Multiple sequence alignment - TraesCS2D01G588200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G588200 chr2D 100.000 8217 0 0 1 8217 645704913 645713129 0.000000e+00 15175.0
1 TraesCS2D01G588200 chr2D 90.109 829 61 12 5145 5955 645798024 645797199 0.000000e+00 1057.0
2 TraesCS2D01G588200 chr2D 86.905 840 88 10 6059 6895 645797136 645796316 0.000000e+00 922.0
3 TraesCS2D01G588200 chr2D 83.312 791 79 34 2010 2762 645806124 645805349 0.000000e+00 680.0
4 TraesCS2D01G588200 chr2D 86.838 585 51 9 3361 3930 645804764 645804191 1.510000e-176 630.0
5 TraesCS2D01G588200 chr2D 83.931 641 50 25 3961 4587 645804192 645803591 1.550000e-156 564.0
6 TraesCS2D01G588200 chr2D 94.828 174 9 0 7977 8150 645739117 645739290 1.050000e-68 272.0
7 TraesCS2D01G588200 chr2D 90.104 192 16 3 7059 7248 645795974 645795784 6.370000e-61 246.0
8 TraesCS2D01G588200 chr2D 83.103 290 30 6 929 1218 645806822 645806552 6.370000e-61 246.0
9 TraesCS2D01G588200 chr2D 85.039 254 20 12 1342 1594 645806554 645806318 8.240000e-60 243.0
10 TraesCS2D01G588200 chr2D 80.119 337 43 13 2911 3244 645805205 645804890 6.410000e-56 230.0
11 TraesCS2D01G588200 chr2D 85.366 164 14 4 4658 4811 645803598 645803435 2.370000e-35 161.0
12 TraesCS2D01G588200 chr2D 79.444 180 22 10 1977 2150 566786032 566785862 6.740000e-21 113.0
13 TraesCS2D01G588200 chr2D 93.243 74 4 1 7586 7658 645710746 645710819 3.140000e-19 108.0
14 TraesCS2D01G588200 chr2D 93.333 75 2 3 5835 5907 645712497 645712570 3.140000e-19 108.0
15 TraesCS2D01G588200 chr2D 97.872 47 0 1 6010 6056 154827145 154827190 6.840000e-11 80.5
16 TraesCS2D01G588200 chr2A 91.762 4297 190 66 538 4760 771243211 771239005 0.000000e+00 5823.0
17 TraesCS2D01G588200 chr2A 96.121 2965 95 13 5196 8150 771238999 771236045 0.000000e+00 4820.0
18 TraesCS2D01G588200 chr2A 91.781 2482 127 34 3549 6015 771457141 771459560 0.000000e+00 3382.0
19 TraesCS2D01G588200 chr2A 92.888 2109 108 15 6059 8149 771459546 771461630 0.000000e+00 3025.0
20 TraesCS2D01G588200 chr2A 91.209 1274 68 21 3328 4587 771189958 771188715 0.000000e+00 1692.0
21 TraesCS2D01G588200 chr2A 87.644 1392 92 35 2169 3510 771455775 771457136 0.000000e+00 1544.0
22 TraesCS2D01G588200 chr2A 84.615 1196 138 29 6059 7248 771186881 771185726 0.000000e+00 1147.0
23 TraesCS2D01G588200 chr2A 88.103 933 83 11 6059 6977 771494250 771495168 0.000000e+00 1083.0
24 TraesCS2D01G588200 chr2A 89.206 806 72 8 5145 5935 771493429 771494234 0.000000e+00 992.0
25 TraesCS2D01G588200 chr2A 87.745 816 62 15 5162 5955 771187742 771186943 0.000000e+00 918.0
26 TraesCS2D01G588200 chr2A 86.731 618 49 15 3849 4454 771491926 771492522 0.000000e+00 656.0
27 TraesCS2D01G588200 chr2A 79.541 1002 100 45 1807 2753 771488350 771489301 1.170000e-172 617.0
28 TraesCS2D01G588200 chr2A 81.317 835 89 37 1974 2753 771486755 771487577 4.210000e-172 616.0
29 TraesCS2D01G588200 chr2A 84.779 611 52 26 1104 1702 771454337 771454918 7.150000e-160 575.0
30 TraesCS2D01G588200 chr2A 84.386 570 58 19 3285 3850 771490576 771491118 1.570000e-146 531.0
31 TraesCS2D01G588200 chr2A 83.247 388 44 13 1342 1714 771191802 771191421 3.670000e-88 337.0
32 TraesCS2D01G588200 chr2A 89.344 244 22 3 4626 4867 771493176 771493417 3.730000e-78 303.0
33 TraesCS2D01G588200 chr2A 92.381 210 14 2 4661 4868 771188272 771188063 1.730000e-76 298.0
34 TraesCS2D01G588200 chr2A 85.088 228 31 2 2568 2793 771190784 771190558 6.410000e-56 230.0
35 TraesCS2D01G588200 chr2A 82.270 282 29 8 938 1218 771192061 771191800 2.980000e-54 224.0
36 TraesCS2D01G588200 chr2A 92.800 125 9 0 1339 1463 771486414 771486538 1.820000e-41 182.0
37 TraesCS2D01G588200 chr2A 79.918 244 44 4 7908 8150 771459376 771459615 3.050000e-39 174.0
38 TraesCS2D01G588200 chr2A 86.842 152 2 8 214 347 771243465 771243314 3.970000e-33 154.0
39 TraesCS2D01G588200 chr2A 95.588 68 2 1 7592 7658 771238355 771238288 3.140000e-19 108.0
40 TraesCS2D01G588200 chr2A 92.208 77 3 3 5833 5907 771461066 771461141 1.130000e-18 106.0
41 TraesCS2D01G588200 chr2A 96.774 62 2 0 7597 7658 771187052 771186991 4.060000e-18 104.0
42 TraesCS2D01G588200 chr2A 93.939 66 3 1 7594 7658 771494141 771494206 1.890000e-16 99.0
43 TraesCS2D01G588200 chr2B 89.271 3197 154 63 452 3525 789875524 789872394 0.000000e+00 3829.0
44 TraesCS2D01G588200 chr2B 93.957 2118 97 18 6059 8150 789870098 789867986 0.000000e+00 3173.0
45 TraesCS2D01G588200 chr2B 94.851 1515 52 14 3630 5141 789872368 789870877 0.000000e+00 2342.0
46 TraesCS2D01G588200 chr2B 87.156 1308 122 18 3300 4582 789797112 789795826 0.000000e+00 1443.0
47 TraesCS2D01G588200 chr2B 94.375 800 38 6 5219 6015 789870879 789870084 0.000000e+00 1221.0
48 TraesCS2D01G588200 chr2B 85.847 862 98 12 6059 6917 789794617 789793777 0.000000e+00 894.0
49 TraesCS2D01G588200 chr2B 88.321 685 50 8 5288 5955 789795350 789794679 0.000000e+00 795.0
50 TraesCS2D01G588200 chr2B 90.038 261 18 7 6993 7248 789793727 789793470 1.710000e-86 331.0
51 TraesCS2D01G588200 chr2B 84.983 293 28 10 929 1218 789799673 789799394 4.850000e-72 283.0
52 TraesCS2D01G588200 chr2B 91.096 146 12 1 1342 1486 789799396 789799251 6.510000e-46 196.0
53 TraesCS2D01G588200 chr2B 80.569 211 26 5 7940 8150 789870224 789870029 1.850000e-31 148.0
54 TraesCS2D01G588200 chr2B 96.923 65 2 0 7594 7658 789794791 789794727 8.720000e-20 110.0
55 TraesCS2D01G588200 chr2B 94.030 67 2 2 8153 8217 181348054 181347988 5.250000e-17 100.0
56 TraesCS2D01G588200 chr2B 94.118 68 1 2 8152 8217 458929475 458929409 5.250000e-17 100.0
57 TraesCS2D01G588200 chr2B 94.030 67 2 1 8153 8217 514018817 514018751 5.250000e-17 100.0
58 TraesCS2D01G588200 chr2B 76.804 194 28 11 2009 2191 73146151 73145964 8.780000e-15 93.5
59 TraesCS2D01G588200 chr2B 100.000 32 0 0 3539 3570 789872394 789872363 8.910000e-05 60.2
60 TraesCS2D01G588200 chr6B 89.850 266 24 3 4762 5026 630604738 630605001 1.020000e-88 339.0
61 TraesCS2D01G588200 chr6B 92.857 70 1 3 8152 8217 574455387 574455318 1.890000e-16 99.0
62 TraesCS2D01G588200 chr3D 80.435 230 23 12 1974 2191 112212224 112212005 1.100000e-33 156.0
63 TraesCS2D01G588200 chr3D 94.000 50 1 2 6010 6059 395055068 395055021 3.180000e-09 75.0
64 TraesCS2D01G588200 chr3A 79.130 230 25 13 1974 2190 92078617 92078398 4.000000e-28 137.0
65 TraesCS2D01G588200 chr1A 78.351 194 26 9 2009 2191 547134167 547133979 2.420000e-20 111.0
66 TraesCS2D01G588200 chr1A 94.030 67 2 1 8153 8217 138591908 138591974 5.250000e-17 100.0
67 TraesCS2D01G588200 chr6A 77.720 193 29 7 2009 2191 575001196 575001008 1.130000e-18 106.0
68 TraesCS2D01G588200 chr5D 77.835 194 27 9 2009 2191 392946346 392946534 1.130000e-18 106.0
69 TraesCS2D01G588200 chr5B 95.455 66 1 1 8154 8217 52999750 52999685 4.060000e-18 104.0
70 TraesCS2D01G588200 chr5B 95.455 66 2 1 8153 8217 245637192 245637127 4.060000e-18 104.0
71 TraesCS2D01G588200 chrUn 77.320 194 28 9 2009 2191 49199106 49198918 5.250000e-17 100.0
72 TraesCS2D01G588200 chr3B 94.030 67 2 2 8153 8217 149145478 149145412 5.250000e-17 100.0
73 TraesCS2D01G588200 chr3B 94.030 67 2 2 8153 8217 204686966 204686900 5.250000e-17 100.0
74 TraesCS2D01G588200 chr4B 77.901 181 24 8 2022 2191 544006625 544006450 1.890000e-16 99.0
75 TraesCS2D01G588200 chr4B 97.872 47 0 1 6010 6056 522525090 522525135 6.840000e-11 80.5
76 TraesCS2D01G588200 chr4B 97.872 47 0 1 6010 6056 546090256 546090211 6.840000e-11 80.5
77 TraesCS2D01G588200 chr6D 97.872 47 1 0 6010 6056 357785093 357785047 1.900000e-11 82.4
78 TraesCS2D01G588200 chr6D 97.917 48 0 1 6009 6056 471133578 471133624 1.900000e-11 82.4
