Multiple sequence alignment - TraesCS2D01G587200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G587200 chr2D 100.000 2692 0 0 1 2692 645043324 645046015 0.000000e+00 4972.0
1 TraesCS2D01G587200 chr2D 95.455 264 9 2 2059 2321 125439241 125438980 4.150000e-113 418.0
2 TraesCS2D01G587200 chr2A 85.145 1555 66 77 609 2058 770409712 770411206 0.000000e+00 1439.0
3 TraesCS2D01G587200 chr2A 87.733 375 30 7 2318 2685 770411212 770411577 8.910000e-115 424.0
4 TraesCS2D01G587200 chr2A 96.484 256 6 2 2062 2317 477246387 477246135 1.150000e-113 420.0
5 TraesCS2D01G587200 chr2B 86.287 1247 41 62 855 2058 790444519 790443360 0.000000e+00 1236.0
6 TraesCS2D01G587200 chr2B 87.887 388 18 15 2307 2685 790443347 790442980 1.910000e-116 429.0
7 TraesCS2D01G587200 chr5D 92.336 535 38 3 1 533 464910471 464909938 0.000000e+00 758.0
8 TraesCS2D01G587200 chr5D 89.004 482 48 5 1 480 484224035 484223557 2.310000e-165 592.0
9 TraesCS2D01G587200 chr4D 86.778 537 56 12 3 533 501676534 501676007 3.860000e-163 584.0
10 TraesCS2D01G587200 chr4D 86.475 488 50 10 1 480 486749409 486748930 3.070000e-144 521.0
11 TraesCS2D01G587200 chr4D 89.333 75 5 2 466 539 497608058 497607986 1.030000e-14 91.6
12 TraesCS2D01G587200 chr4D 91.111 45 4 0 1176 1220 322907719 322907763 8.050000e-06 62.1
13 TraesCS2D01G587200 chr1D 86.194 536 58 12 3 533 221909820 221910344 1.400000e-157 566.0
14 TraesCS2D01G587200 chr1D 88.535 471 46 7 3 469 202495093 202494627 5.030000e-157 564.0
15 TraesCS2D01G587200 chr6D 84.871 542 69 10 1 538 27469281 27469813 3.940000e-148 534.0
16 TraesCS2D01G587200 chr6D 91.549 71 5 1 464 533 4427693 4427623 2.210000e-16 97.1
17 TraesCS2D01G587200 chr6D 91.429 70 5 1 464 533 25284276 25284208 7.930000e-16 95.3
18 TraesCS2D01G587200 chr3B 88.063 444 49 4 3 445 822783987 822784427 8.540000e-145 523.0
19 TraesCS2D01G587200 chr6A 83.925 535 71 11 1 530 106836956 106837480 5.180000e-137 497.0
20 TraesCS2D01G587200 chr6A 96.471 255 7 1 2059 2313 169789159 169789411 1.150000e-113 420.0
21 TraesCS2D01G587200 chr6A 91.304 69 6 0 464 532 72917123 72917191 7.930000e-16 95.3
22 TraesCS2D01G587200 chr5A 96.139 259 8 2 2059 2317 367963074 367962818 3.200000e-114 422.0
23 TraesCS2D01G587200 chr5A 94.526 274 12 2 2059 2331 665445596 665445867 1.150000e-113 420.0
24 TraesCS2D01G587200 chr5A 95.437 263 8 3 2059 2320 309393281 309393540 1.490000e-112 416.0
25 TraesCS2D01G587200 chr3A 96.471 255 7 1 2059 2313 58275063 58274811 1.150000e-113 420.0
26 TraesCS2D01G587200 chr3A 95.437 263 8 3 2059 2320 503188007 503187748 1.490000e-112 416.0
27 TraesCS2D01G587200 chr7A 95.437 263 8 3 2059 2320 404836679 404836938 1.490000e-112 416.0
28 TraesCS2D01G587200 chr7A 91.549 71 5 1 464 533 598214105 598214035 2.210000e-16 97.1
29 TraesCS2D01G587200 chr7D 96.373 193 7 0 1099 1291 319910304 319910112 4.320000e-83 318.0
30 TraesCS2D01G587200 chr3D 94.286 70 3 1 464 533 362040718 362040650 3.670000e-19 106.0
31 TraesCS2D01G587200 chr4A 93.056 72 4 1 464 534 186164460 186164389 1.320000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G587200 chr2D 645043324 645046015 2691 False 4972.0 4972 100.000 1 2692 1 chr2D.!!$F1 2691
1 TraesCS2D01G587200 chr2A 770409712 770411577 1865 False 931.5 1439 86.439 609 2685 2 chr2A.!!$F1 2076
2 TraesCS2D01G587200 chr2B 790442980 790444519 1539 True 832.5 1236 87.087 855 2685 2 chr2B.!!$R1 1830
3 TraesCS2D01G587200 chr5D 464909938 464910471 533 True 758.0 758 92.336 1 533 1 chr5D.!!$R1 532
4 TraesCS2D01G587200 chr4D 501676007 501676534 527 True 584.0 584 86.778 3 533 1 chr4D.!!$R3 530
5 TraesCS2D01G587200 chr1D 221909820 221910344 524 False 566.0 566 86.194 3 533 1 chr1D.!!$F1 530
6 TraesCS2D01G587200 chr6D 27469281 27469813 532 False 534.0 534 84.871 1 538 1 chr6D.!!$F1 537
7 TraesCS2D01G587200 chr6A 106836956 106837480 524 False 497.0 497 83.925 1 530 1 chr6A.!!$F2 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
543 559 0.101399 TGCTCTTAGCTGCGCTCTAC 59.899 55.0 9.73 0.0 42.97 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2297 2488 0.106619 CTGCTAGTACTCCCTCCGGT 60.107 60.0 0.0 0.0 0.0 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 1.080501 CGACGAGAAGCTCAAGGCA 60.081 57.895 0.00 0.00 44.79 4.75
50 51 1.731720 GACGAGAAGCTCAAGGCATT 58.268 50.000 0.00 0.00 44.79 3.56
163 164 2.571757 GACGATGCCTCCACGACA 59.428 61.111 0.00 0.00 0.00 4.35
