Multiple sequence alignment - TraesCS2D01G590200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G590200 chr2D 100.000 4007 0 0 1 4007 646416485 646420491 0.000000e+00 7400
1 TraesCS2D01G590200 chr2D 98.043 460 8 1 1 460 28935509 28935967 0.000000e+00 798
2 TraesCS2D01G590200 chr2D 85.154 357 38 10 1377 1719 140467366 140467721 6.370000e-93 351
3 TraesCS2D01G590200 chr2A 92.595 1904 62 19 1151 3035 773230714 773228871 0.000000e+00 2662
4 TraesCS2D01G590200 chr2A 87.936 1061 54 30 697 1693 773231235 773230185 0.000000e+00 1182
5 TraesCS2D01G590200 chr2A 95.765 425 10 2 3034 3456 773228751 773228333 0.000000e+00 678
6 TraesCS2D01G590200 chr2A 84.262 305 34 6 3565 3856 733813970 733813667 6.550000e-73 285
7 TraesCS2D01G590200 chr2A 90.654 214 4 8 500 699 773231480 773231269 1.840000e-68 270
8 TraesCS2D01G590200 chr2B 94.344 1662 53 17 1392 3035 789265352 789263714 0.000000e+00 2510
9 TraesCS2D01G590200 chr2B 92.080 846 39 9 3034 3855 789263632 789262791 0.000000e+00 1166
10 TraesCS2D01G590200 chr2B 86.475 902 46 24 515 1388 789266304 789265451 0.000000e+00 920
11 TraesCS2D01G590200 chr1B 85.994 2142 184 52 1141 3220 152524388 152522301 0.000000e+00 2187
12 TraesCS2D01G590200 chr1B 82.116 671 83 21 1434 2090 22894695 22895342 1.270000e-149 540
13 TraesCS2D01G590200 chr1B 82.353 153 15 7 983 1123 152524591 152524439 5.440000e-24 122
14 TraesCS2D01G590200 chr1B 87.500 96 12 0 782 877 152524816 152524721 1.180000e-20 111
15 TraesCS2D01G590200 chr1A 84.012 2383 222 87 1141 3442 95183597 95185901 0.000000e+00 2143
16 TraesCS2D01G590200 chr1A 81.410 156 15 7 779 921 95183140 95183294 9.100000e-22 115
17 TraesCS2D01G590200 chr1D 89.366 978 73 15 2489 3440 99803719 99804691 0.000000e+00 1201
18 TraesCS2D01G590200 chr1D 82.564 1170 118 35 1141 2258 99801635 99802770 0.000000e+00 952
19 TraesCS2D01G590200 chr1D 97.840 463 8 2 1 461 144666570 144666108 0.000000e+00 798
20 TraesCS2D01G590200 chr1D 97.826 460 9 1 1 460 457618413 457617955 0.000000e+00 793
21 TraesCS2D01G590200 chr1D 86.410 390 37 4 3479 3856 437473124 437473509 2.880000e-111 412
22 TraesCS2D01G590200 chr1D 84.874 357 39 10 1377 1719 19790936 19791291 2.960000e-91 346
23 TraesCS2D01G590200 chr1D 86.458 96 13 0 779 874 99801165 99801260 5.480000e-19 106
24 TraesCS2D01G590200 chr3D 98.043 460 9 0 1 460 613097885 613097426 0.000000e+00 800
25 TraesCS2D01G590200 chr3D 86.828 372 36 3 3472 3831 384438550 384438180 1.730000e-108 403
26 TraesCS2D01G590200 chr3D 82.872 397 52 10 3474 3856 68915793 68915399 3.830000e-90 342
27 TraesCS2D01G590200 chr7D 97.826 460 8 1 1 460 596019864 596019407 0.000000e+00 793
28 TraesCS2D01G590200 chr7D 97.614 461 8 1 1 461 600582910 600582453 0.000000e+00 787
29 TraesCS2D01G590200 chrUn 97.222 468 10 1 1 468 24535496 24535032 0.000000e+00 789
30 TraesCS2D01G590200 chr4D 97.609 460 11 0 1 460 6364883 6364424 0.000000e+00 789
31 TraesCS2D01G590200 chr4D 84.574 376 51 4 3478 3847 49514757 49514383 2.280000e-97 366
32 TraesCS2D01G590200 chr6D 96.610 472 12 4 1 471 418184244 418183776 0.000000e+00 780
33 TraesCS2D01G590200 chr6D 86.726 226 25 4 3635 3856 7166167 7165943 3.090000e-61 246
34 TraesCS2D01G590200 chr3B 80.842 689 92 23 1379 2049 350128883 350128217 4.620000e-139 505
35 TraesCS2D01G590200 chr3B 82.842 373 57 6 3477 3847 407466382 407466749 1.070000e-85 327
36 TraesCS2D01G590200 chr3B 83.284 335 49 5 3502 3831 740553811 740554143 6.510000e-78 302
37 TraesCS2D01G590200 chr3B 82.906 351 38 13 1385 1719 196579258 196579602 3.030000e-76 296
38 TraesCS2D01G590200 chr3B 82.450 302 23 15 2046 2347 350032334 350032063 1.860000e-58 237
39 TraesCS2D01G590200 chr6A 85.930 398 41 4 3473 3856 6830670 6830274 1.040000e-110 411
40 TraesCS2D01G590200 chr4A 85.753 365 41 6 3474 3838 731061397 731061750 3.780000e-100 375
41 TraesCS2D01G590200 chr5D 82.824 425 37 6 3468 3856 238903437 238903013 8.240000e-92 348
42 TraesCS2D01G590200 chr4B 81.937 382 63 6 3468 3847 109823953 109823576 6.460000e-83 318
43 TraesCS2D01G590200 chr6B 83.761 351 35 13 1385 1719 255078012 255077668 3.010000e-81 313


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G590200 chr2D 646416485 646420491 4006 False 7400.000000 7400 100.000000 1 4007 1 chr2D.!!$F3 4006
1 TraesCS2D01G590200 chr2A 773228333 773231480 3147 True 1198.000000 2662 91.737500 500 3456 4 chr2A.!!$R2 2956
2 TraesCS2D01G590200 chr2B 789262791 789266304 3513 True 1532.000000 2510 90.966333 515 3855 3 chr2B.!!$R1 3340
3 TraesCS2D01G590200 chr1B 152522301 152524816 2515 True 806.666667 2187 85.282333 782 3220 3 chr1B.!!$R1 2438
4 TraesCS2D01G590200 chr1B 22894695 22895342 647 False 540.000000 540 82.116000 1434 2090 1 chr1B.!!$F1 656
5 TraesCS2D01G590200 chr1A 95183140 95185901 2761 False 1129.000000 2143 82.711000 779 3442 2 chr1A.!!$F1 2663
6 TraesCS2D01G590200 chr1D 99801165 99804691 3526 False 753.000000 1201 86.129333 779 3440 3 chr1D.!!$F3 2661
7 TraesCS2D01G590200 chr3B 350128217 350128883 666 True 505.000000 505 80.842000 1379 2049 1 chr3B.!!$R2 670

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
207 208 0.037734 AAACCCTAAACCTGCGGAGG 59.962 55.0 22.94 22.94 46.21 4.30 F
387 388 0.103572 GGGGTCTTTAGTCGCGCATA 59.896 55.0 8.75 0.00 0.00 3.14 F
1719 2122 0.106469 TGTTTGTGTTGCCCCTGCTA 60.106 50.0 0.00 0.00 38.71 3.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1374 1619 3.883830 TTAGCAGAAGAGAAGAGGCAG 57.116 47.619 0.00 0.0 0.00 4.85 R
2265 2701 4.041740 TCTCAGCGCTGTATTAATTCGT 57.958 40.909 34.70 0.0 0.00 3.85 R
3568 4948 0.174162 GGGTGGCTTGATGCATGTTC 59.826 55.000 2.46 0.0 45.15 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 7.880160 TTCCTCTTGAATTCTTCTTGTTTGA 57.120 32.000 7.05 0.00 0.00 2.69
54 55 7.880160 TCCTCTTGAATTCTTCTTGTTTGAA 57.120 32.000 7.05 0.00 0.00 2.69
55 56 8.292444 TCCTCTTGAATTCTTCTTGTTTGAAA 57.708 30.769 7.05 0.00 0.00 2.69
56 57 8.917088 TCCTCTTGAATTCTTCTTGTTTGAAAT 58.083 29.630 7.05 0.00 0.00 2.17
57 58 9.538508 CCTCTTGAATTCTTCTTGTTTGAAATT 57.461 29.630 7.05 0.00 0.00 1.82
66 67 9.761504 TTCTTCTTGTTTGAAATTTCATATGCA 57.238 25.926 21.10 13.98 37.00 3.96
67 68 9.932207 TCTTCTTGTTTGAAATTTCATATGCAT 57.068 25.926 21.10 3.79 37.00 3.96
68 69 9.967245 CTTCTTGTTTGAAATTTCATATGCATG 57.033 29.630 21.10 16.75 37.00 4.06
69 70 9.491675 TTCTTGTTTGAAATTTCATATGCATGT 57.508 25.926 21.10 0.00 37.00 3.21
84 85 9.555727 TCATATGCATGTATATAGTAGCGTAGA 57.444 33.333 14.95 3.89 33.57 2.59
97 98 8.843885 ATAGTAGCGTAGAATATGTGTACTGA 57.156 34.615 0.00 0.00 33.95 3.41
98 99 7.563888 AGTAGCGTAGAATATGTGTACTGAA 57.436 36.000 0.00 0.00 32.08 3.02
99 100 7.993101 AGTAGCGTAGAATATGTGTACTGAAA 58.007 34.615 0.00 0.00 32.08 2.69
100 101 7.914346 AGTAGCGTAGAATATGTGTACTGAAAC 59.086 37.037 0.00 0.00 32.08 2.78
101 102 6.864342 AGCGTAGAATATGTGTACTGAAACT 58.136 36.000 0.00 0.00 0.00 2.66
102 103 7.321153 AGCGTAGAATATGTGTACTGAAACTT 58.679 34.615 0.00 0.00 0.00 2.66
103 104 7.488471 AGCGTAGAATATGTGTACTGAAACTTC 59.512 37.037 0.00 0.00 0.00 3.01
104 105 7.274904 GCGTAGAATATGTGTACTGAAACTTCA 59.725 37.037 0.00 0.00 35.57 3.02
105 106 9.302345 CGTAGAATATGTGTACTGAAACTTCAT 57.698 33.333 0.00 0.00 36.46 2.57
108 109 9.725019 AGAATATGTGTACTGAAACTTCATCAA 57.275 29.630 0.00 0.00 36.46 2.57
113 114 8.219546 TGTGTACTGAAACTTCATCAAAATCA 57.780 30.769 0.00 0.00 36.46 2.57
114 115 8.681806 TGTGTACTGAAACTTCATCAAAATCAA 58.318 29.630 0.00 0.00 36.46 2.57
