Multiple sequence alignment - TraesCS2D01G588900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G588900 chr2D 100.000 4110 0 0 1 4110 645823589 645827698 0.000000e+00 7590.0
1 TraesCS2D01G588900 chr2D 91.454 2785 152 40 663 3419 645744106 645741380 0.000000e+00 3746.0
2 TraesCS2D01G588900 chr2D 95.670 993 41 2 918 1909 645811655 645810664 0.000000e+00 1594.0
3 TraesCS2D01G588900 chr2D 89.831 236 18 3 3574 3808 645740994 645740764 8.640000e-77 298.0
4 TraesCS2D01G588900 chr2D 96.341 164 4 2 283 446 616648519 616648358 6.770000e-68 268.0
5 TraesCS2D01G588900 chr2D 85.328 259 26 4 1 259 645757312 645757066 1.470000e-64 257.0
6 TraesCS2D01G588900 chr2D 90.141 142 12 1 1968 2109 645810661 645810522 2.520000e-42 183.0
7 TraesCS2D01G588900 chr2D 88.119 101 10 2 559 658 249890177 249890078 7.220000e-23 119.0
8 TraesCS2D01G588900 chr2B 90.856 2559 198 22 668 3196 789694632 789692080 0.000000e+00 3397.0
9 TraesCS2D01G588900 chr2B 95.808 167 6 1 280 446 174794819 174794984 6.770000e-68 268.0
10 TraesCS2D01G588900 chr2B 89.130 184 15 3 1 181 789695478 789695297 1.490000e-54 224.0
11 TraesCS2D01G588900 chr2A 87.872 2787 257 47 691 3419 771507334 771510097 0.000000e+00 3199.0
12 TraesCS2D01G588900 chr2A 88.806 134 12 2 31 163 771507006 771507137 1.180000e-35 161.0
13 TraesCS2D01G588900 chr5B 96.364 165 5 1 282 446 440259543 440259706 1.880000e-68 270.0
14 TraesCS2D01G588900 chr5B 91.837 196 9 7 283 476 427931366 427931176 2.440000e-67 267.0
15 TraesCS2D01G588900 chr5B 87.861 173 20 1 1 173 340042271 340042100 6.970000e-48 202.0
16 TraesCS2D01G588900 chr5B 91.765 85 6 1 559 643 585279483 585279566 2.600000e-22 117.0
17 TraesCS2D01G588900 chr5B 85.263 95 10 4 560 652 305592324 305592416 1.220000e-15 95.3
18 TraesCS2D01G588900 chr3D 96.364 165 5 1 282 446 79558706 79558543 1.880000e-68 270.0
19 TraesCS2D01G588900 chr3D 95.238 168 7 1 279 446 217587556 217587722 8.760000e-67 265.0
20 TraesCS2D01G588900 chr6A 94.286 175 6 4 273 446 153669703 153669874 8.760000e-67 265.0
21 TraesCS2D01G588900 chr6D 95.152 165 7 1 282 446 406391358 406391521 4.080000e-65 259.0
22 TraesCS2D01G588900 chr6D 100.000 28 0 0 1173 1200 470573724 470573751 7.000000e-03 52.8
23 TraesCS2D01G588900 chr7A 91.398 186 11 5 282 467 347249350 347249530 2.450000e-62 250.0
24 TraesCS2D01G588900 chr7A 88.119 101 10 2 559 658 421785140 421785041 7.220000e-23 119.0
25 TraesCS2D01G588900 chr6B 88.235 170 19 1 1 170 100666936 100667104 6.970000e-48 202.0
26 TraesCS2D01G588900 chr6B 88.000 100 9 3 559 657 568575323 568575420 9.340000e-22 115.0
27 TraesCS2D01G588900 chr6B 100.000 28 0 0 1173 1200 720561871 720561844 7.000000e-03 52.8
28 TraesCS2D01G588900 chr7B 87.647 170 20 1 1 170 64012752 64012920 3.240000e-46 196.0
29 TraesCS2D01G588900 chr7B 87.059 170 20 2 1 170 239559758 239559925 1.510000e-44 191.0
30 TraesCS2D01G588900 chr7B 88.000 100 9 3 559 657 720874843 720874746 9.340000e-22 115.0
31 TraesCS2D01G588900 chr4B 87.647 170 20 1 1 170 267403583 267403751 3.240000e-46 196.0
32 TraesCS2D01G588900 chr3B 86.139 101 8 3 560 659 588476108 588476013 2.020000e-18 104.0
33 TraesCS2D01G588900 chr5D 85.149 101 13 2 559 658 369318236 369318335 7.270000e-18 102.0
34 TraesCS2D01G588900 chr5D 94.595 37 1 1 535 571 336421292 336421327 5.740000e-04 56.5
35 TraesCS2D01G588900 chr3A 84.314 102 14 2 559 658 476997365 476997466 9.400000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G588900 chr2D 645823589 645827698 4109 False 7590.0 7590 100.0000 1 4110 1 chr2D.!!$F1 4109
1 TraesCS2D01G588900 chr2D 645740764 645744106 3342 True 2022.0 3746 90.6425 663 3808 2 chr2D.!!$R4 3145
2 TraesCS2D01G588900 chr2D 645810522 645811655 1133 True 888.5 1594 92.9055 918 2109 2 chr2D.!!$R5 1191
3 TraesCS2D01G588900 chr2B 789692080 789695478 3398 True 1810.5 3397 89.9930 1 3196 2 chr2B.!!$R1 3195
4 TraesCS2D01G588900 chr2A 771507006 771510097 3091 False 1680.0 3199 88.3390 31 3419 2 chr2A.!!$F1 3388

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
295 343 0.173708 CACTGCTACTCCCTCCGTTC 59.826 60.0 0.00 0.00 0.0 3.95 F
730 964 0.249826 AAACAAAAGCATGCCACCCG 60.250 50.0 15.66 1.88 0.0 5.28 F
1822 2085 0.669318 GCAGGTGTTCGATCGGTTGA 60.669 55.0 16.41 0.00 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1962 2226 0.381801 CAAAGTCTGCAAACACGCCT 59.618 50.0 0.0 0.0 0.00 5.52 R
2129 2393 0.736325 CCATGACACGACGTTCCTCC 60.736 60.0 0.0 0.0 0.00 4.30 R
3519 4146 0.191064 ACCAGTGGTCTCCAAGAGGA 59.809 55.0 9.7 0.0 43.21 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.688197 AGTTTGGTGCCATTCAACTGG 59.312 47.619 6.11 0.00 39.45 4.00
28 29 0.478072 TGGTGCCATTCAACTGGAGT 59.522 50.000 0.00 0.00 38.69 3.85
77 78 7.331791 AGCTTAGGACTGGTTGATTAGTTTAG 58.668 38.462 0.00 0.00 0.00 1.85
88 89 7.658575 TGGTTGATTAGTTTAGTGTACTTGACC 59.341 37.037 0.00 0.00 0.00 4.02
90 91 9.918630 GTTGATTAGTTTAGTGTACTTGACCTA 57.081 33.333 0.00 0.00 0.00 3.08
97 98 8.521176 AGTTTAGTGTACTTGACCTACTGTATG 58.479 37.037 0.00 0.00 0.00 2.39
98 99 5.916661 AGTGTACTTGACCTACTGTATGG 57.083 43.478 0.00 0.00 0.00 2.74
105 106 9.880157 GTACTTGACCTACTGTATGGAAAAATA 57.120 33.333 9.37 0.00 0.00 1.40
155 159 2.766263 TGGATGCAAGTCTACCAGTAGG 59.234 50.000 5.04 0.00 42.21 3.18
181 185 9.774742 GAAGAAAAATGCCAATTACTGTACTAG 57.225 33.333 0.00 0.00 0.00 2.57
205 242 5.869649 AGTATTTTGCAAGGTTCTGGTTT 57.130 34.783 0.00 0.00 0.00 3.27
221 258 4.404073 TCTGGTTTGTAAACAATTGCCTGT 59.596 37.500 5.05 0.00 40.63 4.00
222 259 5.091261 TGGTTTGTAAACAATTGCCTGTT 57.909 34.783 5.05 0.00 41.31 3.16
223 260 4.872691 TGGTTTGTAAACAATTGCCTGTTG 59.127 37.500 5.05 0.00 39.47 3.33
224 261 5.112686 GGTTTGTAAACAATTGCCTGTTGA 58.887 37.500 5.05 0.00 39.47 3.18
225 262 5.234116 GGTTTGTAAACAATTGCCTGTTGAG 59.766 40.000 5.05 0.00 39.47 3.02
226 263 5.843673 TTGTAAACAATTGCCTGTTGAGA 57.156 34.783 5.05 0.00 39.47 3.27
227 264 6.403866 TTGTAAACAATTGCCTGTTGAGAT 57.596 33.333 5.05 0.00 39.47 2.75
228 265 5.771469 TGTAAACAATTGCCTGTTGAGATG 58.229 37.500 5.05 0.00 39.47 2.90
236 273 0.747283 CCTGTTGAGATGGCCTGAGC 60.747 60.000 3.32 0.00 38.76 4.26
250 287 1.462670 CCTGAGCGAAGAAGCAACTTC 59.537 52.381 11.25 11.25 41.70 3.01
251 288 1.462670 CTGAGCGAAGAAGCAACTTCC 59.537 52.381 14.24 9.06 40.98 3.46
252 289 1.070758 TGAGCGAAGAAGCAACTTCCT 59.929 47.619 14.24 12.39 40.98 3.36
260 297 3.435590 GCAACTTCCTGCTGTGCA 58.564 55.556 0.00 0.00 39.34 4.57
267 315 2.994387 TTCCTGCTGTGCACCTGACG 62.994 60.000 15.69 0.00 33.79 4.35
279 327 1.276421 CACCTGACGGGAGAATTCACT 59.724 52.381 7.51 0.00 38.76 3.41
286 334 2.166664 ACGGGAGAATTCACTGCTACTC 59.833 50.000 8.44 0.00 0.00 2.59
287 335 2.482142 CGGGAGAATTCACTGCTACTCC 60.482 54.545 8.44 0.00 41.90 3.85
288 336 3.186702 GGAGAATTCACTGCTACTCCC 57.813 52.381 8.44 0.00 38.23 4.30
289 337 2.769095 GGAGAATTCACTGCTACTCCCT 59.231 50.000 8.44 0.00 38.23 4.20
291 339 2.769095 AGAATTCACTGCTACTCCCTCC 59.231 50.000 8.44 0.00 0.00 4.30
292 340 1.115467 ATTCACTGCTACTCCCTCCG 58.885 55.000 0.00 0.00 0.00 4.63
293 341 0.251653 TTCACTGCTACTCCCTCCGT 60.252 55.000 0.00 0.00 0.00 4.69
294 342 0.251653 TCACTGCTACTCCCTCCGTT 60.252 55.000 0.00 0.00 0.00 4.44
295 343 0.173708 CACTGCTACTCCCTCCGTTC 59.826 60.000 0.00 0.00 0.00 3.95
296 344 0.971447 ACTGCTACTCCCTCCGTTCC 60.971 60.000 0.00 0.00 0.00 3.62
298 346 0.627451 TGCTACTCCCTCCGTTCCTA 59.373 55.000 0.00 0.00 0.00 2.94
300 348 2.105766 GCTACTCCCTCCGTTCCTAAA 58.894 52.381 0.00 0.00 0.00 1.85
301 349 2.699321 GCTACTCCCTCCGTTCCTAAAT 59.301 50.000 0.00 0.00 0.00 1.40
302 350 3.893813 GCTACTCCCTCCGTTCCTAAATA 59.106 47.826 0.00 0.00 0.00 1.40
303 351 4.527427 GCTACTCCCTCCGTTCCTAAATAT 59.473 45.833 0.00 0.00 0.00 1.28
304 352 5.336610 GCTACTCCCTCCGTTCCTAAATATC 60.337 48.000 0.00 0.00 0.00 1.63
306 354 4.589374 ACTCCCTCCGTTCCTAAATATCTG 59.411 45.833 0.00 0.00 0.00 2.90
344 492 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
345 493 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
346 494 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
348 496 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
351 499 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
352 500 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
353 501 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