302 313 1.395670 GCACGCGTCCTTTCTTTTTC 58.604 50.000 9.86 0.00 0.00 2.29
339 350 0.817654 ATCTGATCGCCGAACTGTGA 59.182 50.000 0.00 0.00 0.00 3.58
350 362 0.388649 GAACTGTGACCGCAGATCGT 60.389 55.000 16.45 0.25 39.62 3.73
361 373 0.456824 GCAGATCGTCAGACTTGCGA 60.457 55.000 0.00 1.29 37.30 5.10
382 395 2.289195 ACGTCTTTTGTGAGCGGGAATA 60.289 45.455 0.00 0.00 0.00 1.75
384 397 3.374058 CGTCTTTTGTGAGCGGGAATAAT 59.626 43.478 0.00 0.00 0.00 1.28
446 461 1.489481 CATGACTGGGAGCTAGGTCA 58.511 55.000 22.66 11.40 41.84 4.02
469 484 4.241555 AGGGGCCAATCTAGCGCG 62.242 66.667 4.39 0.00 43.60 6.86
534 550 0.758123 GGCTGGAGATGCTCTTAGCT 59.242 55.000 17.10 0.00 42.97 3.32
535 551 1.540797 GGCTGGAGATGCTCTTAGCTG 60.541 57.143 17.10 0.00 42.97 4.24
536 552 1.868469 CTGGAGATGCTCTTAGCTGC 58.132 55.000 0.00 0.00 42.97 5.25
537 553 0.103755 TGGAGATGCTCTTAGCTGCG 59.896 55.000 0.00 0.00 42.97 5.18
538 554 1.220817 GGAGATGCTCTTAGCTGCGC 61.221 60.000 0.00 0.00 42.97 6.09
539 555 0.249405 GAGATGCTCTTAGCTGCGCT 60.249 55.000 9.73 8.09 42.97 5.92
540 556 0.249405 AGATGCTCTTAGCTGCGCTC 60.249 55.000 9.73 0.00 42.97 5.03
541 557 0.249405 GATGCTCTTAGCTGCGCTCT 60.249 55.000 9.73 8.56 42.97 4.09
542 558 1.000827 GATGCTCTTAGCTGCGCTCTA 60.001 52.381 9.73 7.44 42.97 2.43
543 559 0.101399 TGCTCTTAGCTGCGCTCTAC 59.899 55.000 9.73 0.00 42.97 2.59
544 560 0.932585 GCTCTTAGCTGCGCTCTACG 60.933 60.000 9.73 8.09 40.44 3.51
545 561 0.317436 CTCTTAGCTGCGCTCTACGG 60.317 60.000 9.73 6.11 43.93 4.02
546 562 0.746923 TCTTAGCTGCGCTCTACGGA 60.747 55.000 9.73 8.18 43.93 4.69
564 580 2.262915 GCAGCTAGCGTCCACACT 59.737 61.111 9.55 0.00 0.00 3.55
565 581 2.097038 GCAGCTAGCGTCCACACTG 61.097 63.158 9.55 0.12 0.00 3.66
566 582 1.290324 CAGCTAGCGTCCACACTGT 59.710 57.895 9.55 0.00 0.00 3.55
567 583 0.526211 CAGCTAGCGTCCACACTGTA 59.474 55.000 9.55 0.00 0.00 2.74
568 584 0.526662 AGCTAGCGTCCACACTGTAC 59.473 55.000 9.55 0.00 0.00 2.90
569 585 0.242825 GCTAGCGTCCACACTGTACA 59.757 55.000 0.00 0.00 0.00 2.90
570 586 1.978542 CTAGCGTCCACACTGTACAC 58.021 55.000 0.00 0.00 0.00 2.90
571 587 1.268625 CTAGCGTCCACACTGTACACA 59.731 52.381 0.00 0.00 0.00 3.72
572 588 0.679505 AGCGTCCACACTGTACACAT 59.320 50.000 0.00 0.00 0.00 3.21
573 589 0.790207 GCGTCCACACTGTACACATG 59.210 55.000 0.00 0.00 0.00 3.21
574 590 1.428448 CGTCCACACTGTACACATGG 58.572 55.000 8.43 8.43 0.00 3.66
575 591 1.000394 CGTCCACACTGTACACATGGA 60.000 52.381 12.08 12.08 37.11 3.41
576 592 2.353704 CGTCCACACTGTACACATGGAT 60.354 50.000 17.00 0.00 41.38 3.41
577 593 3.002791 GTCCACACTGTACACATGGATG 58.997 50.000 17.00 4.44 41.38 3.51
578 594 2.637382 TCCACACTGTACACATGGATGT 59.363 45.455 12.08 0.00 42.84 3.06
579 595 3.835395 TCCACACTGTACACATGGATGTA 59.165 43.478 12.08 0.00 39.39 2.29
580 596 4.469586 TCCACACTGTACACATGGATGTAT 59.530 41.667 12.08 0.00 39.39 2.29
581 597 5.045942 TCCACACTGTACACATGGATGTATT 60.046 40.000 12.08 0.00 39.39 1.89
582 598 5.294306 CCACACTGTACACATGGATGTATTC 59.706 44.000 8.92 0.00 39.39 1.75
583 599 6.108687 CACACTGTACACATGGATGTATTCT 58.891 40.000 0.00 0.00 39.39 2.40
584 600 6.256539 CACACTGTACACATGGATGTATTCTC 59.743 42.308 0.00 0.00 39.39 2.87
585 601 6.070824 ACACTGTACACATGGATGTATTCTCA 60.071 38.462 0.00 0.00 39.39 3.27
586 602 6.478016 CACTGTACACATGGATGTATTCTCAG 59.522 42.308 0.00 4.35 39.39 3.35
587 603 6.155221 ACTGTACACATGGATGTATTCTCAGT 59.845 38.462 9.71 9.71 39.39 3.41
588 604 6.340522 TGTACACATGGATGTATTCTCAGTG 58.659 40.000 0.00 0.00 39.39 3.66
589 605 4.194640 ACACATGGATGTATTCTCAGTGC 58.805 43.478 0.00 0.00 39.39 4.40
590 606 4.080695 ACACATGGATGTATTCTCAGTGCT 60.081 41.667 0.00 0.00 39.39 4.40
591 607 4.510711 CACATGGATGTATTCTCAGTGCTC 59.489 45.833 0.00 0.00 39.39 4.26
592 608 4.162888 ACATGGATGTATTCTCAGTGCTCA 59.837 41.667 0.00 0.00 39.68 4.26
593 609 4.128925 TGGATGTATTCTCAGTGCTCAC 57.871 45.455 0.00 0.00 0.00 3.51
594 610 3.515104 TGGATGTATTCTCAGTGCTCACA 59.485 43.478 2.63 0.00 0.00 3.58
595 611 4.162888 TGGATGTATTCTCAGTGCTCACAT 59.837 41.667 2.63 0.00 0.00 3.21
596 612 5.121811 GGATGTATTCTCAGTGCTCACATT 58.878 41.667 2.63 0.00 0.00 2.71
597 613 5.236047 GGATGTATTCTCAGTGCTCACATTC 59.764 44.000 2.63 0.00 0.00 2.67
598 614 5.151297 TGTATTCTCAGTGCTCACATTCA 57.849 39.130 2.63 0.00 0.00 2.57
599 615 5.173664 TGTATTCTCAGTGCTCACATTCAG 58.826 41.667 2.63 0.00 0.00 3.02
600 616 4.548451 ATTCTCAGTGCTCACATTCAGA 57.452 40.909 2.63 0.00 0.00 3.27