79 TraesCS2D01G588200 chr6D 95.833 48 1 1 6009 6056 7017574 7017528 8.840000e-10 76.8
80 TraesCS2D01G588200 chr7B 88.889 63 7 0 5994 6056 113308715 113308653 2.460000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G588200 chr2D 645704913 645713129 8216 False 5130.333333 15175 95.525333 1 8217 3 chr2D.!!$F3 8216
1 TraesCS2D01G588200 chr2D 645795784 645798024 2240 True 741.666667 1057 89.039333 5145 7248 3 chr2D.!!$R2 2103
2 TraesCS2D01G588200 chr2D 645803435 645806822 3387 True 393.428571 680 83.958286 929 4811 7 chr2D.!!$R3 3882
3 TraesCS2D01G588200 chr2A 771236045 771243465 7420 True 2726.250000 5823 92.578250 214 8150 4 chr2A.!!$R2 7936
4 TraesCS2D01G588200 chr2A 771454337 771461630 7293 False 1467.666667 3382 88.203000 1104 8150 6 chr2A.!!$F1 7046
5 TraesCS2D01G588200 chr2A 771185726 771192061 6335 True 618.750000 1692 87.916125 938 7658 8 chr2A.!!$R1 6720
6 TraesCS2D01G588200 chr2A 771486414 771495168 8754 False 564.333333 1083 87.263000 1339 7658 9 chr2A.!!$F2 6319
7 TraesCS2D01G588200 chr2B 789867986 789875524 7538 True 1795.533333 3829 92.170500 452 8150 6 chr2B.!!$R6 7698
8 TraesCS2D01G588200 chr2B 789793470 789799673 6203 True 578.857143 1443 89.194857 929 7658 7 chr2B.!!$R5 6729

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
549 577 0.031449 GATAGCCCAGTCTCGTCTGC 59.969 60.000 0.00 0.00 34.47 4.26 F
678 732 0.034089 CCTTTTCCGCCATTCCTCCT 60.034 55.000 0.00 0.00 0.00 3.69 F
1709 1885 0.034186 CTCCAATGCCCTGCCTTACA 60.034 55.000 0.00 0.00 0.00 2.41 F
2079 5474 0.604578 CCCCAAAAGATGCAGTGGTG 59.395 55.000 0.00 0.00 0.00 4.17 F
2263 5776 1.202076 GCCTATCTTCGTGCAGTTTGC 60.202 52.381 0.00 0.00 45.29 3.68 F
2752 6310 2.251818 ACAGAGGTAAAGCTCAGAGCA 58.748 47.619 24.64 0.42 45.56 4.26 F
3900 9367 1.186200 CTACTCTGCTAGTGTGGGCA 58.814 55.000 2.92 0.00 39.39 5.36 F
4744 11198 0.179936 GTCTCTGCCCATCCTTCAGG 59.820 60.000 0.00 0.00 0.00 3.86 F
5641 12484 0.809636 TGGCGATGGTCAAGTATGCG 60.810 55.000 0.00 0.00 0.00 4.73 F
6419 13320 1.134788 CCGTATGAGAACCTGACACCC 60.135 57.143 0.00 0.00 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1466 1598 0.557238 TGAATGGATGGATGGGTGGG 59.443 55.000 0.00 0.0 0.00 4.61 R
2060 5455 0.604578 CACCACTGCATCTTTTGGGG 59.395 55.000 0.00 0.0 33.00 4.96 R
3106 7700 1.298953 ACTAAGATGGTGCCCATGGT 58.701 50.000 11.73 0.0 45.26 3.55 R
3162 7756 2.928116 ACAGCGCTCGGTTTTATAACTC 59.072 45.455 7.13 0.0 34.59 3.01 R
3405 8044 3.550437 AACCATCTGTCTCCTGCATAC 57.450 47.619 0.00 0.0 0.00 2.39 R
4511 10550 1.222936 CCCTGCCTTTCGAGCTCAT 59.777 57.895 15.40 0.0 0.00 2.90 R
5141 11599 0.397564 TCCAGCAGCACATCTTCACA 59.602 50.000 0.00 0.0 0.00 3.58 R
6541 13452 0.314935 ACAAACAAGGAGCAATGCCG 59.685 50.000 0.00 0.0 0.00 5.69 R
6542 13453 1.340889 TGACAAACAAGGAGCAATGCC 59.659 47.619 0.00 0.0 0.00 4.40 R
8180 15318 0.328548 CCCCCTCCCCTAGTCCAATT 60.329 60.000 0.00 0.0 0.00 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.203806 GGGTCAGGTGAGCTAGTCC 58.796 63.158 8.95 0.00 41.88 3.85
19 20 1.668101 GGGTCAGGTGAGCTAGTCCG 61.668 65.000 8.95 0.00 41.88 4.79
20 21 0.680280 GGTCAGGTGAGCTAGTCCGA 60.680 60.000 1.86 0.00 39.31 4.55
21 22 0.452585 GTCAGGTGAGCTAGTCCGAC 59.547 60.000 0.00 0.00 0.00 4.79
22 23 1.025113 TCAGGTGAGCTAGTCCGACG 61.025 60.000 0.00 0.00 0.00 5.12
23 24 1.002379 AGGTGAGCTAGTCCGACGT 60.002 57.895 0.00 0.00 0.00 4.34
24 25 1.136984 GGTGAGCTAGTCCGACGTG 59.863 63.158 0.00 0.00 0.00 4.49
25 26 1.136984 GTGAGCTAGTCCGACGTGG 59.863 63.158 0.00 0.00 40.09 4.94
26 27 2.102553 GAGCTAGTCCGACGTGGC 59.897 66.667 0.00 0.00 37.80 5.01
27 28 3.736482 GAGCTAGTCCGACGTGGCG 62.736 68.421 0.00 0.00 37.80 5.69
49 50 3.072468 CGTCCAGGCCTTCCCGTA 61.072 66.667 0.00 0.00 39.21 4.02
50 51 2.582978 GTCCAGGCCTTCCCGTAC 59.417 66.667 0.00 0.00 39.21 3.67
51 52 2.686106 TCCAGGCCTTCCCGTACC 60.686 66.667 0.00 0.00 39.21 3.34
52 53 3.793888 CCAGGCCTTCCCGTACCC 61.794 72.222 0.00 0.00 39.21 3.69
53 54 4.157120 CAGGCCTTCCCGTACCCG 62.157 72.222 0.00 0.00 39.21 5.28
54 55 4.709604 AGGCCTTCCCGTACCCGT 62.710 66.667 0.00 0.00 39.21 5.28
55 56 4.152964 GGCCTTCCCGTACCCGTC 62.153 72.222 0.00 0.00 0.00 4.79
56 57 3.073101 GCCTTCCCGTACCCGTCT 61.073 66.667 0.00 0.00 0.00 4.18
57 58 2.653087 GCCTTCCCGTACCCGTCTT 61.653 63.158 0.00 0.00 0.00 3.01
58 59 1.322538 GCCTTCCCGTACCCGTCTTA 61.323 60.000 0.00 0.00 0.00 2.10
59 60 0.743097 CCTTCCCGTACCCGTCTTAG 59.257 60.000 0.00 0.00 0.00 2.18
60 61 1.683011 CCTTCCCGTACCCGTCTTAGA 60.683 57.143 0.00 0.00 0.00 2.10
61 62 2.305009 CTTCCCGTACCCGTCTTAGAT 58.695 52.381 0.00 0.00 0.00 1.98
62 63 2.442236 TCCCGTACCCGTCTTAGATT 57.558 50.000 0.00 0.00 0.00 2.40
63 64 2.738743 TCCCGTACCCGTCTTAGATTT 58.261 47.619 0.00 0.00 0.00 2.17
64 65 3.897239 TCCCGTACCCGTCTTAGATTTA 58.103 45.455 0.00 0.00 0.00 1.40
65 66 4.277476 TCCCGTACCCGTCTTAGATTTAA 58.723 43.478 0.00 0.00 0.00 1.52
66 67 4.339247 TCCCGTACCCGTCTTAGATTTAAG 59.661 45.833 0.00 0.00 38.09 1.85
67 68 4.047142 CCGTACCCGTCTTAGATTTAAGC 58.953 47.826 0.00 0.00 36.92 3.09
68 69 4.202090 CCGTACCCGTCTTAGATTTAAGCT 60.202 45.833 0.00 0.00 36.92 3.74
69 70 4.738740 CGTACCCGTCTTAGATTTAAGCTG 59.261 45.833 0.00 0.00 36.92 4.24
70 71 5.449588 CGTACCCGTCTTAGATTTAAGCTGA 60.450 44.000 0.00 0.00 36.92 4.26
71 72 5.416271 ACCCGTCTTAGATTTAAGCTGAA 57.584 39.130 0.00 0.00 36.92 3.02
72 73 5.990668 ACCCGTCTTAGATTTAAGCTGAAT 58.009 37.500 0.00 0.00 36.92 2.57
73 74 6.415573 ACCCGTCTTAGATTTAAGCTGAATT 58.584 36.000 0.00 0.00 36.92 2.17
74 75 6.884836 ACCCGTCTTAGATTTAAGCTGAATTT 59.115 34.615 0.00 0.00 36.92 1.82
75 76 8.044908 ACCCGTCTTAGATTTAAGCTGAATTTA 58.955 33.333 0.00 0.00 36.92 1.40
76 77 8.889717 CCCGTCTTAGATTTAAGCTGAATTTAA 58.110 33.333 0.00 0.00 36.92 1.52
77 78 9.922305 CCGTCTTAGATTTAAGCTGAATTTAAG 57.078 33.333 18.14 18.14 36.92 1.85
78 79 9.922305 CGTCTTAGATTTAAGCTGAATTTAAGG 57.078 33.333 21.04 10.90 36.92 2.69
80 81 9.408648 TCTTAGATTTAAGCTGAATTTAAGGGG 57.591 33.333 21.04 8.07 36.92 4.79
81 82 9.190317 CTTAGATTTAAGCTGAATTTAAGGGGT 57.810 33.333 17.25 0.00 32.11 4.95
82 83 7.410120 AGATTTAAGCTGAATTTAAGGGGTG 57.590 36.000 0.00 0.00 0.00 4.61
83 84 5.400066 TTTAAGCTGAATTTAAGGGGTGC 57.600 39.130 0.00 0.00 0.00 5.01
84 85 1.852633 AGCTGAATTTAAGGGGTGCC 58.147 50.000 0.00 0.00 0.00 5.01
85 86 0.455815 GCTGAATTTAAGGGGTGCCG 59.544 55.000 0.00 0.00 0.00 5.69
86 87 1.102978 CTGAATTTAAGGGGTGCCGG 58.897 55.000 0.00 0.00 0.00 6.13
87 88 0.406361 TGAATTTAAGGGGTGCCGGT 59.594 50.000 1.90 0.00 0.00 5.28
88 89 1.100510 GAATTTAAGGGGTGCCGGTC 58.899 55.000 1.90 0.00 0.00 4.79
89 90 0.406361 AATTTAAGGGGTGCCGGTCA 59.594 50.000 1.90 0.00 0.00 4.02
90 91 0.406361 ATTTAAGGGGTGCCGGTCAA 59.594 50.000 1.90 0.00 0.00 3.18
91 92 0.537828 TTTAAGGGGTGCCGGTCAAC 60.538 55.000 1.90 4.06 0.00 3.18
92 93 1.706995 TTAAGGGGTGCCGGTCAACA 61.707 55.000 14.52 0.00 32.80 3.33
93 94 1.493854 TAAGGGGTGCCGGTCAACAT 61.494 55.000 14.52 4.43 32.80 2.71
94 95 3.061848 GGGGTGCCGGTCAACATG 61.062 66.667 14.52 0.00 32.80 3.21
95 96 3.061848 GGGTGCCGGTCAACATGG 61.062 66.667 14.52 0.00 32.80 3.66
96 97 2.033448 GGTGCCGGTCAACATGGA 59.967 61.111 1.90 0.00 31.06 3.41
97 98 2.332654 GGTGCCGGTCAACATGGAC 61.333 63.158 1.90 0.00 37.06 4.02
98 99 2.358125 TGCCGGTCAACATGGACG 60.358 61.111 1.90 0.00 38.70 4.79
99 100 2.358247 GCCGGTCAACATGGACGT 60.358 61.111 1.90 0.00 38.70 4.34
100 101 2.388232 GCCGGTCAACATGGACGTC 61.388 63.158 7.13 7.13 38.70 4.34
101 102 1.740296 CCGGTCAACATGGACGTCC 60.740 63.158 28.17 28.17 38.70 4.79