115 116 9.515020 GTGTACTGAAACTTCATCAAAATCAAA 57.485 29.630 0.00 0.00 36.46 2.69
174 175 9.594478 AACACTACAAATTAAAAAGAAACCAGG 57.406 29.630 0.00 0.00 0.00 4.45
175 176 8.755028 ACACTACAAATTAAAAAGAAACCAGGT 58.245 29.630 0.00 0.00 0.00 4.00
176 177 9.594478 CACTACAAATTAAAAAGAAACCAGGTT 57.406 29.630 0.00 0.00 0.00 3.50
180 181 9.607988 ACAAATTAAAAAGAAACCAGGTTTAGG 57.392 29.630 18.08 0.00 35.77 2.69
181 182 9.051679 CAAATTAAAAAGAAACCAGGTTTAGGG 57.948 33.333 18.08 0.00 35.77 3.53
182 183 6.734502 TTAAAAAGAAACCAGGTTTAGGGG 57.265 37.500 18.08 0.00 35.77 4.79
183 184 2.992847 AAGAAACCAGGTTTAGGGGG 57.007 50.000 18.08 0.00 35.77 5.40
203 204 1.471287 GGCTAAAACCCTAAACCTGCG 59.529 52.381 0.00 0.00 0.00 5.18
204 205 1.471287 GCTAAAACCCTAAACCTGCGG 59.529 52.381 0.00 0.00 0.00 5.69
205 206 2.876892 GCTAAAACCCTAAACCTGCGGA 60.877 50.000 0.00 0.00 0.00 5.54
206 207 1.905637 AAAACCCTAAACCTGCGGAG 58.094 50.000 0.00 0.00 0.00 4.63
207 208 0.037734 AAACCCTAAACCTGCGGAGG 59.962 55.000 22.94 22.94 46.21 4.30
208 209 0.838987 AACCCTAAACCTGCGGAGGA 60.839 55.000 31.46 6.29 42.93 3.71
216 217 3.309582 CTGCGGAGGAGGCCTTTA 58.690 61.111 6.77 0.00 44.33 1.85
217 218 1.144936 CTGCGGAGGAGGCCTTTAG 59.855 63.158 6.77 0.00 44.33 1.85
218 219 1.612442 TGCGGAGGAGGCCTTTAGT 60.612 57.895 6.77 0.00 31.76 2.24
219 220 1.144276 GCGGAGGAGGCCTTTAGTC 59.856 63.158 6.77 0.92 31.76 2.59
220 221 1.823976 CGGAGGAGGCCTTTAGTCC 59.176 63.158 6.77 10.10 31.76 3.85
221 222 1.687297 CGGAGGAGGCCTTTAGTCCC 61.687 65.000 6.77 1.20 31.76 4.46
222 223 1.687297 GGAGGAGGCCTTTAGTCCCG 61.687 65.000 6.77 0.00 31.76 5.14
223 224 1.687297 GAGGAGGCCTTTAGTCCCGG 61.687 65.000 6.77 0.00 31.76 5.73
224 225 1.993948 GGAGGCCTTTAGTCCCGGT 60.994 63.158 6.77 0.00 0.00 5.28
225 226 1.559965 GGAGGCCTTTAGTCCCGGTT 61.560 60.000 6.77 0.00 0.00 4.44
226 227 1.197812 GAGGCCTTTAGTCCCGGTTA 58.802 55.000 6.77 0.00 0.00 2.85
227 228 1.138464 GAGGCCTTTAGTCCCGGTTAG 59.862 57.143 6.77 0.00 0.00 2.34
228 229 0.463295 GGCCTTTAGTCCCGGTTAGC 60.463 60.000 0.00 0.00 0.00 3.09
229 230 0.463295 GCCTTTAGTCCCGGTTAGCC 60.463 60.000 0.00 0.00 0.00 3.93
230 231 0.906775 CCTTTAGTCCCGGTTAGCCA 59.093 55.000 0.00 0.00 34.09 4.75
231 232 1.406477 CCTTTAGTCCCGGTTAGCCAC 60.406 57.143 0.00 0.00 34.09 5.01
232 233 0.247185 TTTAGTCCCGGTTAGCCACG 59.753 55.000 0.00 0.00 34.09 4.94
233 234 0.611618 TTAGTCCCGGTTAGCCACGA 60.612 55.000 0.00 0.00 34.09 4.35
234 235 1.033746 TAGTCCCGGTTAGCCACGAG 61.034 60.000 0.00 0.00 34.09 4.18
235 236 2.036098 TCCCGGTTAGCCACGAGA 59.964 61.111 0.00 0.00 34.09 4.04
236 237 1.607178 TCCCGGTTAGCCACGAGAA 60.607 57.895 0.00 0.00 34.09 2.87
237 238 0.974010 TCCCGGTTAGCCACGAGAAT 60.974 55.000 0.00 0.00 34.09 2.40
238 239 0.529992 CCCGGTTAGCCACGAGAATC 60.530 60.000 0.00 0.00 34.09 2.52
260 261 0.460722 GACTAAAGGTCCTCCGCTCC 59.539 60.000 0.00 0.00 38.93 4.70
261 262 1.321074 ACTAAAGGTCCTCCGCTCCG 61.321 60.000 0.00 0.00 39.05 4.63
262 263 1.000521 TAAAGGTCCTCCGCTCCGA 60.001 57.895 0.00 0.00 39.05 4.55
263 264 1.318158 TAAAGGTCCTCCGCTCCGAC 61.318 60.000 0.00 0.00 39.05 4.79
293 294 3.622826 CCCACGTGGACGGTCCTT 61.623 66.667 36.07 9.42 44.95 3.36
294 295 2.424302 CCACGTGGACGGTCCTTT 59.576 61.111 31.31 9.07 44.95 3.11
295 296 1.667151 CCACGTGGACGGTCCTTTA 59.333 57.895 31.31 5.13 44.95 1.85
296 297 0.389426 CCACGTGGACGGTCCTTTAG 60.389 60.000 31.31 16.69 44.95 1.85
297 298 0.316204 CACGTGGACGGTCCTTTAGT 59.684 55.000 26.41 17.26 44.95 2.24
298 299 0.600057 ACGTGGACGGTCCTTTAGTC 59.400 55.000 26.41 9.89 44.95 2.59
301 302 1.514553 GGACGGTCCTTTAGTCCCG 59.485 63.158 19.92 0.00 46.40 5.14
302 303 1.514553 GACGGTCCTTTAGTCCCGG 59.485 63.158 0.00 0.00 44.57 5.73
303 304 1.228988 ACGGTCCTTTAGTCCCGGT 60.229 57.895 0.00 0.00 44.57 5.28
304 305 0.833409 ACGGTCCTTTAGTCCCGGTT 60.833 55.000 0.00 0.00 44.57 4.44
305 306 1.185315 CGGTCCTTTAGTCCCGGTTA 58.815 55.000 0.00 0.00 36.84 2.85
306 307 1.135721 CGGTCCTTTAGTCCCGGTTAG 59.864 57.143 0.00 0.00 36.84 2.34
307 308 1.134580 GGTCCTTTAGTCCCGGTTAGC 60.135 57.143 0.00 0.00 0.00 3.09
308 309 1.134580 GTCCTTTAGTCCCGGTTAGCC 60.135 57.143 0.00 0.00 0.00 3.93
309 310 0.906775 CCTTTAGTCCCGGTTAGCCA 59.093 55.000 0.00 0.00 34.09 4.75
310 311 1.406477 CCTTTAGTCCCGGTTAGCCAC 60.406 57.143 0.00 0.00 34.09 5.01
311 312 0.247185 TTTAGTCCCGGTTAGCCACG 59.753 55.000 0.00 0.00 34.09 4.94
312 313 0.611618 TTAGTCCCGGTTAGCCACGA 60.612 55.000 0.00 0.00 34.09 4.35
313 314 1.033746 TAGTCCCGGTTAGCCACGAG 61.034 60.000 0.00 0.00 34.09 4.18
314 315 2.036098 TCCCGGTTAGCCACGAGA 59.964 61.111 0.00 0.00 34.09 4.04
315 316 1.607178 TCCCGGTTAGCCACGAGAA 60.607 57.895 0.00 0.00 34.09 2.87
316 317 1.447314 CCCGGTTAGCCACGAGAAC 60.447 63.158 0.00 0.00 34.09 3.01
317 318 1.447314 CCGGTTAGCCACGAGAACC 60.447 63.158 0.00 0.00 39.44 3.62
318 319 4.180496 GGTTAGCCACGAGAACCG 57.820 61.111 0.00 0.00 45.44 4.44
319 320 1.447314 GGTTAGCCACGAGAACCGG 60.447 63.158 0.00 0.00 43.93 5.28
320 321 1.447314 GTTAGCCACGAGAACCGGG 60.447 63.158 6.32 0.00 43.93 5.73
321 322 1.607178 TTAGCCACGAGAACCGGGA 60.607 57.895 6.32 0.00 46.66 5.14
322 323 1.880819 TTAGCCACGAGAACCGGGAC 61.881 60.000 6.32 0.00 46.66 4.46
323 324 2.776370 TAGCCACGAGAACCGGGACT 62.776 60.000 6.32 4.01 46.66 3.85
324 325 2.345760 GCCACGAGAACCGGGACTA 61.346 63.158 6.32 0.00 46.66 2.59
325 326 1.880819 GCCACGAGAACCGGGACTAA 61.881 60.000 6.32 0.00 46.66 2.24
326 327 0.604578 CCACGAGAACCGGGACTAAA 59.395 55.000 6.32 0.00 46.66 1.85
327 328 1.403780 CCACGAGAACCGGGACTAAAG 60.404 57.143 6.32 2.68 46.66 1.85
328 329 0.245813 ACGAGAACCGGGACTAAAGC 59.754 55.000 6.32 0.00 43.93 3.51
329 330 0.459759 CGAGAACCGGGACTAAAGCC 60.460 60.000 6.32 0.00 33.91 4.35
330 331 0.903236 GAGAACCGGGACTAAAGCCT 59.097 55.000 6.32 0.00 0.00 4.58
331 332 1.278413 GAGAACCGGGACTAAAGCCTT 59.722 52.381 6.32 0.00 0.00 4.35
332 333 1.703513 AGAACCGGGACTAAAGCCTTT 59.296 47.619 6.32 0.00 0.00 3.11
333 334 2.908351 AGAACCGGGACTAAAGCCTTTA 59.092 45.455 6.32 0.00 0.00 1.85
334 335 3.055312 AGAACCGGGACTAAAGCCTTTAG 60.055 47.826 20.10 20.10 46.26 1.85
341 342 2.005971 CTAAAGCCTTTAGTCGCGGT 57.994 50.000 14.78 0.00 38.21 5.68
342 343 2.344025 CTAAAGCCTTTAGTCGCGGTT 58.656 47.619 14.78 0.00 38.21 4.44
343 344 1.154197 AAAGCCTTTAGTCGCGGTTC 58.846 50.000 6.13 0.00 0.00 3.62
344 345 1.012486 AAGCCTTTAGTCGCGGTTCG 61.012 55.000 6.13 0.00 40.15 3.95
345 346 1.735559 GCCTTTAGTCGCGGTTCGT 60.736 57.895 6.13 0.00 39.67 3.85
346 347 0.456653 GCCTTTAGTCGCGGTTCGTA 60.457 55.000 6.13 0.00 39.67 3.43
347 348 1.981254 CCTTTAGTCGCGGTTCGTAA 58.019 50.000 6.13 0.00 39.67 3.18
348 349 1.916000 CCTTTAGTCGCGGTTCGTAAG 59.084 52.381 6.13 3.09 39.67 2.34
359 360 4.206958 TCGTAAGAGGCGCGACTA 57.793 55.556 18.29 0.00 45.01 2.59
360 361 2.470156 TCGTAAGAGGCGCGACTAA 58.530 52.632 18.29 0.00 45.01 2.24
361 362 0.376152 TCGTAAGAGGCGCGACTAAG 59.624 55.000 18.29 0.89 45.01 2.18
362 363 0.591741 CGTAAGAGGCGCGACTAAGG 60.592 60.000 18.29 5.49 43.02 2.69
363 364 0.248949 GTAAGAGGCGCGACTAAGGG 60.249 60.000 18.29 0.00 0.00 3.95
364 365 1.389609 TAAGAGGCGCGACTAAGGGG 61.390 60.000 18.29 0.00 0.00 4.79
365 366 3.145551 GAGGCGCGACTAAGGGGA 61.146 66.667 18.29 0.00 0.00 4.81
366 367 3.140225 GAGGCGCGACTAAGGGGAG 62.140 68.421 18.29 0.00 0.00 4.30
367 368 4.222847 GGCGCGACTAAGGGGAGG 62.223 72.222 12.10 0.00 0.00 4.30
368 369 4.222847 GCGCGACTAAGGGGAGGG 62.223 72.222 12.10 0.00 0.00 4.30