601 617 3.589495 TCTCAGTGCTCACATTCAGAG 57.411 47.619 2.63 0.00 36.21 3.35
602 618 3.160269 TCTCAGTGCTCACATTCAGAGA 58.840 45.455 2.63 4.50 35.09 3.10
603 619 3.056962 TCTCAGTGCTCACATTCAGAGAC 60.057 47.826 2.63 0.00 35.09 3.36
604 620 2.896044 TCAGTGCTCACATTCAGAGACT 59.104 45.455 2.63 0.00 35.09 3.24
605 621 3.056962 TCAGTGCTCACATTCAGAGACTC 60.057 47.826 2.63 0.00 35.09 3.36
606 622 2.896044 AGTGCTCACATTCAGAGACTCA 59.104 45.455 5.02 0.00 35.09 3.41
607 623 2.992543 GTGCTCACATTCAGAGACTCAC 59.007 50.000 5.02 0.00 35.09 3.51
630 646 2.515057 TGGTTCACCACGTGCCAC 60.515 61.111 10.91 3.09 42.01 5.01
631 647 3.284449 GGTTCACCACGTGCCACC 61.284 66.667 10.91 8.87 32.38 4.61
632 648 3.284449 GTTCACCACGTGCCACCC 61.284 66.667 10.91 0.00 32.98 4.61
633 649 4.920112 TTCACCACGTGCCACCCG 62.920 66.667 10.91 0.00 32.98 5.28
649 665 2.078665 CCGTCCCATCCCATCCCTT 61.079 63.158 0.00 0.00 0.00 3.95
651 667 1.846973 GTCCCATCCCATCCCTTCC 59.153 63.158 0.00 0.00 0.00 3.46
654 679 1.001140 CCCATCCCATCCCTTCCCTT 61.001 60.000 0.00 0.00 0.00 3.95
661 686 0.553333 CATCCCTTCCCTTCCCTTCC 59.447 60.000 0.00 0.00 0.00 3.46
675 700 2.761208 TCCCTTCCGTGAATCTTCTCTC 59.239 50.000 0.00 0.00 0.00 3.20
684 729 4.496673 CGTGAATCTTCTCTCCTCCGTTAG 60.497 50.000 0.00 0.00 0.00 2.34
721 766 2.266554 CTACTGCACTTGACAGCTAGC 58.733 52.381 6.62 6.62 38.79 3.42
722 767 0.683973 ACTGCACTTGACAGCTAGCT 59.316 50.000 12.68 12.68 38.79 3.32
726 771 3.329386 TGCACTTGACAGCTAGCTAAAG 58.671 45.455 18.86 21.47 0.00 1.85
727 772 3.244215 TGCACTTGACAGCTAGCTAAAGT 60.244 43.478 23.79 23.79 0.00 2.66
728 773 4.021456 TGCACTTGACAGCTAGCTAAAGTA 60.021 41.667 26.63 16.53 0.00 2.24
729 774 4.929808 GCACTTGACAGCTAGCTAAAGTAA 59.070 41.667 26.63 11.53 0.00 2.24
730 775 5.408604 GCACTTGACAGCTAGCTAAAGTAAA 59.591 40.000 26.63 16.77 0.00 2.01
732 777 7.519970 GCACTTGACAGCTAGCTAAAGTAAAAA 60.520 37.037 26.63 13.52 0.00 1.94
764 810 4.191544 CTCACCACGGTCATTATGATTGT 58.808 43.478 0.00 0.00 0.00 2.71
765 811 4.188462 TCACCACGGTCATTATGATTGTC 58.812 43.478 0.00 0.00 0.00 3.18
781 827 3.695606 TCCACGCTCCAGTCCAGC 61.696 66.667 0.00 0.00 0.00 4.85
803 849 2.957006 GCAAGAAGCATCCAATGATCCT 59.043 45.455 0.00 0.00 44.79 3.24
814 872 0.179009 AATGATCCTCCCATGGCGTG 60.179 55.000 6.09 0.00 0.00 5.34
827 885 6.936279 TCCCATGGCGTGAATAAAATAAAAA 58.064 32.000 6.09 0.00 0.00 1.94
834 892 7.600375 TGGCGTGAATAAAATAAAAAGCATCAA 59.400 29.630 0.00 0.00 0.00 2.57
848 906 6.588719 AAAGCATCAACTTTATTACCTGCA 57.411 33.333 0.00 0.00 38.09 4.41
849 907 5.567138 AGCATCAACTTTATTACCTGCAC 57.433 39.130 0.00 0.00 0.00 4.57
851 909 5.355350 AGCATCAACTTTATTACCTGCACTC 59.645 40.000 0.00 0.00 0.00 3.51
852 910 5.355350 GCATCAACTTTATTACCTGCACTCT 59.645 40.000 0.00 0.00 0.00 3.24
853 911 6.676456 GCATCAACTTTATTACCTGCACTCTG 60.676 42.308 0.00 0.00 0.00 3.35
900 968 2.487934 CTTCACTTCACCACTCCACTG 58.512 52.381 0.00 0.00 0.00 3.66
901 969 1.496060 TCACTTCACCACTCCACTGT 58.504 50.000 0.00 0.00 0.00 3.55
917 985 3.640407 GTCCACTGCCCAGCTCCA 61.640 66.667 0.00 0.00 0.00 3.86
919 987 2.233566 TCCACTGCCCAGCTCCAAT 61.234 57.895 0.00 0.00 0.00 3.16
920 988 1.751927 CCACTGCCCAGCTCCAATC 60.752 63.158 0.00 0.00 0.00 2.67
921 989 1.302285 CACTGCCCAGCTCCAATCT 59.698 57.895 0.00 0.00 0.00 2.40
963 1049 4.686396 GCAAGTAAAATACTCCTCCCTCCC 60.686 50.000 0.00 0.00 38.26 4.30
964 1050 3.306613 AGTAAAATACTCCTCCCTCCCG 58.693 50.000 0.00 0.00 32.47 5.14
965 1051 2.563039 AAAATACTCCTCCCTCCCGA 57.437 50.000 0.00 0.00 0.00 5.14
971 1061 2.760385 CCTCCCTCCCGACTCCAC 60.760 72.222 0.00 0.00 0.00 4.02
1077 1184 1.968050 AACCTTCATCCTACGCGGGG 61.968 60.000 12.47 12.86 0.00 5.73
1078 1185 2.421739 CTTCATCCTACGCGGGGG 59.578 66.667 12.47 12.45 0.00 5.40
1079 1186 3.809374 CTTCATCCTACGCGGGGGC 62.809 68.421 12.47 0.00 0.00 5.80
1236 1346 0.898320 TCGCCTTCTTCCTCTTCCTG 59.102 55.000 0.00 0.00 0.00 3.86
1414 1557 8.506140 TTCTTTCTTTTGCTACAATCGATTTG 57.494 30.769 8.21 6.95 41.36 2.32
1450 1597 7.826744 TGGTTGAGTAACAATGAACTGCATATA 59.173 33.333 0.00 0.00 40.76 0.86
1451 1598 8.840321 GGTTGAGTAACAATGAACTGCATATAT 58.160 33.333 0.00 0.00 40.76 0.86
1490 1641 2.591429 CGGTGCCACAAGCTGACA 60.591 61.111 0.00 0.00 44.23 3.58
1701 1852 0.399233 CTGCTTCTAGCCCTACCCCT 60.399 60.000 0.00 0.00 41.51 4.79
1702 1853 0.938945 TGCTTCTAGCCCTACCCCTA 59.061 55.000 0.00 0.00 41.51 3.53
1703 1854 1.340088 GCTTCTAGCCCTACCCCTAC 58.660 60.000 0.00 0.00 34.48 3.18