102 103 2.092291 CGGTCAACATGGACGTCCG 61.092 63.158 28.70 18.15 38.70 4.79
103 104 2.388232 GGTCAACATGGACGTCCGC 61.388 63.158 28.70 7.51 38.70 5.54
104 105 1.374252 GTCAACATGGACGTCCGCT 60.374 57.895 28.70 16.42 39.43 5.52
105 106 1.080093 TCAACATGGACGTCCGCTC 60.080 57.895 28.70 6.34 39.43 5.03
106 107 1.374125 CAACATGGACGTCCGCTCA 60.374 57.895 28.70 12.57 39.43 4.26
107 108 1.079819 AACATGGACGTCCGCTCAG 60.080 57.895 28.70 17.86 39.43 3.35
108 109 1.816863 AACATGGACGTCCGCTCAGT 61.817 55.000 28.70 18.47 39.43 3.41
109 110 1.079819 CATGGACGTCCGCTCAGTT 60.080 57.895 28.70 5.34 39.43 3.16
110 111 0.670546 CATGGACGTCCGCTCAGTTT 60.671 55.000 28.70 3.95 39.43 2.66
111 112 0.892755 ATGGACGTCCGCTCAGTTTA 59.107 50.000 28.70 9.04 39.43 2.01
112 113 0.242825 TGGACGTCCGCTCAGTTTAG 59.757 55.000 28.70 0.00 39.43 1.85
113 114 0.458025 GGACGTCCGCTCAGTTTAGG 60.458 60.000 20.85 0.00 0.00 2.69
114 115 0.524862 GACGTCCGCTCAGTTTAGGA 59.475 55.000 3.51 0.00 0.00 2.94
116 117 3.031660 GTCCGCTCAGTTTAGGACG 57.968 57.895 0.00 0.00 42.88 4.79
117 118 0.524862 GTCCGCTCAGTTTAGGACGA 59.475 55.000 0.00 0.00 42.88 4.20
118 119 0.524862 TCCGCTCAGTTTAGGACGAC 59.475 55.000 0.00 0.00 0.00 4.34
119 120 0.458025 CCGCTCAGTTTAGGACGACC 60.458 60.000 0.00 0.00 0.00 4.79
120 121 0.797249 CGCTCAGTTTAGGACGACCG 60.797 60.000 0.00 0.00 41.83 4.79
121 122 0.458025 GCTCAGTTTAGGACGACCGG 60.458 60.000 0.00 0.00 41.83 5.28
122 123 0.458025 CTCAGTTTAGGACGACCGGC 60.458 60.000 0.00 0.00 41.83 6.13
123 124 0.896940 TCAGTTTAGGACGACCGGCT 60.897 55.000 0.00 0.00 41.83 5.52
124 125 0.736325 CAGTTTAGGACGACCGGCTG 60.736 60.000 0.00 0.00 41.83 4.85
125 126 1.447314 GTTTAGGACGACCGGCTGG 60.447 63.158 11.02 11.02 41.83 4.85
135 136 4.745751 CCGGCTGGTTCGCGGTTA 62.746 66.667 6.13 0.00 0.00 2.85
136 137 3.484547 CGGCTGGTTCGCGGTTAC 61.485 66.667 6.13 1.97 0.00 2.50
137 138 3.484547 GGCTGGTTCGCGGTTACG 61.485 66.667 6.13 0.00 44.63 3.18
138 139 2.735857 GCTGGTTCGCGGTTACGT 60.736 61.111 6.13 0.00 43.45 3.57
148 149 2.739671 GGTTACGTGACCGGGCAC 60.740 66.667 31.59 31.59 38.78 5.01
149 150 2.341176 GTTACGTGACCGGGCACT 59.659 61.111 36.53 25.17 38.78 4.40
150 151 2.025418 GTTACGTGACCGGGCACTG 61.025 63.158 36.53 29.92 38.78 3.66
151 152 2.201708 TTACGTGACCGGGCACTGA 61.202 57.895 36.53 22.15 38.78 3.41
152 153 1.537814 TTACGTGACCGGGCACTGAT 61.538 55.000 36.53 23.97 38.78 2.90
153 154 1.537814 TACGTGACCGGGCACTGATT 61.538 55.000 36.53 20.45 38.78 2.57
154 155 2.390599 CGTGACCGGGCACTGATTG 61.391 63.158 36.53 18.24 36.31 2.67
155 156 2.040544 GTGACCGGGCACTGATTGG 61.041 63.158 33.80 0.00 36.31 3.16
156 157 2.438434 GACCGGGCACTGATTGGG 60.438 66.667 0.00 0.00 36.31 4.12
157 158 4.740822 ACCGGGCACTGATTGGGC 62.741 66.667 6.32 0.00 46.31 5.36
162 163 3.134127 GCACTGATTGGGCCGTCC 61.134 66.667 0.00 0.00 39.71 4.79
163 164 2.350895 CACTGATTGGGCCGTCCA 59.649 61.111 0.00 0.00 45.43 4.02
164 165 1.077501 CACTGATTGGGCCGTCCAT 60.078 57.895 0.00 0.00 46.52 3.41
165 166 1.097547 CACTGATTGGGCCGTCCATC 61.098 60.000 0.00 0.00 46.52 3.51
166 167 1.889105 CTGATTGGGCCGTCCATCG 60.889 63.158 0.00 0.00 46.52 3.84
178 179 2.210116 CGTCCATCGGATAAAGTTGGG 58.790 52.381 0.00 0.00 32.73 4.12
179 180 2.572290 GTCCATCGGATAAAGTTGGGG 58.428 52.381 0.00 0.00 32.73 4.96
180 181 2.171870 GTCCATCGGATAAAGTTGGGGA 59.828 50.000 0.00 0.00 32.73 4.81
181 182 2.438021 TCCATCGGATAAAGTTGGGGAG 59.562 50.000 0.00 0.00 0.00 4.30
182 183 2.222027 CATCGGATAAAGTTGGGGAGC 58.778 52.381 0.00 0.00 0.00 4.70
183 184 0.544697 TCGGATAAAGTTGGGGAGCC 59.455 55.000 0.00 0.00 0.00 4.70
184 185 0.814010 CGGATAAAGTTGGGGAGCCG 60.814 60.000 0.00 0.00 0.00 5.52
185 186 0.465642 GGATAAAGTTGGGGAGCCGG 60.466 60.000 0.00 0.00 0.00 6.13
186 187 0.465642 GATAAAGTTGGGGAGCCGGG 60.466 60.000 2.18 0.00 0.00 5.73
187 188 2.567664 ATAAAGTTGGGGAGCCGGGC 62.568 60.000 12.11 12.11 0.00 6.13
195 196 3.400054 GGAGCCGGGCTGTACCTT 61.400 66.667 29.31 0.00 39.88 3.50
196 197 2.669240 GAGCCGGGCTGTACCTTT 59.331 61.111 29.31 0.00 39.88 3.11
197 198 1.002502 GAGCCGGGCTGTACCTTTT 60.003 57.895 29.31 0.00 39.88 2.27
198 199 0.608308 GAGCCGGGCTGTACCTTTTT 60.608 55.000 29.31 0.00 39.88 1.94
229 230 2.422597 TGTGTGAATAGTTGCTTCCCG 58.577 47.619 0.00 0.00 0.00 5.14
286 296 3.876914 CACTTGGCAAGAACACAAGAGTA 59.123 43.478 32.50 0.00 43.13 2.59
294 304 3.759581 AGAACACAAGAGTAGGTACGGA 58.240 45.455 0.00 0.00 0.00 4.69
297 307 2.040813 ACACAAGAGTAGGTACGGAGGA 59.959 50.000 0.00 0.00 0.00 3.71
301 311 1.141455 AGAGTAGGTACGGAGGAGAGC 59.859 57.143 0.00 0.00 0.00 4.09
303 313 0.179062 GTAGGTACGGAGGAGAGCGA 60.179 60.000 0.00 0.00 0.00 4.93
304 314 0.179062 TAGGTACGGAGGAGAGCGAC 60.179 60.000 0.00 0.00 0.00 5.19
305 315 2.708255 GTACGGAGGAGAGCGACG 59.292 66.667 0.00 0.00 0.00 5.12
306 316 2.105466 GTACGGAGGAGAGCGACGT 61.105 63.158 0.00 0.00 41.10 4.34
308 318 4.180946 CGGAGGAGAGCGACGTGG 62.181 72.222 0.00 0.00 0.00 4.94
347 366 1.736645 AACGTGCACGGAATCTCGG 60.737 57.895 39.21 12.35 44.95 4.63
348 367 2.885644 CGTGCACGGAATCTCGGG 60.886 66.667 31.15 0.00 36.50 5.14
352 371 3.833645 CACGGAATCTCGGGCGGA 61.834 66.667 0.00 0.00 0.00 5.54
354 373 2.421739 CGGAATCTCGGGCGGAAT 59.578 61.111 0.00 0.00 0.00 3.01
355 374 1.664965 CGGAATCTCGGGCGGAATC 60.665 63.158 0.00 0.00 0.00 2.52
356 375 1.749033 GGAATCTCGGGCGGAATCT 59.251 57.895 0.00 0.00 0.00 2.40
357 376 0.319986 GGAATCTCGGGCGGAATCTC 60.320 60.000 0.00 0.00 0.00 2.75
358 377 0.319986 GAATCTCGGGCGGAATCTCC 60.320 60.000 0.00 0.00 0.00 3.71
377 396 2.813779 CGTCACCGGTAGTACTACAC 57.186 55.000 29.38 18.99 37.78 2.90
378 397 1.398390 CGTCACCGGTAGTACTACACC 59.602 57.143 29.38 18.05 37.78 4.16
384 403 1.028130 GGTAGTACTACACCGGGAGC 58.972 60.000 29.38 9.96 37.78 4.70
385 404 1.409381 GGTAGTACTACACCGGGAGCT 60.409 57.143 29.38 0.00 37.78 4.09
386 405 2.373224 GTAGTACTACACCGGGAGCTT 58.627 52.381 25.02 0.00 36.15 3.74
387 406 1.183549 AGTACTACACCGGGAGCTTG 58.816 55.000 6.32 0.00 0.00 4.01
388 407 1.180029 GTACTACACCGGGAGCTTGA 58.820 55.000 6.32 0.00 0.00 3.02
389 408 1.134560 GTACTACACCGGGAGCTTGAG 59.865 57.143 6.32 0.00 0.00 3.02
390 409 1.258445 ACTACACCGGGAGCTTGAGG 61.258 60.000 6.32 0.00 0.00 3.86
391 410 2.579684 CTACACCGGGAGCTTGAGGC 62.580 65.000 6.32 0.00 42.19 4.70
392 411 4.785453 CACCGGGAGCTTGAGGCC 62.785 72.222 6.32 0.00 43.05 5.19
395 414 4.082523 CGGGAGCTTGAGGCCGAA 62.083 66.667 0.00 0.00 43.05 4.30
396 415 2.124942 GGGAGCTTGAGGCCGAAG 60.125 66.667 12.06 12.06 43.05 3.79
397 416 2.821810 GGAGCTTGAGGCCGAAGC 60.822 66.667 26.66 26.66 45.22 3.86
429 448 2.158885 GGGAGTAGATGAGGTCAAAGGC 60.159 54.545 0.00 0.00 0.00 4.35
430 449 2.769095 GGAGTAGATGAGGTCAAAGGCT 59.231 50.000 0.00 0.00 0.00 4.58
432 451 4.187694 GAGTAGATGAGGTCAAAGGCTTG 58.812 47.826 0.00 0.00 0.00 4.01
434 453 1.988107 AGATGAGGTCAAAGGCTTGGA 59.012 47.619 0.00 0.00 33.01 3.53
436 455 2.978156 TGAGGTCAAAGGCTTGGAAT 57.022 45.000 5.75 0.00 33.01 3.01
437 456 2.795329 TGAGGTCAAAGGCTTGGAATC 58.205 47.619 5.75 8.37 33.01 2.52
438 457 2.376518 TGAGGTCAAAGGCTTGGAATCT 59.623 45.455 5.75 7.15 33.01 2.40
439 458 3.013219 GAGGTCAAAGGCTTGGAATCTC 58.987 50.000 5.75 12.28 33.01 2.75
440 459 2.095461 GGTCAAAGGCTTGGAATCTCC 58.905 52.381 5.75 0.00 36.96 3.71
441 460 2.095461 GTCAAAGGCTTGGAATCTCCC 58.905 52.381 5.75 0.00 35.03 4.30
442 461 1.710244 TCAAAGGCTTGGAATCTCCCA 59.290 47.619 0.66 0.00 35.03 4.37
443 462 1.821136 CAAAGGCTTGGAATCTCCCAC 59.179 52.381 0.00 0.00 35.03 4.61
444 463 1.376649 AAGGCTTGGAATCTCCCACT 58.623 50.000 0.00 0.00 35.03 4.00
