.381 0.00 0.00 30.14 4.57
125 126 2.439409 TGCCCTCAGATGTGAATTGTG 58.561 47.619 0.00 0.00 30.14 3.33
126 127 2.885135 TGCCCTCAGATGTGAATTGT 57.115 45.000 0.00 0.00 30.14 2.71
127 128 4.240096 GTTTTGCCCTCAGATGTGAATTG 58.760 43.478 0.00 0.00 30.14 2.32
128 129 3.259123 GGTTTTGCCCTCAGATGTGAATT 59.741 43.478 0.00 0.00 30.14 2.17
129 130 2.827921 GGTTTTGCCCTCAGATGTGAAT 59.172 45.455 0.00 0.00 30.14 2.57
130 131 2.238521 GGTTTTGCCCTCAGATGTGAA 58.761 47.619 0.00 0.00 30.14 3.18
131 132 1.881925 CGGTTTTGCCCTCAGATGTGA 60.882 52.381 0.00 0.00 0.00 3.58
132 133 0.523072 CGGTTTTGCCCTCAGATGTG 59.477 55.000 0.00 0.00 0.00 3.21
133 134 0.400213 TCGGTTTTGCCCTCAGATGT 59.600 50.000 0.00 0.00 0.00 3.06
134 135 1.089920 CTCGGTTTTGCCCTCAGATG 58.910 55.000 0.00 0.00 0.00 2.90
135 136 0.678048 GCTCGGTTTTGCCCTCAGAT 60.678 55.000 0.00 0.00 0.00 2.90
136 137 1.302511 GCTCGGTTTTGCCCTCAGA 60.303 57.895 0.00 0.00 0.00 3.27
137 138 1.600636 TGCTCGGTTTTGCCCTCAG 60.601 57.895 0.00 0.00 0.00 3.35
138 139 1.896660 GTGCTCGGTTTTGCCCTCA 60.897 57.895 0.00 0.00 0.00 3.86
139 140 1.244019 ATGTGCTCGGTTTTGCCCTC 61.244 55.000 0.00 0.00 0.00 4.30
140 141 1.228552 ATGTGCTCGGTTTTGCCCT 60.229 52.632 0.00 0.00 0.00 5.19
141 142 1.080569 CATGTGCTCGGTTTTGCCC 60.081 57.895 0.00 0.00 0.00 5.36
142 143 1.080569 CCATGTGCTCGGTTTTGCC 60.081 57.895 0.00 0.00 0.00 4.52
143 144 0.387239 GTCCATGTGCTCGGTTTTGC 60.387 55.000 0.00 0.00 0.00 3.68
144 145 0.950836 TGTCCATGTGCTCGGTTTTG 59.049 50.000 0.00 0.00 0.00 2.44
145 146 0.951558 GTGTCCATGTGCTCGGTTTT 59.048 50.000 0.00 0.00 0.00 2.43
146 147 0.889186 GGTGTCCATGTGCTCGGTTT 60.889 55.000 0.00 0.00 0.00 3.27
147 148 1.302511 GGTGTCCATGTGCTCGGTT 60.303 57.895 0.00 0.00 0.00 4.44
148 149 2.347490 GGTGTCCATGTGCTCGGT 59.653 61.111 0.00 0.00 0.00 4.69
149 150 2.034879 GTGGTGTCCATGTGCTCGG 61.035 63.158 0.00 0.00 35.28 4.63
150 151 1.004560 AGTGGTGTCCATGTGCTCG 60.005 57.895 0.00 0.00 35.28 5.03
151 152 0.035317 TCAGTGGTGTCCATGTGCTC 59.965 55.000 0.00 0.00 35.28 4.26
152 153 0.035881 CTCAGTGGTGTCCATGTGCT 59.964 55.000 0.00 0.00 35.28 4.40
153 154 0.957395 CCTCAGTGGTGTCCATGTGC 60.957 60.000 0.00 0.00 35.28 4.57
154 155 0.321919 CCCTCAGTGGTGTCCATGTG 60.322 60.000 0.00 0.00 35.28 3.21
155 156 2.069776 CCCTCAGTGGTGTCCATGT 58.930 57.895 0.00 0.00 35.28 3.21
156 157 1.377725 GCCCTCAGTGGTGTCCATG 60.378 63.158 0.00 0.00 35.28 3.66
157 158 1.426251 TTGCCCTCAGTGGTGTCCAT 61.426 55.000 0.00 0.00 35.28 3.41
158 159 1.640593 TTTGCCCTCAGTGGTGTCCA 61.641 55.000 0.00 0.00 0.00 4.02
159 160 0.467290 TTTTGCCCTCAGTGGTGTCC 60.467 55.000 0.00 0.00 0.00 4.02
160 161 0.954452 CTTTTGCCCTCAGTGGTGTC 59.046 55.000 0.00 0.00 0.00 3.67
161 162 0.468029 CCTTTTGCCCTCAGTGGTGT 60.468 55.000 0.00 0.00 0.00 4.16
162 163 0.178992 TCCTTTTGCCCTCAGTGGTG 60.179 55.000 0.00 0.00 0.00 4.17
163 164 0.779997 ATCCTTTTGCCCTCAGTGGT 59.220 50.000 0.00 0.00 0.00 4.16
164 165 2.806945 TATCCTTTTGCCCTCAGTGG 57.193 50.000 0.00 0.00 0.00 4.00