1704 1855 2.012565 CTTCTAGCCCTACCCCTACC 57.987 60.000 0.00 0.00 0.00 3.18
1705 1856 0.564671 TTCTAGCCCTACCCCTACCC 59.435 60.000 0.00 0.00 0.00 3.69
1706 1857 1.157989 CTAGCCCTACCCCTACCCC 59.842 68.421 0.00 0.00 0.00 4.95
1707 1858 1.311187 TAGCCCTACCCCTACCCCT 60.311 63.158 0.00 0.00 0.00 4.79
1708 1859 0.026630 TAGCCCTACCCCTACCCCTA 60.027 60.000 0.00 0.00 0.00 3.53
1709 1860 1.152161 GCCCTACCCCTACCCCTAC 60.152 68.421 0.00 0.00 0.00 3.18
1710 1861 1.550842 CCCTACCCCTACCCCTACC 59.449 68.421 0.00 0.00 0.00 3.18
1711 1862 1.550842 CCTACCCCTACCCCTACCC 59.449 68.421 0.00 0.00 0.00 3.69
1712 1863 1.550842 CTACCCCTACCCCTACCCC 59.449 68.421 0.00 0.00 0.00 4.95
1713 1864 1.008917 CTACCCCTACCCCTACCCCT 61.009 65.000 0.00 0.00 0.00 4.79
1714 1865 0.357535 TACCCCTACCCCTACCCCTA 59.642 60.000 0.00 0.00 0.00 3.53
1715 1866 1.008917 ACCCCTACCCCTACCCCTAG 61.009 65.000 0.00 0.00 0.00 3.02
1716 1867 1.157989 CCCTACCCCTACCCCTAGC 59.842 68.421 0.00 0.00 0.00 3.42
1717 1868 1.157989 CCTACCCCTACCCCTAGCC 59.842 68.421 0.00 0.00 0.00 3.93
1734 1885 1.188871 GCCTACCCCTAGCCTAGCTG 61.189 65.000 0.00 0.00 40.10 4.24
1750 1901 1.355720 AGCTGCCACCATTACCTTCTT 59.644 47.619 0.00 0.00 0.00 2.52
1798 1962 9.126151 TCTTCTGTTCATCAGGATTACTAGTAG 57.874 37.037 2.23 0.00 43.76 2.57
1799 1963 9.126151 CTTCTGTTCATCAGGATTACTAGTAGA 57.874 37.037 3.59 0.00 43.76 2.59
1800 1964 9.475620 TTCTGTTCATCAGGATTACTAGTAGAA 57.524 33.333 3.59 0.00 43.76 2.10
1801 1965 9.647918 TCTGTTCATCAGGATTACTAGTAGAAT 57.352 33.333 3.59 0.00 43.76 2.40
1802 1966 9.906660 CTGTTCATCAGGATTACTAGTAGAATC 57.093 37.037 3.59 9.13 40.23 2.52
1803 1967 8.568794 TGTTCATCAGGATTACTAGTAGAATCG 58.431 37.037 3.59 1.47 33.63 3.34
1804 1968 8.784994 GTTCATCAGGATTACTAGTAGAATCGA 58.215 37.037 3.59 5.73 33.63 3.59
1805 1969 8.919777 TCATCAGGATTACTAGTAGAATCGAA 57.080 34.615 3.59 2.17 33.63 3.71
1806 1970 9.521841 TCATCAGGATTACTAGTAGAATCGAAT 57.478 33.333 3.59 0.00 33.63 3.34
1807 1971 9.781834 CATCAGGATTACTAGTAGAATCGAATC 57.218 37.037 3.59 7.67 33.63 2.52
1868 2032 1.288127 GCAAGCAGCACCCAGAAAG 59.712 57.895 0.00 0.00 44.79 2.62
1916 2080 3.244700 CCAAGAGTGAGTGGGATCTGTTT 60.245 47.826 0.00 0.00 0.00 2.83
1917 2081 3.692257 AGAGTGAGTGGGATCTGTTTG 57.308 47.619 0.00 0.00 0.00 2.93
1918 2082 2.079925 GAGTGAGTGGGATCTGTTTGC 58.920 52.381 0.00 0.00 0.00 3.68
1919 2083 1.701847 AGTGAGTGGGATCTGTTTGCT 59.298 47.619 0.00 0.00 0.00 3.91
1920 2084 2.107204 AGTGAGTGGGATCTGTTTGCTT 59.893 45.455 0.00 0.00 0.00 3.91
1921 2085 2.227388 GTGAGTGGGATCTGTTTGCTTG 59.773 50.000 0.00 0.00 0.00 4.01
1922 2086 1.200948 GAGTGGGATCTGTTTGCTTGC 59.799 52.381 0.00 0.00 0.00 4.01
1923 2087 0.244721 GTGGGATCTGTTTGCTTGCC 59.755 55.000 0.00 0.00 0.00 4.52
2058 2249 1.660104 TGTCAATCACATCGCATCACG 59.340 47.619 0.00 0.00 45.62 4.35
2059 2250 1.660607 GTCAATCACATCGCATCACGT 59.339 47.619 0.00 0.00 44.19 4.49
2060 2251 1.926510 TCAATCACATCGCATCACGTC 59.073 47.619 0.00 0.00 44.19 4.34
2061 2252 1.004610 CAATCACATCGCATCACGTCC 60.005 52.381 0.00 0.00 44.19 4.79
2062 2253 0.461548 ATCACATCGCATCACGTCCT 59.538 50.000 0.00 0.00 44.19 3.85
2063 2254 0.246360 TCACATCGCATCACGTCCTT 59.754 50.000 0.00 0.00 44.19 3.36
2064 2255 1.078709 CACATCGCATCACGTCCTTT 58.921 50.000 0.00 0.00 44.19 3.11
2065 2256 1.464608 CACATCGCATCACGTCCTTTT 59.535 47.619 0.00 0.00 44.19 2.27
2068 2259 3.124636 ACATCGCATCACGTCCTTTTTAC 59.875 43.478 0.00 0.00 44.19 2.01
2069 2260 3.034721 TCGCATCACGTCCTTTTTACT 57.965 42.857 0.00 0.00 44.19 2.24
2070 2261 2.991190 TCGCATCACGTCCTTTTTACTC 59.009 45.455 0.00 0.00 44.19 2.59
2071 2262 2.993899 CGCATCACGTCCTTTTTACTCT 59.006 45.455 0.00 0.00 36.87 3.24
2072 2263 3.181530 CGCATCACGTCCTTTTTACTCTG 60.182 47.826 0.00 0.00 36.87 3.35
2073 2264 3.424962 GCATCACGTCCTTTTTACTCTGC 60.425 47.826 0.00 0.00 0.00 4.26
2074 2265 3.462483 TCACGTCCTTTTTACTCTGCA 57.538 42.857 0.00 0.00 0.00 4.41
2075 2266 3.128349 TCACGTCCTTTTTACTCTGCAC 58.872 45.455 0.00 0.00 0.00 4.57
2076 2267 2.869801 CACGTCCTTTTTACTCTGCACA 59.130 45.455 0.00 0.00 0.00 4.57
2077 2268 3.498397 CACGTCCTTTTTACTCTGCACAT 59.502 43.478 0.00 0.00 0.00 3.21
2078 2269 4.024048 CACGTCCTTTTTACTCTGCACATT 60.024 41.667 0.00 0.00 0.00 2.71
2079 2270 4.024048 ACGTCCTTTTTACTCTGCACATTG 60.024 41.667 0.00 0.00 0.00 2.82
2080 2271 4.613622 CGTCCTTTTTACTCTGCACATTGG 60.614 45.833 0.00 0.00 0.00 3.16
2081 2272 4.518970 GTCCTTTTTACTCTGCACATTGGA 59.481 41.667 0.00 0.00 0.00 3.53