445 464 0.915364 AGGCTTGGAATCTCCCACTC 59.085 55.000 0.00 0.00 35.03 3.51
446 465 0.106967 GGCTTGGAATCTCCCACTCC 60.107 60.000 0.00 0.00 35.03 3.85
447 466 0.620556 GCTTGGAATCTCCCACTCCA 59.379 55.000 0.00 0.00 37.47 3.86
480 499 2.775960 TCTCGAGTACCAGTATCTCCCA 59.224 50.000 13.13 0.00 0.00 4.37
481 500 3.394940 TCTCGAGTACCAGTATCTCCCAT 59.605 47.826 13.13 0.00 0.00 4.00
482 501 3.752665 TCGAGTACCAGTATCTCCCATC 58.247 50.000 0.00 0.00 0.00 3.51
483 502 3.394940 TCGAGTACCAGTATCTCCCATCT 59.605 47.826 0.00 0.00 0.00 2.90
549 577 0.031449 GATAGCCCAGTCTCGTCTGC 59.969 60.000 0.00 0.00 34.47 4.26
571 599 0.997363 TCCTCTACTCCCGGAACAGA 59.003 55.000 0.73 0.00 0.00 3.41
615 643 1.615424 ATAAGGACACGTGGGCCCT 60.615 57.895 25.70 18.99 0.00 5.19
676 730 1.383523 CTCCTTTTCCGCCATTCCTC 58.616 55.000 0.00 0.00 0.00 3.71
677 731 0.034477 TCCTTTTCCGCCATTCCTCC 60.034 55.000 0.00 0.00 0.00 4.30
678 732 0.034089 CCTTTTCCGCCATTCCTCCT 60.034 55.000 0.00 0.00 0.00 3.69
679 733 1.098050 CTTTTCCGCCATTCCTCCTG 58.902 55.000 0.00 0.00 0.00 3.86
909 999 2.121832 TCACCATCCACCCCGTCT 59.878 61.111 0.00 0.00 0.00 4.18
910 1000 1.537889 TCACCATCCACCCCGTCTT 60.538 57.895 0.00 0.00 0.00 3.01
911 1001 1.078426 CACCATCCACCCCGTCTTC 60.078 63.158 0.00 0.00 0.00 2.87
912 1002 2.298661 ACCATCCACCCCGTCTTCC 61.299 63.158 0.00 0.00 0.00 3.46
914 1004 1.995626 CATCCACCCCGTCTTCCCT 60.996 63.158 0.00 0.00 0.00 4.20
915 1005 1.689582 ATCCACCCCGTCTTCCCTC 60.690 63.158 0.00 0.00 0.00 4.30
916 1006 2.471084 ATCCACCCCGTCTTCCCTCA 62.471 60.000 0.00 0.00 0.00 3.86
917 1007 2.663196 CACCCCGTCTTCCCTCAC 59.337 66.667 0.00 0.00 0.00 3.51
919 1009 3.400054 CCCCGTCTTCCCTCACCC 61.400 72.222 0.00 0.00 0.00 4.61
921 1011 3.400054 CCGTCTTCCCTCACCCCC 61.400 72.222 0.00 0.00 0.00 5.40
922 1012 2.284699 CGTCTTCCCTCACCCCCT 60.285 66.667 0.00 0.00 0.00 4.79
923 1013 2.359967 CGTCTTCCCTCACCCCCTC 61.360 68.421 0.00 0.00 0.00 4.30
924 1014 1.081277 GTCTTCCCTCACCCCCTCT 59.919 63.158 0.00 0.00 0.00 3.69
926 1016 1.690985 CTTCCCTCACCCCCTCTCC 60.691 68.421 0.00 0.00 0.00 3.71
927 1017 2.477190 CTTCCCTCACCCCCTCTCCA 62.477 65.000 0.00 0.00 0.00 3.86
928 1018 1.837533 TTCCCTCACCCCCTCTCCAT 61.838 60.000 0.00 0.00 0.00 3.41
929 1019 1.768077 CCCTCACCCCCTCTCCATC 60.768 68.421 0.00 0.00 0.00 3.51
930 1020 1.316266 CCTCACCCCCTCTCCATCT 59.684 63.158 0.00 0.00 0.00 2.90
931 1021 0.762461 CCTCACCCCCTCTCCATCTC 60.762 65.000 0.00 0.00 0.00 2.75
932 1022 0.762461 CTCACCCCCTCTCCATCTCC 60.762 65.000 0.00 0.00 0.00 3.71
933 1023 1.768077 CACCCCCTCTCCATCTCCC 60.768 68.421 0.00 0.00 0.00 4.30
934 1024 1.949449 ACCCCCTCTCCATCTCCCT 60.949 63.158 0.00 0.00 0.00 4.20
935 1025 1.152139 CCCCCTCTCCATCTCCCTC 60.152 68.421 0.00 0.00 0.00 4.30
1177 1277 1.258445 GCTCTCCGACCCCTTCTTCA 61.258 60.000 0.00 0.00 0.00 3.02
1320 1428 0.607620 GAGCTCTCTGCCTGTCTGTT 59.392 55.000 6.43 0.00 44.23 3.16
1330 1446 1.507141 CCTGTCTGTTTGTGTCCGCC 61.507 60.000 0.00 0.00 0.00 6.13
1496 1641 3.148412 CCATCCATTCAACACACTGTCA 58.852 45.455 0.00 0.00 0.00 3.58
1497 1642 3.569277 CCATCCATTCAACACACTGTCAA 59.431 43.478 0.00 0.00 0.00 3.18
1498 1643 4.219070 CCATCCATTCAACACACTGTCAAT 59.781 41.667 0.00 0.00 0.00 2.57
1499 1644 5.396484 CATCCATTCAACACACTGTCAATC 58.604 41.667 0.00 0.00 0.00 2.67
1500 1645 4.459330 TCCATTCAACACACTGTCAATCA 58.541 39.130 0.00 0.00 0.00 2.57
1548 1697 4.647424 GCAGTCTCACTTACTCTGCTAT 57.353 45.455 7.98 0.00 45.14 2.97
1549 1698 5.759506 GCAGTCTCACTTACTCTGCTATA 57.240 43.478 7.98 0.00 45.14 1.31
1551 1700 7.441890 GCAGTCTCACTTACTCTGCTATATA 57.558 40.000 7.98 0.00 45.14 0.86
1552 1701 7.302524 GCAGTCTCACTTACTCTGCTATATAC 58.697 42.308 7.98 0.00 45.14 1.47
1672 1847 5.529289 TCCAATCTGAGGTATAGGTTCACT 58.471 41.667 0.00 0.00 0.00 3.41
1709 1885 0.034186 CTCCAATGCCCTGCCTTACA 60.034 55.000 0.00 0.00 0.00 2.41
1829 3427 4.617253 TCTTGCTTGCTAAGACAAGGTA 57.383 40.909 19.58 9.28 45.83 3.08
1832 3430 3.009723 TGCTTGCTAAGACAAGGTATGC 58.990 45.455 6.42 0.00 45.83 3.14
1877 3486 3.932710 CGGATTGAAAGGATTTGACGAGA 59.067 43.478 0.00 0.00 39.27 4.04
1943 3555 1.982073 CTTCGAGGCCATTTCCGCAC 61.982 60.000 5.01 0.00 0.00 5.34
1956 3568 1.801913 CCGCACGGTCTTTCTCGAG 60.802 63.158 5.93 5.93 0.00 4.04
1958 3570 2.095252 GCACGGTCTTTCTCGAGCC 61.095 63.158 7.81 1.31 37.09 4.70
1984 3596 7.383300 CCCAACTTCTGAAATTCAGTTGAAATC 59.617 37.037 20.91 2.12 44.58 2.17
2060 5455 8.522830 TCTGATTTGTAAAACCTGGATGATTTC 58.477 33.333 0.00 0.00 0.00 2.17
2079 5474 0.604578 CCCCAAAAGATGCAGTGGTG 59.395 55.000 0.00 0.00 0.00 4.17
2093 5488 3.403038 CAGTGGTGACTTTTCTGGTAGG 58.597 50.000 0.00 0.00 0.00 3.18
2106 5501 2.646719 GTAGGTCGTGGTGTCGCA 59.353 61.111 0.00 0.00 0.00 5.10
2230 5737 8.466617 TTGAACCATAAGACTATCTAGGAGAC 57.533 38.462 0.00 0.00 0.00 3.36
2244 5751 3.909086 GAGACTGGTGGTGGGCAGC 62.909 68.421 0.00 0.00 0.00 5.25
2263 5776 1.202076 GCCTATCTTCGTGCAGTTTGC 60.202 52.381 0.00 0.00 45.29 3.68
2275 5792 5.124617 TCGTGCAGTTTGCCATAATAATTCA 59.875 36.000 0.00 0.00 44.23 2.57
2289 5806 9.199982 CCATAATAATTCATCCAAATCACTTGC 57.800 33.333 0.00 0.00 33.27 4.01
2328 5855 7.042051 CCATGCTTTTGTGCGTACTACTTATAT 60.042 37.037 4.97 0.00 35.36 0.86
2576 6126 8.535335 TCTATTTAGACTTCCATATCTGCCATC 58.465 37.037 0.00 0.00 0.00 3.51
2589 6142 8.412456 CCATATCTGCCATCTCATACTACTTAG 58.588 40.741 0.00 0.00 0.00 2.18
2746 6304 3.418684 TGGGAAACAGAGGTAAAGCTC 57.581 47.619 0.87 0.87 0.00 4.09
2748 6306 3.244561 TGGGAAACAGAGGTAAAGCTCAG 60.245 47.826 11.44 6.05 0.00 3.35
2749 6307 3.008049 GGGAAACAGAGGTAAAGCTCAGA 59.992 47.826 11.44 0.00 0.00 3.27
2750 6308 4.249661 GGAAACAGAGGTAAAGCTCAGAG 58.750 47.826 11.44 0.00 0.00 3.35
2751 6309 3.326836 AACAGAGGTAAAGCTCAGAGC 57.673 47.619 15.25 15.25 42.84 4.09
2752 6310 2.251818 ACAGAGGTAAAGCTCAGAGCA 58.748 47.619 24.64 0.42 45.56 4.26
2753 6311 2.836981 ACAGAGGTAAAGCTCAGAGCAT 59.163 45.455 24.64 10.10 45.56 3.79
2754 6312 3.262915 ACAGAGGTAAAGCTCAGAGCATT 59.737 43.478 24.64 20.49 45.56 3.56
2755 6313 3.622163 CAGAGGTAAAGCTCAGAGCATTG 59.378 47.826 24.64 2.86 45.56 2.82
2756 6314 3.262915 AGAGGTAAAGCTCAGAGCATTGT 59.737 43.478 24.64 8.13 45.56 2.71
2757 6315 4.006319 GAGGTAAAGCTCAGAGCATTGTT 58.994 43.478 24.64 14.03 45.56 2.83
2758 6316 5.046304 AGAGGTAAAGCTCAGAGCATTGTTA 60.046 40.000 24.64 13.10 45.56 2.41
2759 6317 5.749462 AGGTAAAGCTCAGAGCATTGTTAT 58.251 37.500 24.64 4.57 45.56 1.89
2760 6318 6.889198 AGGTAAAGCTCAGAGCATTGTTATA 58.111 36.000 24.64 0.37 45.56 0.98
2761 6319 6.763610 AGGTAAAGCTCAGAGCATTGTTATAC 59.236 38.462 24.64 12.49 45.56 1.47
2762 6320 6.538742 GGTAAAGCTCAGAGCATTGTTATACA 59.461 38.462 24.64 0.00 45.56 2.29
2763 6321 6.428385 AAAGCTCAGAGCATTGTTATACAC 57.572 37.500 24.64 0.00 45.56 2.90
2785 6351 8.657387 ACACTTATACTGGAGCACATCTATAT 57.343 34.615 0.00 0.00 0.00 0.86
2870 6803 2.674220 GGGGTCAGAGCCAAGGAGG 61.674 68.421 20.48 0.00 37.54 4.30
3002 6947 5.074584 ACTTCCGATTCTTGTAGGAGAAC 57.925 43.478 0.00 0.00 38.39 3.01
3080 7668 3.603965 ACCAGTTTATGTGTTTCCCCA 57.396 42.857 0.00 0.00 0.00 4.96
3102 7696 9.184523 CCCCAAGTTACTGTCAATGAAATATAA 57.815 33.333 0.00 0.00 0.00 0.98
3189 7783 3.636282 AAAACCGAGCGCTGTATTTTT 57.364 38.095 18.48 12.04 0.00 1.94
3273 7876 6.509656 ACTTTACACACTTGACGACAGATAA 58.490 36.000 0.00 0.00 0.00 1.75
3275 7878 3.650139 ACACACTTGACGACAGATAACC 58.350 45.455 0.00 0.00 0.00 2.85
3277 7880 4.202223 ACACACTTGACGACAGATAACCTT 60.202 41.667 0.00 0.00 0.00 3.50
3279 7882 5.924254 CACACTTGACGACAGATAACCTTAA 59.076 40.000 0.00 0.00 0.00 1.85