165 166 6.405842 GGTTAATTATCCTTTTGCCCTCAGTG 60.406 42.308 5.46 0.00 0.00 3.66
166 167 5.656859 GGTTAATTATCCTTTTGCCCTCAGT 59.343 40.000 5.46 0.00 0.00 3.41
167 168 5.069119 GGGTTAATTATCCTTTTGCCCTCAG 59.931 44.000 11.51 0.00 0.00 3.35
168 169 4.959839 GGGTTAATTATCCTTTTGCCCTCA 59.040 41.667 11.51 0.00 0.00 3.86
169 170 5.208890 AGGGTTAATTATCCTTTTGCCCTC 58.791 41.667 11.51 0.00 39.57 4.30
170 171 5.220872 AGGGTTAATTATCCTTTTGCCCT 57.779 39.130 11.51 0.00 38.99 5.19
171 172 7.426606 TTTAGGGTTAATTATCCTTTTGCCC 57.573 36.000 11.51 0.00 32.46 5.36
178 179 8.336987 GCCTCCATATTTAGGGTTAATTATCCT 58.663 37.037 11.51 11.36 33.17 3.24
179 180 8.336987 AGCCTCCATATTTAGGGTTAATTATCC 58.663 37.037 4.22 4.22 40.68 2.59
180 181 9.178758 CAGCCTCCATATTTAGGGTTAATTATC 57.821 37.037 2.65 0.00 41.60 1.75
181 182 7.615757 GCAGCCTCCATATTTAGGGTTAATTAT 59.384 37.037 2.65 0.00 41.60 1.28
182 183 6.946009 GCAGCCTCCATATTTAGGGTTAATTA 59.054 38.462 2.65 0.00 41.60 1.40
183 184 5.775195 GCAGCCTCCATATTTAGGGTTAATT 59.225 40.000 2.65 0.00 41.60 1.40
184 185 5.162991 TGCAGCCTCCATATTTAGGGTTAAT 60.163 40.000 2.65 0.00 41.60 1.40
185 186 4.167113 TGCAGCCTCCATATTTAGGGTTAA 59.833 41.667 2.65 0.00 41.60 2.01
186 187 3.719479 TGCAGCCTCCATATTTAGGGTTA 59.281 43.478 2.65 0.00 41.60 2.85
187 188 2.513738 TGCAGCCTCCATATTTAGGGTT 59.486 45.455 2.65 0.00 41.60 4.11
188 189 2.135189 TGCAGCCTCCATATTTAGGGT 58.865 47.619 0.00 0.00 44.30 4.34
189 190 2.887152 GTTGCAGCCTCCATATTTAGGG 59.113 50.000 0.00 0.00 33.17 3.53
190 191 3.567164 CAGTTGCAGCCTCCATATTTAGG 59.433 47.826 0.00 0.00 35.86 2.69
191 192 4.202441 ACAGTTGCAGCCTCCATATTTAG 58.798 43.478 0.00 0.00 0.00 1.85
192 193 4.235079 ACAGTTGCAGCCTCCATATTTA 57.765 40.909 0.00 0.00 0.00 1.40
193 194 3.091633 ACAGTTGCAGCCTCCATATTT 57.908 42.857 0.00 0.00 0.00 1.40
194 195 2.814805 ACAGTTGCAGCCTCCATATT 57.185 45.000 0.00 0.00 0.00 1.28
195 196 3.041211 TCTACAGTTGCAGCCTCCATAT 58.959 45.455 0.00 0.00 0.00 1.78
196 197 2.466846 TCTACAGTTGCAGCCTCCATA 58.533 47.619 0.00 0.00 0.00 2.74
197 198 1.279496 TCTACAGTTGCAGCCTCCAT 58.721 50.000 0.00 0.00 0.00 3.41
198 199 1.055849 TTCTACAGTTGCAGCCTCCA 58.944 50.000 0.00 0.00 0.00 3.86
199 200 2.185004 TTTCTACAGTTGCAGCCTCC 57.815 50.000 0.00 0.00 0.00 4.30
200 201 5.586243 TCATATTTTCTACAGTTGCAGCCTC 59.414 40.000 0.00 0.00 0.00 4.70
201 202 5.500234 TCATATTTTCTACAGTTGCAGCCT 58.500 37.500 0.00 0.00 0.00 4.58
202 203 5.818136 TCATATTTTCTACAGTTGCAGCC 57.182 39.130 0.00 0.00 0.00 4.85
203 204 9.226345 GTATTTCATATTTTCTACAGTTGCAGC 57.774 33.333 0.00 0.00 0.00 5.25
204 205 9.722056 GGTATTTCATATTTTCTACAGTTGCAG 57.278 33.333 0.00 0.00 0.00 4.41
205 206 9.237187 TGGTATTTCATATTTTCTACAGTTGCA 57.763 29.630 0.00 0.00 0.00 4.08
209 210 9.354673 CCCATGGTATTTCATATTTTCTACAGT 57.645 33.333 11.73 0.00 0.00 3.55
210 211 8.796475 CCCCATGGTATTTCATATTTTCTACAG 58.204 37.037 11.73 0.00 0.00 2.74
211 212 8.285891 ACCCCATGGTATTTCATATTTTCTACA 58.714 33.333 11.73 0.00 45.45 2.74