354 502 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
356 504 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
358 506 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
359 507 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
361 509 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
362 510 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
363 511 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
364 512 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
403 551 7.770366 ATATACATCCGTATGTGGTAGTTCA 57.230 36.000 3.56 0.00 45.99 3.18
404 552 6.665992 ATACATCCGTATGTGGTAGTTCAT 57.334 37.500 3.56 0.00 45.99 2.57
406 554 5.741011 ACATCCGTATGTGGTAGTTCATTT 58.259 37.500 0.00 0.00 44.79 2.32
407 555 5.584649 ACATCCGTATGTGGTAGTTCATTTG 59.415 40.000 0.00 0.00 44.79 2.32
408 556 5.408880 TCCGTATGTGGTAGTTCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
410 558 6.231951 TCCGTATGTGGTAGTTCATTTGAAA 58.768 36.000 0.00 0.00 35.58 2.69
411 559 6.148150 TCCGTATGTGGTAGTTCATTTGAAAC 59.852 38.462 0.00 0.00 35.58 2.78
412 560 6.311723 CGTATGTGGTAGTTCATTTGAAACC 58.688 40.000 7.07 7.07 36.15 3.27
414 562 6.575162 ATGTGGTAGTTCATTTGAAACCTC 57.425 37.500 12.88 10.55 36.42 3.85
416 564 6.833041 TGTGGTAGTTCATTTGAAACCTCTA 58.167 36.000 12.88 1.65 36.42 2.43
417 565 7.284074 TGTGGTAGTTCATTTGAAACCTCTAA 58.716 34.615 12.88 0.00 36.42 2.10
418 566 7.776030 TGTGGTAGTTCATTTGAAACCTCTAAA 59.224 33.333 12.88 0.00 36.42 1.85
420 568 9.191479 TGGTAGTTCATTTGAAACCTCTAAAAA 57.809 29.630 12.88 0.00 36.42 1.94
424 572 8.966868 AGTTCATTTGAAACCTCTAAAAAGACA 58.033 29.630 0.00 0.00 35.58 3.41
425 573 9.581099 GTTCATTTGAAACCTCTAAAAAGACAA 57.419 29.630 0.00 0.00 35.58 3.18
446 611 4.976540 AATATTTAGGAACGGAGGGAGG 57.023 45.455 0.00 0.00 0.00 4.30
447 612 1.508256 ATTTAGGAACGGAGGGAGGG 58.492 55.000 0.00 0.00 0.00 4.30
496 666 8.641499 TGTTTGTTTTCATGGAATGTAAGAAC 57.359 30.769 0.00 0.00 46.80 3.01
509 679 6.095021 GGAATGTAAGAACAACAATACTCCCC 59.905 42.308 0.00 0.00 39.58 4.81
530 700 5.022787 CCCCCTTTCATGGAAATGTAAGAA 58.977 41.667 6.64 0.00 32.77 2.52
534 704 8.927411 CCCCTTTCATGGAAATGTAAGAAATAT 58.073 33.333 6.64 0.00 32.77 1.28
573 743 8.561536 TGGAGGGAGTATATAAGATGTTTTGA 57.438 34.615 0.00 0.00 0.00 2.69
646 817 7.924412 ACACTAAAATGTGTCTATATACACCCG 59.076 37.037 16.29 4.09 46.90 5.28
653 824 6.140303 GTGTCTATATACACCCGTTCAGAA 57.860 41.667 9.65 0.00 43.23 3.02
709 943 1.897560 AGCCAACACCAGCTACTTTC 58.102 50.000 0.00 0.00 37.64 2.62
714 948 4.359706 CCAACACCAGCTACTTTCAAAAC 58.640 43.478 0.00 0.00 0.00 2.43
730 964 0.249826 AAACAAAAGCATGCCACCCG 60.250 50.000 15.66 1.88 0.00 5.28
746 980 3.324993 CACCCGGTTCAAAATTTCCATG 58.675 45.455 0.00 0.00 0.00 3.66
753 988 6.418141 CGGTTCAAAATTTCCATGTGAAAAC 58.582 36.000 11.70 6.13 45.67 2.43
783 1018 7.652909 TGATTTTGAGCCAAATTTGTACTGAAG 59.347 33.333 16.73 1.11 33.19 3.02
784 1019 6.707440 TTTGAGCCAAATTTGTACTGAAGA 57.293 33.333 16.73 3.90 0.00 2.87
785 1020 6.707440 TTGAGCCAAATTTGTACTGAAGAA 57.293 33.333 16.73 2.43 0.00 2.52
797 1032 6.539649 TGTACTGAAGAACCTTGAAAATCG 57.460 37.500 0.00 0.00 0.00 3.34
807 1042 3.181497 ACCTTGAAAATCGCATTCCATCG 60.181 43.478 0.00 0.00 0.00 3.84
818 1056 3.625938 GCATTCCATCGCTTCAGAAATC 58.374 45.455 0.00 0.00 0.00 2.17
827 1065 4.240888 TCGCTTCAGAAATCACAGAGAAG 58.759 43.478 0.00 0.00 36.47 2.85
839 1077 8.697507 AAATCACAGAGAAGAAAAATACCACT 57.302 30.769 0.00 0.00 0.00 4.00
845 1083 7.775561 ACAGAGAAGAAAAATACCACTCTTGTT 59.224 33.333 0.00 0.00 32.12 2.83
860 1098 4.044825 ACTCTTGTTCCTCTCCCTCTTCTA 59.955 45.833 0.00 0.00 0.00 2.10
867 1105 2.630580 CCTCTCCCTCTTCTATTTCCCG 59.369 54.545 0.00 0.00 0.00 5.14
894 1132 4.113815 CATTCCCAGCGAGCCCCA 62.114 66.667 0.00 0.00 0.00 4.96
925 1188 2.114616 CTCCTCCACATGCTAACCTCT 58.885 52.381 0.00 0.00 0.00 3.69
931 1194 1.592669 CATGCTAACCTCTCCGCGG 60.593 63.158 22.12 22.12 0.00 6.46
939 1202 2.766400 CCTCTCCGCGGTCTCTCAC 61.766 68.421 27.15 0.00 0.00 3.51
1651 1914 1.148273 TTCACCTTCGCCAGCTTGT 59.852 52.632 0.00 0.00 0.00 3.16
1822 2085 0.669318 GCAGGTGTTCGATCGGTTGA 60.669 55.000 16.41 0.00 0.00 3.18
1869 2132 2.230940 GGTGATCGTCGGTCATGCG 61.231 63.158 12.08 0.00 0.00 4.73
1927 2191 2.947532 CGGTTCTGGAGCTCTGGCA 61.948 63.158 14.64 2.06 41.70 4.92
1962 2226 1.683385 CATGTCCTCTCCAGCATCGTA 59.317 52.381 0.00 0.00 0.00 3.43
2129 2393 2.182030 GTTCTGGGAGACGCCGAG 59.818 66.667 0.57 0.57 43.35 4.63
2325 2589 1.986378 CGGTATTTCTCGATGATCCGC 59.014 52.381 0.00 0.00 0.00 5.54
2421 2685 2.671682 GAGGCCAGGGACCTTGTC 59.328 66.667 5.01 0.00 37.77 3.18
2507 2771 1.978455 AAGGACGTCACCACAGCCAA 61.978 55.000 18.91 0.00 0.00 4.52
2783 3048 1.913722 CAGGATGAGGGAGCAGCTT 59.086 57.895 0.00 0.00 39.69 3.74
2905 3175 2.675423 CTGTGGCTGCTGCACCAT 60.675 61.111 21.10 0.00 41.91 3.55
2944 3235 1.238896 ATGGGGAGGAAGAGGAGGGA 61.239 60.000 0.00 0.00 0.00 4.20
3014 3305 0.396811 CCACGAGTTCTTCAAGGGGT 59.603 55.000 0.00 0.00 0.00 4.95
3046 3337 2.372074 GGGGAGGGCGATGGTTGTA 61.372 63.158 0.00 0.00 0.00 2.41
3049 3340 0.539986 GGAGGGCGATGGTTGTAAGA 59.460 55.000 0.00 0.00 0.00 2.10
3118 3409 2.628657 AGACTACTGGTGACTTGTGACC 59.371 50.000 2.45 2.45 0.00 4.02
3124 3415 0.685097 GGTGACTTGTGACCTGGCTA 59.315 55.000 2.19 0.00 0.00 3.93
3128 3419 3.006537 GTGACTTGTGACCTGGCTAACTA 59.993 47.826 0.00 0.00 0.00 2.24
3213 3516 5.854866 CGAAATGCTAAGCAACATGGATATG 59.145 40.000 0.00 0.00 43.62 1.78
3321 3652 0.189822 TTTGGGAAGAGGGTTTGGGG 59.810 55.000 0.00 0.00 0.00 4.96
3323 3654 1.383019 GGGAAGAGGGTTTGGGGAC 59.617 63.158 0.00 0.00 0.00 4.46
3328 3659 3.920093 GAGGGTTTGGGGACTGCCG 62.920 68.421 0.00 0.00 33.83 5.69
3354 3685 3.645884 CCCAAGTGAAGTTGAGCATTTG 58.354 45.455 0.00 0.00 33.25 2.32
3357 3688 5.510179 CCCAAGTGAAGTTGAGCATTTGATT 60.510 40.000 0.00 0.00 34.77 2.57
3363 3694 1.994779 GTTGAGCATTTGATTTGGGCG 59.005 47.619 0.00 0.00 0.00 6.13
3387 3725 3.843619 TGATTTGGTCACAGTATCCTGGA 59.156 43.478 0.00 0.00 43.36 3.86
3388 3726 3.981071 TTTGGTCACAGTATCCTGGAG 57.019 47.619 1.52 0.00 43.36 3.86
3389 3727 1.866015 TGGTCACAGTATCCTGGAGG 58.134 55.000 1.52 0.00 43.36 4.30
3400 3738 2.132996 CCTGGAGGCAGCTCGATCT 61.133 63.158 0.00 0.00 0.00 2.75
3443 4032 9.401058 GGCAACTTTAGCATCTATATATGGATT 57.599 33.333 8.75 0.00 0.00 3.01
3459 4086 2.099592 TGGATTAGCCAGGTACGTAACG 59.900 50.000 4.68 0.15 43.33 3.18
3484 4111 7.213706 CGTAACGTACATTGCTGAATTTACTTG 59.786 37.037 0.00 0.00 0.00 3.16
3485 4112 6.795098 ACGTACATTGCTGAATTTACTTGA 57.205 33.333 0.00 0.00 0.00 3.02
3486 4113 7.197071 ACGTACATTGCTGAATTTACTTGAA 57.803 32.000 0.00 0.00 0.00 2.69
3502 4129 5.382618 ACTTGAAGGAGAATGTTGAATGC 57.617 39.130 0.00 0.00 0.00 3.56
3503 4130 4.219288 ACTTGAAGGAGAATGTTGAATGCC 59.781 41.667 0.00 0.00 0.00 4.40
3504 4131 3.091545 TGAAGGAGAATGTTGAATGCCC 58.908 45.455 0.00 0.00 0.00 5.36
3505 4132 2.149973 AGGAGAATGTTGAATGCCCC 57.850 50.000 0.00 0.00 0.00 5.80
3507 4134 1.681780 GGAGAATGTTGAATGCCCCGA 60.682 52.381 0.00 0.00 0.00 5.14
3508 4135 1.672881 GAGAATGTTGAATGCCCCGAG 59.327 52.381 0.00 0.00 0.00 4.63
3509 4136 1.281867 AGAATGTTGAATGCCCCGAGA 59.718 47.619 0.00 0.00 0.00 4.04
3510 4137 1.672881 GAATGTTGAATGCCCCGAGAG 59.327 52.381 0.00 0.00 0.00 3.20
3526 4153 3.731295 GAGGCTCGAGTTCCTCTTG 57.269 57.895 24.18 0.00 44.19 3.02
3527 4154 0.174617 GAGGCTCGAGTTCCTCTTGG 59.825 60.000 24.18 0.00 44.19 3.61
3528 4155 0.251832 AGGCTCGAGTTCCTCTTGGA 60.252 55.000 15.13 0.00 41.36 3.53
3529 4156 0.174617 GGCTCGAGTTCCTCTTGGAG 59.825 60.000 15.13 0.00 44.24 3.86
3530 4157 1.178276 GCTCGAGTTCCTCTTGGAGA 58.822 55.000 15.13 0.00 44.24 3.71
3531 4158 1.135228 GCTCGAGTTCCTCTTGGAGAC 60.135 57.143 15.13 0.00 44.24 3.36
3532 4159 1.474879 CTCGAGTTCCTCTTGGAGACC 59.525 57.143 3.62 0.00 44.24 3.85
3533 4160 1.203013 TCGAGTTCCTCTTGGAGACCA 60.203 52.381 0.00 0.00 44.24 4.02
3534 4161 1.067495 CGAGTTCCTCTTGGAGACCAC 60.067 57.143 0.00 0.00 44.24 4.16
3535 4162 2.252714 GAGTTCCTCTTGGAGACCACT 58.747 52.381 0.00 0.00 44.24 4.00
3536 4163 1.974236 AGTTCCTCTTGGAGACCACTG 59.026 52.381 0.00 0.00 44.24 3.66
3537 4164 1.002544 GTTCCTCTTGGAGACCACTGG 59.997 57.143 0.00 0.00 44.24 4.00
3538 4165 0.191064 TCCTCTTGGAGACCACTGGT 59.809 55.000 0.00 0.00 37.46 4.00