3280 7883 6.590292 CACACTTGACGACAGATAACCTTAAT 59.410 38.462 0.00 0.00 0.00 1.40
3281 7884 7.117812 CACACTTGACGACAGATAACCTTAATT 59.882 37.037 0.00 0.00 0.00 1.40
3405 8044 4.332543 TGAGTAAAATATTGCCTGACGCTG 59.667 41.667 0.00 0.00 38.78 5.18
3569 8218 6.861572 GGTGCTGGTAATTCAACTTTTCTAAC 59.138 38.462 0.00 0.00 0.00 2.34
3594 8250 2.163010 GCAGATGCAGTGCTGTAAATGT 59.837 45.455 17.60 0.00 41.59 2.71
3836 8492 9.595357 GAACTACATAACACTTGCTTAGAAAAC 57.405 33.333 0.00 0.00 0.00 2.43
3900 9367 1.186200 CTACTCTGCTAGTGTGGGCA 58.814 55.000 2.92 0.00 39.39 5.36
4013 9485 4.141505 TGTGGAATCTTCAGGACAGTTCAA 60.142 41.667 0.00 0.00 0.00 2.69
4311 9796 5.502544 GCGAAAGTATCTCATTGTAACAGGC 60.503 44.000 0.00 0.00 0.00 4.85
4441 9933 5.783111 ACATTGGTGACTAAAAATTGGAGC 58.217 37.500 0.00 0.00 0.00 4.70
4442 9934 4.864704 TTGGTGACTAAAAATTGGAGCC 57.135 40.909 0.00 0.00 0.00 4.70
4550 10589 4.902448 GGGGATAACTCCTGTCTTCTATGT 59.098 45.833 0.00 0.00 41.74 2.29
4639 10678 9.778741 CACCCATACATAAAGAGTATGTACATT 57.221 33.333 14.77 0.00 44.54 2.71
4744 11198 0.179936 GTCTCTGCCCATCCTTCAGG 59.820 60.000 0.00 0.00 0.00 3.86
5005 11460 4.112634 TGTTTCTATCCCAAAAGCACCT 57.887 40.909 0.00 0.00 0.00 4.00
5007 11462 4.522789 TGTTTCTATCCCAAAAGCACCTTC 59.477 41.667 0.00 0.00 0.00 3.46
5141 11599 6.552445 AAGAGCATCCAGTAGTTTGATACT 57.448 37.500 0.00 0.00 36.93 2.12
5208 11963 7.327032 GCTTACAATTTGTTCACTTTCATCTCC 59.673 37.037 7.45 0.00 0.00 3.71
5281 12044 2.031616 TGCACTGGTCAGCTGCTC 59.968 61.111 9.47 4.44 36.83 4.26
5641 12484 0.809636 TGGCGATGGTCAAGTATGCG 60.810 55.000 0.00 0.00 0.00 4.73
6004 12890 7.096230 CGTAACAAATAGCCTTGTTTTTCCTTG 60.096 37.037 12.70 0.00 45.10 3.61
6419 13320 1.134788 CCGTATGAGAACCTGACACCC 60.135 57.143 0.00 0.00 0.00 4.61
6541 13452 2.924290 GGACGTGCAAGTATGAGAAGTC 59.076 50.000 4.92 0.00 0.00 3.01
6542 13453 2.594654 GACGTGCAAGTATGAGAAGTCG 59.405 50.000 4.92 0.00 0.00 4.18
6819 13731 1.134670 GGGTTCCTCCGACTGATGAAG 60.135 57.143 0.00 0.00 37.00 3.02
7150 14265 6.870971 TGTTTTTCGAGTGGCTTATAGTTT 57.129 33.333 0.00 0.00 0.00 2.66
7229 14345 6.798482 TGAGATGAAAATGCCATTATCACAC 58.202 36.000 0.00 0.00 0.00 3.82
7286 14402 8.311836 TCTTCTCTGGAACACGATAAATTAACT 58.688 33.333 0.00 0.00 0.00 2.24
7451 14568 2.925966 AATGGATCTCTTGGCCCAAA 57.074 45.000 0.00 0.00 31.77 3.28
7547 14664 2.777114 TGCTGGTATGCTCCTATTCCAA 59.223 45.455 0.00 0.00 28.77 3.53
7690 14810 1.045407 TAACAACTCTCAGTGGCGGT 58.955 50.000 0.00 0.00 0.00 5.68
7871 14993 0.250209 CGCTGGCATGCTCCTATTCT 60.250 55.000 18.92 0.00 0.00 2.40
7916 15048 2.663852 CGGTCGGCTGTCGGTTTT 60.664 61.111 0.30 0.00 39.77 2.43
7978 15111 9.979897 AAATATCAAATGCCCTATATTAGCTCA 57.020 29.630 0.00 0.00 0.00 4.26
7999 15132 4.213270 TCAACCACTCTTTTATTGTCGCAG 59.787 41.667 0.00 0.00 0.00 5.18
8034 15171 2.876091 CGACTAAATCGCTGAACCTCA 58.124 47.619 0.00 0.00 45.52 3.86
8076 15213 0.315568 TTGGTAACCAACGGCATTGC 59.684 50.000 0.00 0.00 38.75 3.56
8127 15265 7.275888 ACATCTTCACAGCAAGTTTATGAAA 57.724 32.000 0.00 0.00 0.00 2.69
8152 15290 7.807977 AAATGCATATTTCTGTGTACTAGGG 57.192 36.000 0.00 0.00 30.85 3.53
8153 15291 5.290493 TGCATATTTCTGTGTACTAGGGG 57.710 43.478 0.00 0.00 0.00 4.79
8154 15292 4.966168 TGCATATTTCTGTGTACTAGGGGA 59.034 41.667 0.00 0.00 0.00 4.81
8155 15293 5.070446 TGCATATTTCTGTGTACTAGGGGAG 59.930 44.000 0.00 0.00 0.00 4.30
8156 15294 5.511545 GCATATTTCTGTGTACTAGGGGAGG 60.512 48.000 0.00 0.00 0.00 4.30
8157 15295 3.555117 TTTCTGTGTACTAGGGGAGGT 57.445 47.619 0.00 0.00 0.00 3.85
8158 15296 2.526888 TCTGTGTACTAGGGGAGGTG 57.473 55.000 0.00 0.00 0.00 4.00
8159 15297 1.006758 TCTGTGTACTAGGGGAGGTGG 59.993 57.143 0.00 0.00 0.00 4.61
8160 15298 0.616679 TGTGTACTAGGGGAGGTGGC 60.617 60.000 0.00 0.00 0.00 5.01
8161 15299 0.616679 GTGTACTAGGGGAGGTGGCA 60.617 60.000 0.00 0.00 0.00 4.92
8162 15300 0.616679 TGTACTAGGGGAGGTGGCAC 60.617 60.000 9.70 9.70 0.00 5.01
8163 15301 1.002533 TACTAGGGGAGGTGGCACC 59.997 63.158 29.32 29.32 38.99 5.01
8164 15302 2.540842 TACTAGGGGAGGTGGCACCC 62.541 65.000 32.30 22.54 45.06 4.61
8184 15322 3.100545 CCATGGGGAGTCCGAATTG 57.899 57.895 2.85 0.00 38.76 2.32
8185 15323 0.466189 CCATGGGGAGTCCGAATTGG 60.466 60.000 2.85 3.99 38.76 3.16
8186 15324 2.868725 CCATGGGGAGTCCGAATTGGA 61.869 57.143 2.85 0.00 40.10 3.53
8195 15333 1.789523 TCCGAATTGGACTAGGGGAG 58.210 55.000 0.00 0.00 43.74 4.30
8196 15334 0.759346 CCGAATTGGACTAGGGGAGG 59.241 60.000 0.00 0.00 42.00 4.30
8197 15335 0.759346 CGAATTGGACTAGGGGAGGG 59.241 60.000 0.00 0.00 0.00 4.30
8198 15336 1.141185 GAATTGGACTAGGGGAGGGG 58.859 60.000 0.00 0.00 0.00 4.79
8199 15337 0.328548 AATTGGACTAGGGGAGGGGG 60.329 60.000 0.00 0.00 0.00 5.40
8200 15338 2.934876 ATTGGACTAGGGGAGGGGGC 62.935 65.000 0.00 0.00 0.00 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.668101 CGGACTAGCTCACCTGACCC 61.668 65.000 0.00 0.00 0.00 4.46
1 2 0.680280 TCGGACTAGCTCACCTGACC 60.680 60.000 0.00 0.00 0.00 4.02
2 3 0.452585 GTCGGACTAGCTCACCTGAC 59.547 60.000 0.00 0.00 0.00 3.51
3 4 1.025113 CGTCGGACTAGCTCACCTGA 61.025 60.000 6.57 0.00 0.00 3.86
5 6 1.002379 ACGTCGGACTAGCTCACCT 60.002 57.895 6.57 0.00 0.00 4.00
6 7 1.136984 CACGTCGGACTAGCTCACC 59.863 63.158 6.57 0.00 0.00 4.02
7 8 1.136984 CCACGTCGGACTAGCTCAC 59.863 63.158 6.57 0.00 36.56 3.51
8 9 2.697761 GCCACGTCGGACTAGCTCA 61.698 63.158 6.57 0.00 36.56 4.26
9 10 2.102553 GCCACGTCGGACTAGCTC 59.897 66.667 6.57 0.00 36.56 4.09
10 11 3.812019 CGCCACGTCGGACTAGCT 61.812 66.667 6.57 0.00 36.56 3.32
32 33 3.072468 TACGGGAAGGCCTGGACG 61.072 66.667 5.69 14.13 45.41 4.79
33 34 2.582978 GTACGGGAAGGCCTGGAC 59.417 66.667 5.69 0.00 46.94 4.02
34 35 2.686106 GGTACGGGAAGGCCTGGA 60.686 66.667 5.69 0.00 45.41 3.86
35 36 3.793888 GGGTACGGGAAGGCCTGG 61.794 72.222 5.69 0.00 45.41 4.45
36 37 4.157120 CGGGTACGGGAAGGCCTG 62.157 72.222 5.69 0.00 46.62 4.85
37 38 4.709604 ACGGGTACGGGAAGGCCT 62.710 66.667 0.00 0.00 46.48 5.19
38 39 4.152964 GACGGGTACGGGAAGGCC 62.153 72.222 0.00 0.00 46.48 5.19
39 40 1.322538 TAAGACGGGTACGGGAAGGC 61.323 60.000 0.00 0.00 46.48 4.35
40 41 0.743097 CTAAGACGGGTACGGGAAGG 59.257 60.000 0.00 0.00 46.48 3.46
41 42 1.755179 TCTAAGACGGGTACGGGAAG 58.245 55.000 0.00 0.00 46.48 3.46
42 43 2.442236 ATCTAAGACGGGTACGGGAA 57.558 50.000 0.00 0.00 46.48 3.97
43 44 2.442236 AATCTAAGACGGGTACGGGA 57.558 50.000 0.00 0.00 46.48 5.14
44 45 4.614946 CTTAAATCTAAGACGGGTACGGG 58.385 47.826 0.00 0.00 46.48 5.28
45 46 4.047142 GCTTAAATCTAAGACGGGTACGG 58.953 47.826 0.00 0.00 38.74 4.02
46 47 4.738740 CAGCTTAAATCTAAGACGGGTACG 59.261 45.833 0.00 0.00 37.32 3.67
47 48 5.899299 TCAGCTTAAATCTAAGACGGGTAC 58.101 41.667 0.00 0.00 37.32 3.34
48 49 6.534475 TTCAGCTTAAATCTAAGACGGGTA 57.466 37.500 0.00 0.00 37.32 3.69
49 50 5.416271 TTCAGCTTAAATCTAAGACGGGT 57.584 39.130 0.00 0.00 37.32 5.28
50 51 6.927294 AATTCAGCTTAAATCTAAGACGGG 57.073 37.500 0.00 0.00 37.32 5.28
51 52 9.922305 CTTAAATTCAGCTTAAATCTAAGACGG 57.078 33.333 6.06 0.00 37.32 4.79
52 53 9.922305 CCTTAAATTCAGCTTAAATCTAAGACG 57.078 33.333 11.01 0.00 37.32 4.18
54 55 9.408648 CCCCTTAAATTCAGCTTAAATCTAAGA 57.591 33.333 11.01 0.00 37.32 2.10
55 56 9.190317 ACCCCTTAAATTCAGCTTAAATCTAAG 57.810 33.333 5.32 5.32 38.06 2.18
56 57 8.966868 CACCCCTTAAATTCAGCTTAAATCTAA 58.033 33.333 0.00 0.00 0.00 2.10
57 58 7.068226 GCACCCCTTAAATTCAGCTTAAATCTA 59.932 37.037 0.00 0.00 0.00 1.98
58 59 6.127338 GCACCCCTTAAATTCAGCTTAAATCT 60.127 38.462 0.00 0.00 0.00 2.40
59 60 6.042777 GCACCCCTTAAATTCAGCTTAAATC 58.957 40.000 0.00 0.00 0.00 2.17
60 61 5.104941 GGCACCCCTTAAATTCAGCTTAAAT 60.105 40.000 0.00 0.00 0.00 1.40