212 213 8.706322 ACCCCATGGTATTTCATATTTTCTAC 57.294 34.615 11.73 0.00 45.45 2.59
229 230 4.646492 CCTAGAAGATTTTTGACCCCATGG 59.354 45.833 4.14 4.14 37.80 3.66
230 231 5.264395 ACCTAGAAGATTTTTGACCCCATG 58.736 41.667 0.00 0.00 0.00 3.66
231 232 5.536497 ACCTAGAAGATTTTTGACCCCAT 57.464 39.130 0.00 0.00 0.00 4.00
232 233 6.457159 TTACCTAGAAGATTTTTGACCCCA 57.543 37.500 0.00 0.00 0.00 4.96
233 234 7.347252 AGATTACCTAGAAGATTTTTGACCCC 58.653 38.462 0.00 0.00 0.00 4.95
234 235 9.901172 TTAGATTACCTAGAAGATTTTTGACCC 57.099 33.333 0.00 0.00 0.00 4.46
244 245 9.869667 AGCAACTCTATTAGATTACCTAGAAGA 57.130 33.333 0.00 0.00 0.00 2.87
246 247 9.869667 AGAGCAACTCTATTAGATTACCTAGAA 57.130 33.333 0.00 0.00 39.28 2.10
247 248 9.869667 AAGAGCAACTCTATTAGATTACCTAGA 57.130 33.333 0.00 0.00 40.28 2.43
248 249 9.906660 CAAGAGCAACTCTATTAGATTACCTAG 57.093 37.037 0.00 0.00 40.28 3.02
249 250 9.422681 ACAAGAGCAACTCTATTAGATTACCTA 57.577 33.333 0.00 0.00 40.28 3.08
250 251 8.312669 ACAAGAGCAACTCTATTAGATTACCT 57.687 34.615 0.00 0.00 40.28 3.08
251 252 8.417884 AGACAAGAGCAACTCTATTAGATTACC 58.582 37.037 0.00 0.00 40.28 2.85
260 261 9.944376 TGTTAAAATAGACAAGAGCAACTCTAT 57.056 29.630 0.00 0.00 40.28 1.98
261 262 9.944376 ATGTTAAAATAGACAAGAGCAACTCTA 57.056 29.630 0.00 0.00 40.28 2.43
262 263 8.854614 ATGTTAAAATAGACAAGAGCAACTCT 57.145 30.769 0.00 0.00 43.37 3.24
263 264 8.721478 TGATGTTAAAATAGACAAGAGCAACTC 58.279 33.333 0.00 0.00 0.00 3.01
264 265 8.621532 TGATGTTAAAATAGACAAGAGCAACT 57.378 30.769 0.00 0.00 0.00 3.16
265 266 9.118236 GTTGATGTTAAAATAGACAAGAGCAAC 57.882 33.333 0.00 0.00 0.00 4.17
266 267 9.066892 AGTTGATGTTAAAATAGACAAGAGCAA 57.933 29.630 0.00 0.00 0.00 3.91
267 268 8.621532 AGTTGATGTTAAAATAGACAAGAGCA 57.378 30.769 0.00 0.00 0.00 4.26
283 284 9.383519 CACAGGTATTTAGTGATAGTTGATGTT 57.616 33.333 0.00 0.00 35.33 2.71
284 285 7.495934 GCACAGGTATTTAGTGATAGTTGATGT 59.504 37.037 0.00 0.00 35.33 3.06
285 286 7.306807 CGCACAGGTATTTAGTGATAGTTGATG 60.307 40.741 0.00 0.00 35.33 3.07
286 287 6.701841 CGCACAGGTATTTAGTGATAGTTGAT 59.298 38.462 0.00 0.00 35.33 2.57
287 288 6.040247 CGCACAGGTATTTAGTGATAGTTGA 58.960 40.000 0.00 0.00 35.33 3.18
288 289 5.276868 GCGCACAGGTATTTAGTGATAGTTG 60.277 44.000 0.30 0.00 35.33 3.16
289 290 4.809426 GCGCACAGGTATTTAGTGATAGTT 59.191 41.667 0.30 0.00 35.33 2.24
290 291 4.099573 AGCGCACAGGTATTTAGTGATAGT 59.900 41.667 11.47 0.00 35.33 2.12
291 292 4.445718 CAGCGCACAGGTATTTAGTGATAG 59.554 45.833 11.47 0.00 35.33 2.08
292 293 4.368315 CAGCGCACAGGTATTTAGTGATA 58.632 43.478 11.47 0.00 35.33 2.15
293 294 3.198068 CAGCGCACAGGTATTTAGTGAT 58.802 45.455 11.47 0.00 35.33 3.06
294 295 2.616960 CAGCGCACAGGTATTTAGTGA 58.383 47.619 11.47 0.00 35.33 3.41
295 296 1.062587 GCAGCGCACAGGTATTTAGTG 59.937 52.381 11.47 0.00 36.39 2.74
296 297 1.066143 AGCAGCGCACAGGTATTTAGT 60.066 47.619 11.47 0.00 0.00 2.24
297 298 1.656652 AGCAGCGCACAGGTATTTAG 58.343 50.000 11.47 0.00 0.00 1.85