369 370 3.537874 CGCGACTAAGGGGAGGGG 61.538 72.222 0.00 0.00 0.00 4.79
370 371 3.162154 GCGACTAAGGGGAGGGGG 61.162 72.222 0.00 0.00 0.00 5.40
384 385 2.510918 GGGGGTCTTTAGTCGCGC 60.511 66.667 0.00 0.00 0.00 6.86
385 386 2.263540 GGGGTCTTTAGTCGCGCA 59.736 61.111 8.75 0.00 0.00 6.09
386 387 1.153429 GGGGTCTTTAGTCGCGCAT 60.153 57.895 8.75 0.00 0.00 4.73
387 388 0.103572 GGGGTCTTTAGTCGCGCATA 59.896 55.000 8.75 0.00 0.00 3.14
388 389 1.270147 GGGGTCTTTAGTCGCGCATAT 60.270 52.381 8.75 0.00 0.00 1.78
389 390 2.480845 GGGTCTTTAGTCGCGCATATT 58.519 47.619 8.75 0.00 0.00 1.28
390 391 2.870411 GGGTCTTTAGTCGCGCATATTT 59.130 45.455 8.75 0.00 0.00 1.40
391 392 4.053295 GGGTCTTTAGTCGCGCATATTTA 58.947 43.478 8.75 0.00 0.00 1.40
392 393 4.150098 GGGTCTTTAGTCGCGCATATTTAG 59.850 45.833 8.75 0.00 0.00 1.85
393 394 4.743644 GGTCTTTAGTCGCGCATATTTAGT 59.256 41.667 8.75 0.00 0.00 2.24
394 395 5.107951 GGTCTTTAGTCGCGCATATTTAGTC 60.108 44.000 8.75 0.00 0.00 2.59
395 396 4.980434 TCTTTAGTCGCGCATATTTAGTCC 59.020 41.667 8.75 0.00 0.00 3.85
396 397 2.150397 AGTCGCGCATATTTAGTCCC 57.850 50.000 8.75 0.00 0.00 4.46
397 398 0.782384 GTCGCGCATATTTAGTCCCG 59.218 55.000 8.75 0.00 0.00 5.14
398 399 0.319211 TCGCGCATATTTAGTCCCGG 60.319 55.000 8.75 0.00 0.00 5.73
399 400 0.599204 CGCGCATATTTAGTCCCGGT 60.599 55.000 8.75 0.00 0.00 5.28
400 401 1.589803 GCGCATATTTAGTCCCGGTT 58.410 50.000 0.30 0.00 0.00 4.44
401 402 1.263217 GCGCATATTTAGTCCCGGTTG 59.737 52.381 0.30 0.00 0.00 3.77
402 403 1.263217 CGCATATTTAGTCCCGGTTGC 59.737 52.381 0.00 0.00 0.00 4.17
403 404 2.294074 GCATATTTAGTCCCGGTTGCA 58.706 47.619 0.00 0.00 0.00 4.08
404 405 2.032924 GCATATTTAGTCCCGGTTGCAC 59.967 50.000 0.00 0.00 0.00 4.57
405 406 3.275143 CATATTTAGTCCCGGTTGCACA 58.725 45.455 0.00 0.00 0.00 4.57
406 407 1.821216 ATTTAGTCCCGGTTGCACAG 58.179 50.000 0.00 0.00 0.00 3.66
407 408 0.887387 TTTAGTCCCGGTTGCACAGC 60.887 55.000 0.00 0.00 0.00 4.40
408 409 2.741486 TTAGTCCCGGTTGCACAGCC 62.741 60.000 0.00 0.00 0.00 4.85
414 415 4.643387 GGTTGCACAGCCGGGACT 62.643 66.667 2.18 0.00 0.00 3.85
415 416 2.345991 GTTGCACAGCCGGGACTA 59.654 61.111 2.18 0.00 0.00 2.59
416 417 1.302192 GTTGCACAGCCGGGACTAA 60.302 57.895 2.18 0.00 0.00 2.24
417 418 0.887387 GTTGCACAGCCGGGACTAAA 60.887 55.000 2.18 0.00 0.00 1.85
418 419 0.605319 TTGCACAGCCGGGACTAAAG 60.605 55.000 2.18 0.00 0.00 1.85
419 420 1.745489 GCACAGCCGGGACTAAAGG 60.745 63.158 2.18 0.00 0.00 3.11
423 424 2.675371 GCCGGGACTAAAGGCCTT 59.325 61.111 13.78 13.78 44.80 4.35
424 425 1.001269 GCCGGGACTAAAGGCCTTT 60.001 57.895 32.37 32.37 44.80 3.11
425 426 1.313091 GCCGGGACTAAAGGCCTTTG 61.313 60.000 35.99 26.94 44.80 2.77
426 427 1.313091 CCGGGACTAAAGGCCTTTGC 61.313 60.000 35.99 24.64 34.23 3.68
427 428 1.644786 CGGGACTAAAGGCCTTTGCG 61.645 60.000 35.99 27.79 38.85 4.85
428 429 0.322187 GGGACTAAAGGCCTTTGCGA 60.322 55.000 35.99 18.65 38.85 5.10
429 430 1.530323 GGACTAAAGGCCTTTGCGAA 58.470 50.000 35.99 18.29 38.85 4.70
430 431 1.199327 GGACTAAAGGCCTTTGCGAAC 59.801 52.381 35.99 23.16 38.85 3.95
431 432 1.199327 GACTAAAGGCCTTTGCGAACC 59.801 52.381 35.99 17.08 38.85 3.62
432 433 0.168128 CTAAAGGCCTTTGCGAACCG 59.832 55.000 35.99 14.04 38.85 4.44
433 434 1.238625 TAAAGGCCTTTGCGAACCGG 61.239 55.000 35.99 0.00 38.85 5.28
436 437 3.733960 GCCTTTGCGAACCGGGAC 61.734 66.667 6.32 0.00 0.00 4.46
437 438 2.032071 CCTTTGCGAACCGGGACT 59.968 61.111 6.32 0.00 0.00 3.85
438 439 1.294138 CCTTTGCGAACCGGGACTA 59.706 57.895 6.32 0.00 0.00 2.59
439 440 0.320946 CCTTTGCGAACCGGGACTAA 60.321 55.000 6.32 0.00 0.00 2.24
440 441 1.515081 CTTTGCGAACCGGGACTAAA 58.485 50.000 6.32 0.00 0.00 1.85
441 442 1.463444 CTTTGCGAACCGGGACTAAAG 59.537 52.381 6.32 6.26 0.00 1.85
442 443 0.320946 TTGCGAACCGGGACTAAAGG 60.321 55.000 6.32 0.00 0.00 3.11
443 444 2.104859 GCGAACCGGGACTAAAGGC 61.105 63.158 6.32 0.00 0.00 4.35
444 445 1.449070 CGAACCGGGACTAAAGGCC 60.449 63.158 6.32 0.00 0.00 5.19
445 446 1.896122 CGAACCGGGACTAAAGGCCT 61.896 60.000 6.32 0.00 0.00 5.19
446 447 0.327259 GAACCGGGACTAAAGGCCTT 59.673 55.000 13.78 13.78 0.00 4.35
447 448 0.775542 AACCGGGACTAAAGGCCTTT 59.224 50.000 32.37 32.37 36.63 3.11
448 449 0.775542 ACCGGGACTAAAGGCCTTTT 59.224 50.000 34.60 19.07 34.23 2.27
449 450 1.146359 ACCGGGACTAAAGGCCTTTTT 59.854 47.619 34.60 22.14 34.23 1.94
467 468 2.450609 TTTCTACCAGTGAGAACCGC 57.549 50.000 0.00 0.00 32.68 5.68
468 469 1.629043 TTCTACCAGTGAGAACCGCT 58.371 50.000 0.00 0.00 35.67 5.52
472 473 2.345244 CAGTGAGAACCGCTGGCT 59.655 61.111 0.00 0.00 46.78 4.75
473 474 2.031516 CAGTGAGAACCGCTGGCTG 61.032 63.158 0.00 0.00 46.78 4.85
474 475 2.743928 GTGAGAACCGCTGGCTGG 60.744 66.667 0.00 2.90 0.00 4.85
475 476 3.241530 TGAGAACCGCTGGCTGGT 61.242 61.111 3.96 3.96 42.98 4.00
476 477 2.743928 GAGAACCGCTGGCTGGTG 60.744 66.667 9.10 0.00 40.35 4.17
477 478 3.240134 GAGAACCGCTGGCTGGTGA 62.240 63.158 9.10 0.00 40.35 4.02
478 479 2.045926 GAACCGCTGGCTGGTGAT 60.046 61.111 9.10 0.00 40.35 3.06
479 480 2.360350 AACCGCTGGCTGGTGATG 60.360 61.111 9.10 0.00 40.35 3.07
487 488 3.364441 GCTGGTGATGCGCCACAA 61.364 61.111 16.88 6.43 39.28 3.33
488 489 2.562912 CTGGTGATGCGCCACAAC 59.437 61.111 16.88 14.07 39.28 3.32
489 490 2.203266 TGGTGATGCGCCACAACA 60.203 55.556 15.69 15.69 39.28 3.33
490 491 1.588824 CTGGTGATGCGCCACAACAT 61.589 55.000 18.92 0.00 39.28 2.71
491 492 0.322008 TGGTGATGCGCCACAACATA 60.322 50.000 15.69 0.00 39.28 2.29
492 493 1.024271 GGTGATGCGCCACAACATAT 58.976 50.000 16.88 0.00 38.74 1.78
493 494 1.405105 GGTGATGCGCCACAACATATT 59.595 47.619 16.88 0.00 38.74 1.28
494 495 2.453080 GTGATGCGCCACAACATATTG 58.547 47.619 4.18 0.00 41.98 1.90
495 496 1.404748 TGATGCGCCACAACATATTGG 59.595 47.619 4.18 0.00 40.42 3.16
502 503 1.134729 CCACAACATATTGGCCAAGGC 60.135 52.381 24.94 1.52 40.42 4.35
667 674 1.380524 CTCCATCTCTCCACGTACGT 58.619 55.000 16.72 16.72 0.00 3.57
669 676 3.139850 CTCCATCTCTCCACGTACGTAT 58.860 50.000 22.34 6.95 0.00 3.06
743 793 1.060553 CACCACAAAATCGTCGATCGG 59.939 52.381 16.41 7.05 40.32 4.18
754 811 1.854227 GTCGATCGGGAAATGAGACC 58.146 55.000 16.41 0.00 0.00 3.85
886 960 1.530856 GGATAAAACCGCGCGAAAAG 58.469 50.000 34.63 17.54 0.00 2.27
1374 1619 3.065371 CCTCGATTGATACCAGCCAAAAC 59.935 47.826 0.00 0.00 0.00 2.43
1698 2100 7.706159 TGCTGCAATACCTAATTATGTTCTTG 58.294 34.615 0.00 5.48 0.00 3.02
1712 2115 3.321497 TGTTCTTGTTGTTTGTGTTGCC 58.679 40.909 0.00 0.00 0.00 4.52
1719 2122 0.106469 TGTTTGTGTTGCCCCTGCTA 60.106 50.000 0.00 0.00 38.71 3.49
1720 2123 1.256812 GTTTGTGTTGCCCCTGCTAT 58.743 50.000 0.00 0.00 38.71 2.97
1721 2124 2.224892 TGTTTGTGTTGCCCCTGCTATA 60.225 45.455 0.00 0.00 38.71 1.31
1734 2137 5.643777 GCCCCTGCTATATATTACAGTGTTG 59.356 44.000 0.00 0.58 33.53 3.33
1835 2238 7.642082 TCTCTTTCCCACTACTACTACAATC 57.358 40.000 0.00 0.00 0.00 2.67
2229 2656 8.570488 TGTATGTTAGGTTCATGGTATACTACG 58.430 37.037 2.25 0.00 0.00 3.51
2261 2697 5.779806 TTCAGTTAGAAAATGTAGAGCGC 57.220 39.130 0.00 0.00 32.05 5.92
2265 2701 5.348724 CAGTTAGAAAATGTAGAGCGCAGAA 59.651 40.000 11.47 0.00 0.00 3.02
2281 2717 3.280775 GCAGAACGAATTAATACAGCGC 58.719 45.455 0.00 0.00 0.00 5.92
2326 2769 8.196802 TCATTCTTCATTTATTGACACGTAGG 57.803 34.615 0.00 0.00 32.84 3.18
2330 2773 8.786826 TCTTCATTTATTGACACGTAGGATTT 57.213 30.769 0.00 0.00 32.84 2.17
2343 2786 4.010349 CGTAGGATTTTCTTCAGGCCTTT 58.990 43.478 0.00 0.00 0.00 3.11
2344 2787 4.459337 CGTAGGATTTTCTTCAGGCCTTTT 59.541 41.667 0.00 0.00 0.00 2.27