61 62 4.221924 GGCACCCCTTAAATTCAGCTTAAA 59.778 41.667 0.00 0.00 0.00 1.52
62 63 3.767131 GGCACCCCTTAAATTCAGCTTAA 59.233 43.478 0.00 0.00 0.00 1.85
63 64 3.361786 GGCACCCCTTAAATTCAGCTTA 58.638 45.455 0.00 0.00 0.00 3.09
64 65 2.179427 GGCACCCCTTAAATTCAGCTT 58.821 47.619 0.00 0.00 0.00 3.74
65 66 1.852633 GGCACCCCTTAAATTCAGCT 58.147 50.000 0.00 0.00 0.00 4.24
66 67 0.455815 CGGCACCCCTTAAATTCAGC 59.544 55.000 0.00 0.00 0.00 4.26
67 68 1.102978 CCGGCACCCCTTAAATTCAG 58.897 55.000 0.00 0.00 0.00 3.02
68 69 0.406361 ACCGGCACCCCTTAAATTCA 59.594 50.000 0.00 0.00 0.00 2.57
69 70 1.100510 GACCGGCACCCCTTAAATTC 58.899 55.000 0.00 0.00 0.00 2.17
70 71 0.406361 TGACCGGCACCCCTTAAATT 59.594 50.000 0.00 0.00 0.00 1.82
71 72 0.406361 TTGACCGGCACCCCTTAAAT 59.594 50.000 0.00 0.00 0.00 1.40
72 73 0.537828 GTTGACCGGCACCCCTTAAA 60.538 55.000 0.00 0.00 0.00 1.52
73 74 1.073548 GTTGACCGGCACCCCTTAA 59.926 57.895 0.00 0.00 0.00 1.85
74 75 1.493854 ATGTTGACCGGCACCCCTTA 61.494 55.000 0.00 0.00 0.00 2.69
75 76 2.840753 ATGTTGACCGGCACCCCTT 61.841 57.895 0.00 0.00 0.00 3.95
76 77 3.256960 ATGTTGACCGGCACCCCT 61.257 61.111 0.00 0.00 0.00 4.79
77 78 3.061848 CATGTTGACCGGCACCCC 61.062 66.667 0.00 0.00 0.00 4.95
78 79 3.061848 CCATGTTGACCGGCACCC 61.062 66.667 0.00 0.00 0.00 4.61
79 80 2.033448 TCCATGTTGACCGGCACC 59.967 61.111 0.00 0.00 0.00 5.01
80 81 2.677003 CGTCCATGTTGACCGGCAC 61.677 63.158 0.00 0.00 31.35 5.01
81 82 2.358125 CGTCCATGTTGACCGGCA 60.358 61.111 0.00 0.00 31.35 5.69
82 83 2.358247 ACGTCCATGTTGACCGGC 60.358 61.111 0.00 0.00 31.35 6.13
83 84 1.740296 GGACGTCCATGTTGACCGG 60.740 63.158 29.75 0.00 35.64 5.28
84 85 2.092291 CGGACGTCCATGTTGACCG 61.092 63.158 32.80 13.57 35.14 4.79
85 86 2.388232 GCGGACGTCCATGTTGACC 61.388 63.158 32.80 4.66 35.14 4.02
86 87 1.352156 GAGCGGACGTCCATGTTGAC 61.352 60.000 32.80 13.02 35.14 3.18
87 88 1.080093 GAGCGGACGTCCATGTTGA 60.080 57.895 32.80 0.00 35.14 3.18
88 89 1.354337 CTGAGCGGACGTCCATGTTG 61.354 60.000 32.80 17.77 35.14 3.33
89 90 1.079819 CTGAGCGGACGTCCATGTT 60.080 57.895 32.80 16.48 35.14 2.71
90 91 1.816863 AACTGAGCGGACGTCCATGT 61.817 55.000 32.80 19.41 35.14 3.21
91 92 0.670546 AAACTGAGCGGACGTCCATG 60.671 55.000 32.80 19.24 35.14 3.66
92 93 0.892755 TAAACTGAGCGGACGTCCAT 59.107 50.000 32.80 21.36 35.14 3.41
93 94 0.242825 CTAAACTGAGCGGACGTCCA 59.757 55.000 32.80 13.63 35.14 4.02
94 95 0.458025 CCTAAACTGAGCGGACGTCC 60.458 60.000 25.28 25.28 0.00 4.79
95 96 0.524862 TCCTAAACTGAGCGGACGTC 59.475 55.000 7.13 7.13 0.00 4.34
96 97 0.243095 GTCCTAAACTGAGCGGACGT 59.757 55.000 0.00 0.00 36.88 4.34
97 98 3.031660 GTCCTAAACTGAGCGGACG 57.968 57.895 0.00 0.00 36.88 4.79
98 99 0.524862 TCGTCCTAAACTGAGCGGAC 59.475 55.000 0.00 0.00 41.89 4.79
99 100 0.524862 GTCGTCCTAAACTGAGCGGA 59.475 55.000 0.00 0.00 0.00 5.54
100 101 0.458025 GGTCGTCCTAAACTGAGCGG 60.458 60.000 0.00 0.00 0.00 5.52
101 102 0.797249 CGGTCGTCCTAAACTGAGCG 60.797 60.000 0.00 0.00 41.79 5.03
102 103 0.458025 CCGGTCGTCCTAAACTGAGC 60.458 60.000 0.00 0.00 0.00 4.26
103 104 0.458025 GCCGGTCGTCCTAAACTGAG 60.458 60.000 1.90 0.00 0.00 3.35
104 105 0.896940 AGCCGGTCGTCCTAAACTGA 60.897 55.000 1.90 0.00 0.00 3.41
105 106 0.736325 CAGCCGGTCGTCCTAAACTG 60.736 60.000 1.90 0.00 0.00 3.16
106 107 1.590147 CAGCCGGTCGTCCTAAACT 59.410 57.895 1.90 0.00 0.00 2.66
107 108 1.447314 CCAGCCGGTCGTCCTAAAC 60.447 63.158 1.90 0.00 0.00 2.01
108 109 1.909781 ACCAGCCGGTCGTCCTAAA 60.910 57.895 1.90 0.00 44.71 1.85
109 110 2.283388 ACCAGCCGGTCGTCCTAA 60.283 61.111 1.90 0.00 44.71 2.69
118 119 4.745751 TAACCGCGAACCAGCCGG 62.746 66.667 8.23 0.00 37.04 6.13
119 120 3.484547 GTAACCGCGAACCAGCCG 61.485 66.667 8.23 0.00 0.00 5.52
120 121 3.484547 CGTAACCGCGAACCAGCC 61.485 66.667 8.23 0.00 0.00 4.85
121 122 2.735857 ACGTAACCGCGAACCAGC 60.736 61.111 8.23 0.00 37.70 4.85
122 123 1.372004 TCACGTAACCGCGAACCAG 60.372 57.895 8.23 0.00 37.70 4.00
123 124 1.661197 GTCACGTAACCGCGAACCA 60.661 57.895 8.23 0.00 37.70 3.67
124 125 2.374995 GGTCACGTAACCGCGAACC 61.375 63.158 8.23 0.00 37.70 3.62
125 126 3.149993 GGTCACGTAACCGCGAAC 58.850 61.111 8.23 1.29 37.70 3.95
131 132 2.739671 GTGCCCGGTCACGTAACC 60.740 66.667 0.00 0.00 38.78 2.85
132 133 2.025418 CAGTGCCCGGTCACGTAAC 61.025 63.158 10.43 0.00 41.61 2.50
133 134 1.537814 ATCAGTGCCCGGTCACGTAA 61.538 55.000 10.43 0.00 41.61 3.18
134 135 1.537814 AATCAGTGCCCGGTCACGTA 61.538 55.000 10.43 2.46 41.61 3.57
135 136 2.879233 AATCAGTGCCCGGTCACGT 61.879 57.895 10.43 0.00 41.61 4.49
136 137 2.047274 AATCAGTGCCCGGTCACG 60.047 61.111 10.43 5.57 41.61 4.35
137 138 2.040544 CCAATCAGTGCCCGGTCAC 61.041 63.158 7.75 7.75 37.24 3.67
138 139 2.350895 CCAATCAGTGCCCGGTCA 59.649 61.111 0.00 0.00 0.00 4.02
139 140 2.438434 CCCAATCAGTGCCCGGTC 60.438 66.667 0.00 0.00 0.00 4.79
140 141 4.740822 GCCCAATCAGTGCCCGGT 62.741 66.667 0.00 0.00 0.00 5.28
143 144 4.740822 ACGGCCCAATCAGTGCCC 62.741 66.667 0.00 0.00 42.29 5.36
144 145 3.134127 GACGGCCCAATCAGTGCC 61.134 66.667 0.00 0.00 41.85 5.01
145 146 3.134127 GGACGGCCCAATCAGTGC 61.134 66.667 0.00 0.00 34.14 4.40
146 147 2.350895 TGGACGGCCCAATCAGTG 59.649 61.111 3.83 0.00 43.29 3.66
158 159 2.210116 CCCAACTTTATCCGATGGACG 58.790 52.381 0.00 0.00 42.18 4.79
159 160 2.171870 TCCCCAACTTTATCCGATGGAC 59.828 50.000 0.00 0.00 32.98 4.02
160 161 2.438021 CTCCCCAACTTTATCCGATGGA 59.562 50.000 0.00 0.00 35.55 3.41
161 162 2.851195 CTCCCCAACTTTATCCGATGG 58.149 52.381 0.00 0.00 0.00 3.51
162 163 2.222027 GCTCCCCAACTTTATCCGATG 58.778 52.381 0.00 0.00 0.00 3.84
163 164 1.143073 GGCTCCCCAACTTTATCCGAT 59.857 52.381 0.00 0.00 0.00 4.18
164 165 0.544697 GGCTCCCCAACTTTATCCGA 59.455 55.000 0.00 0.00 0.00 4.55
165 166 0.814010 CGGCTCCCCAACTTTATCCG 60.814 60.000 0.00 0.00 0.00 4.18
166 167 0.465642 CCGGCTCCCCAACTTTATCC 60.466 60.000 0.00 0.00 0.00 2.59
167 168 0.465642 CCCGGCTCCCCAACTTTATC 60.466 60.000 0.00 0.00 0.00 1.75
168 169 1.613061 CCCGGCTCCCCAACTTTAT 59.387 57.895 0.00 0.00 0.00 1.40
169 170 3.083386 CCCGGCTCCCCAACTTTA 58.917 61.111 0.00 0.00 0.00 1.85
170 171 4.678743 GCCCGGCTCCCCAACTTT 62.679 66.667 0.71 0.00 0.00 2.66
178 179 2.479820 AAAAGGTACAGCCCGGCTCC 62.480 60.000 9.68 8.36 36.40 4.70
179 180 0.608308 AAAAAGGTACAGCCCGGCTC 60.608 55.000 9.68 0.00 36.40 4.70
180 181 1.458927 AAAAAGGTACAGCCCGGCT 59.541 52.632 5.94 5.94 40.77 5.52
181 182 4.090723 AAAAAGGTACAGCCCGGC 57.909 55.556 0.00 0.00 38.26 6.13
196 197 9.311916 CAACTATTCACACAAGGAAATCAAAAA 57.688 29.630 0.00 0.00 0.00 1.94
197 198 7.437862 GCAACTATTCACACAAGGAAATCAAAA 59.562 33.333 0.00 0.00 0.00 2.44
198 199 6.922957 GCAACTATTCACACAAGGAAATCAAA 59.077 34.615 0.00 0.00 0.00 2.69
199 200 6.265196 AGCAACTATTCACACAAGGAAATCAA 59.735 34.615 0.00 0.00 0.00 2.57
200 201 5.769662 AGCAACTATTCACACAAGGAAATCA 59.230 36.000 0.00 0.00 0.00 2.57
201 202 6.259550 AGCAACTATTCACACAAGGAAATC 57.740 37.500 0.00 0.00 0.00 2.17
202 203 6.294731 GGAAGCAACTATTCACACAAGGAAAT 60.295 38.462 0.00 0.00 0.00 2.17
203 204 5.009610 GGAAGCAACTATTCACACAAGGAAA 59.990 40.000 0.00 0.00 0.00 3.13
204 205 4.518970 GGAAGCAACTATTCACACAAGGAA 59.481 41.667 0.00 0.00 0.00 3.36
205 206 4.072131 GGAAGCAACTATTCACACAAGGA 58.928 43.478 0.00 0.00 0.00 3.36
206 207 3.191371 GGGAAGCAACTATTCACACAAGG 59.809 47.826 0.00 0.00 30.15 3.61
207 208 3.120199 CGGGAAGCAACTATTCACACAAG 60.120 47.826 0.00 0.00 30.15 3.16
208 209 2.811431 CGGGAAGCAACTATTCACACAA 59.189 45.455 0.00 0.00 30.15 3.33
209 210 2.224426 ACGGGAAGCAACTATTCACACA 60.224 45.455 0.00 0.00 30.15 3.72