3550 4177 4.592485 GACCACTGGTCCTACTGATATG 57.408 50.000 16.54 0.00 46.19 1.78
3551 4178 2.700897 ACCACTGGTCCTACTGATATGC 59.299 50.000 0.00 0.00 0.00 3.14
3552 4179 2.700371 CCACTGGTCCTACTGATATGCA 59.300 50.000 0.00 0.00 0.00 3.96
3553 4180 3.326006 CCACTGGTCCTACTGATATGCAT 59.674 47.826 3.79 3.79 0.00 3.96
3554 4181 4.202398 CCACTGGTCCTACTGATATGCATT 60.202 45.833 3.54 0.00 0.00 3.56
3555 4182 4.753610 CACTGGTCCTACTGATATGCATTG 59.246 45.833 3.54 0.00 0.00 2.82
3556 4183 4.202398 ACTGGTCCTACTGATATGCATTGG 60.202 45.833 3.54 0.00 0.00 3.16
3557 4184 3.077359 GGTCCTACTGATATGCATTGGC 58.923 50.000 3.54 0.00 41.68 4.52
3558 4185 3.077359 GTCCTACTGATATGCATTGGCC 58.923 50.000 3.54 0.00 40.13 5.36
3559 4186 2.981784 TCCTACTGATATGCATTGGCCT 59.018 45.455 3.54 0.00 40.13 5.19
3560 4187 3.079578 CCTACTGATATGCATTGGCCTG 58.920 50.000 3.54 0.00 40.13 4.85
3561 4188 1.325355 ACTGATATGCATTGGCCTGC 58.675 50.000 3.54 9.99 42.62 4.85
3562 4189 0.601558 CTGATATGCATTGGCCTGCC 59.398 55.000 13.97 0.00 41.58 4.85
3563 4190 0.828762 TGATATGCATTGGCCTGCCC 60.829 55.000 13.97 2.51 41.58 5.36
3564 4191 0.541296 GATATGCATTGGCCTGCCCT 60.541 55.000 13.97 4.73 41.58 5.19
3565 4192 0.541296 ATATGCATTGGCCTGCCCTC 60.541 55.000 13.97 0.00 41.58 4.30
3566 4193 2.645394 TATGCATTGGCCTGCCCTCC 62.645 60.000 13.97 0.00 41.58 4.30
3567 4194 4.453892 GCATTGGCCTGCCCTCCT 62.454 66.667 3.32 0.00 36.10 3.69
3568 4195 2.361771 CATTGGCCTGCCCTCCTT 59.638 61.111 3.32 0.00 34.56 3.36
3569 4196 2.056223 CATTGGCCTGCCCTCCTTG 61.056 63.158 3.32 0.00 34.56 3.61
3578 4205 1.078567 GCCCTCCTTGCTGTCTCTG 60.079 63.158 0.00 0.00 0.00 3.35
3653 4280 2.865308 GCAACTCGCGGTTTACCC 59.135 61.111 6.13 0.00 35.74 3.69
3668 4295 1.754380 TACCCGTGTGCTGAGTGCTT 61.754 55.000 0.00 0.00 43.37 3.91
3669 4296 2.610694 CCCGTGTGCTGAGTGCTTG 61.611 63.158 0.00 0.00 43.37 4.01
3670 4297 2.250485 CGTGTGCTGAGTGCTTGC 59.750 61.111 0.00 0.00 43.37 4.01
3671 4298 2.249535 CGTGTGCTGAGTGCTTGCT 61.250 57.895 0.00 0.00 43.37 3.91
3683 4310 1.127567 TGCTTGCTGACACTACCCCT 61.128 55.000 0.00 0.00 0.00 4.79
3690 4317 2.694109 GCTGACACTACCCCTTACCTAG 59.306 54.545 0.00 0.00 0.00 3.02
3700 4327 1.674817 CCCTTACCTAGTGTGTTGCCG 60.675 57.143 0.00 0.00 0.00 5.69
3729 4356 0.469705 AAATGTTCAGGTGGGCAGCA 60.470 50.000 0.00 0.00 0.00 4.41
3744 4371 2.225117 GGCAGCATGACCCCCTATAAAT 60.225 50.000 0.00 0.00 39.24 1.40
3750 4377 5.134339 AGCATGACCCCCTATAAATCTTTCA 59.866 40.000 0.00 0.00 0.00 2.69
3752 4379 6.323739 GCATGACCCCCTATAAATCTTTCAAA 59.676 38.462 0.00 0.00 0.00 2.69
3754 4381 8.579863 CATGACCCCCTATAAATCTTTCAAATC 58.420 37.037 0.00 0.00 0.00 2.17
3756 4383 7.998964 TGACCCCCTATAAATCTTTCAAATCTC 59.001 37.037 0.00 0.00 0.00 2.75
3758 4385 8.221251 ACCCCCTATAAATCTTTCAAATCTCTC 58.779 37.037 0.00 0.00 0.00 3.20
3759 4386 7.667635 CCCCCTATAAATCTTTCAAATCTCTCC 59.332 40.741 0.00 0.00 0.00 3.71
3788 4416 8.534333 TTTATATATGCGTCCTTGTCTGAATC 57.466 34.615 0.00 0.00 0.00 2.52
3799 4427 7.412346 CGTCCTTGTCTGAATCAATCTGTTTAG 60.412 40.741 0.00 0.00 0.00 1.85
3800 4428 7.604164 GTCCTTGTCTGAATCAATCTGTTTAGA 59.396 37.037 0.00 0.00 37.35 2.10
3808 4436 8.114331 TGAATCAATCTGTTTAGAGTGCAAAT 57.886 30.769 0.00 0.00 45.91 2.32
3809 4437 8.579006 TGAATCAATCTGTTTAGAGTGCAAATT 58.421 29.630 0.00 0.00 45.91 1.82
3810 4438 9.415544 GAATCAATCTGTTTAGAGTGCAAATTT 57.584 29.630 0.00 0.00 45.91 1.82
3811 4439 9.768662 AATCAATCTGTTTAGAGTGCAAATTTT 57.231 25.926 0.00 0.00 45.91 1.82
3854 4482 2.366469 ACGAGAGTGGTGGATTGCT 58.634 52.632 0.00 0.00 46.97 3.91
3855 4483 0.247736 ACGAGAGTGGTGGATTGCTC 59.752 55.000 0.00 0.00 46.97 4.26
3856 4484 0.247460 CGAGAGTGGTGGATTGCTCA 59.753 55.000 0.00 0.00 0.00 4.26
3857 4485 1.134580 CGAGAGTGGTGGATTGCTCAT 60.135 52.381 0.00 0.00 0.00 2.90
3858 4486 2.679059 CGAGAGTGGTGGATTGCTCATT 60.679 50.000 0.00 0.00 0.00 2.57
3859 4487 3.350833 GAGAGTGGTGGATTGCTCATTT 58.649 45.455 0.00 0.00 0.00 2.32
3860 4488 4.517285 GAGAGTGGTGGATTGCTCATTTA 58.483 43.478 0.00 0.00 0.00 1.40
3861 4489 5.121380 AGAGTGGTGGATTGCTCATTTAT 57.879 39.130 0.00 0.00 0.00 1.40
3862 4490 5.513233 AGAGTGGTGGATTGCTCATTTATT 58.487 37.500 0.00 0.00 0.00 1.40
3863 4491 5.591877 AGAGTGGTGGATTGCTCATTTATTC 59.408 40.000 0.00 0.00 0.00 1.75
3864 4492 4.336433 AGTGGTGGATTGCTCATTTATTCG 59.664 41.667 0.00 0.00 0.00 3.34
3865 4493 3.631686 TGGTGGATTGCTCATTTATTCGG 59.368 43.478 0.00 0.00 0.00 4.30
3866 4494 3.004734 GGTGGATTGCTCATTTATTCGGG 59.995 47.826 0.00 0.00 0.00 5.14
3867 4495 2.622942 TGGATTGCTCATTTATTCGGGC 59.377 45.455 0.00 0.00 0.00 6.13
3868 4496 2.887152 GGATTGCTCATTTATTCGGGCT 59.113 45.455 0.00 0.00 0.00 5.19
3869 4497 3.304928 GGATTGCTCATTTATTCGGGCTG 60.305 47.826 0.00 0.00 0.00 4.85
3870 4498 2.418368 TGCTCATTTATTCGGGCTGT 57.582 45.000 0.00 0.00 0.00 4.40
3871 4499 2.288666 TGCTCATTTATTCGGGCTGTC 58.711 47.619 0.00 0.00 0.00 3.51
3872 4500 2.092968 TGCTCATTTATTCGGGCTGTCT 60.093 45.455 0.00 0.00 0.00 3.41
3873 4501 2.545946 GCTCATTTATTCGGGCTGTCTC 59.454 50.000 0.00 0.00 0.00 3.36
3874 4502 3.742640 GCTCATTTATTCGGGCTGTCTCT 60.743 47.826 0.00 0.00 0.00 3.10
3875 4503 4.054671 CTCATTTATTCGGGCTGTCTCTC 58.945 47.826 0.00 0.00 0.00 3.20
3876 4504 3.706594 TCATTTATTCGGGCTGTCTCTCT 59.293 43.478 0.00 0.00 0.00 3.10
3877 4505 3.526931 TTTATTCGGGCTGTCTCTCTG 57.473 47.619 0.00 0.00 0.00 3.35
3878 4506 1.403814 TATTCGGGCTGTCTCTCTGG 58.596 55.000 0.00 0.00 0.00 3.86
3879 4507 0.324738 ATTCGGGCTGTCTCTCTGGA 60.325 55.000 0.00 0.00 0.00 3.86
3880 4508 0.967887 TTCGGGCTGTCTCTCTGGAG 60.968 60.000 0.00 0.00 40.73 3.86
3881 4509 1.680651 CGGGCTGTCTCTCTGGAGT 60.681 63.158 0.00 0.00 40.29 3.85
3882 4510 1.254284 CGGGCTGTCTCTCTGGAGTT 61.254 60.000 0.00 0.00 40.29 3.01
3883 4511 0.248843 GGGCTGTCTCTCTGGAGTTG 59.751 60.000 0.00 0.00 40.29 3.16
3884 4512 0.972883 GGCTGTCTCTCTGGAGTTGT 59.027 55.000 0.00 0.00 40.29 3.32
3885 4513 1.337635 GGCTGTCTCTCTGGAGTTGTG 60.338 57.143 0.00 0.00 40.29 3.33
3886 4514 1.938926 GCTGTCTCTCTGGAGTTGTGC 60.939 57.143 0.00 0.00 40.29 4.57
3887 4515 1.617850 CTGTCTCTCTGGAGTTGTGCT 59.382 52.381 0.00 0.00 40.29 4.40
3888 4516 1.615883 TGTCTCTCTGGAGTTGTGCTC 59.384 52.381 0.00 0.00 43.39 4.26
3889 4517 1.892474 GTCTCTCTGGAGTTGTGCTCT 59.108 52.381 0.00 0.00 43.62 4.09
3890 4518 2.298729 GTCTCTCTGGAGTTGTGCTCTT 59.701 50.000 0.00 0.00 43.62 2.85
3891 4519 2.298446 TCTCTCTGGAGTTGTGCTCTTG 59.702 50.000 0.00 0.00 43.62 3.02
3892 4520 2.036992 CTCTCTGGAGTTGTGCTCTTGT 59.963 50.000 0.00 0.00 43.62 3.16
3893 4521 2.141517 CTCTGGAGTTGTGCTCTTGTG 58.858 52.381 0.00 0.00 43.62 3.33
3894 4522 0.590195 CTGGAGTTGTGCTCTTGTGC 59.410 55.000 0.00 0.00 43.62 4.57
3895 4523 0.181114 TGGAGTTGTGCTCTTGTGCT 59.819 50.000 0.00 0.00 43.62 4.40
3896 4524 1.312815 GGAGTTGTGCTCTTGTGCTT 58.687 50.000 0.00 0.00 43.62 3.91
3897 4525 1.002033 GGAGTTGTGCTCTTGTGCTTG 60.002 52.381 0.00 0.00 43.62 4.01
3898 4526 1.672881 GAGTTGTGCTCTTGTGCTTGT 59.327 47.619 0.00 0.00 40.98 3.16
3899 4527 1.402968 AGTTGTGCTCTTGTGCTTGTG 59.597 47.619 0.00 0.00 0.00 3.33
3900 4528 0.101040 TTGTGCTCTTGTGCTTGTGC 59.899 50.000 0.00 0.00 40.20 4.57
3909 4537 2.281970 TGCTTGTGCAGGCTCCAG 60.282 61.111 7.75 0.00 45.31 3.86
3910 4538 3.060615 GCTTGTGCAGGCTCCAGG 61.061 66.667 0.00 0.00 39.41 4.45
3911 4539 3.060615 CTTGTGCAGGCTCCAGGC 61.061 66.667 0.00 0.00 41.43 4.85
3919 4547 3.068881 GGCTCCAGGCTACACACA 58.931 61.111 0.00 0.00 41.46 3.72
3920 4548 1.604378 GGCTCCAGGCTACACACAT 59.396 57.895 0.00 0.00 41.46 3.21
3921 4549 0.745845 GGCTCCAGGCTACACACATG 60.746 60.000 0.00 0.00 41.46 3.21
3922 4550 1.372087 GCTCCAGGCTACACACATGC 61.372 60.000 0.00 0.00 38.06 4.06
3923 4551 0.036105 CTCCAGGCTACACACATGCA 60.036 55.000 0.00 0.00 0.00 3.96
3924 4552 0.399833 TCCAGGCTACACACATGCAA 59.600 50.000 0.00 0.00 0.00 4.08
3925 4553 1.004628 TCCAGGCTACACACATGCAAT 59.995 47.619 0.00 0.00 0.00 3.56
3926 4554 1.402968 CCAGGCTACACACATGCAATC 59.597 52.381 0.00 0.00 0.00 2.67
3927 4555 2.362736 CAGGCTACACACATGCAATCT 58.637 47.619 0.00 0.00 0.00 2.40
3928 4556 2.096980 CAGGCTACACACATGCAATCTG 59.903 50.000 0.00 0.00 0.00 2.90
3929 4557 2.026915 AGGCTACACACATGCAATCTGA 60.027 45.455 0.00 0.00 0.00 3.27
3930 4558 2.947652 GGCTACACACATGCAATCTGAT 59.052 45.455 0.00 0.00 0.00 2.90