2345 2788 5.646360 CGTAGGATTTTCTTCAGGCCTTTTA 59.354 40.000 0.00 0.00 0.00 1.52
2346 2789 6.183360 CGTAGGATTTTCTTCAGGCCTTTTAG 60.183 42.308 0.00 0.00 0.00 1.85
2408 2855 9.783256 GGTGTAAATTAACTAAATAAGGTGCAG 57.217 33.333 0.00 0.00 0.00 4.41
2638 3839 0.743097 GATGGAAGCTGTGGCCATTC 59.257 55.000 9.72 8.71 42.22 2.67
2902 4111 5.463286 CACAACAGATACGCGGGTATATTA 58.537 41.667 23.34 0.00 39.44 0.98
3161 4515 2.286872 CAAATTGTGCTGGCCAAACAA 58.713 42.857 27.20 27.20 38.13 2.83
3162 4516 2.681848 CAAATTGTGCTGGCCAAACAAA 59.318 40.909 28.20 14.43 37.36 2.83
3163 4517 2.706339 ATTGTGCTGGCCAAACAAAA 57.294 40.000 28.20 20.94 37.36 2.44
3164 4518 1.731720 TTGTGCTGGCCAAACAAAAC 58.268 45.000 24.45 10.51 31.16 2.43
3165 4519 0.610174 TGTGCTGGCCAAACAAAACA 59.390 45.000 16.61 7.83 0.00 2.83
3166 4520 1.289276 GTGCTGGCCAAACAAAACAG 58.711 50.000 7.01 0.00 0.00 3.16
3267 4628 3.153919 GTGGTACCAAGGAATGCTTGAA 58.846 45.455 18.31 0.89 33.98 2.69
3463 4842 5.220931 GCAGACACATTTCTCTGAACAAGTT 60.221 40.000 0.00 0.00 36.75 2.66
3568 4948 3.996150 ATGCAACAAAGGTCTCACAAG 57.004 42.857 0.00 0.00 0.00 3.16
3575 4955 3.316308 ACAAAGGTCTCACAAGAACATGC 59.684 43.478 0.00 0.00 42.09 4.06
3652 5032 6.169800 GCTCTCACTCCCCATATCTAAAATC 58.830 44.000 0.00 0.00 0.00 2.17
3657 5037 4.658901 ACTCCCCATATCTAAAATCGGTGT 59.341 41.667 0.00 0.00 0.00 4.16
3676 5056 2.525248 CGTTGCCGATCCATCCACG 61.525 63.158 0.00 0.00 35.63 4.94
3714 5106 3.543665 ACAAACCTAAAGCGTACACCAA 58.456 40.909 0.00 0.00 0.00 3.67
3732 5124 3.004315 ACCAAATGCACACGTTTTAGAGG 59.996 43.478 0.00 0.00 32.57 3.69
3735 5127 1.225376 TGCACACGTTTTAGAGGCCG 61.225 55.000 0.00 0.00 0.00 6.13
3736 5128 1.495951 CACACGTTTTAGAGGCCGC 59.504 57.895 0.00 0.00 0.00 6.53
3740 5132 0.743345 ACGTTTTAGAGGCCGCCATC 60.743 55.000 13.15 6.47 0.00 3.51
3753 5145 1.595382 GCCATCATCCTCGAACCGG 60.595 63.158 0.00 0.00 0.00 5.28
3776 5168 4.080638 GTGACCCATCTTCAGGAAAGAGAT 60.081 45.833 0.00 0.00 46.95 2.75
3777 5169 4.163078 TGACCCATCTTCAGGAAAGAGATC 59.837 45.833 0.00 0.00 46.95 2.75
3778 5170 3.457749 ACCCATCTTCAGGAAAGAGATCC 59.542 47.826 0.00 0.00 46.95 3.36
3790 5182 4.262635 GGAAAGAGATCCGCATCATCCTTA 60.263 45.833 0.00 0.00 0.00 2.69
3791 5183 5.486526 GAAAGAGATCCGCATCATCCTTAT 58.513 41.667 0.00 0.00 0.00 1.73
3798 5190 2.037641 CCGCATCATCCTTATCAGTCCA 59.962 50.000 0.00 0.00 0.00 4.02
3806 5198 3.940335 TCCTTATCAGTCCATCCATCCA 58.060 45.455 0.00 0.00 0.00 3.41
3817 5209 2.383245 ATCCATCCATCGACGCCACC 62.383 60.000 0.00 0.00 0.00 4.61
3818 5210 2.186644 CATCCATCGACGCCACCA 59.813 61.111 0.00 0.00 0.00 4.17
3819 5211 2.173669 CATCCATCGACGCCACCAC 61.174 63.158 0.00 0.00 0.00 4.16
3821 5213 4.429212 CCATCGACGCCACCACGA 62.429 66.667 0.00 0.00 40.18 4.35
3843 5235 4.988598 CAACGGCACCACCTCGCT 62.989 66.667 0.00 0.00 35.61 4.93
3855 5247 2.127496 CTCGCTGCGTGCAAACTG 60.127 61.111 22.48 0.11 43.06 3.16
3856 5248 3.584250 CTCGCTGCGTGCAAACTGG 62.584 63.158 22.48 0.00 43.06 4.00
3858 5250 3.969802 GCTGCGTGCAAACTGGCT 61.970 61.111 0.00 0.00 42.31 4.75
3859 5251 2.253452 CTGCGTGCAAACTGGCTC 59.747 61.111 0.00 0.00 34.04 4.70
3860 5252 2.515757 TGCGTGCAAACTGGCTCA 60.516 55.556 0.00 0.00 34.04 4.26
3861 5253 2.253452 GCGTGCAAACTGGCTCAG 59.747 61.111 0.00 1.16 37.52 3.35
3862 5254 2.253758 GCGTGCAAACTGGCTCAGA 61.254 57.895 8.91 0.00 35.18 3.27
3863 5255 1.864862 CGTGCAAACTGGCTCAGAG 59.135 57.895 8.91 0.00 35.18 3.35
3864 5256 0.601046 CGTGCAAACTGGCTCAGAGA 60.601 55.000 0.00 0.00 35.18 3.10
3865 5257 1.597742 GTGCAAACTGGCTCAGAGAA 58.402 50.000 0.00 0.00 35.18 2.87
3866 5258 1.534595 GTGCAAACTGGCTCAGAGAAG 59.465 52.381 0.00 0.02 35.18 2.85
3867 5259 1.163554 GCAAACTGGCTCAGAGAAGG 58.836 55.000 0.00 0.00 35.18 3.46
3868 5260 1.163554 CAAACTGGCTCAGAGAAGGC 58.836 55.000 0.00 0.00 41.95 4.35
3869 5261 1.063183 AAACTGGCTCAGAGAAGGCT 58.937 50.000 0.00 0.00 42.10 4.58
3870 5262 0.324285 AACTGGCTCAGAGAAGGCTG 59.676 55.000 0.00 3.40 43.53 4.85
3871 5263 0.543883 ACTGGCTCAGAGAAGGCTGA 60.544 55.000 0.00 0.00 42.31 4.26
3872 5264 0.612229 CTGGCTCAGAGAAGGCTGAA 59.388 55.000 0.00 0.00 43.75 3.02
3873 5265 1.209990 CTGGCTCAGAGAAGGCTGAAT 59.790 52.381 0.00 0.00 43.75 2.57
3874 5266 1.209019 TGGCTCAGAGAAGGCTGAATC 59.791 52.381 0.00 0.00 43.75 2.52
3875 5267 1.474855 GGCTCAGAGAAGGCTGAATCC 60.475 57.143 0.00 0.00 43.75 3.01
3876 5268 1.805871 GCTCAGAGAAGGCTGAATCCG 60.806 57.143 0.00 0.00 43.75 4.18
3877 5269 1.480137 CTCAGAGAAGGCTGAATCCGT 59.520 52.381 0.00 0.00 43.75 4.69
3878 5270 1.478510 TCAGAGAAGGCTGAATCCGTC 59.521 52.381 0.00 0.00 41.65 4.79
3879 5271 0.457851 AGAGAAGGCTGAATCCGTCG 59.542 55.000 0.00 0.00 39.21 5.12
3880 5272 0.173708 GAGAAGGCTGAATCCGTCGT 59.826 55.000 0.00 0.00 39.21 4.34
3881 5273 0.608640 AGAAGGCTGAATCCGTCGTT 59.391 50.000 0.00 0.00 39.21 3.85
3882 5274 1.002087 AGAAGGCTGAATCCGTCGTTT 59.998 47.619 0.00 0.00 39.21 3.60
3883 5275 1.393883 GAAGGCTGAATCCGTCGTTTC 59.606 52.381 0.00 0.00 0.00 2.78
3884 5276 0.608640 AGGCTGAATCCGTCGTTTCT 59.391 50.000 0.00 0.00 0.00 2.52
3885 5277 1.000145 GGCTGAATCCGTCGTTTCTC 59.000 55.000 6.69 0.71 0.00 2.87
3886 5278 1.671850 GGCTGAATCCGTCGTTTCTCA 60.672 52.381 6.69 0.00 0.00 3.27
3887 5279 1.390463 GCTGAATCCGTCGTTTCTCAC 59.610 52.381 6.69 0.00 0.00 3.51
3888 5280 1.993370 CTGAATCCGTCGTTTCTCACC 59.007 52.381 6.69 0.00 0.00 4.02
3889 5281 1.341852 TGAATCCGTCGTTTCTCACCA 59.658 47.619 6.69 0.00 0.00 4.17
3890 5282 2.028476 TGAATCCGTCGTTTCTCACCAT 60.028 45.455 6.69 0.00 0.00 3.55
3891 5283 2.762535 ATCCGTCGTTTCTCACCATT 57.237 45.000 0.00 0.00 0.00 3.16
3892 5284 1.790755 TCCGTCGTTTCTCACCATTG 58.209 50.000 0.00 0.00 0.00 2.82
3893 5285 1.341852 TCCGTCGTTTCTCACCATTGA 59.658 47.619 0.00 0.00 0.00 2.57
3894 5286 1.459592 CCGTCGTTTCTCACCATTGAC 59.540 52.381 0.00 0.00 0.00 3.18
3895 5287 1.124297 CGTCGTTTCTCACCATTGACG 59.876 52.381 0.00 0.00 41.15 4.35
3896 5288 1.136336 GTCGTTTCTCACCATTGACGC 60.136 52.381 0.00 0.00 0.00 5.19
3897 5289 1.148310 CGTTTCTCACCATTGACGCT 58.852 50.000 0.00 0.00 0.00 5.07
3898 5290 2.029739 TCGTTTCTCACCATTGACGCTA 60.030 45.455 0.00 0.00 0.00 4.26
3899 5291 2.930040 CGTTTCTCACCATTGACGCTAT 59.070 45.455 0.00 0.00 0.00 2.97
3900 5292 4.109766 CGTTTCTCACCATTGACGCTATA 58.890 43.478 0.00 0.00 0.00 1.31
3901 5293 4.207224 CGTTTCTCACCATTGACGCTATAG 59.793 45.833 0.00 0.00 0.00 1.31
3902 5294 3.371102 TCTCACCATTGACGCTATAGC 57.629 47.619 15.09 15.09 37.78 2.97
3916 5308 2.416893 GCTATAGCGGAAAATAGCAGGC 59.583 50.000 9.40 0.00 46.41 4.85
3917 5309 2.938956 ATAGCGGAAAATAGCAGGCT 57.061 45.000 0.00 0.00 35.48 4.58
3918 5310 4.620803 GCTATAGCGGAAAATAGCAGGCTA 60.621 45.833 9.40 3.11 46.41 3.93
3919 5311 2.938956 AGCGGAAAATAGCAGGCTAT 57.061 45.000 7.96 7.96 40.63 2.97
3921 5313 2.880890 AGCGGAAAATAGCAGGCTATTG 59.119 45.455 23.09 13.64 45.37 1.90
3922 5314 2.030805 GCGGAAAATAGCAGGCTATTGG 60.031 50.000 23.09 14.99 45.37 3.16
3923 5315 2.030805 CGGAAAATAGCAGGCTATTGGC 60.031 50.000 23.09 17.77 45.37 4.52
3924 5316 2.030805 GGAAAATAGCAGGCTATTGGCG 60.031 50.000 23.09 0.00 45.37 5.69
3925 5317 2.348411 AAATAGCAGGCTATTGGCGT 57.652 45.000 23.09 8.33 45.37 5.68
3926 5318 1.884235 AATAGCAGGCTATTGGCGTC 58.116 50.000 22.07 0.00 44.68 5.19
3927 5319 0.319900 ATAGCAGGCTATTGGCGTCG 60.320 55.000 7.96 0.00 44.18 5.12
3928 5320 1.672854 TAGCAGGCTATTGGCGTCGT 61.673 55.000 0.00 0.00 44.18 4.34