210 211 2.415512 GACGGGAAGCAACTATTCACAC 59.584 50.000 0.00 0.00 30.15 3.82
211 212 2.614481 GGACGGGAAGCAACTATTCACA 60.614 50.000 0.00 0.00 30.15 3.58
212 213 2.007608 GGACGGGAAGCAACTATTCAC 58.992 52.381 0.00 0.00 0.00 3.18
229 230 1.022451 ACACACACACACCAACGGAC 61.022 55.000 0.00 0.00 0.00 4.79
286 296 1.451747 GTCGCTCTCCTCCGTACCT 60.452 63.158 0.00 0.00 0.00 3.08
294 304 2.651361 CAACCACGTCGCTCTCCT 59.349 61.111 0.00 0.00 0.00 3.69
297 307 3.923864 TGCCAACCACGTCGCTCT 61.924 61.111 0.00 0.00 0.00 4.09
305 315 2.358247 ATCCGACGTGCCAACCAC 60.358 61.111 0.00 0.00 41.15 4.16
306 316 2.047655 GATCCGACGTGCCAACCA 60.048 61.111 0.00 0.00 0.00 3.67
308 318 3.186047 CCGATCCGACGTGCCAAC 61.186 66.667 0.00 0.00 0.00 3.77
365 384 1.028130 GCTCCCGGTGTAGTACTACC 58.972 60.000 26.41 16.23 35.26 3.18
366 385 2.049888 AGCTCCCGGTGTAGTACTAC 57.950 55.000 23.58 23.58 36.63 2.73
367 386 2.025981 TCAAGCTCCCGGTGTAGTACTA 60.026 50.000 0.00 0.00 0.00 1.82
368 387 1.183549 CAAGCTCCCGGTGTAGTACT 58.816 55.000 0.00 0.00 0.00 2.73
369 388 1.134560 CTCAAGCTCCCGGTGTAGTAC 59.865 57.143 0.00 0.00 0.00 2.73
370 389 1.471119 CTCAAGCTCCCGGTGTAGTA 58.529 55.000 0.00 0.00 0.00 1.82
371 390 1.258445 CCTCAAGCTCCCGGTGTAGT 61.258 60.000 0.00 0.00 0.00 2.73
372 391 1.517832 CCTCAAGCTCCCGGTGTAG 59.482 63.158 0.00 0.00 0.00 2.74
373 392 2.656069 GCCTCAAGCTCCCGGTGTA 61.656 63.158 0.00 0.00 38.99 2.90
374 393 4.021925 GCCTCAAGCTCCCGGTGT 62.022 66.667 0.00 0.00 38.99 4.16
375 394 4.785453 GGCCTCAAGCTCCCGGTG 62.785 72.222 0.00 0.00 43.05 4.94
378 397 4.082523 TTCGGCCTCAAGCTCCCG 62.083 66.667 0.00 0.00 43.05 5.14
379 398 2.124942 CTTCGGCCTCAAGCTCCC 60.125 66.667 0.00 0.00 43.05 4.30
380 399 2.821810 GCTTCGGCCTCAAGCTCC 60.822 66.667 22.91 1.61 42.63 4.70
399 418 0.460311 CATCTACTCCCGGTGTGTCC 59.540 60.000 0.00 0.00 0.00 4.02
400 419 1.405821 CTCATCTACTCCCGGTGTGTC 59.594 57.143 0.00 0.00 0.00 3.67
401 420 1.475403 CTCATCTACTCCCGGTGTGT 58.525 55.000 0.00 1.69 0.00 3.72
402 421 0.747255 CCTCATCTACTCCCGGTGTG 59.253 60.000 0.00 0.00 0.00 3.82
403 422 0.335361 ACCTCATCTACTCCCGGTGT 59.665 55.000 0.00 1.01 0.00 4.16
404 423 1.033574 GACCTCATCTACTCCCGGTG 58.966 60.000 0.00 0.00 0.00 4.94
405 424 0.629596 TGACCTCATCTACTCCCGGT 59.370 55.000 0.00 0.00 0.00 5.28
406 425 1.776662 TTGACCTCATCTACTCCCGG 58.223 55.000 0.00 0.00 0.00 5.73
407 426 2.101582 CCTTTGACCTCATCTACTCCCG 59.898 54.545 0.00 0.00 0.00 5.14
408 427 2.158885 GCCTTTGACCTCATCTACTCCC 60.159 54.545 0.00 0.00 0.00 4.30
409 428 2.769095 AGCCTTTGACCTCATCTACTCC 59.231 50.000 0.00 0.00 0.00 3.85
410 429 4.187694 CAAGCCTTTGACCTCATCTACTC 58.812 47.826 0.00 0.00 36.36 2.59
411 430 3.054802 CCAAGCCTTTGACCTCATCTACT 60.055 47.826 0.00 0.00 36.36 2.57
414 433 1.988107 TCCAAGCCTTTGACCTCATCT 59.012 47.619 0.00 0.00 36.36 2.90
429 448 1.912043 AGTGGAGTGGGAGATTCCAAG 59.088 52.381 0.00 0.00 41.89 3.61
430 449 1.630369 CAGTGGAGTGGGAGATTCCAA 59.370 52.381 0.00 0.00 41.89 3.53
432 451 0.107459 GCAGTGGAGTGGGAGATTCC 60.107 60.000 0.00 0.00 35.23 3.01
434 453 0.842030 TGGCAGTGGAGTGGGAGATT 60.842 55.000 0.00 0.00 0.00 2.40
436 455 2.204034 TGGCAGTGGAGTGGGAGA 59.796 61.111 0.00 0.00 0.00 3.71
437 456 2.348998 GTGGCAGTGGAGTGGGAG 59.651 66.667 0.00 0.00 0.00 4.30
438 457 3.625897 CGTGGCAGTGGAGTGGGA 61.626 66.667 0.00 0.00 0.00 4.37
439 458 4.704833 CCGTGGCAGTGGAGTGGG 62.705 72.222 0.00 0.00 0.00 4.61
440 459 2.469465 ATTCCGTGGCAGTGGAGTGG 62.469 60.000 8.28 0.00 35.26 4.00
441 460 1.003355 ATTCCGTGGCAGTGGAGTG 60.003 57.895 8.28 0.00 35.26 3.51
442 461 1.194781 AGATTCCGTGGCAGTGGAGT 61.195 55.000 8.28 6.03 35.26 3.85
443 462 0.460987 GAGATTCCGTGGCAGTGGAG 60.461 60.000 8.28 0.00 35.26 3.86
444 463 1.596934 GAGATTCCGTGGCAGTGGA 59.403 57.895 4.34 4.34 0.00 4.02
445 464 1.811266 CGAGATTCCGTGGCAGTGG 60.811 63.158 0.00 0.00 0.00 4.00
446 465 0.803768 CTCGAGATTCCGTGGCAGTG 60.804 60.000 6.58 0.00 0.00 3.66
447 466 1.251527 ACTCGAGATTCCGTGGCAGT 61.252 55.000 21.68 0.00 0.00 4.40
480 499 3.381049 AGAGGGGCAGGGGGAGAT 61.381 66.667 0.00 0.00 0.00 2.75
481 500 4.095400 GAGAGGGGCAGGGGGAGA 62.095 72.222 0.00 0.00 0.00 3.71
517 537 3.610669 CTATCCGCTCCGCTGGCT 61.611 66.667 0.00 0.00 0.00 4.75
524 544 1.811645 GAGACTGGGCTATCCGCTCC 61.812 65.000 0.00 0.00 38.81 4.70
525 545 1.663173 GAGACTGGGCTATCCGCTC 59.337 63.158 0.00 0.00 40.51 5.03
526 546 2.196925 CGAGACTGGGCTATCCGCT 61.197 63.158 0.00 0.00 38.76 5.52
527 547 2.336809 CGAGACTGGGCTATCCGC 59.663 66.667 0.00 0.00 38.76 5.54
549 577 0.756070 GTTCCGGGAGTAGAGGAGGG 60.756 65.000 0.00 0.00 35.23 4.30
585 613 2.864343 GTGTCCTTATCCGGTTCGAATG 59.136 50.000 0.00 0.00 0.00 2.67
633 662 4.933064 CGGACGGATCCTCTGCGC 62.933 72.222 10.75 0.00 43.35 6.09
750 829 3.072211 GCCGGGTATTTATAGTTGCTCC 58.928 50.000 2.18 0.00 0.00 4.70
909 999 1.837533 ATGGAGAGGGGGTGAGGGAA 61.838 60.000 0.00 0.00 0.00 3.97
910 1000 2.257541 GATGGAGAGGGGGTGAGGGA 62.258 65.000 0.00 0.00 0.00 4.20
911 1001 1.768077 GATGGAGAGGGGGTGAGGG 60.768 68.421 0.00 0.00 0.00 4.30
912 1002 0.762461 GAGATGGAGAGGGGGTGAGG 60.762 65.000 0.00 0.00 0.00 3.86
914 1004 1.314867 GGAGATGGAGAGGGGGTGA 59.685 63.158 0.00 0.00 0.00 4.02
915 1005 1.768077 GGGAGATGGAGAGGGGGTG 60.768 68.421 0.00 0.00 0.00 4.61
916 1006 1.949449 AGGGAGATGGAGAGGGGGT 60.949 63.158 0.00 0.00 0.00 4.95
917 1007 1.152139 GAGGGAGATGGAGAGGGGG 60.152 68.421 0.00 0.00 0.00 5.40
919 1009 1.152139 GGGAGGGAGATGGAGAGGG 60.152 68.421 0.00 0.00 0.00 4.30
921 1011 0.178935 GGAGGGAGGGAGATGGAGAG 60.179 65.000 0.00 0.00 0.00 3.20
922 1012 1.669927 GGGAGGGAGGGAGATGGAGA 61.670 65.000 0.00 0.00 0.00 3.71
923 1013 1.152139 GGGAGGGAGGGAGATGGAG 60.152 68.421 0.00 0.00 0.00 3.86
924 1014 3.037715 GGGAGGGAGGGAGATGGA 58.962 66.667 0.00 0.00 0.00 3.41
926 1016 3.237741 GCGGGAGGGAGGGAGATG 61.238 72.222 0.00 0.00 0.00 2.90
927 1017 3.443479 AGCGGGAGGGAGGGAGAT 61.443 66.667 0.00 0.00 0.00 2.75
928 1018 4.144727 GAGCGGGAGGGAGGGAGA 62.145 72.222 0.00 0.00 0.00 3.71
932 1022 2.965226 TTATGGGAGCGGGAGGGAGG 62.965 65.000 0.00 0.00 0.00 4.30
933 1023 1.054406 TTTATGGGAGCGGGAGGGAG 61.054 60.000 0.00 0.00 0.00 4.30
934 1024 1.003704 TTTATGGGAGCGGGAGGGA 59.996 57.895 0.00 0.00 0.00 4.20
935 1025 1.451936 CTTTATGGGAGCGGGAGGG 59.548 63.158 0.00 0.00 0.00 4.30
1177 1277 4.719369 GTCCTCGAGCACGCGGTT 62.719 66.667 12.47 0.00 43.71 4.44
1301 1409 0.607620 AACAGACAGGCAGAGAGCTC 59.392 55.000 5.27 5.27 44.79 4.09
1320 1428 4.360964 CGTACCCGGCGGACACAA 62.361 66.667 30.79 4.36 0.00 3.33
1330 1446 1.378882 TAGTAGCTGCACCGTACCCG 61.379 60.000 4.12 0.00 0.00 5.28
1466 1598 0.557238 TGAATGGATGGATGGGTGGG 59.443 55.000 0.00 0.00 0.00 4.61
1470 1602 2.428171 GTGTGTTGAATGGATGGATGGG 59.572 50.000 0.00 0.00 0.00 4.00
1496 1641 6.599244 TCTTCTTTCAGAAACACACAGTGATT 59.401 34.615 7.81 0.00 33.19 2.57
1497 1642 6.115446 TCTTCTTTCAGAAACACACAGTGAT 58.885 36.000 7.81 0.00 33.19 3.06
1498 1643 5.487433 TCTTCTTTCAGAAACACACAGTGA 58.513 37.500 7.81 0.00 33.19 3.41
1499 1644 5.801350 TCTTCTTTCAGAAACACACAGTG 57.199 39.130 0.00 0.00 33.19 3.66
1500 1645 5.882557 ACATCTTCTTTCAGAAACACACAGT 59.117 36.000 0.00 0.00 33.19 3.55
1672 1847 4.525028 AGTGGGTGGGTGGGTGGA 62.525 66.667 0.00 0.00 0.00 4.02
1829 3427 3.009026 TGCTGTTCATCAACGTATGCAT 58.991 40.909 3.79 3.79 34.95 3.96
1861 3470 2.933260 GAGCCTCTCGTCAAATCCTTTC 59.067 50.000 0.00 0.00 0.00 2.62
1877 3486 1.202330 CTGAGGTCTTCCATGAGCCT 58.798 55.000 0.00 0.00 35.28 4.58
1943 3555 2.167398 TTGGGGCTCGAGAAAGACCG 62.167 60.000 18.75 0.00 46.45 4.79