3931 4559 3.003068 GGCTACACACATGCAATCTGATC 59.997 47.826 0.00 0.00 0.00 2.92
3932 4560 3.875727 GCTACACACATGCAATCTGATCT 59.124 43.478 0.00 0.00 0.00 2.75
3933 4561 4.025061 GCTACACACATGCAATCTGATCTC 60.025 45.833 0.00 0.00 0.00 2.75
3934 4562 3.946606 ACACACATGCAATCTGATCTCA 58.053 40.909 0.00 0.00 0.00 3.27
3935 4563 4.524053 ACACACATGCAATCTGATCTCAT 58.476 39.130 0.00 0.00 0.00 2.90
3936 4564 4.575236 ACACACATGCAATCTGATCTCATC 59.425 41.667 0.00 0.00 0.00 2.92
3937 4565 4.816925 CACACATGCAATCTGATCTCATCT 59.183 41.667 0.00 0.00 0.00 2.90
3938 4566 4.816925 ACACATGCAATCTGATCTCATCTG 59.183 41.667 0.00 0.00 0.00 2.90
3939 4567 5.057149 CACATGCAATCTGATCTCATCTGA 58.943 41.667 0.00 0.00 40.72 3.27
3940 4568 5.703130 CACATGCAATCTGATCTCATCTGAT 59.297 40.000 0.00 1.20 45.97 2.90
3941 4569 5.935206 ACATGCAATCTGATCTCATCTGATC 59.065 40.000 0.00 0.00 44.11 2.92
3942 4570 5.810080 TGCAATCTGATCTCATCTGATCT 57.190 39.130 6.40 0.00 44.11 2.75
3943 4571 5.542779 TGCAATCTGATCTCATCTGATCTG 58.457 41.667 6.40 5.77 44.11 2.90
3948 4576 5.642165 TCTGATCTCATCTGATCTGATCCA 58.358 41.667 14.71 2.30 42.42 3.41
3949 4577 6.075984 TCTGATCTCATCTGATCTGATCCAA 58.924 40.000 14.71 3.62 42.42 3.53
3950 4578 6.726764 TCTGATCTCATCTGATCTGATCCAAT 59.273 38.462 14.71 5.74 42.42 3.16
3951 4579 6.702329 TGATCTCATCTGATCTGATCCAATG 58.298 40.000 14.71 16.08 42.30 2.82
3952 4580 6.497259 TGATCTCATCTGATCTGATCCAATGA 59.503 38.462 21.19 21.19 42.30 2.57
3953 4581 6.099159 TCTCATCTGATCTGATCCAATGAC 57.901 41.667 19.76 0.00 30.70 3.06
3954 4582 4.879598 TCATCTGATCTGATCCAATGACG 58.120 43.478 19.76 7.12 29.59 4.35
3955 4583 3.740631 TCTGATCTGATCCAATGACGG 57.259 47.619 14.71 0.00 0.00 4.79
3956 4584 3.033909 TCTGATCTGATCCAATGACGGT 58.966 45.455 14.71 0.00 0.00 4.83
3957 4585 3.068732 TCTGATCTGATCCAATGACGGTC 59.931 47.826 14.71 0.00 0.00 4.79
3958 4586 3.033909 TGATCTGATCCAATGACGGTCT 58.966 45.455 14.71 0.00 0.00 3.85
3959 4587 3.452264 TGATCTGATCCAATGACGGTCTT 59.548 43.478 14.71 0.00 0.00 3.01
3960 4588 3.981071 TCTGATCCAATGACGGTCTTT 57.019 42.857 9.88 6.57 0.00 2.52
3961 4589 4.286297 TCTGATCCAATGACGGTCTTTT 57.714 40.909 9.88 0.62 0.00 2.27
3962 4590 4.253685 TCTGATCCAATGACGGTCTTTTC 58.746 43.478 9.88 5.11 0.00 2.29
3963 4591 4.020218 TCTGATCCAATGACGGTCTTTTCT 60.020 41.667 9.88 0.00 0.00 2.52
3964 4592 4.002982 TGATCCAATGACGGTCTTTTCTG 58.997 43.478 9.88 0.00 0.00 3.02
3965 4593 2.778299 TCCAATGACGGTCTTTTCTGG 58.222 47.619 9.88 8.07 0.00 3.86
3966 4594 2.370519 TCCAATGACGGTCTTTTCTGGA 59.629 45.455 9.88 10.14 0.00 3.86
3967 4595 3.146066 CCAATGACGGTCTTTTCTGGAA 58.854 45.455 9.88 0.00 0.00 3.53
3968 4596 3.758554 CCAATGACGGTCTTTTCTGGAAT 59.241 43.478 9.88 0.00 0.00 3.01
3969 4597 4.941263 CCAATGACGGTCTTTTCTGGAATA 59.059 41.667 9.88 0.00 0.00 1.75
3970 4598 5.414454 CCAATGACGGTCTTTTCTGGAATAA 59.586 40.000 9.88 0.00 0.00 1.40
3971 4599 6.403636 CCAATGACGGTCTTTTCTGGAATAAG 60.404 42.308 9.88 0.00 0.00 1.73
3972 4600 5.477607 TGACGGTCTTTTCTGGAATAAGA 57.522 39.130 9.88 0.00 0.00 2.10
3973 4601 6.049955 TGACGGTCTTTTCTGGAATAAGAT 57.950 37.500 9.88 0.00 31.25 2.40
3974 4602 6.106673 TGACGGTCTTTTCTGGAATAAGATC 58.893 40.000 9.88 0.00 31.25 2.75
3975 4603 6.070767 TGACGGTCTTTTCTGGAATAAGATCT 60.071 38.462 9.88 0.00 31.25 2.75
3976 4604 6.109359 ACGGTCTTTTCTGGAATAAGATCTG 58.891 40.000 0.00 11.17 31.25 2.90
3977 4605 6.109359 CGGTCTTTTCTGGAATAAGATCTGT 58.891 40.000 0.00 0.00 31.25 3.41
3978 4606 6.256757 CGGTCTTTTCTGGAATAAGATCTGTC 59.743 42.308 0.00 0.00 31.25 3.51
3979 4607 6.540551 GGTCTTTTCTGGAATAAGATCTGTCC 59.459 42.308 11.70 11.70 31.25 4.02
3980 4608 7.106239 GTCTTTTCTGGAATAAGATCTGTCCA 58.894 38.462 17.69 17.69 37.83 4.02
3981 4609 7.065204 GTCTTTTCTGGAATAAGATCTGTCCAC 59.935 40.741 15.70 4.79 35.22 4.02
3982 4610 4.655762 TCTGGAATAAGATCTGTCCACG 57.344 45.455 15.70 12.69 35.22 4.94
3983 4611 4.023980 TCTGGAATAAGATCTGTCCACGT 58.976 43.478 15.70 0.00 35.22 4.49
3984 4612 4.115516 CTGGAATAAGATCTGTCCACGTG 58.884 47.826 15.70 9.08 35.22 4.49
3985 4613 3.513912 TGGAATAAGATCTGTCCACGTGT 59.486 43.478 15.65 0.00 35.22 4.49
3986 4614 4.020573 TGGAATAAGATCTGTCCACGTGTT 60.021 41.667 15.65 1.79 35.22 3.32
3987 4615 4.567159 GGAATAAGATCTGTCCACGTGTTC 59.433 45.833 15.65 7.51 0.00 3.18
3988 4616 2.457366 AAGATCTGTCCACGTGTTCC 57.543 50.000 15.65 2.03 0.00 3.62
3989 4617 1.338107 AGATCTGTCCACGTGTTCCA 58.662 50.000 15.65 6.83 0.00 3.53
3990 4618 1.902508 AGATCTGTCCACGTGTTCCAT 59.097 47.619 15.65 0.00 0.00 3.41
3991 4619 2.093973 AGATCTGTCCACGTGTTCCATC 60.094 50.000 15.65 8.90 0.00 3.51
3992 4620 1.338107 TCTGTCCACGTGTTCCATCT 58.662 50.000 15.65 0.00 0.00 2.90
3993 4621 1.272490 TCTGTCCACGTGTTCCATCTC 59.728 52.381 15.65 0.00 0.00 2.75
3994 4622 1.000843 CTGTCCACGTGTTCCATCTCA 59.999 52.381 15.65 1.18 0.00 3.27
3995 4623 1.414550 TGTCCACGTGTTCCATCTCAA 59.585 47.619 15.65 0.00 0.00 3.02
3996 4624 2.158885 TGTCCACGTGTTCCATCTCAAA 60.159 45.455 15.65 0.00 0.00 2.69
3997 4625 2.875933 GTCCACGTGTTCCATCTCAAAA 59.124 45.455 15.65 0.00 0.00 2.44
3998 4626 3.502211 GTCCACGTGTTCCATCTCAAAAT 59.498 43.478 15.65 0.00 0.00 1.82
3999 4627 4.693566 GTCCACGTGTTCCATCTCAAAATA 59.306 41.667 15.65 0.00 0.00 1.40
4000 4628 4.693566 TCCACGTGTTCCATCTCAAAATAC 59.306 41.667 15.65 0.00 0.00 1.89
4001 4629 4.695455 CCACGTGTTCCATCTCAAAATACT 59.305 41.667 15.65 0.00 0.00 2.12
4002 4630 5.163854 CCACGTGTTCCATCTCAAAATACTC 60.164 44.000 15.65 0.00 0.00 2.59
4003 4631 5.639506 CACGTGTTCCATCTCAAAATACTCT 59.360 40.000 7.58 0.00 0.00 3.24
4004 4632 5.639506 ACGTGTTCCATCTCAAAATACTCTG 59.360 40.000 0.00 0.00 0.00 3.35
4005 4633 5.446473 CGTGTTCCATCTCAAAATACTCTGC 60.446 44.000 0.00 0.00 0.00 4.26
4006 4634 5.645497 GTGTTCCATCTCAAAATACTCTGCT 59.355 40.000 0.00 0.00 0.00 4.24
4007 4635 5.645067 TGTTCCATCTCAAAATACTCTGCTG 59.355 40.000 0.00 0.00 0.00 4.41
4008 4636 4.194640 TCCATCTCAAAATACTCTGCTGC 58.805 43.478 0.00 0.00 0.00 5.25
4009 4637 4.080695 TCCATCTCAAAATACTCTGCTGCT 60.081 41.667 0.00 0.00 0.00 4.24
4010 4638 4.639310 CCATCTCAAAATACTCTGCTGCTT 59.361 41.667 0.00 0.00 0.00 3.91
4011 4639 5.448768 CCATCTCAAAATACTCTGCTGCTTG 60.449 44.000 0.00 0.00 0.00 4.01
4012 4640 4.005650 TCTCAAAATACTCTGCTGCTTGG 58.994 43.478 0.00 0.00 0.00 3.61
4013 4641 2.489329 TCAAAATACTCTGCTGCTTGGC 59.511 45.455 0.00 0.00 0.00 4.52
4014 4642 2.490903 CAAAATACTCTGCTGCTTGGCT 59.509 45.455 0.00 0.00 0.00 4.75
4015 4643 3.634397 AAATACTCTGCTGCTTGGCTA 57.366 42.857 0.00 0.00 0.00 3.93
4016 4644 3.634397 AATACTCTGCTGCTTGGCTAA 57.366 42.857 0.00 0.00 0.00 3.09
4017 4645 3.634397 ATACTCTGCTGCTTGGCTAAA 57.366 42.857 0.00 0.00 0.00 1.85
4018 4646 2.503895 ACTCTGCTGCTTGGCTAAAT 57.496 45.000 0.00 0.00 0.00 1.40
4019 4647 2.363683 ACTCTGCTGCTTGGCTAAATC 58.636 47.619 0.00 0.00 0.00 2.17
4020 4648 1.329906 CTCTGCTGCTTGGCTAAATCG 59.670 52.381 0.00 0.00 0.00 3.34
4021 4649 0.248377 CTGCTGCTTGGCTAAATCGC 60.248 55.000 0.00 0.00 0.00 4.58
4032 4660 4.425577 GGCTAAATCGCCTAATTCATGG 57.574 45.455 0.00 0.00 46.63 3.66
4033 4661 3.821033 GGCTAAATCGCCTAATTCATGGT 59.179 43.478 0.00 0.00 46.63 3.55
4034 4662 4.278419 GGCTAAATCGCCTAATTCATGGTT 59.722 41.667 0.00 0.00 46.63 3.67
4035 4663 5.215160 GCTAAATCGCCTAATTCATGGTTG 58.785 41.667 0.00 0.00 0.00 3.77
4036 4664 4.654091 AAATCGCCTAATTCATGGTTGG 57.346 40.909 0.00 0.00 0.00 3.77
4037 4665 2.051334 TCGCCTAATTCATGGTTGGG 57.949 50.000 8.96 8.96 0.00 4.12
4038 4666 1.032014 CGCCTAATTCATGGTTGGGG 58.968 55.000 13.28 5.96 0.00 4.96
4039 4667 1.409521 CGCCTAATTCATGGTTGGGGA 60.410 52.381 13.28 0.00 0.00 4.81
4040 4668 2.310538 GCCTAATTCATGGTTGGGGAG 58.689 52.381 13.28 0.00 0.00 4.30
4041 4669 2.949447 CCTAATTCATGGTTGGGGAGG 58.051 52.381 0.00 0.00 0.00 4.30
4042 4670 2.424812 CCTAATTCATGGTTGGGGAGGG 60.425 54.545 0.00 0.00 0.00 4.30
4043 4671 1.092549 AATTCATGGTTGGGGAGGGT 58.907 50.000 0.00 0.00 0.00 4.34
4044 4672 1.092549 ATTCATGGTTGGGGAGGGTT 58.907 50.000 0.00 0.00 0.00 4.11
4045 4673 0.114168 TTCATGGTTGGGGAGGGTTG 59.886 55.000 0.00 0.00 0.00 3.77
4046 4674 1.305213 CATGGTTGGGGAGGGTTGG 60.305 63.158 0.00 0.00 0.00 3.77
4047 4675 1.782608 ATGGTTGGGGAGGGTTGGT 60.783 57.895 0.00 0.00 0.00 3.67
4048 4676 2.092904 ATGGTTGGGGAGGGTTGGTG 62.093 60.000 0.00 0.00 0.00 4.17
4049 4677 2.774633 GGTTGGGGAGGGTTGGTGT 61.775 63.158 0.00 0.00 0.00 4.16