3929 5321 2.106683 GCAGGCTATTGGCGTCGTT 61.107 57.895 0.00 0.00 44.18 3.85
3930 5322 1.715585 CAGGCTATTGGCGTCGTTG 59.284 57.895 0.00 0.00 44.18 4.10
3931 5323 1.019278 CAGGCTATTGGCGTCGTTGT 61.019 55.000 0.00 0.00 44.18 3.32
3932 5324 0.739813 AGGCTATTGGCGTCGTTGTC 60.740 55.000 0.00 0.00 44.18 3.18
3933 5325 1.017177 GGCTATTGGCGTCGTTGTCA 61.017 55.000 0.00 0.00 42.94 3.58
3934 5326 0.793861 GCTATTGGCGTCGTTGTCAA 59.206 50.000 0.00 0.00 37.93 3.18
3935 5327 1.396996 GCTATTGGCGTCGTTGTCAAT 59.603 47.619 12.58 12.58 45.51 2.57
3936 5328 2.159572 GCTATTGGCGTCGTTGTCAATT 60.160 45.455 13.06 1.40 41.14 2.32
3937 5329 3.669557 GCTATTGGCGTCGTTGTCAATTT 60.670 43.478 13.06 0.00 41.14 1.82
3938 5330 2.853731 TTGGCGTCGTTGTCAATTTT 57.146 40.000 0.00 0.00 0.00 1.82
3939 5331 2.853731 TGGCGTCGTTGTCAATTTTT 57.146 40.000 0.00 0.00 0.00 1.94
3960 5352 4.718940 TTTGCCAGAAAATAGCCTAAGC 57.281 40.909 0.00 0.00 40.32 3.09
3971 5363 3.569873 GCCTAAGCTTGCCACCTAA 57.430 52.632 9.86 0.00 35.50 2.69
3972 5364 2.058593 GCCTAAGCTTGCCACCTAAT 57.941 50.000 9.86 0.00 35.50 1.73
3973 5365 1.678101 GCCTAAGCTTGCCACCTAATG 59.322 52.381 9.86 0.00 35.50 1.90
3974 5366 2.945890 GCCTAAGCTTGCCACCTAATGT 60.946 50.000 9.86 0.00 35.50 2.71
3975 5367 2.945668 CCTAAGCTTGCCACCTAATGTC 59.054 50.000 9.86 0.00 0.00 3.06
3976 5368 2.584835 AAGCTTGCCACCTAATGTCA 57.415 45.000 0.00 0.00 0.00 3.58
3977 5369 2.584835 AGCTTGCCACCTAATGTCAA 57.415 45.000 0.00 0.00 0.00 3.18
3978 5370 2.162681 AGCTTGCCACCTAATGTCAAC 58.837 47.619 0.00 0.00 0.00 3.18
3979 5371 2.162681 GCTTGCCACCTAATGTCAACT 58.837 47.619 0.00 0.00 0.00 3.16
3980 5372 2.095059 GCTTGCCACCTAATGTCAACTG 60.095 50.000 0.00 0.00 0.00 3.16
3981 5373 2.949177 TGCCACCTAATGTCAACTGT 57.051 45.000 0.00 0.00 0.00 3.55
3982 5374 4.323417 CTTGCCACCTAATGTCAACTGTA 58.677 43.478 0.00 0.00 0.00 2.74
3983 5375 3.937814 TGCCACCTAATGTCAACTGTAG 58.062 45.455 0.00 0.00 0.00 2.74
3984 5376 3.326588 TGCCACCTAATGTCAACTGTAGT 59.673 43.478 0.00 0.00 0.00 2.73
3985 5377 4.202419 TGCCACCTAATGTCAACTGTAGTT 60.202 41.667 0.00 0.00 39.12 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 9.761504 TGCATATGAAATTTCAAACAAGAAGAA 57.238 25.926 23.91 1.93 41.13 2.52
41 42 9.932207 ATGCATATGAAATTTCAAACAAGAAGA 57.068 25.926 23.91 4.00 41.13 2.87
42 43 9.967245 CATGCATATGAAATTTCAAACAAGAAG 57.033 29.630 23.91 9.77 41.13 2.85
43 44 9.491675 ACATGCATATGAAATTTCAAACAAGAA 57.508 25.926 23.91 8.45 41.13 2.52
58 59 9.555727 TCTACGCTACTATATACATGCATATGA 57.444 33.333 6.97 0.00 37.73 2.15
71 72 9.933723 TCAGTACACATATTCTACGCTACTATA 57.066 33.333 0.00 0.00 0.00 1.31
72 73 8.843885 TCAGTACACATATTCTACGCTACTAT 57.156 34.615 0.00 0.00 0.00 2.12
73 74 8.667076 TTCAGTACACATATTCTACGCTACTA 57.333 34.615 0.00 0.00 0.00 1.82
74 75 7.563888 TTCAGTACACATATTCTACGCTACT 57.436 36.000 0.00 0.00 0.00 2.57
75 76 7.914346 AGTTTCAGTACACATATTCTACGCTAC 59.086 37.037 0.00 0.00 0.00 3.58
76 77 7.993101 AGTTTCAGTACACATATTCTACGCTA 58.007 34.615 0.00 0.00 0.00 4.26
77 78 6.864342 AGTTTCAGTACACATATTCTACGCT 58.136 36.000 0.00 0.00 0.00 5.07
78 79 7.274904 TGAAGTTTCAGTACACATATTCTACGC 59.725 37.037 0.00 0.00 32.50 4.42
79 80 8.683550 TGAAGTTTCAGTACACATATTCTACG 57.316 34.615 0.00 0.00 32.50 3.51
82 83 9.725019 TTGATGAAGTTTCAGTACACATATTCT 57.275 29.630 0.00 0.00 41.08 2.40
87 88 8.849168 TGATTTTGATGAAGTTTCAGTACACAT 58.151 29.630 0.00 0.00 41.08 3.21
88 89 8.219546 TGATTTTGATGAAGTTTCAGTACACA 57.780 30.769 0.00 0.00 41.08 3.72
89 90 9.515020 TTTGATTTTGATGAAGTTTCAGTACAC 57.485 29.630 0.00 0.00 41.08 2.90
148 149 9.594478 CCTGGTTTCTTTTTAATTTGTAGTGTT 57.406 29.630 0.00 0.00 0.00 3.32
149 150 8.755028 ACCTGGTTTCTTTTTAATTTGTAGTGT 58.245 29.630 0.00 0.00 0.00 3.55
150 151 9.594478 AACCTGGTTTCTTTTTAATTTGTAGTG 57.406 29.630 6.18 0.00 0.00 2.74
154 155 9.607988 CCTAAACCTGGTTTCTTTTTAATTTGT 57.392 29.630 26.95 2.11 37.01 2.83
155 156 9.051679 CCCTAAACCTGGTTTCTTTTTAATTTG 57.948 33.333 26.95 2.02 37.01 2.32
156 157 8.215050 CCCCTAAACCTGGTTTCTTTTTAATTT 58.785 33.333 26.95 2.76 37.01 1.82
157 158 7.202149 CCCCCTAAACCTGGTTTCTTTTTAATT 60.202 37.037 26.95 3.28 37.01 1.40
158 159 6.271391 CCCCCTAAACCTGGTTTCTTTTTAAT 59.729 38.462 26.95 4.03 37.01 1.40
159 160 5.603395 CCCCCTAAACCTGGTTTCTTTTTAA 59.397 40.000 26.95 8.17 37.01 1.52
160 161 5.149239 CCCCCTAAACCTGGTTTCTTTTTA 58.851 41.667 26.95 8.87 37.01 1.52
161 162 3.971305 CCCCCTAAACCTGGTTTCTTTTT 59.029 43.478 26.95 6.26 37.01 1.94
162 163 3.583228 CCCCCTAAACCTGGTTTCTTTT 58.417 45.455 26.95 7.01 37.01 2.27
163 164 3.254093 CCCCCTAAACCTGGTTTCTTT 57.746 47.619 26.95 7.40 37.01 2.52
164 165 2.992847 CCCCCTAAACCTGGTTTCTT 57.007 50.000 26.95 7.77 37.01 2.52
183 184 1.471287 CGCAGGTTTAGGGTTTTAGCC 59.529 52.381 0.00 0.00 35.59 3.93
184 185 2.913777 CGCAGGTTTAGGGTTTTAGC 57.086 50.000 0.00 0.00 0.00 3.09
199 200 1.144936 CTAAAGGCCTCCTCCGCAG 59.855 63.158 5.23 0.00 30.89 5.18
200 201 1.612442 ACTAAAGGCCTCCTCCGCA 60.612 57.895 5.23 0.00 30.89 5.69
201 202 1.144276 GACTAAAGGCCTCCTCCGC 59.856 63.158 5.23 0.00 30.89 5.54
202 203 1.687297 GGGACTAAAGGCCTCCTCCG 61.687 65.000 5.23 0.00 30.89 4.63
203 204 1.687297 CGGGACTAAAGGCCTCCTCC 61.687 65.000 5.23 7.60 30.89 4.30
204 205 1.687297 CCGGGACTAAAGGCCTCCTC 61.687 65.000 5.23 0.00 30.89 3.71
205 206 1.689582 CCGGGACTAAAGGCCTCCT 60.690 63.158 5.23 0.00 33.87 3.69
206 207 1.559965 AACCGGGACTAAAGGCCTCC 61.560 60.000 5.23 1.56 0.00 4.30
207 208 1.138464 CTAACCGGGACTAAAGGCCTC 59.862 57.143 5.23 0.00 0.00 4.70
208 209 1.201424 CTAACCGGGACTAAAGGCCT 58.799 55.000 6.32 0.00 0.00 5.19
209 210 0.463295 GCTAACCGGGACTAAAGGCC 60.463 60.000 6.32 0.00 0.00 5.19
210 211 0.463295 GGCTAACCGGGACTAAAGGC 60.463 60.000 6.32 1.99 0.00 4.35
211 212 0.906775 TGGCTAACCGGGACTAAAGG 59.093 55.000 6.32 0.00 39.70 3.11
212 213 1.738030 CGTGGCTAACCGGGACTAAAG 60.738 57.143 6.32 0.00 39.70 1.85
213 214 0.247185 CGTGGCTAACCGGGACTAAA 59.753 55.000 6.32 0.00 39.70 1.85
214 215 0.611618 TCGTGGCTAACCGGGACTAA 60.612 55.000 6.32 0.00 39.70 2.24
215 216 1.001020 TCGTGGCTAACCGGGACTA 60.001 57.895 6.32 0.00 39.70 2.59
216 217 2.283388 TCGTGGCTAACCGGGACT 60.283 61.111 6.32 0.00 39.70 3.85
217 218 1.880819 TTCTCGTGGCTAACCGGGAC 61.881 60.000 6.32 0.00 39.70 4.46
218 219 0.974010 ATTCTCGTGGCTAACCGGGA 60.974 55.000 6.32 0.00 39.70 5.14
219 220 0.529992 GATTCTCGTGGCTAACCGGG 60.530 60.000 6.32 0.00 39.70 5.73
220 221 0.870307 CGATTCTCGTGGCTAACCGG 60.870 60.000 0.00 0.00 39.70 5.28
221 222 0.870307 CCGATTCTCGTGGCTAACCG 60.870 60.000 0.00 0.00 38.40 4.44
222 223 0.529992 CCCGATTCTCGTGGCTAACC 60.530 60.000 0.00 0.00 38.40 2.85
223 224 0.458669 TCCCGATTCTCGTGGCTAAC 59.541 55.000 0.00 0.00 38.40 2.34
224 225 0.458669 GTCCCGATTCTCGTGGCTAA 59.541 55.000 0.00 0.00 38.40 3.09
225 226 0.395311 AGTCCCGATTCTCGTGGCTA 60.395 55.000 0.00 0.00 38.40 3.93
226 227 0.395311 TAGTCCCGATTCTCGTGGCT 60.395 55.000 0.00 0.00 38.40 4.75
227 228 0.458669 TTAGTCCCGATTCTCGTGGC 59.541 55.000 0.00 0.00 38.40 5.01
228 229 2.481449 CCTTTAGTCCCGATTCTCGTGG 60.481 54.545 0.00 0.00 38.40 4.94
229 230 2.165845 ACCTTTAGTCCCGATTCTCGTG 59.834 50.000 0.00 0.00 38.40 4.35
230 231 2.426381 GACCTTTAGTCCCGATTCTCGT 59.574 50.000 0.00 0.00 39.84 4.18
231 232 3.081329 GACCTTTAGTCCCGATTCTCG 57.919 52.381 0.00 0.00 39.84 4.04
241 242 0.460722 GGAGCGGAGGACCTTTAGTC 59.539 60.000 0.00 0.00 45.51 2.59
242 243 1.321074 CGGAGCGGAGGACCTTTAGT 61.321 60.000 0.00 0.00 0.00 2.24