1984 3596 2.552373 GGGAGACAGTGGGTAAACAAGG 60.552 54.545 0.00 0.00 0.00 3.61
2060 5455 0.604578 CACCACTGCATCTTTTGGGG 59.395 55.000 0.00 0.00 33.00 4.96
2079 5474 2.036862 ACCACGACCTACCAGAAAAGTC 59.963 50.000 0.00 0.00 0.00 3.01
2093 5488 0.865769 AAATTCTGCGACACCACGAC 59.134 50.000 0.00 0.00 35.09 4.34
2230 5737 2.615227 GATAGGCTGCCCACCACCAG 62.615 65.000 16.57 0.00 0.00 4.00
2244 5751 2.813779 GCAAACTGCACGAAGATAGG 57.186 50.000 0.00 0.00 44.26 2.57
2263 5776 9.199982 GCAAGTGATTTGGATGAATTATTATGG 57.800 33.333 0.00 0.00 37.26 2.74
2275 5792 3.705051 AGACATGGCAAGTGATTTGGAT 58.295 40.909 0.00 0.00 37.26 3.41
2289 5806 4.796038 AAAGCATGGAGAAAAGACATGG 57.204 40.909 0.00 0.00 41.62 3.66
2615 6173 6.642950 AGCAGCGTAGATAGCTACAAAATAAG 59.357 38.462 17.74 1.32 45.87 1.73
2743 6301 7.721286 ATAAGTGTATAACAATGCTCTGAGC 57.279 36.000 22.38 22.38 42.82 4.26
2744 6302 9.973450 AGTATAAGTGTATAACAATGCTCTGAG 57.027 33.333 0.00 0.00 0.00 3.35
2746 6304 8.982685 CCAGTATAAGTGTATAACAATGCTCTG 58.017 37.037 0.00 0.00 0.00 3.35
2748 6306 9.197694 CTCCAGTATAAGTGTATAACAATGCTC 57.802 37.037 0.00 0.00 0.00 4.26
2749 6307 7.657761 GCTCCAGTATAAGTGTATAACAATGCT 59.342 37.037 0.00 0.00 0.00 3.79
2750 6308 7.441157 TGCTCCAGTATAAGTGTATAACAATGC 59.559 37.037 0.00 0.00 0.00 3.56
2751 6309 8.765219 GTGCTCCAGTATAAGTGTATAACAATG 58.235 37.037 0.00 0.00 0.00 2.82
2752 6310 8.482943 TGTGCTCCAGTATAAGTGTATAACAAT 58.517 33.333 0.00 0.00 0.00 2.71
2753 6311 7.842982 TGTGCTCCAGTATAAGTGTATAACAA 58.157 34.615 0.00 0.00 0.00 2.83
2754 6312 7.412853 TGTGCTCCAGTATAAGTGTATAACA 57.587 36.000 0.00 0.00 0.00 2.41
2755 6313 8.361139 AGATGTGCTCCAGTATAAGTGTATAAC 58.639 37.037 0.00 0.00 0.00 1.89
2756 6314 8.478775 AGATGTGCTCCAGTATAAGTGTATAA 57.521 34.615 0.00 0.00 0.00 0.98
2757 6315 9.755122 ATAGATGTGCTCCAGTATAAGTGTATA 57.245 33.333 0.00 0.00 0.00 1.47
2758 6316 6.985653 AGATGTGCTCCAGTATAAGTGTAT 57.014 37.500 0.00 0.00 0.00 2.29
2759 6317 9.755122 ATATAGATGTGCTCCAGTATAAGTGTA 57.245 33.333 0.00 0.00 0.00 2.90
2760 6318 6.985653 ATAGATGTGCTCCAGTATAAGTGT 57.014 37.500 0.00 0.00 0.00 3.55
2761 6319 8.526978 ACATATAGATGTGCTCCAGTATAAGTG 58.473 37.037 1.31 0.00 44.90 3.16
2762 6320 8.657387 ACATATAGATGTGCTCCAGTATAAGT 57.343 34.615 1.31 0.00 44.90 2.24
2785 6351 7.781056 TGCTATCATAAGTAATCAGTCACACA 58.219 34.615 0.00 0.00 0.00 3.72
2870 6803 2.806244 GAGGAGCTCTGTAGATCGAGAC 59.194 54.545 14.64 0.00 39.11 3.36
3102 7696 3.403228 AAGATGGTGCCCATGGTATTT 57.597 42.857 11.73 0.00 45.26 1.40
3103 7697 3.463329 ACTAAGATGGTGCCCATGGTATT 59.537 43.478 11.73 0.00 45.26 1.89
3104 7698 3.056080 ACTAAGATGGTGCCCATGGTAT 58.944 45.455 11.73 0.00 45.26 2.73
3105 7699 2.487775 ACTAAGATGGTGCCCATGGTA 58.512 47.619 11.73 0.00 45.26 3.25
3106 7700 1.298953 ACTAAGATGGTGCCCATGGT 58.701 50.000 11.73 0.00 45.26 3.55
3162 7756 2.928116 ACAGCGCTCGGTTTTATAACTC 59.072 45.455 7.13 0.00 34.59 3.01
3175 7769 5.065474 TGGGTAATGTAAAAATACAGCGCTC 59.935 40.000 7.13 0.00 32.97 5.03
3178 7772 7.022055 TCATGGGTAATGTAAAAATACAGCG 57.978 36.000 0.00 0.00 37.56 5.18
3189 7783 4.578516 CGCTCCAAATTCATGGGTAATGTA 59.421 41.667 0.00 0.00 41.05 2.29
3273 7876 8.730680 CAAGTTGATAAGTGTAGCAATTAAGGT 58.269 33.333 0.00 0.00 37.89 3.50
3279 7882 9.448438 TGATAACAAGTTGATAAGTGTAGCAAT 57.552 29.630 10.54 0.00 37.89 3.56
3280 7883 8.840833 TGATAACAAGTTGATAAGTGTAGCAA 57.159 30.769 10.54 0.00 33.29 3.91
3281 7884 8.840833 TTGATAACAAGTTGATAAGTGTAGCA 57.159 30.769 10.54 0.00 0.00 3.49
3296 7899 5.185454 TCTACAGGGCACATTGATAACAAG 58.815 41.667 0.00 0.00 39.46 3.16
3375 8013 7.755373 GTCAGGCAATATTTTACTCAAGGAAAC 59.245 37.037 0.00 0.00 0.00 2.78
3405 8044 3.550437 AACCATCTGTCTCCTGCATAC 57.450 47.619 0.00 0.00 0.00 2.39
3482 8123 8.936070 AAGCATTCACGTATGTAATGTAACTA 57.064 30.769 13.82 0.00 33.96 2.24
3900 9367 8.748412 TGTAAATATGTAAGAAAAAGGCATGCT 58.252 29.630 18.92 0.11 0.00 3.79
4013 9485 7.309438 GCAGAATGAAAAAGGAAGACTGGTTAT 60.309 37.037 0.00 0.00 39.69 1.89
4311 9796 8.721478 ACTACAACAAGCAATATTAGTGTCTTG 58.279 33.333 18.17 18.17 36.77 3.02
4360 9849 6.092955 ACTTTCATGTGAATCTGCAACAAT 57.907 33.333 0.00 0.00 33.54 2.71
4511 10550 1.222936 CCCTGCCTTTCGAGCTCAT 59.777 57.895 15.40 0.00 0.00 2.90
4550 10589 5.013704 TGCTCTTGAAGTCCCTACCAAAATA 59.986 40.000 0.00 0.00 0.00 1.40
4633 10672 4.685169 ACTATGTTGCAGCACAATGTAC 57.315 40.909 5.00 0.00 41.27 2.90
4639 10678 3.738982 ACTTGTACTATGTTGCAGCACA 58.261 40.909 5.00 0.00 0.00 4.57
4744 11198 1.683943 TGAAAGGCATGATAGGCTGC 58.316 50.000 0.00 0.00 44.47 5.25
5005 11460 1.534336 AAGCGGCCAATGCATGTGAA 61.534 50.000 2.24 0.00 40.13 3.18
5007 11462 1.807981 CAAGCGGCCAATGCATGTG 60.808 57.895 2.24 0.69 40.13 3.21
5094 11552 4.868171 TCGATGCGCTAAATACTTCACTTT 59.132 37.500 9.73 0.00 0.00 2.66
5141 11599 0.397564 TCCAGCAGCACATCTTCACA 59.602 50.000 0.00 0.00 0.00 3.58
5142 11600 0.801251 GTCCAGCAGCACATCTTCAC 59.199 55.000 0.00 0.00 0.00 3.18
5143 11601 0.397564 TGTCCAGCAGCACATCTTCA 59.602 50.000 0.00 0.00 0.00 3.02
5556 12399 2.629617 CTGGTGCAAATAATCCATCCCC 59.370 50.000 0.00 0.00 0.00 4.81
6043 12929 8.747538 AATAACGAAGGTCTGGCTTTATTTAT 57.252 30.769 0.00 0.00 0.00 1.40
6541 13452 0.314935 ACAAACAAGGAGCAATGCCG 59.685 50.000 0.00 0.00 0.00 5.69
6542 13453 1.340889 TGACAAACAAGGAGCAATGCC 59.659 47.619 0.00 0.00 0.00 4.40
7118 14232 4.679654 GCCACTCGAAAAACAAATAACCAG 59.320 41.667 0.00 0.00 0.00 4.00
7133 14247 3.259876 ACACCAAACTATAAGCCACTCGA 59.740 43.478 0.00 0.00 0.00 4.04
7150 14265 5.152623 TGAACCAAAATTCAAACACACCA 57.847 34.783 0.00 0.00 35.65 4.17
7264 14380 8.928270 ACTAGTTAATTTATCGTGTTCCAGAG 57.072 34.615 0.00 0.00 0.00 3.35
7286 14402 3.701241 CCAAACGAAGCTGCAAAAACTA 58.299 40.909 1.02 0.00 0.00 2.24
7404 14521 1.940883 GCCGAGATGGTCACGTGGTA 61.941 60.000 17.00 2.57 41.21 3.25
7547 14664 2.106166 CTCCCTGCCATCTAGAAAGCAT 59.894 50.000 17.52 0.00 34.16 3.79
7871 14993 3.374764 TCCCTGCATCTAGAAAGCACTA 58.625 45.455 16.57 5.32 34.13 2.74
7906 15038 3.886123 AGGATAATGGGAAAACCGACAG 58.114 45.455 0.00 0.00 44.64 3.51
7916 15048 6.500751 GGATAGGACACTAAAGGATAATGGGA 59.499 42.308 0.00 0.00 31.86 4.37
7978 15111 3.058224 GCTGCGACAATAAAAGAGTGGTT 60.058 43.478 0.00 0.00 0.00 3.67
7999 15132 5.651172 TTTAGTCGTGTGTATATGCATGC 57.349 39.130 11.82 11.82 0.00 4.06
8024 15161 2.157738 AGTTTCTGCATGAGGTTCAGC 58.842 47.619 0.00 0.00 0.00 4.26
8034 15171 7.012704 CCAAGTTATAGCACATAGTTTCTGCAT 59.987 37.037 0.00 0.00 33.06 3.96
8127 15265 7.285401 CCCCTAGTACACAGAAATATGCATTTT 59.715 37.037 3.54 0.00 34.44 1.82
8165 15303 0.466189 CAATTCGGACTCCCCATGGG 60.466 60.000 25.30 25.30 46.11 4.00
8166 15304 0.466189 CCAATTCGGACTCCCCATGG 60.466 60.000 4.14 4.14 36.56 3.66
8167 15305 0.546122 TCCAATTCGGACTCCCCATG 59.454 55.000 0.00 0.00 39.64 3.66
8168 15306 3.021356 TCCAATTCGGACTCCCCAT 57.979 52.632 0.00 0.00 39.64 4.00
8169 15307 4.571236 TCCAATTCGGACTCCCCA 57.429 55.556 0.00 0.00 39.64 4.96
8176 15314 1.691482 CCTCCCCTAGTCCAATTCGGA 60.691 57.143 0.00 0.00 43.61 4.55
8177 15315 0.759346 CCTCCCCTAGTCCAATTCGG 59.241 60.000 0.00 0.00 0.00 4.30
8178 15316 0.759346 CCCTCCCCTAGTCCAATTCG 59.241 60.000 0.00 0.00 0.00 3.34
8179 15317 1.141185 CCCCTCCCCTAGTCCAATTC 58.859 60.000 0.00 0.00 0.00 2.17
8180 15318 0.328548 CCCCCTCCCCTAGTCCAATT 60.329 60.000 0.00 0.00 0.00 2.32
8181 15319 1.321943 CCCCCTCCCCTAGTCCAAT 59.678 63.158 0.00 0.00 0.00 3.16
8182 15320 2.792222 CCCCCTCCCCTAGTCCAA 59.208 66.667 0.00 0.00 0.00 3.53
8183 15321 4.103928 GCCCCCTCCCCTAGTCCA 62.104 72.222 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.