298 299 2.971660 TAGCAGCGCACAGGTATTTA 57.028 45.000 11.47 0.00 0.00 1.40
299 300 2.332063 ATAGCAGCGCACAGGTATTT 57.668 45.000 11.47 0.00 0.00 1.40
300 301 2.628178 TCTATAGCAGCGCACAGGTATT 59.372 45.455 19.27 8.34 29.93 1.89
301 302 2.029828 GTCTATAGCAGCGCACAGGTAT 60.030 50.000 11.47 16.18 31.78 2.73
302 303 1.337071 GTCTATAGCAGCGCACAGGTA 59.663 52.381 11.47 9.60 0.00 3.08
303 304 0.103208 GTCTATAGCAGCGCACAGGT 59.897 55.000 11.47 7.36 0.00 4.00
304 305 0.103026 TGTCTATAGCAGCGCACAGG 59.897 55.000 11.47 0.00 0.00 4.00
305 306 1.926561 TTGTCTATAGCAGCGCACAG 58.073 50.000 11.47 0.00 0.00 3.66
306 307 2.094234 TCTTTGTCTATAGCAGCGCACA 60.094 45.455 11.47 0.00 0.00 4.57
307 308 2.540515 TCTTTGTCTATAGCAGCGCAC 58.459 47.619 11.47 0.00 0.00 5.34
308 309 2.959507 TCTTTGTCTATAGCAGCGCA 57.040 45.000 11.47 0.00 0.00 6.09
309 310 3.865745 TCTTTCTTTGTCTATAGCAGCGC 59.134 43.478 0.00 0.00 0.00 5.92
310 311 4.864806 TGTCTTTCTTTGTCTATAGCAGCG 59.135 41.667 0.00 0.00 0.00 5.18
311 312 6.727824 TTGTCTTTCTTTGTCTATAGCAGC 57.272 37.500 0.00 0.00 0.00 5.25
319 320 9.366216 GTTTGGTAATTTTGTCTTTCTTTGTCT 57.634 29.630 0.00 0.00 0.00 3.41
320 321 9.145865 TGTTTGGTAATTTTGTCTTTCTTTGTC 57.854 29.630 0.00 0.00 0.00 3.18
321 322 9.665719 ATGTTTGGTAATTTTGTCTTTCTTTGT 57.334 25.926 0.00 0.00 0.00 2.83
324 325 8.611757 GCAATGTTTGGTAATTTTGTCTTTCTT 58.388 29.630 0.00 0.00 0.00 2.52
325 326 7.986889 AGCAATGTTTGGTAATTTTGTCTTTCT 59.013 29.630 0.00 0.00 40.04 2.52
326 327 8.141835 AGCAATGTTTGGTAATTTTGTCTTTC 57.858 30.769 0.00 0.00 40.04 2.62
327 328 7.768120 TGAGCAATGTTTGGTAATTTTGTCTTT 59.232 29.630 0.00 0.00 42.23 2.52
328 329 7.271511 TGAGCAATGTTTGGTAATTTTGTCTT 58.728 30.769 0.00 0.00 42.23 3.01
329 330 6.815089 TGAGCAATGTTTGGTAATTTTGTCT 58.185 32.000 0.00 0.00 42.23 3.41
330 331 7.656707 ATGAGCAATGTTTGGTAATTTTGTC 57.343 32.000 0.00 0.00 42.23 3.18
331 332 7.714377 TCAATGAGCAATGTTTGGTAATTTTGT 59.286 29.630 0.34 0.00 39.57 2.83
332 333 8.085720 TCAATGAGCAATGTTTGGTAATTTTG 57.914 30.769 0.34 0.48 39.57 2.44
333 334 7.933033 ACTCAATGAGCAATGTTTGGTAATTTT 59.067 29.630 10.62 0.00 39.57 1.82
334 335 7.385752 CACTCAATGAGCAATGTTTGGTAATTT 59.614 33.333 10.62 0.00 39.57 1.82
335 336 6.869913 CACTCAATGAGCAATGTTTGGTAATT 59.130 34.615 10.62 0.00 41.68 1.40
336 337 6.392354 CACTCAATGAGCAATGTTTGGTAAT 58.608 36.000 10.62 0.00 42.23 1.89
337 338 5.771469 CACTCAATGAGCAATGTTTGGTAA 58.229 37.500 10.62 0.00 42.23 2.85
338 339 4.321156 GCACTCAATGAGCAATGTTTGGTA 60.321 41.667 10.62 0.00 42.23 3.25
339 340 3.553508 GCACTCAATGAGCAATGTTTGGT 60.554 43.478 10.62 0.00 45.34 3.67
340 341 2.991190 GCACTCAATGAGCAATGTTTGG 59.009 45.455 10.62 0.00 32.04 3.28
341 342 3.644823 TGCACTCAATGAGCAATGTTTG 58.355 40.909 10.62 0.27 39.21 2.93
342 343 4.325028 TTGCACTCAATGAGCAATGTTT 57.675 36.364 10.62 0.00 44.85 2.83
401 402 1.633945 AGGATAACCGGGGAATATGCC 59.366 52.381 6.32 0.00 41.83 4.40
413 414 3.555168 CCATAACTGCGGAGAGGATAACC 60.555 52.174 12.26 0.00 0.00 2.85