243 244 1.035932 TCGGAGCGGAGGACCTTTAG 61.036 60.000 0.00 0.00 0.00 1.85
244 245 1.000521 TCGGAGCGGAGGACCTTTA 60.001 57.895 0.00 0.00 0.00 1.85
245 246 2.283676 TCGGAGCGGAGGACCTTT 60.284 61.111 0.00 0.00 0.00 3.11
246 247 3.069318 GTCGGAGCGGAGGACCTT 61.069 66.667 0.00 0.00 0.00 3.50
276 277 1.818959 TAAAGGACCGTCCACGTGGG 61.819 60.000 33.40 20.25 39.61 4.61
277 278 0.389426 CTAAAGGACCGTCCACGTGG 60.389 60.000 29.26 29.26 39.61 4.94
278 279 0.316204 ACTAAAGGACCGTCCACGTG 59.684 55.000 19.95 9.08 39.61 4.49
279 280 0.600057 GACTAAAGGACCGTCCACGT 59.400 55.000 19.95 10.03 39.61 4.49
280 281 0.108945 GGACTAAAGGACCGTCCACG 60.109 60.000 19.95 7.04 45.08 4.94
281 282 3.828657 GGACTAAAGGACCGTCCAC 57.171 57.895 19.95 3.86 45.08 4.02
283 284 1.514553 CGGGACTAAAGGACCGTCC 59.485 63.158 9.81 9.81 45.02 4.79
284 285 1.253593 ACCGGGACTAAAGGACCGTC 61.254 60.000 6.32 0.00 44.57 4.79
285 286 0.833409 AACCGGGACTAAAGGACCGT 60.833 55.000 6.32 0.00 44.57 4.83
286 287 1.135721 CTAACCGGGACTAAAGGACCG 59.864 57.143 6.32 7.41 45.57 4.79
287 288 1.134580 GCTAACCGGGACTAAAGGACC 60.135 57.143 6.32 0.00 0.00 4.46
288 289 1.134580 GGCTAACCGGGACTAAAGGAC 60.135 57.143 6.32 0.00 0.00 3.85
289 290 1.197812 GGCTAACCGGGACTAAAGGA 58.802 55.000 6.32 0.00 0.00 3.36
290 291 0.906775 TGGCTAACCGGGACTAAAGG 59.093 55.000 6.32 0.00 39.70 3.11
291 292 1.738030 CGTGGCTAACCGGGACTAAAG 60.738 57.143 6.32 0.00 39.70 1.85
292 293 0.247185 CGTGGCTAACCGGGACTAAA 59.753 55.000 6.32 0.00 39.70 1.85
293 294 0.611618 TCGTGGCTAACCGGGACTAA 60.612 55.000 6.32 0.00 39.70 2.24
294 295 1.001020 TCGTGGCTAACCGGGACTA 60.001 57.895 6.32 0.00 39.70 2.59
295 296 2.283388 TCGTGGCTAACCGGGACT 60.283 61.111 6.32 0.00 39.70 3.85
296 297 1.880819 TTCTCGTGGCTAACCGGGAC 61.881 60.000 6.32 0.00 39.70 4.46
297 298 1.607178 TTCTCGTGGCTAACCGGGA 60.607 57.895 6.32 0.00 39.70 5.14
298 299 1.447314 GTTCTCGTGGCTAACCGGG 60.447 63.158 6.32 0.00 39.70 5.73
299 300 1.447314 GGTTCTCGTGGCTAACCGG 60.447 63.158 0.00 0.00 39.70 5.28
300 301 4.180496 GGTTCTCGTGGCTAACCG 57.820 61.111 0.00 0.00 39.70 4.44
301 302 1.447314 CCGGTTCTCGTGGCTAACC 60.447 63.158 0.00 0.00 39.44 2.85
302 303 1.447314 CCCGGTTCTCGTGGCTAAC 60.447 63.158 0.00 0.00 37.11 2.34
303 304 1.607178 TCCCGGTTCTCGTGGCTAA 60.607 57.895 0.00 0.00 37.11 3.09
304 305 2.036098 TCCCGGTTCTCGTGGCTA 59.964 61.111 0.00 0.00 37.11 3.93
305 306 2.776370 TAGTCCCGGTTCTCGTGGCT 62.776 60.000 0.00 0.00 37.11 4.75
306 307 1.880819 TTAGTCCCGGTTCTCGTGGC 61.881 60.000 0.00 0.00 37.11 5.01
307 308 0.604578 TTTAGTCCCGGTTCTCGTGG 59.395 55.000 0.00 0.00 37.11 4.94
308 309 1.992170 CTTTAGTCCCGGTTCTCGTG 58.008 55.000 0.00 0.00 37.11 4.35
309 310 0.245813 GCTTTAGTCCCGGTTCTCGT 59.754 55.000 0.00 0.00 37.11 4.18
310 311 0.459759 GGCTTTAGTCCCGGTTCTCG 60.460 60.000 0.00 0.00 38.88 4.04
311 312 0.903236 AGGCTTTAGTCCCGGTTCTC 59.097 55.000 0.00 0.00 0.00 2.87
312 313 1.359168 AAGGCTTTAGTCCCGGTTCT 58.641 50.000 0.00 0.15 0.00 3.01
313 314 2.195741 AAAGGCTTTAGTCCCGGTTC 57.804 50.000 11.52 0.00 0.00 3.62
314 315 3.345508 CTAAAGGCTTTAGTCCCGGTT 57.654 47.619 30.21 2.75 38.21 4.44
322 323 2.005971 ACCGCGACTAAAGGCTTTAG 57.994 50.000 34.37 34.37 46.26 1.85
323 324 2.340337 GAACCGCGACTAAAGGCTTTA 58.660 47.619 18.11 18.11 0.00 1.85
324 325 1.154197 GAACCGCGACTAAAGGCTTT 58.846 50.000 17.76 17.76 0.00 3.51
325 326 1.012486 CGAACCGCGACTAAAGGCTT 61.012 55.000 8.23 0.00 44.57 4.35
326 327 1.445582 CGAACCGCGACTAAAGGCT 60.446 57.895 8.23 0.00 44.57 4.58
327 328 0.456653 TACGAACCGCGACTAAAGGC 60.457 55.000 8.23 0.00 44.57 4.35
328 329 1.916000 CTTACGAACCGCGACTAAAGG 59.084 52.381 8.23 0.00 44.57 3.11
329 330 2.844804 CTCTTACGAACCGCGACTAAAG 59.155 50.000 8.23 3.58 44.57 1.85
330 331 2.414559 CCTCTTACGAACCGCGACTAAA 60.415 50.000 8.23 0.00 44.57 1.85
331 332 1.131126 CCTCTTACGAACCGCGACTAA 59.869 52.381 8.23 0.00 44.57 2.24
332 333 0.729116 CCTCTTACGAACCGCGACTA 59.271 55.000 8.23 0.00 44.57 2.59
333 334 1.505353 CCTCTTACGAACCGCGACT 59.495 57.895 8.23 0.00 44.57 4.18
334 335 2.157073 GCCTCTTACGAACCGCGAC 61.157 63.158 8.23 0.00 44.57 5.19
335 336 2.180017 GCCTCTTACGAACCGCGA 59.820 61.111 8.23 0.00 44.57 5.87
337 338 3.551915 GCGCCTCTTACGAACCGC 61.552 66.667 0.00 0.00 33.61 5.68
338 339 3.245315 CGCGCCTCTTACGAACCG 61.245 66.667 0.00 0.00 0.00 4.44
339 340 2.157073 GTCGCGCCTCTTACGAACC 61.157 63.158 0.00 0.00 37.60 3.62
340 341 0.097674 TAGTCGCGCCTCTTACGAAC 59.902 55.000 0.00 0.00 37.60 3.95
341 342 0.804364 TTAGTCGCGCCTCTTACGAA 59.196 50.000 0.00 0.00 37.60 3.85
342 343 0.376152 CTTAGTCGCGCCTCTTACGA 59.624 55.000 0.00 0.00 0.00 3.43
343 344 0.591741 CCTTAGTCGCGCCTCTTACG 60.592 60.000 0.00 0.00 0.00 3.18
344 345 0.248949 CCCTTAGTCGCGCCTCTTAC 60.249 60.000 0.00 0.00 0.00 2.34
345 346 1.389609 CCCCTTAGTCGCGCCTCTTA 61.390 60.000 0.00 0.00 0.00 2.10
346 347 2.722201 CCCCTTAGTCGCGCCTCTT 61.722 63.158 0.00 0.00 0.00 2.85
347 348 3.148279 CCCCTTAGTCGCGCCTCT 61.148 66.667 0.00 2.63 0.00 3.69
348 349 3.140225 CTCCCCTTAGTCGCGCCTC 62.140 68.421 0.00 0.00 0.00 4.70
349 350 3.148279 CTCCCCTTAGTCGCGCCT 61.148 66.667 0.00 0.00 0.00 5.52
350 351 4.222847 CCTCCCCTTAGTCGCGCC 62.223 72.222 0.00 0.00 0.00 6.53
351 352 4.222847 CCCTCCCCTTAGTCGCGC 62.223 72.222 0.00 0.00 0.00 6.86
352 353 3.537874 CCCCTCCCCTTAGTCGCG 61.538 72.222 0.00 0.00 0.00 5.87
353 354 3.162154 CCCCCTCCCCTTAGTCGC 61.162 72.222 0.00 0.00 0.00 5.19
367 368 2.510918 GCGCGACTAAAGACCCCC 60.511 66.667 12.10 0.00 0.00 5.40
368 369 0.103572 TATGCGCGACTAAAGACCCC 59.896 55.000 12.10 0.00 0.00 4.95
369 370 2.150397 ATATGCGCGACTAAAGACCC 57.850 50.000 12.10 0.00 0.00 4.46
370 371 4.743644 ACTAAATATGCGCGACTAAAGACC 59.256 41.667 12.10 0.00 0.00 3.85
371 372 5.107951 GGACTAAATATGCGCGACTAAAGAC 60.108 44.000 12.10 0.00 0.00 3.01
372 373 4.980434 GGACTAAATATGCGCGACTAAAGA 59.020 41.667 12.10 0.00 0.00 2.52
373 374 4.150098 GGGACTAAATATGCGCGACTAAAG 59.850 45.833 12.10 0.00 0.00 1.85
374 375 4.053295 GGGACTAAATATGCGCGACTAAA 58.947 43.478 12.10 0.00 0.00 1.85
375 376 3.645884 GGGACTAAATATGCGCGACTAA 58.354 45.455 12.10 0.00 0.00 2.24
376 377 2.351060 CGGGACTAAATATGCGCGACTA 60.351 50.000 12.10 0.00 38.72 2.59
377 378 1.602165 CGGGACTAAATATGCGCGACT 60.602 52.381 12.10 0.00 38.72 4.18
378 379 0.782384 CGGGACTAAATATGCGCGAC 59.218 55.000 12.10 0.88 38.72 5.19
379 380 0.319211 CCGGGACTAAATATGCGCGA 60.319 55.000 12.10 0.00 38.72 5.87
380 381 0.599204 ACCGGGACTAAATATGCGCG 60.599 55.000 6.32 0.00 36.61 6.86
381 382 1.263217 CAACCGGGACTAAATATGCGC 59.737 52.381 6.32 0.00 0.00 6.09
382 383 1.263217 GCAACCGGGACTAAATATGCG 59.737 52.381 6.32 0.00 0.00 4.73
383 384 2.032924 GTGCAACCGGGACTAAATATGC 59.967 50.000 6.32 2.60 34.56 3.14
384 385 3.275143 TGTGCAACCGGGACTAAATATG 58.725 45.455 6.32 0.00 38.87 1.78
385 386 3.541632 CTGTGCAACCGGGACTAAATAT 58.458 45.455 6.32 0.00 38.87 1.28
386 387 2.937873 GCTGTGCAACCGGGACTAAATA 60.938 50.000 6.32 0.00 38.87 1.40
387 388 1.821216 CTGTGCAACCGGGACTAAAT 58.179 50.000 6.32 0.00 38.87 1.40
388 389 0.887387 GCTGTGCAACCGGGACTAAA 60.887 55.000 6.32 0.00 38.87 1.85
389 390 1.302192 GCTGTGCAACCGGGACTAA 60.302 57.895 6.32 0.00 38.87 2.24
390 391 2.345991 GCTGTGCAACCGGGACTA 59.654 61.111 6.32 0.00 38.87 2.59
391 392 4.643387 GGCTGTGCAACCGGGACT 62.643 66.667 6.32 0.00 38.87 3.85
397 398 2.741486 TTAGTCCCGGCTGTGCAACC 62.741 60.000 0.00 0.00 34.36 3.77
398 399 0.887387 TTTAGTCCCGGCTGTGCAAC 60.887 55.000 0.00 0.00 37.35 4.17