2082 2273 5.183904 GTCCTTTTTACTCTGCACATTGGAT 59.816 40.000 0.00 0.00 0.00 3.41
2083 2274 5.774690 TCCTTTTTACTCTGCACATTGGATT 59.225 36.000 0.00 0.00 0.00 3.01
2084 2275 6.267471 TCCTTTTTACTCTGCACATTGGATTT 59.733 34.615 0.00 0.00 0.00 2.17
2085 2276 7.450014 TCCTTTTTACTCTGCACATTGGATTTA 59.550 33.333 0.00 0.00 0.00 1.40
2086 2277 7.542130 CCTTTTTACTCTGCACATTGGATTTAC 59.458 37.037 0.00 0.00 0.00 2.01
2087 2278 6.509418 TTTACTCTGCACATTGGATTTACC 57.491 37.500 0.00 0.00 39.54 2.85
2088 2279 3.009723 ACTCTGCACATTGGATTTACCG 58.990 45.455 0.00 0.00 42.61 4.02
2089 2280 3.270027 CTCTGCACATTGGATTTACCGA 58.730 45.455 0.00 0.00 42.61 4.69
2090 2281 3.680490 TCTGCACATTGGATTTACCGAA 58.320 40.909 0.00 0.00 42.61 4.30
2091 2282 4.075682 TCTGCACATTGGATTTACCGAAA 58.924 39.130 0.00 0.00 42.61 3.46
2092 2283 4.155826 TCTGCACATTGGATTTACCGAAAG 59.844 41.667 0.00 0.00 42.61 2.62
2093 2284 3.823873 TGCACATTGGATTTACCGAAAGT 59.176 39.130 0.00 0.00 42.61 2.66
2094 2285 4.083003 TGCACATTGGATTTACCGAAAGTC 60.083 41.667 0.00 0.00 42.61 3.01
2095 2286 4.083003 GCACATTGGATTTACCGAAAGTCA 60.083 41.667 0.00 0.00 42.61 3.41
2096 2287 5.563867 GCACATTGGATTTACCGAAAGTCAA 60.564 40.000 0.00 0.00 42.61 3.18
2097 2288 6.442952 CACATTGGATTTACCGAAAGTCAAA 58.557 36.000 0.00 0.00 42.61 2.69
2098 2289 6.362283 CACATTGGATTTACCGAAAGTCAAAC 59.638 38.462 0.00 0.00 42.61 2.93
2099 2290 6.264518 ACATTGGATTTACCGAAAGTCAAACT 59.735 34.615 0.00 0.00 42.61 2.66
2100 2291 6.702716 TTGGATTTACCGAAAGTCAAACTT 57.297 33.333 0.00 0.00 40.04 2.66
2101 2292 6.702716 TGGATTTACCGAAAGTCAAACTTT 57.297 33.333 4.82 4.82 42.68 2.66
2102 2293 6.500041 TGGATTTACCGAAAGTCAAACTTTG 58.500 36.000 9.65 0.00 43.15 2.77
2103 2294 6.953310 TGGATTTACCGAAAGTCAAACTTTGC 60.953 38.462 9.65 2.06 43.15 3.68
2104 2295 9.027205 TGGATTTACCGAAAGTCAAACTTTGCT 62.027 37.037 9.65 0.00 43.15 3.91
2206 2397 9.857656 AGATGAATCTAATGATATTGGTGTTGT 57.142 29.630 0.00 0.00 34.85 3.32
2213 2404 9.898152 TCTAATGATATTGGTGTTGTTATGTGA 57.102 29.630 0.00 0.00 0.00 3.58
2218 2409 9.636879 TGATATTGGTGTTGTTATGTGAAAATG 57.363 29.630 0.00 0.00 0.00 2.32
2219 2410 9.638239 GATATTGGTGTTGTTATGTGAAAATGT 57.362 29.630 0.00 0.00 0.00 2.71
2220 2411 7.945033 ATTGGTGTTGTTATGTGAAAATGTC 57.055 32.000 0.00 0.00 0.00 3.06
2221 2412 6.707440 TGGTGTTGTTATGTGAAAATGTCT 57.293 33.333 0.00 0.00 0.00 3.41
2222 2413 7.809546 TGGTGTTGTTATGTGAAAATGTCTA 57.190 32.000 0.00 0.00 0.00 2.59
2223 2414 8.402798 TGGTGTTGTTATGTGAAAATGTCTAT 57.597 30.769 0.00 0.00 0.00 1.98
2224 2415 9.508642 TGGTGTTGTTATGTGAAAATGTCTATA 57.491 29.630 0.00 0.00 0.00 1.31
2260 2451 4.756084 CTTGGTCAAAGTTGGATGAGAC 57.244 45.455 0.00 0.00 0.00 3.36
2261 2452 4.392940 CTTGGTCAAAGTTGGATGAGACT 58.607 43.478 0.00 0.00 0.00 3.24
2262 2453 3.743521 TGGTCAAAGTTGGATGAGACTG 58.256 45.455 0.00 0.00 0.00 3.51
2263 2454 3.390967 TGGTCAAAGTTGGATGAGACTGA 59.609 43.478 0.00 0.00 0.00 3.41
2264 2455 3.748568 GGTCAAAGTTGGATGAGACTGAC 59.251 47.826 0.00 0.00 0.00 3.51
2265 2456 4.503991 GGTCAAAGTTGGATGAGACTGACT 60.504 45.833 0.00 0.00 0.00 3.41
2266 2457 5.059833 GTCAAAGTTGGATGAGACTGACTT 58.940 41.667 0.00 0.00 0.00 3.01
2267 2458 5.178438 GTCAAAGTTGGATGAGACTGACTTC 59.822 44.000 0.00 0.00 0.00 3.01
2268 2459 4.963318 AAGTTGGATGAGACTGACTTCA 57.037 40.909 0.00 0.00 0.00 3.02
2269 2460 4.963318 AGTTGGATGAGACTGACTTCAA 57.037 40.909 0.00 0.00 0.00 2.69
2270 2461 5.296151 AGTTGGATGAGACTGACTTCAAA 57.704 39.130 0.00 0.00 0.00 2.69
2271 2462 5.059833 AGTTGGATGAGACTGACTTCAAAC 58.940 41.667 0.00 0.00 0.00 2.93
2272 2463 4.687901 TGGATGAGACTGACTTCAAACA 57.312 40.909 0.00 0.00 0.00 2.83
2273 2464 5.034852 TGGATGAGACTGACTTCAAACAA 57.965 39.130 0.00 0.00 0.00 2.83
2274 2465 5.436175 TGGATGAGACTGACTTCAAACAAA 58.564 37.500 0.00 0.00 0.00 2.83
2275 2466 5.296780 TGGATGAGACTGACTTCAAACAAAC 59.703 40.000 0.00 0.00 0.00 2.93
2276 2467 5.278022 GGATGAGACTGACTTCAAACAAACC 60.278 44.000 0.00 0.00 0.00 3.27
2277 2468 4.843728 TGAGACTGACTTCAAACAAACCT 58.156 39.130 0.00 0.00 0.00 3.50
2278 2469 5.984725 TGAGACTGACTTCAAACAAACCTA 58.015 37.500 0.00 0.00 0.00 3.08
2279 2470 6.411376 TGAGACTGACTTCAAACAAACCTAA 58.589 36.000 0.00 0.00 0.00 2.69
2280 2471 7.054124 TGAGACTGACTTCAAACAAACCTAAT 58.946 34.615 0.00 0.00 0.00 1.73
2281 2472 8.208224 TGAGACTGACTTCAAACAAACCTAATA 58.792 33.333 0.00 0.00 0.00 0.98
2282 2473 9.220767 GAGACTGACTTCAAACAAACCTAATAT 57.779 33.333 0.00 0.00 0.00 1.28