476 478 3.406728 TGAGAGCAAACTATCTCGTCG 57.593 47.619 0.00 0.00 44.04 5.12
484 486 5.186942 ACTCTAGACGATGAGAGCAAACTA 58.813 41.667 10.68 0.00 42.56 2.24
488 490 4.380973 CCAAACTCTAGACGATGAGAGCAA 60.381 45.833 10.68 0.00 42.56 3.91
550 555 0.620556 ACCATCAGCCCTTACACCAG 59.379 55.000 0.00 0.00 0.00 4.00
561 566 3.364366 CGACTTCTTGTTGAACCATCAGC 60.364 47.826 0.00 0.00 36.78 4.26
568 573 5.659048 AGATTGTCGACTTCTTGTTGAAC 57.341 39.130 17.92 0.00 40.49 3.18
642 647 5.900437 AGGCCAATTAATGATGGATCAGAT 58.100 37.500 5.01 0.00 40.64 2.90
665 670 7.868922 TGAAGTTGCTTAACATTAAGTCGTCTA 59.131 33.333 11.93 0.00 41.63 2.59
672 677 9.079833 CCAATCATGAAGTTGCTTAACATTAAG 57.920 33.333 0.00 6.97 42.30 1.85
724 729 6.995511 AAATAAATAAGTAGCAGACGCCAA 57.004 33.333 0.00 0.00 39.83 4.52
725 730 6.995511 AAAATAAATAAGTAGCAGACGCCA 57.004 33.333 0.00 0.00 39.83 5.69
800 818 8.208903 ACTAAGAAGTAGCAAAACCAAGACTAA 58.791 33.333 0.00 0.00 32.84 2.24
849 867 5.815222 AGTACAAAGCCAAATGGTGAAAAAC 59.185 36.000 0.71 0.00 37.57 2.43
881 899 3.820557 TGCATTGATAGAAACCCCTAGC 58.179 45.455 0.00 0.00 0.00 3.42
885 903 5.596836 TCAATTGCATTGATAGAAACCCC 57.403 39.130 0.00 0.00 43.84 4.95
899 917 2.351641 GGATGAAAGCGTGTCAATTGCA 60.352 45.455 0.00 0.00 0.00 4.08
901 919 3.557577 TGGATGAAAGCGTGTCAATTG 57.442 42.857 0.00 0.00 0.00 2.32
926 944 6.476380 CGGATGCATGCACAACTAATATTTTT 59.524 34.615 25.37 0.52 0.00 1.94
932 950 2.642427 TCGGATGCATGCACAACTAAT 58.358 42.857 25.37 4.65 0.00 1.73
985 1003 9.905713 CCCTTTATATGCATAATACTATGTGGT 57.094 33.333 11.13 0.00 37.76 4.16
1000 1018 7.390027 TGCTTATCTTCTCTCCCTTTATATGC 58.610 38.462 0.00 0.00 0.00 3.14
1001 1019 8.592809 ACTGCTTATCTTCTCTCCCTTTATATG 58.407 37.037 0.00 0.00 0.00 1.78
1002 1020 8.734593 ACTGCTTATCTTCTCTCCCTTTATAT 57.265 34.615 0.00 0.00 0.00 0.86
1003 1021 8.424918 CAACTGCTTATCTTCTCTCCCTTTATA 58.575 37.037 0.00 0.00 0.00 0.98
1004 1022 7.092668 ACAACTGCTTATCTTCTCTCCCTTTAT 60.093 37.037 0.00 0.00 0.00 1.40
1005 1023 6.213600 ACAACTGCTTATCTTCTCTCCCTTTA 59.786 38.462 0.00 0.00 0.00 1.85
1006 1024 5.013599 ACAACTGCTTATCTTCTCTCCCTTT 59.986 40.000 0.00 0.00 0.00 3.11
1008 1026 4.100373 ACAACTGCTTATCTTCTCTCCCT 58.900 43.478 0.00 0.00 0.00 4.20
1009 1027 4.479786 ACAACTGCTTATCTTCTCTCCC 57.520 45.455 0.00 0.00 0.00 4.30
1010 1028 6.458232 TCTACAACTGCTTATCTTCTCTCC 57.542 41.667 0.00 0.00 0.00 3.71
1011 1029 7.711846 TCATCTACAACTGCTTATCTTCTCTC 58.288 38.462 0.00 0.00 0.00 3.20
1012 1030 7.652524 TCATCTACAACTGCTTATCTTCTCT 57.347 36.000 0.00 0.00 0.00 3.10
1013 1031 7.761704 TGTTCATCTACAACTGCTTATCTTCTC 59.238 37.037 0.00 0.00 0.00 2.87
1014 1032 7.547370 GTGTTCATCTACAACTGCTTATCTTCT 59.453 37.037 0.00 0.00 0.00 2.85
1015 1033 7.331934 TGTGTTCATCTACAACTGCTTATCTTC 59.668 37.037 0.00 0.00 0.00 2.87
1016 1034 7.118390 GTGTGTTCATCTACAACTGCTTATCTT 59.882 37.037 0.00 0.00 0.00 2.40
1017 1035 6.591834 GTGTGTTCATCTACAACTGCTTATCT 59.408 38.462 0.00 0.00 0.00 1.98