399 400 0.605319 CTTTAGTCCCGGCTGTGCAA 60.605 55.000 0.00 0.00 0.00 4.08
400 401 1.003839 CTTTAGTCCCGGCTGTGCA 60.004 57.895 0.00 0.00 0.00 4.57
401 402 1.745489 CCTTTAGTCCCGGCTGTGC 60.745 63.158 0.00 0.00 0.00 4.57
402 403 1.745489 GCCTTTAGTCCCGGCTGTG 60.745 63.158 0.00 0.00 40.62 3.66
403 404 2.669240 GCCTTTAGTCCCGGCTGT 59.331 61.111 0.00 0.00 40.62 4.40
404 405 2.124695 GGCCTTTAGTCCCGGCTG 60.125 66.667 0.00 0.00 43.29 4.85
405 406 1.498176 AAAGGCCTTTAGTCCCGGCT 61.498 55.000 29.47 0.30 43.29 5.52
406 407 1.001269 AAAGGCCTTTAGTCCCGGC 60.001 57.895 29.47 0.00 43.03 6.13
407 408 1.313091 GCAAAGGCCTTTAGTCCCGG 61.313 60.000 29.94 16.67 0.00 5.73
408 409 1.644786 CGCAAAGGCCTTTAGTCCCG 61.645 60.000 29.94 21.01 36.38 5.14
409 410 0.322187 TCGCAAAGGCCTTTAGTCCC 60.322 55.000 29.94 14.43 36.38 4.46
410 411 1.199327 GTTCGCAAAGGCCTTTAGTCC 59.801 52.381 29.94 16.69 36.38 3.85
411 412 1.199327 GGTTCGCAAAGGCCTTTAGTC 59.801 52.381 29.94 19.52 36.38 2.59
412 413 1.244816 GGTTCGCAAAGGCCTTTAGT 58.755 50.000 29.94 6.35 36.38 2.24
413 414 0.168128 CGGTTCGCAAAGGCCTTTAG 59.832 55.000 29.94 24.65 36.38 1.85
414 415 1.238625 CCGGTTCGCAAAGGCCTTTA 61.239 55.000 29.94 12.86 36.38 1.85
415 416 2.561037 CCGGTTCGCAAAGGCCTTT 61.561 57.895 25.47 25.47 36.38 3.11
416 417 2.983592 CCGGTTCGCAAAGGCCTT 60.984 61.111 13.78 13.78 36.38 4.35
419 420 2.791501 TAGTCCCGGTTCGCAAAGGC 62.792 60.000 0.00 0.00 0.00 4.35
420 421 0.320946 TTAGTCCCGGTTCGCAAAGG 60.321 55.000 0.00 0.00 0.00 3.11
421 422 1.463444 CTTTAGTCCCGGTTCGCAAAG 59.537 52.381 0.00 5.06 0.00 2.77
422 423 1.515081 CTTTAGTCCCGGTTCGCAAA 58.485 50.000 0.00 0.00 0.00 3.68
423 424 0.320946 CCTTTAGTCCCGGTTCGCAA 60.321 55.000 0.00 0.00 0.00 4.85
424 425 1.294138 CCTTTAGTCCCGGTTCGCA 59.706 57.895 0.00 0.00 0.00 5.10
425 426 2.104859 GCCTTTAGTCCCGGTTCGC 61.105 63.158 0.00 0.00 0.00 4.70
426 427 1.449070 GGCCTTTAGTCCCGGTTCG 60.449 63.158 0.00 0.00 0.00 3.95
427 428 0.327259 AAGGCCTTTAGTCCCGGTTC 59.673 55.000 13.78 0.00 0.00 3.62
428 429 0.775542 AAAGGCCTTTAGTCCCGGTT 59.224 50.000 29.47 0.30 0.00 4.44
429 430 0.775542 AAAAGGCCTTTAGTCCCGGT 59.224 50.000 30.59 10.08 31.63 5.28
430 431 1.919240 AAAAAGGCCTTTAGTCCCGG 58.081 50.000 30.59 0.00 31.63 5.73
446 447 3.135994 GCGGTTCTCACTGGTAGAAAAA 58.864 45.455 0.00 0.00 34.86 1.94
447 448 2.367567 AGCGGTTCTCACTGGTAGAAAA 59.632 45.455 0.00 0.00 38.29 2.29
448 449 1.968493 AGCGGTTCTCACTGGTAGAAA 59.032 47.619 0.00 0.00 38.29 2.52
449 450 1.272490 CAGCGGTTCTCACTGGTAGAA 59.728 52.381 0.00 0.00 37.97 2.10
450 451 0.888619 CAGCGGTTCTCACTGGTAGA 59.111 55.000 0.00 0.00 37.97 2.59
451 452 0.108615 CCAGCGGTTCTCACTGGTAG 60.109 60.000 0.00 0.00 44.91 3.18
452 453 1.972198 CCAGCGGTTCTCACTGGTA 59.028 57.895 0.00 0.00 44.91 3.25
453 454 2.743718 CCAGCGGTTCTCACTGGT 59.256 61.111 0.00 0.00 44.91 4.00
455 456 2.031516 CAGCCAGCGGTTCTCACTG 61.032 63.158 0.00 0.00 0.00 3.66
456 457 2.345244 CAGCCAGCGGTTCTCACT 59.655 61.111 0.00 0.00 0.00 3.41
457 458 2.743928 CCAGCCAGCGGTTCTCAC 60.744 66.667 0.00 0.00 0.00 3.51
458 459 3.241530 ACCAGCCAGCGGTTCTCA 61.242 61.111 1.15 0.00 30.53 3.27
459 460 2.527951 ATCACCAGCCAGCGGTTCTC 62.528 60.000 3.86 0.00 33.25 2.87
460 461 2.596851 ATCACCAGCCAGCGGTTCT 61.597 57.895 3.86 0.00 33.25 3.01
461 462 2.045926 ATCACCAGCCAGCGGTTC 60.046 61.111 3.86 0.00 33.25 3.62
462 463 2.360350 CATCACCAGCCAGCGGTT 60.360 61.111 3.86 0.00 33.25 4.44
470 471 3.364441 TTGTGGCGCATCACCAGC 61.364 61.111 10.83 0.00 38.04 4.85
471 472 1.588824 ATGTTGTGGCGCATCACCAG 61.589 55.000 10.83 0.00 38.04 4.00
472 473 0.322008 TATGTTGTGGCGCATCACCA 60.322 50.000 10.83 6.75 36.87 4.17
473 474 1.024271 ATATGTTGTGGCGCATCACC 58.976 50.000 10.83 0.10 36.87 4.02
474 475 2.453080 CAATATGTTGTGGCGCATCAC 58.547 47.619 10.83 10.06 38.09 3.06
475 476 1.404748 CCAATATGTTGTGGCGCATCA 59.595 47.619 10.83 13.61 33.36 3.07
476 477 2.124011 CCAATATGTTGTGGCGCATC 57.876 50.000 10.83 1.11 33.36 3.91
482 483 1.134729 GCCTTGGCCAATATGTTGTGG 60.135 52.381 20.85 15.03 38.00 4.17
483 484 1.134729 GGCCTTGGCCAATATGTTGTG 60.135 52.381 24.50 4.20 33.36 3.33
484 485 1.194218 GGCCTTGGCCAATATGTTGT 58.806 50.000 24.50 0.00 33.36 3.32
485 486 1.410153 GAGGCCTTGGCCAATATGTTG 59.590 52.381 29.79 5.84 35.05 3.33
486 487 1.288932 AGAGGCCTTGGCCAATATGTT 59.711 47.619 29.79 9.61 0.00 2.71
487 488 0.929244 AGAGGCCTTGGCCAATATGT 59.071 50.000 29.79 10.34 0.00 2.29
488 489 1.144503 AGAGAGGCCTTGGCCAATATG 59.855 52.381 29.79 11.89 0.00 1.78
489 490 1.423161 GAGAGAGGCCTTGGCCAATAT 59.577 52.381 29.79 16.23 0.00 1.28
490 491 0.839946 GAGAGAGGCCTTGGCCAATA 59.160 55.000 29.79 0.00 0.00 1.90
491 492 0.918310 AGAGAGAGGCCTTGGCCAAT 60.918 55.000 29.79 18.65 0.00 3.16
492 493 1.539869 AGAGAGAGGCCTTGGCCAA 60.540 57.895 29.79 19.25 0.00 4.52
493 494 1.992277 GAGAGAGAGGCCTTGGCCA 60.992 63.158 29.79 0.00 0.00 5.36
494 495 1.271127 AAGAGAGAGAGGCCTTGGCC 61.271 60.000 22.29 22.29 0.00 5.36
495 496 0.177836 GAAGAGAGAGAGGCCTTGGC 59.822 60.000 6.77 2.49 0.00 4.52
496 497 0.829990 GGAAGAGAGAGAGGCCTTGG 59.170 60.000 6.77 0.00 0.00 3.61
497 498 1.206849 GTGGAAGAGAGAGAGGCCTTG 59.793 57.143 6.77 0.00 0.00 3.61
498 499 1.203237 TGTGGAAGAGAGAGAGGCCTT 60.203 52.381 6.77 0.00 0.00 4.35
502 503 5.867903 ATATGTTGTGGAAGAGAGAGAGG 57.132 43.478 0.00 0.00 0.00 3.69
579 581 7.353414 TCTCTTCTCCGTCTCATAAATTGAT 57.647 36.000 0.00 0.00 32.72 2.57
667 674 2.594131 CACGACAGGGTATCCAGGATA 58.406 52.381 4.87 4.87 34.83 2.59
669 676 0.686441 CCACGACAGGGTATCCAGGA 60.686 60.000 0.00 0.00 34.83 3.86
743 793 2.106683 CCGCGGTGGTCTCATTTCC 61.107 63.158 19.50 0.00 0.00 3.13
774 831 4.443266 AGCGGAGTCGGCAGCTTC 62.443 66.667 22.91 0.00 36.41 3.86
886 960 0.097150 GCTTCCGACCGATGCTTTTC 59.903 55.000 0.00 0.00 38.36 2.29
1374 1619 3.883830 TTAGCAGAAGAGAAGAGGCAG 57.116 47.619 0.00 0.00 0.00 4.85
1683 2057 9.528018 AACACAAACAACAAGAACATAATTAGG 57.472 29.630 0.00 0.00 0.00 2.69
1712 2115 5.348724 CGCAACACTGTAATATATAGCAGGG 59.651 44.000 13.89 13.89 38.26 4.45
1719 2122 6.169557 TCCCTTCGCAACACTGTAATATAT 57.830 37.500 0.00 0.00 0.00 0.86
1720 2123 5.601583 TCCCTTCGCAACACTGTAATATA 57.398 39.130 0.00 0.00 0.00 0.86
1721 2124 4.481368 TCCCTTCGCAACACTGTAATAT 57.519 40.909 0.00 0.00 0.00 1.28
1813 2216 7.339721 CAGAGATTGTAGTAGTAGTGGGAAAGA 59.660 40.741 0.00 0.00 0.00 2.52
2229 2656 8.260270 ACATTTTCTAACTGAATAACCGGTAC 57.740 34.615 8.00 0.23 34.24 3.34
2261 2697 4.267690 TCAGCGCTGTATTAATTCGTTCTG 59.732 41.667 34.70 6.14 0.00 3.02
2265 2701 4.041740 TCTCAGCGCTGTATTAATTCGT 57.958 40.909 34.70 0.00 0.00 3.85
2326 2769 7.176865 ACCTAACTAAAAGGCCTGAAGAAAATC 59.823 37.037 5.69 0.00 37.67 2.17
2330 2773 5.578157 ACCTAACTAAAAGGCCTGAAGAA 57.422 39.130 5.69 0.00 37.67 2.52
2343 2786 9.236006 CCTGTAGTTTCTAGTGTACCTAACTAA 57.764 37.037 0.00 0.00 29.96 2.24
2344 2787 8.386264 ACCTGTAGTTTCTAGTGTACCTAACTA 58.614 37.037 0.00 0.00 0.00 2.24
2345 2788 7.176340 CACCTGTAGTTTCTAGTGTACCTAACT 59.824 40.741 0.00 0.00 0.00 2.24
2346 2789 7.040132 ACACCTGTAGTTTCTAGTGTACCTAAC 60.040 40.741 0.00 0.00 36.73 2.34
2414 2861 9.685276 ACAATGGTGTATCAGATCAGATTTTTA 57.315 29.630 5.87 0.00 35.72 1.52
2415 2862 8.464404 CACAATGGTGTATCAGATCAGATTTTT 58.536 33.333 5.87 0.00 40.24 1.94
2416 2863 7.830697 TCACAATGGTGTATCAGATCAGATTTT 59.169 33.333 5.87 0.00 45.45 1.82
2417 2864 7.341030 TCACAATGGTGTATCAGATCAGATTT 58.659 34.615 5.87 0.00 45.45 2.17