4050 4678 1.228459 GTTGGGGAGGGTTGGTGTC 60.228 63.158 0.00 0.00 0.00 3.67
4051 4679 1.698116 TTGGGGAGGGTTGGTGTCA 60.698 57.895 0.00 0.00 0.00 3.58
4052 4680 1.071314 TTGGGGAGGGTTGGTGTCAT 61.071 55.000 0.00 0.00 0.00 3.06
4053 4681 1.000896 GGGGAGGGTTGGTGTCATG 60.001 63.158 0.00 0.00 0.00 3.07
4054 4682 1.000896 GGGAGGGTTGGTGTCATGG 60.001 63.158 0.00 0.00 0.00 3.66
4055 4683 1.678970 GGAGGGTTGGTGTCATGGC 60.679 63.158 0.00 0.00 0.00 4.40
4056 4684 1.074775 GAGGGTTGGTGTCATGGCA 59.925 57.895 0.00 0.00 0.00 4.92
4057 4685 1.228552 AGGGTTGGTGTCATGGCAC 60.229 57.895 22.34 22.34 38.56 5.01
4063 4691 2.953821 GTGTCATGGCACCCGTTG 59.046 61.111 19.95 0.00 33.53 4.10
4064 4692 2.282110 TGTCATGGCACCCGTTGG 60.282 61.111 0.00 0.00 37.80 3.77
4074 4702 3.399181 CCCGTTGGGCTCCTAGCA 61.399 66.667 0.78 0.00 44.75 3.49
4075 4703 2.187946 CCGTTGGGCTCCTAGCAG 59.812 66.667 0.78 0.00 44.75 4.24
4076 4704 2.187946 CGTTGGGCTCCTAGCAGG 59.812 66.667 0.78 0.00 44.75 4.85
4077 4705 2.660064 CGTTGGGCTCCTAGCAGGT 61.660 63.158 0.78 0.00 44.75 4.00
4078 4706 1.327690 CGTTGGGCTCCTAGCAGGTA 61.328 60.000 0.78 0.00 44.75 3.08
4079 4707 1.132500 GTTGGGCTCCTAGCAGGTAT 58.868 55.000 0.78 0.00 44.75 2.73
4080 4708 1.070914 GTTGGGCTCCTAGCAGGTATC 59.929 57.143 0.78 0.00 44.75 2.24
4081 4709 0.264657 TGGGCTCCTAGCAGGTATCA 59.735 55.000 0.78 0.00 44.75 2.15
4082 4710 1.343985 TGGGCTCCTAGCAGGTATCAA 60.344 52.381 0.78 0.00 44.75 2.57
4083 4711 1.768870 GGGCTCCTAGCAGGTATCAAA 59.231 52.381 0.78 0.00 44.75 2.69
4084 4712 2.224402 GGGCTCCTAGCAGGTATCAAAG 60.224 54.545 0.78 0.00 44.75 2.77
4085 4713 2.224402 GGCTCCTAGCAGGTATCAAAGG 60.224 54.545 0.78 0.00 44.75 3.11
4086 4714 2.700897 GCTCCTAGCAGGTATCAAAGGA 59.299 50.000 2.68 0.00 41.89 3.36
4087 4715 3.134804 GCTCCTAGCAGGTATCAAAGGAA 59.865 47.826 2.68 0.00 41.89 3.36
4088 4716 4.202409 GCTCCTAGCAGGTATCAAAGGAAT 60.202 45.833 2.68 0.00 41.89 3.01
4089 4717 5.688766 GCTCCTAGCAGGTATCAAAGGAATT 60.689 44.000 2.68 0.00 41.89 2.17
4090 4718 6.327386 TCCTAGCAGGTATCAAAGGAATTT 57.673 37.500 2.68 0.00 36.53 1.82
4091 4719 6.357367 TCCTAGCAGGTATCAAAGGAATTTC 58.643 40.000 2.68 0.00 36.53 2.17
4092 4720 6.069673 TCCTAGCAGGTATCAAAGGAATTTCA 60.070 38.462 0.00 0.00 36.53 2.69
4093 4721 6.774656 CCTAGCAGGTATCAAAGGAATTTCAT 59.225 38.462 0.00 0.00 0.00 2.57
4094 4722 7.286316 CCTAGCAGGTATCAAAGGAATTTCATT 59.714 37.037 0.00 0.00 0.00 2.57
4095 4723 6.870769 AGCAGGTATCAAAGGAATTTCATTG 58.129 36.000 0.00 0.00 0.00 2.82
4096 4724 6.438425 AGCAGGTATCAAAGGAATTTCATTGT 59.562 34.615 1.81 0.00 0.00 2.71
4097 4725 6.753744 GCAGGTATCAAAGGAATTTCATTGTC 59.246 38.462 1.81 0.00 0.00 3.18
4098 4726 6.968904 CAGGTATCAAAGGAATTTCATTGTCG 59.031 38.462 1.81 0.21 0.00 4.35
4099 4727 6.095440 AGGTATCAAAGGAATTTCATTGTCGG 59.905 38.462 1.81 0.00 0.00 4.79
4100 4728 4.782019 TCAAAGGAATTTCATTGTCGGG 57.218 40.909 1.81 0.00 0.00 5.14
4101 4729 4.402829 TCAAAGGAATTTCATTGTCGGGA 58.597 39.130 1.81 0.00 0.00 5.14
4102 4730 4.458989 TCAAAGGAATTTCATTGTCGGGAG 59.541 41.667 1.81 0.00 0.00 4.30
4103 4731 3.004752 AGGAATTTCATTGTCGGGAGG 57.995 47.619 0.00 0.00 0.00 4.30
4104 4732 2.576191 AGGAATTTCATTGTCGGGAGGA 59.424 45.455 0.00 0.00 0.00 3.71
4105 4733 2.683362 GGAATTTCATTGTCGGGAGGAC 59.317 50.000 0.00 0.00 46.27 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.489938 TACTCCAGTTGAATGGCACC 57.510 50.000 0.00 0.00 40.41 5.01
16 17 5.395768 GCAGTCCTACATACTCCAGTTGAAT 60.396 44.000 0.00 0.00 0.00 2.57
19 20 3.449018 AGCAGTCCTACATACTCCAGTTG 59.551 47.826 0.00 0.00 0.00 3.16
25 26 7.175816 TCAGATATTGAGCAGTCCTACATACTC 59.824 40.741 0.00 0.00 0.00 2.59
28 29 7.524532 GCTTCAGATATTGAGCAGTCCTACATA 60.525 40.741 0.00 0.00 37.07 2.29
77 78 5.909621 TCCATACAGTAGGTCAAGTACAC 57.090 43.478 0.00 0.00 0.00 2.90
155 159 9.774742 CTAGTACAGTAATTGGCATTTTTCTTC 57.225 33.333 0.00 0.00 0.00 2.87
181 185 5.959618 ACCAGAACCTTGCAAAATACTAC 57.040 39.130 0.00 0.00 0.00 2.73
194 231 5.356426 GCAATTGTTTACAAACCAGAACCT 58.644 37.500 7.40 0.00 39.55 3.50
205 242 5.278907 CCATCTCAACAGGCAATTGTTTACA 60.279 40.000 7.40 0.00 39.17 2.41
221 258 0.107993 CTTCGCTCAGGCCATCTCAA 60.108 55.000 5.01 0.00 34.44 3.02
222 259 0.972471 TCTTCGCTCAGGCCATCTCA 60.972 55.000 5.01 0.00 34.44 3.27
223 260 0.176680 TTCTTCGCTCAGGCCATCTC 59.823 55.000 5.01 0.00 34.44 2.75
224 261 0.177604 CTTCTTCGCTCAGGCCATCT 59.822 55.000 5.01 0.00 34.44 2.90
225 262 1.435408 GCTTCTTCGCTCAGGCCATC 61.435 60.000 5.01 0.00 34.44 3.51
226 263 1.451028 GCTTCTTCGCTCAGGCCAT 60.451 57.895 5.01 0.00 34.44 4.40
227 264 2.046892 GCTTCTTCGCTCAGGCCA 60.047 61.111 5.01 0.00 34.44 5.36
228 265 1.672356 TTGCTTCTTCGCTCAGGCC 60.672 57.895 0.00 0.00 34.44 5.19
250 287 3.046087 CGTCAGGTGCACAGCAGG 61.046 66.667 20.43 2.85 40.08 4.85
251 288 3.046087 CCGTCAGGTGCACAGCAG 61.046 66.667 20.43 4.95 40.08 4.24
252 289 4.624364 CCCGTCAGGTGCACAGCA 62.624 66.667 20.43 0.00 35.12 4.41
259 296 1.276421 AGTGAATTCTCCCGTCAGGTG 59.724 52.381 7.05 0.00 36.75 4.00
260 297 1.276421 CAGTGAATTCTCCCGTCAGGT 59.724 52.381 7.05 0.00 36.75 4.00
267 315 3.186702 GGAGTAGCAGTGAATTCTCCC 57.813 52.381 7.05 0.00 36.46 4.30
279 327 0.627451 TAGGAACGGAGGGAGTAGCA 59.373 55.000 0.00 0.00 0.00 3.49
286 334 4.957684 ACAGATATTTAGGAACGGAGGG 57.042 45.455 0.00 0.00 0.00 4.30
287 335 7.625828 AAAAACAGATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
324 472 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
325 473 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
326 474 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
328 476 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
329 477 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
330 478 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
331 479 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
376 524 9.170734 GAACTACCACATACGGATGTATATAGA 57.829 37.037 22.62 5.04 44.82 1.98
377 525 8.953313 TGAACTACCACATACGGATGTATATAG 58.047 37.037 14.23 16.35 44.82 1.31
381 529 6.665992 ATGAACTACCACATACGGATGTAT 57.334 37.500 14.23 7.46 44.82 2.29
384 532 5.815222 TCAAATGAACTACCACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
385 533 5.984725 TCAAATGAACTACCACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
387 535 6.311723 GTTTCAAATGAACTACCACATACGG 58.688 40.000 0.00 0.00 33.13 4.02
390 538 7.458397 AGAGGTTTCAAATGAACTACCACATA 58.542 34.615 15.74 0.00 37.38 2.29
395 543 9.678941 CTTTTTAGAGGTTTCAAATGAACTACC 57.321 33.333 8.37 8.37 35.94 3.18
398 546 8.966868 TGTCTTTTTAGAGGTTTCAAATGAACT 58.033 29.630 0.00 0.00 33.13 3.01
399 547 9.581099 TTGTCTTTTTAGAGGTTTCAAATGAAC 57.419 29.630 0.00 0.00 33.13 3.18
416 564 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
417 565 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
418 566 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
420 568 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
422 570 5.397559 CCTCCCTCCGTTCCTAAATATTTGT 60.398 44.000 11.05 0.00 0.00 2.83
423 571 5.063880 CCTCCCTCCGTTCCTAAATATTTG 58.936 45.833 11.05 1.40 0.00 2.32
424 572 4.104261 CCCTCCCTCCGTTCCTAAATATTT 59.896 45.833 5.89 5.89 0.00 1.40
425 573 3.651423 CCCTCCCTCCGTTCCTAAATATT 59.349 47.826 0.00 0.00 0.00 1.28
438 603 2.547990 TCAAAACTACTCCCTCCCTCC 58.452 52.381 0.00 0.00 0.00 4.30
439 604 4.034410 AGATCAAAACTACTCCCTCCCTC 58.966 47.826 0.00 0.00 0.00 4.30
446 611 7.971183 AGTCAAGAAAGATCAAAACTACTCC 57.029 36.000 0.00 0.00 0.00 3.85
447 612 8.831550 ACAAGTCAAGAAAGATCAAAACTACTC 58.168 33.333 0.00 0.00 0.00 2.59
547 717 9.170890 TCAAAACATCTTATATACTCCCTCCAT 57.829 33.333 0.00 0.00 0.00 3.41
548 718 8.561536 TCAAAACATCTTATATACTCCCTCCA 57.438 34.615 0.00 0.00 0.00 3.86
595 765 9.944663 GTGTTTATTCACTCATTTCAAACTGTA 57.055 29.630 0.00 0.00 35.68 2.74
596 766 8.465999 TGTGTTTATTCACTCATTTCAAACTGT 58.534 29.630 0.00 0.00 38.90 3.55
597 767 8.745837 GTGTGTTTATTCACTCATTTCAAACTG 58.254 33.333 0.00 0.00 38.90 3.16
598 768 8.686334 AGTGTGTTTATTCACTCATTTCAAACT 58.314 29.630 0.00 0.00 40.28 2.66
659 830 2.257207 TCTCCCTCCGTTCACAAAGAT 58.743 47.619 0.00 0.00 0.00 2.40
660 831 1.712056 TCTCCCTCCGTTCACAAAGA 58.288 50.000 0.00 0.00 0.00 2.52
661 832 2.543777 TTCTCCCTCCGTTCACAAAG 57.456 50.000 0.00 0.00 0.00 2.77