1018 1036 6.454318 CGTGTGTTCATCTACAACTGCTTATC 60.454 42.308 0.00 0.00 0.00 1.75
1019 1037 5.348724 CGTGTGTTCATCTACAACTGCTTAT 59.651 40.000 0.00 0.00 0.00 1.73
1020 1038 4.684242 CGTGTGTTCATCTACAACTGCTTA 59.316 41.667 0.00 0.00 0.00 3.09
1021 1039 3.494626 CGTGTGTTCATCTACAACTGCTT 59.505 43.478 0.00 0.00 0.00 3.91
1022 1040 3.059884 CGTGTGTTCATCTACAACTGCT 58.940 45.455 0.00 0.00 0.00 4.24
1023 1041 2.411547 GCGTGTGTTCATCTACAACTGC 60.412 50.000 0.00 0.00 0.00 4.40
1024 1042 2.799978 TGCGTGTGTTCATCTACAACTG 59.200 45.455 0.00 0.00 0.00 3.16
1067 1085 3.846430 CCGCCCTCGAGTTACCCC 61.846 72.222 12.31 0.00 38.10 4.95
1082 1129 1.378382 TCATCCCACCATTGCACCG 60.378 57.895 0.00 0.00 0.00 4.94
1090 1137 2.672908 CTGCTGCTCATCCCACCA 59.327 61.111 0.00 0.00 0.00 4.17
1138 1185 4.750598 GGAGAAACACAGGAAGTACTGAAC 59.249 45.833 0.00 0.00 40.97 3.18
1165 1212 0.250166 ATACGGGATTTACGCCTGGC 60.250 55.000 9.11 9.11 36.06 4.85
1218 1265 0.806102 GAGCGTCGCTGCCAAGATAA 60.806 55.000 27.16 0.00 39.88 1.75
1272 1319 0.898320 GGTACTGCAGCCTCTTCTGA 59.102 55.000 15.27 0.00 36.19 3.27
1300 1347 2.708325 GAGCCCATAGGACCTGAAGATT 59.292 50.000 3.53 0.00 33.47 2.40
1375 1422 2.605366 GCTTCCATAGCTCGTTGTCTTC 59.395 50.000 0.00 0.00 46.77 2.87
1473 1520 9.905713 AAAGCTATAACTTCATGTAATCTGGAA 57.094 29.630 0.00 0.00 0.00 3.53
1512 1559 5.102313 CACTTGGTCAAACTTGAAAAGGTC 58.898 41.667 15.37 0.00 43.11 3.85
1535 1582 4.248859 TGTGCTTCTCACTTTCTCTATGC 58.751 43.478 0.00 0.00 45.81 3.14
1643 1690 7.763356 TCAATTTGACAAAGTCCGTAGAAAAA 58.237 30.769 6.77 0.00 0.00 1.94
1644 1691 7.323049 TCAATTTGACAAAGTCCGTAGAAAA 57.677 32.000 6.77 0.00 0.00 2.29
1651 1698 4.829064 TCCTTCAATTTGACAAAGTCCG 57.171 40.909 6.77 0.00 0.00 4.79
1663 1710 6.323739 TGTTCTAAGCCAAACTTCCTTCAATT 59.676 34.615 0.00 0.00 39.97 2.32
1664 1711 5.833131 TGTTCTAAGCCAAACTTCCTTCAAT 59.167 36.000 0.00 0.00 39.97 2.57
1665 1712 5.197451 TGTTCTAAGCCAAACTTCCTTCAA 58.803 37.500 0.00 0.00 39.97 2.69
1666 1713 4.787551 TGTTCTAAGCCAAACTTCCTTCA 58.212 39.130 0.00 0.00 39.97 3.02
1667 1714 5.278512 CCTTGTTCTAAGCCAAACTTCCTTC 60.279 44.000 0.00 0.00 39.97 3.46
1668 1715 4.584743 CCTTGTTCTAAGCCAAACTTCCTT 59.415 41.667 0.00 0.00 39.97 3.36
1669 1716 4.145052 CCTTGTTCTAAGCCAAACTTCCT 58.855 43.478 0.00 0.00 39.97 3.36
1670 1717 3.255888 CCCTTGTTCTAAGCCAAACTTCC 59.744 47.826 0.00 0.00 39.97 3.46
1671 1718 3.255888 CCCCTTGTTCTAAGCCAAACTTC 59.744 47.826 0.00 0.00 39.97 3.01
1700 1747 3.199946 TGAGGGGAAAATAGTGGCTACAG 59.800 47.826 2.02 0.00 0.00 2.74
1740 1787 7.633334 GCAATCCATCCATTCCAAATTACTTCA 60.633 37.037 0.00 0.00 0.00 3.02
1760 1807 4.248859 AGCATCGATATGTGTAGCAATCC 58.751 43.478 0.00 0.00 35.38 3.01
1824 1871 5.065218 CGGTCAAATTGGAGTGGAGAAATAG 59.935 44.000 0.00 0.00 0.00 1.73
1934 1981 0.875059 GAGAACCCCAGCGACAAAAG 59.125 55.000 0.00 0.00 0.00 2.27
2007 2054 1.621814 TCCTCGGGTGAAAAGTACCTG 59.378 52.381 0.00 0.00 44.34 4.00
2077 2124 3.068729 GAATGGCGGCCCTTGCTTC 62.069 63.158 17.97 7.93 37.74 3.86