2283 2474 9.220767 AGACTGACTTCAAACAAACCTAATATC 57.779 33.333 0.00 0.00 0.00 1.63
2284 2475 8.336801 ACTGACTTCAAACAAACCTAATATCC 57.663 34.615 0.00 0.00 0.00 2.59
2285 2476 7.942341 ACTGACTTCAAACAAACCTAATATCCA 59.058 33.333 0.00 0.00 0.00 3.41
2286 2477 8.335532 TGACTTCAAACAAACCTAATATCCAG 57.664 34.615 0.00 0.00 0.00 3.86
2287 2478 8.160765 TGACTTCAAACAAACCTAATATCCAGA 58.839 33.333 0.00 0.00 0.00 3.86
2288 2479 8.567285 ACTTCAAACAAACCTAATATCCAGAG 57.433 34.615 0.00 0.00 0.00 3.35
2289 2480 8.164070 ACTTCAAACAAACCTAATATCCAGAGT 58.836 33.333 0.00 0.00 0.00 3.24
2290 2481 9.667107 CTTCAAACAAACCTAATATCCAGAGTA 57.333 33.333 0.00 0.00 0.00 2.59
2299 2490 9.628500 AACCTAATATCCAGAGTAAAAATGACC 57.372 33.333 0.00 0.00 0.00 4.02
2300 2491 7.931948 ACCTAATATCCAGAGTAAAAATGACCG 59.068 37.037 0.00 0.00 0.00 4.79
2301 2492 7.387948 CCTAATATCCAGAGTAAAAATGACCGG 59.612 40.741 0.00 0.00 0.00 5.28
2302 2493 4.837093 ATCCAGAGTAAAAATGACCGGA 57.163 40.909 9.46 0.00 0.00 5.14
2303 2494 4.202245 TCCAGAGTAAAAATGACCGGAG 57.798 45.455 9.46 0.00 0.00 4.63
2381 2576 8.151141 TGTACACTACACTAGGATAAGAATCG 57.849 38.462 0.00 0.00 32.89 3.34
2482 2682 6.033966 CCTTTTATTTCCCCTTTCGAAATCG 58.966 40.000 11.70 4.65 39.86 3.34
2524 2729 6.690530 ACCATCATTTGTTGTTACATCTTGG 58.309 36.000 0.00 0.00 33.44 3.61
2527 2732 7.329226 CCATCATTTGTTGTTACATCTTGGAAC 59.671 37.037 0.00 0.00 41.53 3.62
2544 2750 8.882415 TCTTGGAACGGTAGTAAATATGATTC 57.118 34.615 0.00 0.00 0.00 2.52
2634 2840 8.705048 ATCTCTAGTGAAAGAAAACGAATACC 57.295 34.615 0.00 0.00 0.00 2.73
2660 2866 4.402155 AGAAAGGAACAAACAACAGATGCA 59.598 37.500 0.00 0.00 0.00 3.96
2661 2867 4.942761 AAGGAACAAACAACAGATGCAT 57.057 36.364 0.00 0.00 0.00 3.96
2662 2868 4.247267 AGGAACAAACAACAGATGCATG 57.753 40.909 2.46 0.00 0.00 4.06
2663 2869 2.733026 GGAACAAACAACAGATGCATGC 59.267 45.455 11.82 11.82 0.00 4.06
2664 2870 3.382855 GAACAAACAACAGATGCATGCA 58.617 40.909 25.04 25.04 0.00 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 4.124910 CGCTCCGCCATGTACAAT 57.875 55.556 0.00 0.00 0.00 2.71
148 149 2.509336 GGTGTCGTGGAGGCATCG 60.509 66.667 0.00 0.00 36.54 3.84
163 164 4.341783 GCCTCTGTGCTGCTGGGT 62.342 66.667 0.00 0.00 0.00 4.51
191 192 3.889134 CTGCTTCTGTGCTGGGCGA 62.889 63.158 0.00 0.00 0.00 5.54
302 313 5.516996 TCAGATAAATAGTTCGGCGTACAG 58.483 41.667 18.71 0.00 0.00 2.74
339 350 0.109086 CAAGTCTGACGATCTGCGGT 60.109 55.000 1.52 0.00 46.49 5.68
361 373 0.179067 TTCCCGCTCACAAAAGACGT 60.179 50.000 0.00 0.00 0.00 4.34
382 395 3.425193 GTCGCGCAATTTCAAACTTGATT 59.575 39.130 8.75 0.00 37.00 2.57
384 397 2.032799 AGTCGCGCAATTTCAAACTTGA 59.967 40.909 8.75 0.00 34.92 3.02
538 554 1.281353 CGCTAGCTGCTCCGTAGAG 59.719 63.158 13.93 0.00 43.57 2.43
539 555 1.437772 GACGCTAGCTGCTCCGTAGA 61.438 60.000 22.44 0.00 40.11 2.59
540 556 1.009449 GACGCTAGCTGCTCCGTAG 60.009 63.158 22.44 9.94 40.11 3.51
541 557 2.478890 GGACGCTAGCTGCTCCGTA 61.479 63.158 22.44 0.00 40.11 4.02
542 558 3.827898 GGACGCTAGCTGCTCCGT 61.828 66.667 22.55 22.55 40.11 4.69
543 559 3.826754 TGGACGCTAGCTGCTCCG 61.827 66.667 13.93 13.16 39.90 4.63
544 560 2.202810 GTGGACGCTAGCTGCTCC 60.203 66.667 13.93 13.67 40.11 4.70
545 561 1.807573 GTGTGGACGCTAGCTGCTC 60.808 63.158 13.93 6.93 40.11 4.26
546 562 2.262915 GTGTGGACGCTAGCTGCT 59.737 61.111 13.93 7.57 40.11 4.24
547 563 2.097038 CAGTGTGGACGCTAGCTGC 61.097 63.158 13.93 5.97 34.49 5.25
548 564 0.526211 TACAGTGTGGACGCTAGCTG 59.474 55.000 13.93 9.03 34.49 4.24
549 565 0.526662 GTACAGTGTGGACGCTAGCT 59.473 55.000 13.93 0.00 34.49 3.32
550 566 0.242825 TGTACAGTGTGGACGCTAGC 59.757 55.000 5.88 4.06 32.63 3.42
551 567 1.268625 TGTGTACAGTGTGGACGCTAG 59.731 52.381 5.88 0.00 42.08 3.42
552 568 1.320507 TGTGTACAGTGTGGACGCTA 58.679 50.000 5.88 0.00 42.08 4.26
553 569 0.679505 ATGTGTACAGTGTGGACGCT 59.320 50.000 5.88 0.00 42.08 5.07
554 570 0.790207 CATGTGTACAGTGTGGACGC 59.210 55.000 5.88 4.34 41.92 5.19
555 571 1.000394 TCCATGTGTACAGTGTGGACG 60.000 52.381 16.02 0.00 32.63 4.79
556 572 2.831685 TCCATGTGTACAGTGTGGAC 57.168 50.000 16.02 2.75 34.23 4.02
557 573 2.637382 ACATCCATGTGTACAGTGTGGA 59.363 45.455 20.10 20.10 42.62 4.02
558 574 3.057969 ACATCCATGTGTACAGTGTGG 57.942 47.619 5.88 12.65 40.03 4.17
559 575 6.108687 AGAATACATCCATGTGTACAGTGTG 58.891 40.000 5.88 0.00 41.89 3.82
560 576 6.070824 TGAGAATACATCCATGTGTACAGTGT 60.071 38.462 0.00 0.00 41.89 3.55