709 943 1.603326 GGGTGGCATGCTTTTGTTTTG 59.397 47.619 18.92 0.00 0.00 2.44
714 948 2.098426 AACCGGGTGGCATGCTTTTG 62.098 55.000 18.92 4.16 39.70 2.44
730 964 6.418141 CGTTTTCACATGGAAATTTTGAACC 58.582 36.000 9.31 0.00 44.59 3.62
746 980 3.920412 GGCTCAAAATCATCCGTTTTCAC 59.080 43.478 0.00 0.00 0.00 3.18
753 988 4.931002 ACAAATTTGGCTCAAAATCATCCG 59.069 37.500 21.74 0.00 36.90 4.18
783 1018 4.173036 TGGAATGCGATTTTCAAGGTTC 57.827 40.909 0.00 0.00 0.00 3.62
784 1019 4.675146 CGATGGAATGCGATTTTCAAGGTT 60.675 41.667 0.00 0.00 0.00 3.50
785 1020 3.181497 CGATGGAATGCGATTTTCAAGGT 60.181 43.478 0.00 0.00 0.00 3.50
797 1032 3.065786 TGATTTCTGAAGCGATGGAATGC 59.934 43.478 0.00 0.00 0.00 3.56
807 1042 6.551385 TTTCTTCTCTGTGATTTCTGAAGC 57.449 37.500 0.00 0.00 33.21 3.86
818 1056 7.227512 ACAAGAGTGGTATTTTTCTTCTCTGTG 59.772 37.037 0.00 0.00 32.31 3.66
827 1065 6.149640 GGAGAGGAACAAGAGTGGTATTTTTC 59.850 42.308 0.00 0.00 0.00 2.29
839 1077 3.551635 AGAAGAGGGAGAGGAACAAGA 57.448 47.619 0.00 0.00 0.00 3.02
845 1083 3.691603 CGGGAAATAGAAGAGGGAGAGGA 60.692 52.174 0.00 0.00 0.00 3.71
860 1098 4.462280 GGCGTCGGACCGGGAAAT 62.462 66.667 15.25 0.00 0.00 2.17
867 1105 4.090588 TGGGAATGGCGTCGGACC 62.091 66.667 1.91 0.00 0.00 4.46
906 1169 2.111384 GAGAGGTTAGCATGTGGAGGA 58.889 52.381 0.00 0.00 0.00 3.71
931 1194 4.459089 GCTGGGGCGGTGAGAGAC 62.459 72.222 0.00 0.00 0.00 3.36
960 1223 3.397613 GAAGGGAGATGGCGCTGCT 62.398 63.158 7.64 1.50 0.00 4.24
1270 1533 3.036429 GCATCTCCCCGAACAGCCT 62.036 63.158 0.00 0.00 0.00 4.58
1485 1748 1.898094 AGCAGCGCCATCAAACACA 60.898 52.632 2.29 0.00 0.00 3.72
1822 2085 3.512724 CACTGGATGGCATTCTTCCTTTT 59.487 43.478 7.41 0.00 39.63 2.27
1869 2132 3.635268 CTTCACCTGCCCCTCCTGC 62.635 68.421 0.00 0.00 0.00 4.85
1927 2191 0.543277 ACATGTCCATCAGCACGGAT 59.457 50.000 0.00 0.00 32.83 4.18
1962 2226 0.381801 CAAAGTCTGCAAACACGCCT 59.618 50.000 0.00 0.00 0.00 5.52
2129 2393 0.736325 CCATGACACGACGTTCCTCC 60.736 60.000 0.00 0.00 0.00 4.30
2325 2589 1.318158 GCCTCAGCCATTTGTCCTGG 61.318 60.000 0.00 0.00 36.81 4.45
2421 2685 4.923710 TCCATCGGCATCGTCGCG 62.924 66.667 0.00 0.00 37.69 5.87
2657 2922 3.618780 GACCTCCACCCAGCTGCAG 62.619 68.421 10.11 10.11 0.00 4.41
2751 3016 4.056125 CCTGCTCTCCACGTCGCA 62.056 66.667 0.00 0.00 0.00 5.10
2783 3048 1.895020 GACGACCCAGCATGTACCCA 61.895 60.000 0.00 0.00 0.00 4.51
2944 3235 0.327000 CCCTGATCACCTCCCTCCTT 60.327 60.000 0.00 0.00 0.00 3.36
3046 3337 1.301479 GAACCGGTTGGCGTCTCTT 60.301 57.895 27.87 0.00 39.70 2.85
3049 3340 3.552384 TGGAACCGGTTGGCGTCT 61.552 61.111 27.87 0.00 39.70 4.18
3118 3409 4.883083 TCAGTGTGAGTTTAGTTAGCCAG 58.117 43.478 0.00 0.00 0.00 4.85
3124 3415 4.335594 GCCTGTTTCAGTGTGAGTTTAGTT 59.664 41.667 0.00 0.00 0.00 2.24
3128 3419 2.423538 GTGCCTGTTTCAGTGTGAGTTT 59.576 45.455 0.00 0.00 0.00 2.66
3213 3516 0.804364 TCTTGATGACACGCCAATGC 59.196 50.000 0.00 0.00 0.00 3.56
3310 3634 2.035783 GGCAGTCCCCAAACCCTC 59.964 66.667 0.00 0.00 0.00 4.30
3312 3643 2.206182 ATACGGCAGTCCCCAAACCC 62.206 60.000 0.00 0.00 0.00 4.11
3314 3645 1.654023 GCATACGGCAGTCCCCAAAC 61.654 60.000 0.00 0.00 43.97 2.93
3328 3659 2.162408 GCTCAACTTCACTTGGGCATAC 59.838 50.000 0.00 0.00 45.59 2.39
3354 3685 0.532115 ACCAAATCAGCGCCCAAATC 59.468 50.000 2.29 0.00 0.00 2.17
3357 3688 1.228398 TGACCAAATCAGCGCCCAA 60.228 52.632 2.29 0.00 31.91 4.12
3387 3725 2.049185 ACACGAGATCGAGCTGCCT 61.049 57.895 8.50 0.00 43.02 4.75
3388 3726 1.875813 CACACGAGATCGAGCTGCC 60.876 63.158 8.50 0.00 43.02 4.85
3389 3727 0.456824 TTCACACGAGATCGAGCTGC 60.457 55.000 8.50 0.00 43.02 5.25
3400 3738 2.176045 TGCCTCCTTATCTTCACACGA 58.824 47.619 0.00 0.00 0.00 4.35
3425 4014 8.013072 ACCTGGCTAATCCATATATAGATGCTA 58.987 37.037 1.61 0.00 45.50 3.49
3431 4020 7.584122 ACGTACCTGGCTAATCCATATATAG 57.416 40.000 0.00 0.00 45.50 1.31
3439 4028 2.099756 ACGTTACGTACCTGGCTAATCC 59.900 50.000 9.22 0.00 38.73 3.01
3440 4029 3.427161 ACGTTACGTACCTGGCTAATC 57.573 47.619 9.22 0.00 38.73 1.75
3443 4032 2.095213 CGTTACGTTACGTACCTGGCTA 59.905 50.000 17.53 0.00 42.13 3.93
3459 4086 8.225107 TCAAGTAAATTCAGCAATGTACGTTAC 58.775 33.333 0.00 0.00 37.66 2.50
3464 4091 7.816640 TCCTTCAAGTAAATTCAGCAATGTAC 58.183 34.615 0.00 0.00 34.06 2.90
3484 4111 2.428530 GGGGCATTCAACATTCTCCTTC 59.571 50.000 0.00 0.00 0.00 3.46
3485 4112 2.460669 GGGGCATTCAACATTCTCCTT 58.539 47.619 0.00 0.00 0.00 3.36
3486 4113 1.683011 CGGGGCATTCAACATTCTCCT 60.683 52.381 0.00 0.00 0.00 3.69
3516 4143 1.974236 CAGTGGTCTCCAAGAGGAACT 59.026 52.381 0.00 0.00 45.19 3.01
3517 4144 1.002544 CCAGTGGTCTCCAAGAGGAAC 59.997 57.143 0.00 0.00 45.19 3.62
3518 4145 1.352083 CCAGTGGTCTCCAAGAGGAA 58.648 55.000 0.00 0.00 45.19 3.36
3519 4146 0.191064 ACCAGTGGTCTCCAAGAGGA 59.809 55.000 9.70 0.00 43.21 3.71
3520 4147 2.765352 ACCAGTGGTCTCCAAGAGG 58.235 57.895 9.70 0.00 34.18 3.69
3530 4157 2.700897 GCATATCAGTAGGACCAGTGGT 59.299 50.000 16.70 16.70 39.44 4.16
3531 4158 2.700371 TGCATATCAGTAGGACCAGTGG 59.300 50.000 7.91 7.91 0.00 4.00
3532 4159 4.613925 ATGCATATCAGTAGGACCAGTG 57.386 45.455 0.00 0.00 0.00 3.66
3533 4160 4.202398 CCAATGCATATCAGTAGGACCAGT 60.202 45.833 0.00 0.00 0.00 4.00
3534 4161 4.321718 CCAATGCATATCAGTAGGACCAG 58.678 47.826 0.00 0.00 0.00 4.00
3535 4162 3.496692 GCCAATGCATATCAGTAGGACCA 60.497 47.826 0.00 0.00 37.47 4.02
3536 4163 3.077359 GCCAATGCATATCAGTAGGACC 58.923 50.000 0.00 0.00 37.47 4.46
3537 4164 3.077359 GGCCAATGCATATCAGTAGGAC 58.923 50.000 0.00 0.00 40.13 3.85
3538 4165 2.981784 AGGCCAATGCATATCAGTAGGA 59.018 45.455 5.01 0.00 40.13 2.94
3539 4166 3.079578 CAGGCCAATGCATATCAGTAGG 58.920 50.000 5.01 0.00 40.13 3.18
3540 4167 2.486982 GCAGGCCAATGCATATCAGTAG 59.513 50.000 11.92 0.00 45.77 2.57
3541 4168 2.507484 GCAGGCCAATGCATATCAGTA 58.493 47.619 11.92 0.00 45.77 2.74
3542 4169 1.325355 GCAGGCCAATGCATATCAGT 58.675 50.000 11.92 0.00 45.77 3.41
3550 4177 3.970746 AAGGAGGGCAGGCCAATGC 62.971 63.158 16.94 7.04 45.74 3.56
3551 4178 2.056223 CAAGGAGGGCAGGCCAATG 61.056 63.158 16.94 4.43 37.98 2.82
3552 4179 2.361771 CAAGGAGGGCAGGCCAAT 59.638 61.111 16.94 1.25 37.98 3.16
3553 4180 4.684134 GCAAGGAGGGCAGGCCAA 62.684 66.667 16.94 0.00 37.98 4.52
3556 4183 4.357279 ACAGCAAGGAGGGCAGGC 62.357 66.667 0.00 0.00 0.00 4.85
3557 4184 2.045536 GACAGCAAGGAGGGCAGG 60.046 66.667 0.00 0.00 0.00 4.85
3558 4185 1.078567 GAGACAGCAAGGAGGGCAG 60.079 63.158 0.00 0.00 0.00 4.85
3559 4186 1.537397 AGAGACAGCAAGGAGGGCA 60.537 57.895 0.00 0.00 0.00 5.36
3560 4187 1.078567 CAGAGACAGCAAGGAGGGC 60.079 63.158 0.00 0.00 0.00 5.19
3561 4188 0.248843 GACAGAGACAGCAAGGAGGG 59.751 60.000 0.00 0.00 0.00 4.30
3562 4189 1.067000 CAGACAGAGACAGCAAGGAGG 60.067 57.143 0.00 0.00 0.00 4.30
3563 4190 1.067000 CCAGACAGAGACAGCAAGGAG 60.067 57.143 0.00 0.00 0.00 3.69
3564 4191 0.972134 CCAGACAGAGACAGCAAGGA 59.028 55.000 0.00 0.00 0.00 3.36
3565 4192 0.673022 GCCAGACAGAGACAGCAAGG 60.673 60.000 0.00 0.00 0.00 3.61
3566 4193 0.321021 AGCCAGACAGAGACAGCAAG 59.679 55.000 0.00 0.00 0.00 4.01
3567 4194 0.761187 AAGCCAGACAGAGACAGCAA 59.239 50.000 0.00 0.00 0.00 3.91
3568 4195 0.319728 GAAGCCAGACAGAGACAGCA 59.680 55.000 0.00 0.00 0.00 4.41
3569 4196 0.607620 AGAAGCCAGACAGAGACAGC 59.392 55.000 0.00 0.00 0.00 4.40
3572 4199 2.418060 GCCTAAGAAGCCAGACAGAGAC 60.418 54.545 0.00 0.00 0.00 3.36
3632 4259 1.669760 TAAACCGCGAGTTGCTGGG 60.670 57.895 8.23 6.49 43.27 4.45
3668 4295 1.203262 AGGTAAGGGGTAGTGTCAGCA 60.203 52.381 0.00 0.00 0.00 4.41
3669 4296 1.569653 AGGTAAGGGGTAGTGTCAGC 58.430 55.000 0.00 0.00 0.00 4.26
3670 4297 3.700038 CACTAGGTAAGGGGTAGTGTCAG 59.300 52.174 0.00 0.00 39.13 3.51
3671 4298 3.705051 CACTAGGTAAGGGGTAGTGTCA 58.295 50.000 0.00 0.00 39.13 3.58
3683 4310 0.320946 GGCGGCAACACACTAGGTAA 60.321 55.000 3.07 0.00 0.00 2.85
3690 4317 1.369568 GTTAACGGCGGCAACACAC 60.370 57.895 13.24 0.00 0.00 3.82
3700 4327 2.224784 ACCTGAACATTTCGTTAACGGC 59.775 45.455 26.51 9.03 38.19 5.68
3729 4356 8.514504 AGATTTGAAAGATTTATAGGGGGTCAT 58.485 33.333 0.00 0.00 0.00 3.06
3750 4377 9.646427 GACGCATATATAAAAGAGGAGAGATTT 57.354 33.333 0.00 0.00 0.00 2.17
3752 4379 7.617723 AGGACGCATATATAAAAGAGGAGAGAT 59.382 37.037 0.00 0.00 0.00 2.75
3754 4381 7.164230 AGGACGCATATATAAAAGAGGAGAG 57.836 40.000 0.00 0.00 0.00 3.20
3756 4383 7.155328 ACAAGGACGCATATATAAAAGAGGAG 58.845 38.462 0.00 0.00 0.00 3.69