2089 2136 3.763897 TCTTTTTGCCTTAGGAGAATGGC 59.236 43.478 0.69 0.00 45.10 4.40
2117 2164 3.625745 CTGGTCTTGCCGGTTAGTT 57.374 52.632 1.90 0.00 41.21 2.24
2307 2354 1.156736 CGAATTCGCCTCCTGTTGTT 58.843 50.000 15.93 0.00 0.00 2.83
2342 2389 5.477291 ACCATGTAGTATAAGATCCTCCGTG 59.523 44.000 0.00 0.00 0.00 4.94
2430 2477 4.193090 ACAAGACAAATGTAACACCGACA 58.807 39.130 0.00 0.00 0.00 4.35
2628 2675 0.184451 CCTCCCACCCATCTTGGATG 59.816 60.000 0.00 0.97 40.96 3.51
2675 2722 3.054875 CCCTCTGACATCATTGAACTCCA 60.055 47.826 0.00 0.00 0.00 3.86
2707 2754 2.486966 GCATCCCTTGCGCTCAAC 59.513 61.111 9.73 0.00 42.54 3.18
2816 2863 1.221840 GCATGGTCCGGAGATGTGT 59.778 57.895 19.82 0.00 0.00 3.72
2820 2867 2.037620 GCTCAGCATGGTCCGGAGAT 62.038 60.000 3.06 0.00 36.16 2.75
2849 2896 8.192774 CCATATAATTCGATATTTGCCTGCATT 58.807 33.333 0.00 0.00 0.00 3.56
2943 2990 4.926244 AGATGTCGTAGAGTTGTGCATAG 58.074 43.478 0.00 0.00 36.95 2.23
2944 2991 4.983671 AGATGTCGTAGAGTTGTGCATA 57.016 40.909 0.00 0.00 36.95 3.14
2956 3003 5.186215 TCACATGACCCTTTAAGATGTCGTA 59.814 40.000 0.00 0.00 0.00 3.43
2957 3004 4.020573 TCACATGACCCTTTAAGATGTCGT 60.021 41.667 0.00 0.00 0.00 4.34
2958 3005 4.503910 TCACATGACCCTTTAAGATGTCG 58.496 43.478 0.00 0.00 0.00 4.35
2986 3033 4.210331 ACCACTTTCTGAGCAAGTTCATT 58.790 39.130 0.00 0.00 31.83 2.57
3035 3082 5.504994 GCATCTCGAACAAAACAACCTTGTA 60.505 40.000 0.00 0.00 41.31 2.41
3064 3111 5.730568 GCCGTATCAACCTTTTAGCAATCAG 60.731 44.000 0.00 0.00 0.00 2.90
3084 3131 1.046472 TGTTATCATCCCCGAGCCGT 61.046 55.000 0.00 0.00 0.00 5.68
3087 3134 2.910688 TCTTGTTATCATCCCCGAGC 57.089 50.000 0.00 0.00 0.00 5.03
3099 3146 4.780554 TGTATCACCTCCCACATCTTGTTA 59.219 41.667 0.00 0.00 0.00 2.41
3158 3205 0.469917 CAAGTATCCCCGGCATCTGT 59.530 55.000 0.00 0.00 0.00 3.41
3234 3281 1.748122 CTCCATCCCAGTGCAGTGC 60.748 63.158 16.47 8.58 0.00 4.40
3266 3313 1.268079 GCTTTTGTGTCCTCTGAAGCC 59.732 52.381 0.00 0.00 34.87 4.35
3286 3333 2.737252 GCTTCTTCTTGGACAACCGTAG 59.263 50.000 0.00 0.00 39.42 3.51
3288 3335 1.594331 GCTTCTTCTTGGACAACCGT 58.406 50.000 0.00 0.00 39.42 4.83
3291 3338 0.238553 GCGGCTTCTTCTTGGACAAC 59.761 55.000 0.00 0.00 0.00 3.32
3316 3363 3.649277 CTTCTCGGCTCCCACGGTG 62.649 68.421 0.00 0.00 0.00 4.94
3338 3385 1.153086 GAACTGGATGGAGCGGCAT 60.153 57.895 1.45 0.00 0.00 4.40
3351 3398 2.787994 AGGTTCATGCCTTGAGAACTG 58.212 47.619 0.00 0.00 40.97 3.16
3369 3416 2.603075 TTCCATCCTTTGTGGGAAGG 57.397 50.000 0.00 0.00 46.17 3.46
3404 3451 1.675641 CCTTCACTTGGGGAAGCCG 60.676 63.158 4.20 0.00 40.29 5.52
3413 3460 0.689623 AGGAGAGGTGCCTTCACTTG 59.310 55.000 0.00 0.00 42.72 3.16
3443 3490 8.716646 TTATCGTAATGACACAACAATCTCAT 57.283 30.769 0.00 0.00 0.00 2.90
3515 3562 5.819991 ACACTCACAACCTGAATCCATATT 58.180 37.500 0.00 0.00 0.00 1.28
3568 3617 9.715123 CATATTGCATAGATAACAAACGACAAA 57.285 29.630 0.00 0.00 0.00 2.83
3612 3695 6.434652 TCTGTGAAACTAAAACTTGGAACCAA 59.565 34.615 6.12 6.12 38.04 3.67