561 577 6.340522 TGAGAATACATCCATGTGTACAGTG 58.659 40.000 0.00 0.00 41.89 3.66
562 578 6.155221 ACTGAGAATACATCCATGTGTACAGT 59.845 38.462 0.00 9.26 41.89 3.55
563 579 6.478016 CACTGAGAATACATCCATGTGTACAG 59.522 42.308 0.00 8.76 41.89 2.74
564 580 6.340522 CACTGAGAATACATCCATGTGTACA 58.659 40.000 2.26 0.00 41.89 2.90
565 581 5.235186 GCACTGAGAATACATCCATGTGTAC 59.765 44.000 2.26 0.00 41.89 2.90
566 582 5.129320 AGCACTGAGAATACATCCATGTGTA 59.871 40.000 2.26 0.00 41.89 2.90
567 583 4.080695 AGCACTGAGAATACATCCATGTGT 60.081 41.667 2.26 0.00 41.89 3.72
568 584 4.449131 AGCACTGAGAATACATCCATGTG 58.551 43.478 2.26 0.00 41.89 3.21
569 585 4.162888 TGAGCACTGAGAATACATCCATGT 59.837 41.667 0.00 0.00 44.48 3.21
570 586 4.510711 GTGAGCACTGAGAATACATCCATG 59.489 45.833 0.00 0.00 0.00 3.66
571 587 4.162888 TGTGAGCACTGAGAATACATCCAT 59.837 41.667 1.99 0.00 0.00 3.41
572 588 3.515104 TGTGAGCACTGAGAATACATCCA 59.485 43.478 1.99 0.00 0.00 3.41
573 589 4.128925 TGTGAGCACTGAGAATACATCC 57.871 45.455 1.99 0.00 0.00 3.51
574 590 5.814188 TGAATGTGAGCACTGAGAATACATC 59.186 40.000 1.99 0.00 0.00 3.06
575 591 5.737860 TGAATGTGAGCACTGAGAATACAT 58.262 37.500 1.99 0.00 0.00 2.29
576 592 5.047092 TCTGAATGTGAGCACTGAGAATACA 60.047 40.000 1.99 0.00 0.00 2.29
577 593 5.414360 TCTGAATGTGAGCACTGAGAATAC 58.586 41.667 1.99 0.00 0.00 1.89
578 594 5.420104 TCTCTGAATGTGAGCACTGAGAATA 59.580 40.000 1.99 0.00 0.00 1.75
579 595 4.222366 TCTCTGAATGTGAGCACTGAGAAT 59.778 41.667 1.99 0.00 0.00 2.40
580 596 3.575687 TCTCTGAATGTGAGCACTGAGAA 59.424 43.478 1.99 0.00 0.00 2.87
581 597 3.056962 GTCTCTGAATGTGAGCACTGAGA 60.057 47.826 1.99 0.00 0.00 3.27
582 598 3.056678 AGTCTCTGAATGTGAGCACTGAG 60.057 47.826 1.99 0.00 0.00 3.35
583 599 2.896044 AGTCTCTGAATGTGAGCACTGA 59.104 45.455 1.99 0.00 0.00 3.41
584 600 3.252400 GAGTCTCTGAATGTGAGCACTG 58.748 50.000 1.99 0.00 0.00 3.66
585 601 2.896044 TGAGTCTCTGAATGTGAGCACT 59.104 45.455 0.65 0.00 0.00 4.40
586 602 2.992543 GTGAGTCTCTGAATGTGAGCAC 59.007 50.000 0.65 0.00 0.00 4.40
587 603 2.629617 TGTGAGTCTCTGAATGTGAGCA 59.370 45.455 0.65 0.00 0.00 4.26
588 604 3.056962 TCTGTGAGTCTCTGAATGTGAGC 60.057 47.826 0.65 0.00 0.00 4.26
589 605 4.458642 TCTCTGTGAGTCTCTGAATGTGAG 59.541 45.833 0.65 0.61 0.00 3.51
590 606 4.401925 TCTCTGTGAGTCTCTGAATGTGA 58.598 43.478 0.65 0.00 0.00 3.58
591 607 4.780275 TCTCTGTGAGTCTCTGAATGTG 57.220 45.455 0.65 0.00 0.00 3.21
592 608 4.160065 CCATCTCTGTGAGTCTCTGAATGT 59.840 45.833 0.65 2.12 0.00 2.71
593 609 4.160065 ACCATCTCTGTGAGTCTCTGAATG 59.840 45.833 0.65 8.95 0.00 2.67
594 610 4.352009 ACCATCTCTGTGAGTCTCTGAAT 58.648 43.478 0.65 0.00 0.00 2.57
595 611 3.772387 ACCATCTCTGTGAGTCTCTGAA 58.228 45.455 0.65 0.00 0.00 3.02
596 612 3.448093 ACCATCTCTGTGAGTCTCTGA 57.552 47.619 0.65 2.39 0.00 3.27
597 613 3.509184 TGAACCATCTCTGTGAGTCTCTG 59.491 47.826 0.65 0.00 0.00 3.35
598 614 3.509575 GTGAACCATCTCTGTGAGTCTCT 59.490 47.826 0.65 0.00 0.00 3.10
599 615 3.367910 GGTGAACCATCTCTGTGAGTCTC 60.368 52.174 0.00 0.00 35.64 3.36
600 616 2.564947 GGTGAACCATCTCTGTGAGTCT 59.435 50.000 0.00 0.00 35.64 3.24
601 617 2.300152 TGGTGAACCATCTCTGTGAGTC 59.700 50.000 0.00 0.00 42.01 3.36
602 618 2.329267 TGGTGAACCATCTCTGTGAGT 58.671 47.619 0.00 0.00 42.01 3.41
630 646 3.570212 GGGATGGGATGGGACGGG 61.570 72.222 0.00 0.00 0.00 5.28
631 647 2.056906 GAAGGGATGGGATGGGACGG 62.057 65.000 0.00 0.00 0.00 4.79
632 648 1.451936 GAAGGGATGGGATGGGACG 59.548 63.158 0.00 0.00 0.00 4.79
633 649 1.720077 GGGAAGGGATGGGATGGGAC 61.720 65.000 0.00 0.00 0.00 4.46
634 650 1.387347 GGGAAGGGATGGGATGGGA 60.387 63.158 0.00 0.00 0.00 4.37
654 679 2.761208 GAGAGAAGATTCACGGAAGGGA 59.239 50.000 0.00 0.00 45.65 4.20
661 686 1.746220 ACGGAGGAGAGAAGATTCACG 59.254 52.381 0.00 0.00 0.00 4.35
703 748 0.683973 AGCTAGCTGTCAAGTGCAGT 59.316 50.000 18.57 0.00 36.42 4.40
704 749 2.662006 TAGCTAGCTGTCAAGTGCAG 57.338 50.000 27.68 0.00 37.06 4.41
705 750 3.244215 ACTTTAGCTAGCTGTCAAGTGCA 60.244 43.478 27.68 0.01 0.00 4.57
706 751 3.330267 ACTTTAGCTAGCTGTCAAGTGC 58.670 45.455 27.68 0.00 0.00 4.40
707 752 7.421530 TTTTACTTTAGCTAGCTGTCAAGTG 57.578 36.000 30.40 17.36 0.00 3.16
730 775 2.029110 CCGTGGTGAGCATTCCATTTTT 60.029 45.455 0.00 0.00 36.09 1.94
732 777 1.176527 CCGTGGTGAGCATTCCATTT 58.823 50.000 0.00 0.00 36.09 2.32
733 778 0.038166 ACCGTGGTGAGCATTCCATT 59.962 50.000 0.00 0.00 36.09 3.16
735 780 1.003839 GACCGTGGTGAGCATTCCA 60.004 57.895 0.00 0.00 0.00 3.53