3758 4385 7.116948 CAGACAAGGACGCATATATAAAAGAGG 59.883 40.741 0.00 0.00 0.00 3.69
3759 4386 7.867909 TCAGACAAGGACGCATATATAAAAGAG 59.132 37.037 0.00 0.00 0.00 2.85
3830 4458 0.894184 TCCACCACTCTCGTCAGGAC 60.894 60.000 0.00 0.00 0.00 3.85
3831 4459 0.039764 ATCCACCACTCTCGTCAGGA 59.960 55.000 0.00 0.00 0.00 3.86
3832 4460 0.898320 AATCCACCACTCTCGTCAGG 59.102 55.000 0.00 0.00 0.00 3.86
3833 4461 2.001812 CAATCCACCACTCTCGTCAG 57.998 55.000 0.00 0.00 0.00 3.51
3834 4462 0.037326 GCAATCCACCACTCTCGTCA 60.037 55.000 0.00 0.00 0.00 4.35
3835 4463 0.247736 AGCAATCCACCACTCTCGTC 59.752 55.000 0.00 0.00 0.00 4.20
3836 4464 0.247736 GAGCAATCCACCACTCTCGT 59.752 55.000 0.00 0.00 0.00 4.18
3837 4465 0.247460 TGAGCAATCCACCACTCTCG 59.753 55.000 0.00 0.00 0.00 4.04
3838 4466 2.706339 ATGAGCAATCCACCACTCTC 57.294 50.000 0.00 0.00 0.00 3.20
3839 4467 3.446442 AAATGAGCAATCCACCACTCT 57.554 42.857 0.00 0.00 0.00 3.24
3840 4468 5.504665 CGAATAAATGAGCAATCCACCACTC 60.505 44.000 0.00 0.00 0.00 3.51
3841 4469 4.336433 CGAATAAATGAGCAATCCACCACT 59.664 41.667 0.00 0.00 0.00 4.00
3842 4470 4.498009 CCGAATAAATGAGCAATCCACCAC 60.498 45.833 0.00 0.00 0.00 4.16
3843 4471 3.631686 CCGAATAAATGAGCAATCCACCA 59.368 43.478 0.00 0.00 0.00 4.17
3844 4472 3.004734 CCCGAATAAATGAGCAATCCACC 59.995 47.826 0.00 0.00 0.00 4.61
3845 4473 3.550842 GCCCGAATAAATGAGCAATCCAC 60.551 47.826 0.00 0.00 0.00 4.02
3846 4474 2.622942 GCCCGAATAAATGAGCAATCCA 59.377 45.455 0.00 0.00 0.00 3.41
3847 4475 2.887152 AGCCCGAATAAATGAGCAATCC 59.113 45.455 0.00 0.00 0.00 3.01
3848 4476 3.316308 ACAGCCCGAATAAATGAGCAATC 59.684 43.478 0.00 0.00 0.00 2.67
3849 4477 3.290710 ACAGCCCGAATAAATGAGCAAT 58.709 40.909 0.00 0.00 0.00 3.56
3850 4478 2.682856 GACAGCCCGAATAAATGAGCAA 59.317 45.455 0.00 0.00 0.00 3.91
3851 4479 2.092968 AGACAGCCCGAATAAATGAGCA 60.093 45.455 0.00 0.00 0.00 4.26
3852 4480 2.545946 GAGACAGCCCGAATAAATGAGC 59.454 50.000 0.00 0.00 0.00 4.26
3853 4481 4.054671 GAGAGACAGCCCGAATAAATGAG 58.945 47.826 0.00 0.00 0.00 2.90
3854 4482 3.706594 AGAGAGACAGCCCGAATAAATGA 59.293 43.478 0.00 0.00 0.00 2.57
3855 4483 3.806521 CAGAGAGACAGCCCGAATAAATG 59.193 47.826 0.00 0.00 0.00 2.32
3856 4484 3.181461 CCAGAGAGACAGCCCGAATAAAT 60.181 47.826 0.00 0.00 0.00 1.40
3857 4485 2.168521 CCAGAGAGACAGCCCGAATAAA 59.831 50.000 0.00 0.00 0.00 1.40
3858 4486 1.757118 CCAGAGAGACAGCCCGAATAA 59.243 52.381 0.00 0.00 0.00 1.40
3859 4487 1.063942 TCCAGAGAGACAGCCCGAATA 60.064 52.381 0.00 0.00 0.00 1.75
3860 4488 0.324738 TCCAGAGAGACAGCCCGAAT 60.325 55.000 0.00 0.00 0.00 3.34
3861 4489 0.967887 CTCCAGAGAGACAGCCCGAA 60.968 60.000 0.00 0.00 43.39 4.30
3862 4490 1.379176 CTCCAGAGAGACAGCCCGA 60.379 63.158 0.00 0.00 43.39 5.14
3863 4491 1.254284 AACTCCAGAGAGACAGCCCG 61.254 60.000 0.70 0.00 43.39 6.13
3864 4492 0.248843 CAACTCCAGAGAGACAGCCC 59.751 60.000 0.70 0.00 43.39 5.19
3865 4493 0.972883 ACAACTCCAGAGAGACAGCC 59.027 55.000 0.70 0.00 43.39 4.85
3866 4494 1.938926 GCACAACTCCAGAGAGACAGC 60.939 57.143 0.70 0.00 43.39 4.40
3867 4495 1.617850 AGCACAACTCCAGAGAGACAG 59.382 52.381 0.70 0.00 43.39 3.51
3868 4496 1.615883 GAGCACAACTCCAGAGAGACA 59.384 52.381 0.70 0.00 43.39 3.41
3869 4497 2.362169 GAGCACAACTCCAGAGAGAC 57.638 55.000 0.70 0.00 43.39 3.36
3878 4506 1.672881 ACAAGCACAAGAGCACAACTC 59.327 47.619 0.00 0.00 46.66 3.01
3879 4507 1.402968 CACAAGCACAAGAGCACAACT 59.597 47.619 0.00 0.00 36.85 3.16
3880 4508 1.831343 CACAAGCACAAGAGCACAAC 58.169 50.000 0.00 0.00 36.85 3.32
3881 4509 0.101040 GCACAAGCACAAGAGCACAA 59.899 50.000 0.00 0.00 41.58 3.33
3882 4510 1.729276 GCACAAGCACAAGAGCACA 59.271 52.632 0.00 0.00 41.58 4.57
3883 4511 4.622364 GCACAAGCACAAGAGCAC 57.378 55.556 0.00 0.00 41.58 4.40
3893 4521 3.060615 CCTGGAGCCTGCACAAGC 61.061 66.667 0.00 0.00 42.57 4.01
3894 4522 2.189191 TAGCCTGGAGCCTGCACAAG 62.189 60.000 0.00 0.00 45.47 3.16
3895 4523 2.223443 TAGCCTGGAGCCTGCACAA 61.223 57.895 0.00 0.00 45.47 3.33
3896 4524 2.607442 TAGCCTGGAGCCTGCACA 60.607 61.111 0.00 0.00 45.47 4.57
3897 4525 2.124942 GTAGCCTGGAGCCTGCAC 60.125 66.667 0.00 0.00 45.47 4.57
3898 4526 2.607442 TGTAGCCTGGAGCCTGCA 60.607 61.111 0.00 0.00 45.47 4.41
3899 4527 2.124942 GTGTAGCCTGGAGCCTGC 60.125 66.667 0.00 0.00 45.47 4.85
3900 4528 1.078848 GTGTGTAGCCTGGAGCCTG 60.079 63.158 0.00 0.00 45.47 4.85
3901 4529 0.911525 ATGTGTGTAGCCTGGAGCCT 60.912 55.000 0.00 0.00 45.47 4.58
3902 4530 0.745845 CATGTGTGTAGCCTGGAGCC 60.746 60.000 0.00 0.00 45.47 4.70
3903 4531 1.372087 GCATGTGTGTAGCCTGGAGC 61.372 60.000 0.00 0.00 44.25 4.70
3904 4532 0.036105 TGCATGTGTGTAGCCTGGAG 60.036 55.000 0.00 0.00 0.00 3.86
3905 4533 0.399833 TTGCATGTGTGTAGCCTGGA 59.600 50.000 0.00 0.00 0.00 3.86
3906 4534 1.402968 GATTGCATGTGTGTAGCCTGG 59.597 52.381 0.00 0.00 0.00 4.45
3907 4535 2.096980 CAGATTGCATGTGTGTAGCCTG 59.903 50.000 0.00 0.00 0.00 4.85
3908 4536 2.026915 TCAGATTGCATGTGTGTAGCCT 60.027 45.455 0.00 0.00 0.00 4.58
3909 4537 2.358957 TCAGATTGCATGTGTGTAGCC 58.641 47.619 0.00 0.00 0.00 3.93
3910 4538 3.875727 AGATCAGATTGCATGTGTGTAGC 59.124 43.478 0.00 0.00 0.00 3.58
3911 4539 5.114081 TGAGATCAGATTGCATGTGTGTAG 58.886 41.667 0.00 0.00 0.00 2.74
3912 4540 5.088680 TGAGATCAGATTGCATGTGTGTA 57.911 39.130 0.00 0.00 0.00 2.90
3913 4541 3.946606 TGAGATCAGATTGCATGTGTGT 58.053 40.909 0.00 0.00 0.00 3.72
3914 4542 4.816925 AGATGAGATCAGATTGCATGTGTG 59.183 41.667 0.00 0.00 0.00 3.82
3915 4543 4.816925 CAGATGAGATCAGATTGCATGTGT 59.183 41.667 12.08 0.00 0.00 3.72
3916 4544 5.057149 TCAGATGAGATCAGATTGCATGTG 58.943 41.667 13.29 13.29 33.19 3.21
3917 4545 5.291905 TCAGATGAGATCAGATTGCATGT 57.708 39.130 0.00 0.00 0.00 3.21
3918 4546 6.091986 CAGATCAGATGAGATCAGATTGCATG 59.908 42.308 6.70 0.00 45.39 4.06
3919 4547 6.014156 TCAGATCAGATGAGATCAGATTGCAT 60.014 38.462 6.70 0.00 45.39 3.96
3920 4548 5.304614 TCAGATCAGATGAGATCAGATTGCA 59.695 40.000 6.70 0.00 45.39 4.08
3921 4549 5.785243 TCAGATCAGATGAGATCAGATTGC 58.215 41.667 6.70 0.00 45.39 3.56
3922 4550 7.039270 GGATCAGATCAGATGAGATCAGATTG 58.961 42.308 12.66 0.74 45.50 2.67
3923 4551 6.726764 TGGATCAGATCAGATGAGATCAGATT 59.273 38.462 12.66 0.00 45.50 2.40
3925 4553 5.642165 TGGATCAGATCAGATGAGATCAGA 58.358 41.667 12.66 4.45 45.39 3.27
3926 4554 5.986501 TGGATCAGATCAGATGAGATCAG 57.013 43.478 12.66 0.00 45.39 2.90
3927 4555 6.497259 TCATTGGATCAGATCAGATGAGATCA 59.503 38.462 17.64 1.51 45.39 2.92
3928 4556 6.814644 GTCATTGGATCAGATCAGATGAGATC 59.185 42.308 20.27 11.06 43.73 2.75
3929 4557 6.572703 CGTCATTGGATCAGATCAGATGAGAT 60.573 42.308 20.27 0.00 34.77 2.75
3930 4558 5.278858 CGTCATTGGATCAGATCAGATGAGA 60.279 44.000 20.27 6.74 34.77 3.27
3931 4559 4.924462 CGTCATTGGATCAGATCAGATGAG 59.076 45.833 20.27 13.84 34.77 2.90
3932 4560 4.262335 CCGTCATTGGATCAGATCAGATGA 60.262 45.833 17.64 17.64 32.98 2.92
3933 4561 3.995048 CCGTCATTGGATCAGATCAGATG 59.005 47.826 12.66 13.88 0.00 2.90
3934 4562 3.645212 ACCGTCATTGGATCAGATCAGAT 59.355 43.478 12.66 0.00 0.00 2.90
3935 4563 3.033909 ACCGTCATTGGATCAGATCAGA 58.966 45.455 12.66 0.00 0.00 3.27
3936 4564 3.069300 AGACCGTCATTGGATCAGATCAG 59.931 47.826 12.66 0.00 0.00 2.90
3937 4565 3.033909 AGACCGTCATTGGATCAGATCA 58.966 45.455 12.66 0.00 0.00 2.92
3938 4566 3.742433 AGACCGTCATTGGATCAGATC 57.258 47.619 1.18 1.18 0.00 2.75
3939 4567 4.494091 AAAGACCGTCATTGGATCAGAT 57.506 40.909 0.40 0.00 0.00 2.90
3940 4568 3.981071 AAAGACCGTCATTGGATCAGA 57.019 42.857 0.40 0.00 0.00 3.27
3941 4569 4.093998 CAGAAAAGACCGTCATTGGATCAG 59.906 45.833 0.40 0.00 0.00 2.90
3942 4570 4.002982 CAGAAAAGACCGTCATTGGATCA 58.997 43.478 0.40 0.00 0.00 2.92
3943 4571 3.375299 CCAGAAAAGACCGTCATTGGATC 59.625 47.826 0.40 0.00 0.00 3.36
3944 4572 3.009033 TCCAGAAAAGACCGTCATTGGAT 59.991 43.478 0.40 0.00 0.00 3.41
3945 4573 2.370519 TCCAGAAAAGACCGTCATTGGA 59.629 45.455 0.40 3.79 0.00 3.53
3946 4574 2.778299 TCCAGAAAAGACCGTCATTGG 58.222 47.619 0.40 1.56 0.00 3.16
3947 4575 6.371548 TCTTATTCCAGAAAAGACCGTCATTG 59.628 38.462 0.40 0.00 0.00 2.82
3948 4576 6.472887 TCTTATTCCAGAAAAGACCGTCATT 58.527 36.000 0.40 0.00 0.00 2.57
3949 4577 6.049955 TCTTATTCCAGAAAAGACCGTCAT 57.950 37.500 0.40 0.00 0.00 3.06
3950 4578 5.477607 TCTTATTCCAGAAAAGACCGTCA 57.522 39.130 0.40 0.00 0.00 4.35