2418 2865 6.892485 TCACAATGGTGTATCAGATCAGATT 58.108 36.000 5.87 0.00 45.45 2.40
2638 3839 6.191661 CACACCATATGTAATTAAGTGTGCG 58.808 40.000 19.33 4.92 44.70 5.34
3161 4515 7.508977 TCCCTTGAGACCATTTATTTTCTGTTT 59.491 33.333 0.00 0.00 0.00 2.83
3162 4516 7.010160 TCCCTTGAGACCATTTATTTTCTGTT 58.990 34.615 0.00 0.00 0.00 3.16
3163 4517 6.552008 TCCCTTGAGACCATTTATTTTCTGT 58.448 36.000 0.00 0.00 0.00 3.41
3164 4518 6.886459 TCTCCCTTGAGACCATTTATTTTCTG 59.114 38.462 0.00 0.00 42.73 3.02
3165 4519 7.032598 TCTCCCTTGAGACCATTTATTTTCT 57.967 36.000 0.00 0.00 42.73 2.52
3198 4559 4.143473 GCTGCACAACTCAAATTTTCATCG 60.143 41.667 0.00 0.00 0.00 3.84
3418 4789 6.374333 TCTGCTATGGAAATGTTGGTTAAGAC 59.626 38.462 0.00 0.00 0.00 3.01
3550 4930 3.128589 TGTTCTTGTGAGACCTTTGTTGC 59.871 43.478 0.00 0.00 0.00 4.17
3554 4934 3.316029 TGCATGTTCTTGTGAGACCTTTG 59.684 43.478 0.00 0.00 0.00 2.77
3558 4938 3.076621 TGATGCATGTTCTTGTGAGACC 58.923 45.455 2.46 0.00 0.00 3.85
3568 4948 0.174162 GGGTGGCTTGATGCATGTTC 59.826 55.000 2.46 0.00 45.15 3.18
3575 4955 2.409870 GGCTTCGGGTGGCTTGATG 61.410 63.158 0.00 0.00 0.00 3.07
3676 5056 4.562789 GGTTTGTAGGTTCCGATACGTTAC 59.437 45.833 0.00 0.00 0.00 2.50
3714 5106 1.539827 GGCCTCTAAAACGTGTGCATT 59.460 47.619 0.00 0.00 0.00 3.56
3732 5124 2.108976 TTCGAGGATGATGGCGGC 59.891 61.111 0.00 0.00 0.00 6.53
3735 5127 1.595382 CCGGTTCGAGGATGATGGC 60.595 63.158 0.00 0.00 0.00 4.40
3736 5128 0.530650 CACCGGTTCGAGGATGATGG 60.531 60.000 2.97 0.00 0.00 3.51
3740 5132 1.153628 GGTCACCGGTTCGAGGATG 60.154 63.158 2.97 0.00 0.00 3.51
3753 5145 3.261897 TCTCTTTCCTGAAGATGGGTCAC 59.738 47.826 0.00 0.00 43.23 3.67
3776 5168 2.300152 GGACTGATAAGGATGATGCGGA 59.700 50.000 0.00 0.00 0.00 5.54
3777 5169 2.037641 TGGACTGATAAGGATGATGCGG 59.962 50.000 0.00 0.00 0.00 5.69
3778 5170 3.391506 TGGACTGATAAGGATGATGCG 57.608 47.619 0.00 0.00 0.00 4.73
3790 5182 2.301296 GTCGATGGATGGATGGACTGAT 59.699 50.000 0.00 0.00 30.62 2.90
3791 5183 1.688735 GTCGATGGATGGATGGACTGA 59.311 52.381 0.00 0.00 30.62 3.41
3798 5190 1.069765 GTGGCGTCGATGGATGGAT 59.930 57.895 6.79 0.00 0.00 3.41
3806 5198 4.771356 CGTCGTGGTGGCGTCGAT 62.771 66.667 0.00 0.00 43.57 3.59
3841 5233 3.886329 GAGCCAGTTTGCACGCAGC 62.886 63.158 0.00 0.00 45.96 5.25
3843 5235 2.515757 TGAGCCAGTTTGCACGCA 60.516 55.556 0.00 0.00 0.00 5.24
3847 5239 1.544093 CCTTCTCTGAGCCAGTTTGCA 60.544 52.381 0.00 0.00 32.61 4.08
3855 5247 1.474855 GGATTCAGCCTTCTCTGAGCC 60.475 57.143 0.00 0.00 43.23 4.70
3856 5248 1.805871 CGGATTCAGCCTTCTCTGAGC 60.806 57.143 0.00 0.00 43.23 4.26
3857 5249 1.480137 ACGGATTCAGCCTTCTCTGAG 59.520 52.381 0.00 0.00 43.23 3.35
3858 5250 1.478510 GACGGATTCAGCCTTCTCTGA 59.521 52.381 0.00 0.00 40.99 3.27
3859 5251 1.800655 CGACGGATTCAGCCTTCTCTG 60.801 57.143 0.00 0.00 35.46 3.35
3860 5252 0.457851 CGACGGATTCAGCCTTCTCT 59.542 55.000 0.00 0.00 0.00 3.10
3861 5253 0.173708 ACGACGGATTCAGCCTTCTC 59.826 55.000 0.00 0.00 0.00 2.87
3862 5254 0.608640 AACGACGGATTCAGCCTTCT 59.391 50.000 0.00 0.00 0.00 2.85
3863 5255 1.393883 GAAACGACGGATTCAGCCTTC 59.606 52.381 0.00 0.00 0.00 3.46
3864 5256 1.002087 AGAAACGACGGATTCAGCCTT 59.998 47.619 15.20 0.00 0.00 4.35
3865 5257 0.608640 AGAAACGACGGATTCAGCCT 59.391 50.000 15.20 0.00 0.00 4.58
3866 5258 1.000145 GAGAAACGACGGATTCAGCC 59.000 55.000 15.20 3.86 0.00 4.85
3867 5259 1.390463 GTGAGAAACGACGGATTCAGC 59.610 52.381 15.20 8.93 0.00 4.26
3868 5260 1.993370 GGTGAGAAACGACGGATTCAG 59.007 52.381 15.20 0.00 0.00 3.02
3869 5261 1.341852 TGGTGAGAAACGACGGATTCA 59.658 47.619 15.20 4.51 0.00 2.57
3870 5262 2.074547 TGGTGAGAAACGACGGATTC 57.925 50.000 0.00 3.63 0.00 2.52
3871 5263 2.742053 CAATGGTGAGAAACGACGGATT 59.258 45.455 0.00 0.00 0.00 3.01
3872 5264 2.028476 TCAATGGTGAGAAACGACGGAT 60.028 45.455 0.00 0.00 0.00 4.18
3873 5265 1.341852 TCAATGGTGAGAAACGACGGA 59.658 47.619 0.00 0.00 0.00 4.69
3874 5266 1.459592 GTCAATGGTGAGAAACGACGG 59.540 52.381 0.00 0.00 33.27 4.79
3875 5267 1.124297 CGTCAATGGTGAGAAACGACG 59.876 52.381 0.00 0.00 38.79 5.12
3876 5268 1.136336 GCGTCAATGGTGAGAAACGAC 60.136 52.381 0.00 0.00 33.27 4.34
3877 5269 1.144969 GCGTCAATGGTGAGAAACGA 58.855 50.000 0.00 0.00 33.27 3.85
3878 5270 1.148310 AGCGTCAATGGTGAGAAACG 58.852 50.000 0.00 0.00 33.27 3.60
3879 5271 4.025647 GCTATAGCGTCAATGGTGAGAAAC 60.026 45.833 9.40 0.00 33.27 2.78
3880 5272 4.119862 GCTATAGCGTCAATGGTGAGAAA 58.880 43.478 9.40 0.00 33.27 2.52
3881 5273 3.717707 GCTATAGCGTCAATGGTGAGAA 58.282 45.455 9.40 0.00 33.27 2.87
3882 5274 3.371102 GCTATAGCGTCAATGGTGAGA 57.629 47.619 9.40 0.00 33.27 3.27
3895 5287 2.416893 GCCTGCTATTTTCCGCTATAGC 59.583 50.000 15.09 15.09 45.97 2.97
3896 5288 3.931578 AGCCTGCTATTTTCCGCTATAG 58.068 45.455 0.00 0.00 0.00 1.31
3897 5289 5.677319 ATAGCCTGCTATTTTCCGCTATA 57.323 39.130 5.84 0.00 37.67 1.31
3898 5290 2.938956 AGCCTGCTATTTTCCGCTAT 57.061 45.000 0.00 0.00 0.00 2.97
3899 5291 4.065088 CAATAGCCTGCTATTTTCCGCTA 58.935 43.478 19.12 0.00 44.18 4.26
3900 5292 2.880890 CAATAGCCTGCTATTTTCCGCT 59.119 45.455 19.12 0.00 44.18 5.52
3901 5293 2.030805 CCAATAGCCTGCTATTTTCCGC 60.031 50.000 19.12 0.00 44.18 5.54
3902 5294 2.030805 GCCAATAGCCTGCTATTTTCCG 60.031 50.000 19.12 9.85 44.18 4.30
3903 5295 2.030805 CGCCAATAGCCTGCTATTTTCC 60.031 50.000 19.12 10.77 44.18 3.13
3904 5296 2.618709 ACGCCAATAGCCTGCTATTTTC 59.381 45.455 19.12 13.26 44.18 2.29
3905 5297 2.618709 GACGCCAATAGCCTGCTATTTT 59.381 45.455 19.12 6.69 44.18 1.82
3906 5298 2.222027 GACGCCAATAGCCTGCTATTT 58.778 47.619 19.12 7.43 44.18 1.40
3907 5299 1.873903 CGACGCCAATAGCCTGCTATT 60.874 52.381 16.64 16.64 46.58 1.73
3908 5300 0.319900 CGACGCCAATAGCCTGCTAT 60.320 55.000 5.84 5.84 40.63 2.97
3909 5301 1.067416 CGACGCCAATAGCCTGCTA 59.933 57.895 0.64 0.64 38.78 3.49
3910 5302 2.202932 CGACGCCAATAGCCTGCT 60.203 61.111 0.00 0.00 38.78 4.24
3911 5303 2.106683 AACGACGCCAATAGCCTGC 61.107 57.895 0.00 0.00 38.78 4.85
3912 5304 1.019278 ACAACGACGCCAATAGCCTG 61.019 55.000 0.00 0.00 38.78 4.85
3913 5305 0.739813 GACAACGACGCCAATAGCCT 60.740 55.000 0.00 0.00 38.78 4.58
3914 5306 1.017177 TGACAACGACGCCAATAGCC 61.017 55.000 0.00 0.00 38.78 3.93
3915 5307 0.793861 TTGACAACGACGCCAATAGC 59.206 50.000 0.00 0.00 38.52 2.97
3916 5308 3.740044 AATTGACAACGACGCCAATAG 57.260 42.857 0.00 0.00 0.00 1.73
3917 5309 4.491234 AAAATTGACAACGACGCCAATA 57.509 36.364 0.00 0.00 0.00 1.90
3918 5310 3.363341 AAAATTGACAACGACGCCAAT 57.637 38.095 0.00 0.00 0.00 3.16
3919 5311 2.853731 AAAATTGACAACGACGCCAA 57.146 40.000 0.00 0.00 0.00 4.52
3920 5312 2.853731 AAAAATTGACAACGACGCCA 57.146 40.000 0.00 0.00 0.00 5.69
3937 5329 5.478407 GCTTAGGCTATTTTCTGGCAAAAA 58.522 37.500 0.00 9.06 31.83 1.94
3938 5330 5.072040 GCTTAGGCTATTTTCTGGCAAAA 57.928 39.130 0.00 0.00 31.83 2.44
3939 5331 4.718940 GCTTAGGCTATTTTCTGGCAAA 57.281 40.909 0.00 0.00 31.83 3.68
3953 5345 1.678101 CATTAGGTGGCAAGCTTAGGC 59.322 52.381 0.00 7.07 35.29 3.93
3954 5346 2.945668 GACATTAGGTGGCAAGCTTAGG 59.054 50.000 0.00 0.00 35.22 2.69
3955 5347 3.609853 TGACATTAGGTGGCAAGCTTAG 58.390 45.455 0.00 0.00 44.83 2.18
3956 5348 3.712016 TGACATTAGGTGGCAAGCTTA 57.288 42.857 0.00 0.00 44.83 3.09
3957 5349 2.584835 TGACATTAGGTGGCAAGCTT 57.415 45.000 0.00 0.00 44.83 3.74
3962 5354 2.949177 ACAGTTGACATTAGGTGGCA 57.051 45.000 0.00 0.00 46.60 4.92
3963 5355 3.939066 ACTACAGTTGACATTAGGTGGC 58.061 45.455 0.00 0.00 35.91 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.