3626 3709 7.439356 CACACTTTCTCTTGATCTGTGAAACTA 59.561 37.037 0.00 0.00 38.04 2.24
3637 3720 4.322080 TCGACACACACTTTCTCTTGAT 57.678 40.909 0.00 0.00 0.00 2.57
3662 3745 6.149308 TGCCTATGCCAATAATCATTTACTCG 59.851 38.462 0.00 0.00 36.33 4.18
3710 3797 2.039879 ACAAAACGGGCTCCTCTGTATT 59.960 45.455 0.00 0.00 0.00 1.89
3730 3817 5.805486 TCGATGAGCTCTAAATGTACAACAC 59.195 40.000 16.19 0.00 0.00 3.32
3752 3839 4.260784 GCCTAGTTTCATGGTATGCTTTCG 60.261 45.833 0.00 0.00 0.00 3.46
3807 3894 5.709164 CCATCTTCTGTGAACAAGGAAAGAT 59.291 40.000 0.00 0.00 0.00 2.40
3818 3905 4.081420 GCTAAGGAGACCATCTTCTGTGAA 60.081 45.833 0.00 0.00 31.27 3.18
3822 3909 4.686191 ATGCTAAGGAGACCATCTTCTG 57.314 45.455 0.00 0.00 31.27 3.02
3824 3911 5.510520 CCTGTATGCTAAGGAGACCATCTTC 60.511 48.000 0.00 0.00 35.40 2.87
3946 4037 1.826921 GTCATCCTCTCCGGCGGTA 60.827 63.158 27.32 14.54 0.00 4.02
3974 4065 0.037232 TCAGAGAGAGTGCGAGACGA 60.037 55.000 0.00 0.00 0.00 4.20
3998 4089 3.065371 GCAGGAGGTATCGTTGAAATTGG 59.935 47.826 0.00 0.00 0.00 3.16
4010 4101 0.266152 ACTAGCCCAGCAGGAGGTAT 59.734 55.000 0.00 0.00 38.24 2.73
4021 4112 3.065306 CCAACGTCCACTAGCCCA 58.935 61.111 0.00 0.00 0.00 5.36
4074 4165 6.757317 AGGTCCCTATGCTATGAATAGGTAT 58.243 40.000 9.94 0.00 43.57 2.73
4077 4168 4.407296 GGAGGTCCCTATGCTATGAATAGG 59.593 50.000 4.91 4.91 44.35 2.57
4158 4252 3.926821 TTATATGCTGTGTCGCGGATA 57.073 42.857 6.13 0.00 0.00 2.59
4215 4309 6.634805 AGATCATGTCGTTGTTGTTCTATCT 58.365 36.000 0.00 0.00 0.00 1.98
4219 4313 4.214119 CCAAGATCATGTCGTTGTTGTTCT 59.786 41.667 0.00 0.00 0.00 3.01
4240 4334 5.976458 AGAAGAACTGAAAATGCAAAACCA 58.024 33.333 0.00 0.00 0.00 3.67
4348 4449 2.238646 TCGGCCTGACATAATTGAAGGT 59.761 45.455 0.00 0.00 34.61 3.50
4416 4517 0.803117 TTGACGAGTGCTAGGAGTCG 59.197 55.000 32.16 32.16 43.19 4.18
4441 4542 4.062293 CGATGACAACCCTTGTGTTTCTA 58.938 43.478 0.00 0.00 45.52 2.10
4478 4579 3.303990 GCTGTGTCGTCATCACATTTGTT 60.304 43.478 0.00 0.00 43.39 2.83
4546 4647 7.885399 GCCTTATAAACTGGATGGAATGAGTAT 59.115 37.037 0.00 0.00 0.00 2.12
4554 4655 2.105821 CGGGCCTTATAAACTGGATGGA 59.894 50.000 0.84 0.00 0.00 3.41
4596 4716 7.503521 TTGCTGACACAATACTTTTGTATGA 57.496 32.000 0.00 0.00 44.21 2.15
4609 4729 9.237187 TCTAATGGTATAATTTTGCTGACACAA 57.763 29.630 0.00 0.00 0.00 3.33
4610 4730 8.800370 TCTAATGGTATAATTTTGCTGACACA 57.200 30.769 0.00 0.00 0.00 3.72
4655 4775 4.634004 GCACTGCAAAACTAAACCCTTTTT 59.366 37.500 0.00 0.00 0.00 1.94
4656 4776 4.188462 GCACTGCAAAACTAAACCCTTTT 58.812 39.130 0.00 0.00 0.00 2.27
4657 4777 3.196685 TGCACTGCAAAACTAAACCCTTT 59.803 39.130 0.00 0.00 34.76 3.11
4660 4780 2.880963 TGCACTGCAAAACTAAACCC 57.119 45.000 0.00 0.00 34.76 4.11
4664 4784 6.633500 AAGAGTAATGCACTGCAAAACTAA 57.367 33.333 17.25 0.00 43.62 2.24
4667 4787 5.400485 CAGAAAGAGTAATGCACTGCAAAAC 59.600 40.000 8.03 9.18 43.62 2.43
4677 4797 2.819608 TGGCCAACAGAAAGAGTAATGC 59.180 45.455 0.61 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.