3951 4579 6.256757 CAGATCTTATTCCAGAAAAGACCGTC 59.743 42.308 0.00 0.00 32.38 4.79
3952 4580 6.109359 CAGATCTTATTCCAGAAAAGACCGT 58.891 40.000 0.00 0.00 32.38 4.83
3953 4581 6.109359 ACAGATCTTATTCCAGAAAAGACCG 58.891 40.000 0.00 0.00 32.38 4.79
3954 4582 6.540551 GGACAGATCTTATTCCAGAAAAGACC 59.459 42.308 9.15 0.00 32.38 3.85
3955 4583 7.065204 GTGGACAGATCTTATTCCAGAAAAGAC 59.935 40.741 15.07 2.21 38.84 3.01
3956 4584 7.106239 GTGGACAGATCTTATTCCAGAAAAGA 58.894 38.462 15.07 7.17 38.84 2.52
3957 4585 6.036517 CGTGGACAGATCTTATTCCAGAAAAG 59.963 42.308 15.07 4.68 38.84 2.27
3958 4586 5.874810 CGTGGACAGATCTTATTCCAGAAAA 59.125 40.000 15.07 0.00 38.84 2.29
3959 4587 5.046591 ACGTGGACAGATCTTATTCCAGAAA 60.047 40.000 15.07 0.00 38.84 2.52
3960 4588 4.466370 ACGTGGACAGATCTTATTCCAGAA 59.534 41.667 15.07 0.00 38.84 3.02
3961 4589 4.023980 ACGTGGACAGATCTTATTCCAGA 58.976 43.478 15.07 0.00 38.84 3.86
3962 4590 4.115516 CACGTGGACAGATCTTATTCCAG 58.884 47.826 15.07 12.14 38.84 3.86
3963 4591 3.513912 ACACGTGGACAGATCTTATTCCA 59.486 43.478 21.57 11.83 35.71 3.53
3964 4592 4.124851 ACACGTGGACAGATCTTATTCC 57.875 45.455 21.57 0.00 0.00 3.01
3965 4593 4.567159 GGAACACGTGGACAGATCTTATTC 59.433 45.833 21.57 9.31 0.00 1.75
3966 4594 4.020573 TGGAACACGTGGACAGATCTTATT 60.021 41.667 21.57 0.00 0.00 1.40
3967 4595 3.513912 TGGAACACGTGGACAGATCTTAT 59.486 43.478 21.57 0.00 0.00 1.73
3968 4596 2.894765 TGGAACACGTGGACAGATCTTA 59.105 45.455 21.57 0.21 0.00 2.10
3969 4597 1.691976 TGGAACACGTGGACAGATCTT 59.308 47.619 21.57 1.53 0.00 2.40
3970 4598 1.338107 TGGAACACGTGGACAGATCT 58.662 50.000 21.57 0.00 0.00 2.75
3971 4599 3.906660 TGGAACACGTGGACAGATC 57.093 52.632 21.57 7.71 0.00 2.75
3984 4612 5.448360 GCAGCAGAGTATTTTGAGATGGAAC 60.448 44.000 0.00 0.00 0.00 3.62
3985 4613 4.637534 GCAGCAGAGTATTTTGAGATGGAA 59.362 41.667 0.00 0.00 0.00 3.53
3986 4614 4.080695 AGCAGCAGAGTATTTTGAGATGGA 60.081 41.667 0.00 0.00 0.00 3.41
3987 4615 4.197750 AGCAGCAGAGTATTTTGAGATGG 58.802 43.478 0.00 0.00 0.00 3.51
3988 4616 5.448768 CCAAGCAGCAGAGTATTTTGAGATG 60.449 44.000 0.00 0.00 0.00 2.90
3989 4617 4.639310 CCAAGCAGCAGAGTATTTTGAGAT 59.361 41.667 0.00 0.00 0.00 2.75
3990 4618 4.005650 CCAAGCAGCAGAGTATTTTGAGA 58.994 43.478 0.00 0.00 0.00 3.27
3991 4619 3.427233 GCCAAGCAGCAGAGTATTTTGAG 60.427 47.826 0.00 0.00 0.00 3.02
3992 4620 2.489329 GCCAAGCAGCAGAGTATTTTGA 59.511 45.455 0.00 0.00 0.00 2.69
3993 4621 2.490903 AGCCAAGCAGCAGAGTATTTTG 59.509 45.455 0.00 0.00 34.23 2.44
3994 4622 2.800250 AGCCAAGCAGCAGAGTATTTT 58.200 42.857 0.00 0.00 34.23 1.82
3995 4623 2.503895 AGCCAAGCAGCAGAGTATTT 57.496 45.000 0.00 0.00 34.23 1.40
3996 4624 3.634397 TTAGCCAAGCAGCAGAGTATT 57.366 42.857 0.00 0.00 34.23 1.89
3997 4625 3.634397 TTTAGCCAAGCAGCAGAGTAT 57.366 42.857 0.00 0.00 34.23 2.12
3998 4626 3.535561 GATTTAGCCAAGCAGCAGAGTA 58.464 45.455 0.00 0.00 34.23 2.59
3999 4627 2.363683 GATTTAGCCAAGCAGCAGAGT 58.636 47.619 0.00 0.00 34.23 3.24
4000 4628 1.329906 CGATTTAGCCAAGCAGCAGAG 59.670 52.381 0.00 0.00 34.23 3.35
4001 4629 1.372582 CGATTTAGCCAAGCAGCAGA 58.627 50.000 0.00 0.00 34.23 4.26
4002 4630 0.248377 GCGATTTAGCCAAGCAGCAG 60.248 55.000 0.00 0.00 34.23 4.24
4003 4631 1.802636 GCGATTTAGCCAAGCAGCA 59.197 52.632 0.00 0.00 34.23 4.41
4004 4632 4.698056 GCGATTTAGCCAAGCAGC 57.302 55.556 0.00 0.00 0.00 5.25
4012 4640 5.215160 CAACCATGAATTAGGCGATTTAGC 58.785 41.667 0.00 0.00 0.00 3.09
4013 4641 5.278463 CCCAACCATGAATTAGGCGATTTAG 60.278 44.000 0.00 0.00 0.00 1.85
4014 4642 4.582656 CCCAACCATGAATTAGGCGATTTA 59.417 41.667 0.00 0.00 0.00 1.40
4015 4643 3.384467 CCCAACCATGAATTAGGCGATTT 59.616 43.478 0.00 0.00 0.00 2.17
4016 4644 2.958355 CCCAACCATGAATTAGGCGATT 59.042 45.455 0.00 0.00 0.00 3.34
4017 4645 2.586425 CCCAACCATGAATTAGGCGAT 58.414 47.619 0.00 0.00 0.00 4.58
4018 4646 1.409521 CCCCAACCATGAATTAGGCGA 60.410 52.381 0.00 0.00 0.00 5.54
4019 4647 1.032014 CCCCAACCATGAATTAGGCG 58.968 55.000 0.00 0.00 0.00 5.52
4020 4648 2.310538 CTCCCCAACCATGAATTAGGC 58.689 52.381 0.00 0.00 0.00 3.93
4021 4649 2.424812 CCCTCCCCAACCATGAATTAGG 60.425 54.545 0.00 0.00 0.00 2.69
4022 4650 2.244769 ACCCTCCCCAACCATGAATTAG 59.755 50.000 0.00 0.00 0.00 1.73
4023 4651 2.293246 ACCCTCCCCAACCATGAATTA 58.707 47.619 0.00 0.00 0.00 1.40
4024 4652 1.092549 ACCCTCCCCAACCATGAATT 58.907 50.000 0.00 0.00 0.00 2.17
4025 4653 1.092549 AACCCTCCCCAACCATGAAT 58.907 50.000 0.00 0.00 0.00 2.57
4026 4654 0.114168 CAACCCTCCCCAACCATGAA 59.886 55.000 0.00 0.00 0.00 2.57
4027 4655 1.773635 CAACCCTCCCCAACCATGA 59.226 57.895 0.00 0.00 0.00 3.07
4028 4656 1.305213 CCAACCCTCCCCAACCATG 60.305 63.158 0.00 0.00 0.00 3.66
4029 4657 1.782608 ACCAACCCTCCCCAACCAT 60.783 57.895 0.00 0.00 0.00 3.55
4030 4658 2.370403 ACCAACCCTCCCCAACCA 60.370 61.111 0.00 0.00 0.00 3.67
4031 4659 2.117423 CACCAACCCTCCCCAACC 59.883 66.667 0.00 0.00 0.00 3.77
4032 4660 1.228459 GACACCAACCCTCCCCAAC 60.228 63.158 0.00 0.00 0.00 3.77
4033 4661 1.071314 ATGACACCAACCCTCCCCAA 61.071 55.000 0.00 0.00 0.00 4.12
4034 4662 1.465188 ATGACACCAACCCTCCCCA 60.465 57.895 0.00 0.00 0.00 4.96
4035 4663 1.000896 CATGACACCAACCCTCCCC 60.001 63.158 0.00 0.00 0.00 4.81
4036 4664 1.000896 CCATGACACCAACCCTCCC 60.001 63.158 0.00 0.00 0.00 4.30
4037 4665 1.678970 GCCATGACACCAACCCTCC 60.679 63.158 0.00 0.00 0.00 4.30
4038 4666 1.074775 TGCCATGACACCAACCCTC 59.925 57.895 0.00 0.00 0.00 4.30
4039 4667 1.228552 GTGCCATGACACCAACCCT 60.229 57.895 0.00 0.00 34.35 4.34
4040 4668 3.365535 GTGCCATGACACCAACCC 58.634 61.111 0.00 0.00 34.35 4.11
4046 4674 2.625823 CCAACGGGTGCCATGACAC 61.626 63.158 3.15 3.15 39.94 3.67
4047 4675 2.282110 CCAACGGGTGCCATGACA 60.282 61.111 0.00 0.00 0.00 3.58
4048 4676 3.061848 CCCAACGGGTGCCATGAC 61.062 66.667 0.00 0.00 38.25 3.06
4051 4679 4.740822 GAGCCCAACGGGTGCCAT 62.741 66.667 0.06 0.00 46.51 4.40
4054 4682 3.682292 CTAGGAGCCCAACGGGTGC 62.682 68.421 0.06 0.00 46.51 5.01
4055 4683 2.584608 CTAGGAGCCCAACGGGTG 59.415 66.667 0.06 0.00 46.51 4.61
4056 4684 3.400054 GCTAGGAGCCCAACGGGT 61.400 66.667 0.06 0.00 46.51 5.28
4058 4686 2.187946 CTGCTAGGAGCCCAACGG 59.812 66.667 0.00 0.00 41.51 4.44
4059 4687 1.327690 TACCTGCTAGGAGCCCAACG 61.328 60.000 5.59 0.00 41.51 4.10
4060 4688 1.070914 GATACCTGCTAGGAGCCCAAC 59.929 57.143 5.59 0.00 41.51 3.77
4061 4689 1.343985 TGATACCTGCTAGGAGCCCAA 60.344 52.381 5.59 0.00 41.51 4.12
4062 4690 0.264657 TGATACCTGCTAGGAGCCCA 59.735 55.000 5.59 0.00 41.51 5.36
4063 4691 1.424638 TTGATACCTGCTAGGAGCCC 58.575 55.000 5.59 0.00 41.51 5.19
4064 4692 2.224402 CCTTTGATACCTGCTAGGAGCC 60.224 54.545 5.59 0.00 41.51 4.70
4065 4693 2.700897 TCCTTTGATACCTGCTAGGAGC 59.299 50.000 5.59 0.00 42.82 4.70
4066 4694 5.559148 ATTCCTTTGATACCTGCTAGGAG 57.441 43.478 3.88 3.88 37.67 3.69
4067 4695 5.975988 AATTCCTTTGATACCTGCTAGGA 57.024 39.130 8.91 0.00 37.67 2.94
4068 4696 6.122277 TGAAATTCCTTTGATACCTGCTAGG 58.878 40.000 0.00 1.16 42.49 3.02
4069 4697 7.814264 ATGAAATTCCTTTGATACCTGCTAG 57.186 36.000 0.00 0.00 0.00 3.42
4070 4698 7.615365 ACAATGAAATTCCTTTGATACCTGCTA 59.385 33.333 11.18 0.00 31.22 3.49
4071 4699 6.438425 ACAATGAAATTCCTTTGATACCTGCT 59.562 34.615 11.18 0.00 31.22 4.24
4072 4700 6.633856 ACAATGAAATTCCTTTGATACCTGC 58.366 36.000 11.18 0.00 31.22 4.85
4073 4701 6.968904 CGACAATGAAATTCCTTTGATACCTG 59.031 38.462 11.18 0.00 31.22 4.00
4074 4702 6.095440 CCGACAATGAAATTCCTTTGATACCT 59.905 38.462 11.18 0.00 31.22 3.08
4075 4703 6.265577 CCGACAATGAAATTCCTTTGATACC 58.734 40.000 11.18 0.64 31.22 2.73
4076 4704 6.094881 TCCCGACAATGAAATTCCTTTGATAC 59.905 38.462 11.18 3.99 31.22 2.24
4077 4705 6.184068 TCCCGACAATGAAATTCCTTTGATA 58.816 36.000 11.18 0.00 31.22 2.15
4078 4706 5.016173 TCCCGACAATGAAATTCCTTTGAT 58.984 37.500 11.18 0.00 31.22 2.57
4079 4707 4.402829 TCCCGACAATGAAATTCCTTTGA 58.597 39.130 11.18 0.00 31.22 2.69
4080 4708 4.380867 CCTCCCGACAATGAAATTCCTTTG 60.381 45.833 4.79 4.79 31.22 2.77
4081 4709 3.763897 CCTCCCGACAATGAAATTCCTTT 59.236 43.478 0.00 0.00 31.22 3.11
4082 4710 3.010138 TCCTCCCGACAATGAAATTCCTT 59.990 43.478 0.00 0.00 31.22 3.36
4083 4711 2.576191 TCCTCCCGACAATGAAATTCCT 59.424 45.455 0.00 0.00 31.22 3.36
4084 4712 2.683362 GTCCTCCCGACAATGAAATTCC 59.317 50.000 0.00 0.00 41.54 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.