736 781 0.392998 ATGACCGTGGTGAGCATTCC 60.393 55.000 0.00 0.00 0.00 3.01
737 782 1.453155 AATGACCGTGGTGAGCATTC 58.547 50.000 0.00 0.00 0.00 2.67
739 784 2.170397 TCATAATGACCGTGGTGAGCAT 59.830 45.455 0.00 0.00 0.00 3.79
740 785 1.552792 TCATAATGACCGTGGTGAGCA 59.447 47.619 0.00 0.00 0.00 4.26
741 786 2.309528 TCATAATGACCGTGGTGAGC 57.690 50.000 0.00 0.00 0.00 4.26
745 790 3.054728 TGGACAATCATAATGACCGTGGT 60.055 43.478 0.00 0.00 35.72 4.16
764 810 3.695606 GCTGGACTGGAGCGTGGA 61.696 66.667 0.00 0.00 0.00 4.02
781 827 2.287427 GGATCATTGGATGCTTCTTGCG 60.287 50.000 0.00 0.00 46.63 4.85
803 849 6.531503 TTTTATTTTATTCACGCCATGGGA 57.468 33.333 15.13 0.00 0.00 4.37
827 885 5.256474 AGTGCAGGTAATAAAGTTGATGCT 58.744 37.500 0.00 0.00 33.68 3.79
834 892 5.012148 AGACACAGAGTGCAGGTAATAAAGT 59.988 40.000 0.00 0.00 36.98 2.66
840 898 2.039418 ACAGACACAGAGTGCAGGTAA 58.961 47.619 0.00 0.00 36.98 2.85
841 899 1.341209 CACAGACACAGAGTGCAGGTA 59.659 52.381 0.00 0.00 36.98 3.08
842 900 0.105593 CACAGACACAGAGTGCAGGT 59.894 55.000 0.00 0.00 36.98 4.00
848 906 0.105593 CAGTGGCACAGACACAGAGT 59.894 55.000 21.41 0.00 45.35 3.24
849 907 1.226686 GCAGTGGCACAGACACAGAG 61.227 60.000 21.41 0.00 45.35 3.35
851 909 1.226686 GAGCAGTGGCACAGACACAG 61.227 60.000 21.41 0.00 45.35 3.66
852 910 1.227645 GAGCAGTGGCACAGACACA 60.228 57.895 21.41 0.00 45.35 3.72
853 911 1.227645 TGAGCAGTGGCACAGACAC 60.228 57.895 21.41 7.64 42.83 3.67
900 968 2.490270 ATTGGAGCTGGGCAGTGGAC 62.490 60.000 0.00 0.00 0.00 4.02
901 969 2.202236 GATTGGAGCTGGGCAGTGGA 62.202 60.000 0.00 0.00 0.00 4.02
963 1049 2.045242 TCGGAGGGAGTGGAGTCG 60.045 66.667 0.00 0.00 0.00 4.18
964 1050 3.927501 CTCGGAGGGAGTGGAGTC 58.072 66.667 0.00 0.00 38.02 3.36
1059 1163 2.432300 CCCCGCGTAGGATGAAGGT 61.432 63.158 4.92 0.00 45.00 3.50
1060 1164 2.421739 CCCCGCGTAGGATGAAGG 59.578 66.667 4.92 0.00 45.00 3.46
1414 1557 4.755411 TGTTACTCAACCAGATCGAATCC 58.245 43.478 0.00 0.00 33.41 3.01
1450 1597 4.159879 GCCGCTGGTACCTACTCATTATAT 59.840 45.833 14.36 0.00 0.00 0.86
1451 1598 3.508793 GCCGCTGGTACCTACTCATTATA 59.491 47.826 14.36 0.00 0.00 0.98
1453 1600 1.684983 GCCGCTGGTACCTACTCATTA 59.315 52.381 14.36 0.00 0.00 1.90
1454 1601 0.464452 GCCGCTGGTACCTACTCATT 59.536 55.000 14.36 0.00 0.00 2.57
1455 1602 1.735376 CGCCGCTGGTACCTACTCAT 61.735 60.000 14.36 0.00 0.00 2.90
1456 1603 2.412323 CGCCGCTGGTACCTACTCA 61.412 63.158 14.36 0.00 0.00 3.41
1457 1604 2.412112 CGCCGCTGGTACCTACTC 59.588 66.667 14.36 0.00 0.00 2.59
1701 1852 1.161603 GTAGGCTAGGGGTAGGGGTA 58.838 60.000 0.00 0.00 0.00 3.69
1702 1853 1.672926 GGTAGGCTAGGGGTAGGGGT 61.673 65.000 0.00 0.00 0.00 4.95
1703 1854 1.157989 GGTAGGCTAGGGGTAGGGG 59.842 68.421 0.00 0.00 0.00 4.79
1704 1855 1.157989 GGGTAGGCTAGGGGTAGGG 59.842 68.421 0.00 0.00 0.00 3.53
1705 1856 1.157989 GGGGTAGGCTAGGGGTAGG 59.842 68.421 0.00 0.00 0.00 3.18
1706 1857 1.358445 CTAGGGGTAGGCTAGGGGTAG 59.642 61.905 0.00 0.00 0.00 3.18
1707 1858 1.464639 CTAGGGGTAGGCTAGGGGTA 58.535 60.000 0.00 0.00 0.00 3.69
1708 1859 2.033591 GCTAGGGGTAGGCTAGGGGT 62.034 65.000 0.00 0.00 0.00 4.95
1709 1860 1.229241 GCTAGGGGTAGGCTAGGGG 60.229 68.421 0.00 0.00 0.00 4.79
1710 1861 1.229241 GGCTAGGGGTAGGCTAGGG 60.229 68.421 0.00 0.00 39.28 3.53
1711 1862 4.543195 GGCTAGGGGTAGGCTAGG 57.457 66.667 0.00 0.00 39.28 3.02
1715 1866 1.156566 AGCTAGGCTAGGGGTAGGC 59.843 63.158 22.40 7.56 36.99 3.93
1716 1867 1.188871 GCAGCTAGGCTAGGGGTAGG 61.189 65.000 22.40 0.00 36.40 3.18
1717 1868 1.188871 GGCAGCTAGGCTAGGGGTAG 61.189 65.000 22.40 0.00 36.40 3.18
1734 1885 2.239907 AGGAGAAGAAGGTAATGGTGGC 59.760 50.000 0.00 0.00 0.00 5.01
1750 1901 1.221635 CAGAGAGGAGGAGGAGGAGA 58.778 60.000 0.00 0.00 0.00 3.71
1907 2071 0.108945 GCAGGCAAGCAAACAGATCC 60.109 55.000 0.00 0.00 0.00 3.36
1921 2085 3.136791 GTTAGCAGGCAGGCAGGC 61.137 66.667 0.00 0.00 44.61 4.85
1922 2086 0.682209 AATGTTAGCAGGCAGGCAGG 60.682 55.000 0.00 0.00 35.83 4.85
1923 2087 0.737219 GAATGTTAGCAGGCAGGCAG 59.263 55.000 0.00 0.00 35.83 4.85
2058 2249 4.518970 TCCAATGTGCAGAGTAAAAAGGAC 59.481 41.667 0.00 0.00 0.00 3.85
2059 2250 4.724399 TCCAATGTGCAGAGTAAAAAGGA 58.276 39.130 0.00 0.00 0.00 3.36
2060 2251 5.649782 ATCCAATGTGCAGAGTAAAAAGG 57.350 39.130 0.00 0.00 0.00 3.11
2061 2252 7.542130 GGTAAATCCAATGTGCAGAGTAAAAAG 59.458 37.037 0.00 0.00 35.97 2.27
2062 2253 7.375053 GGTAAATCCAATGTGCAGAGTAAAAA 58.625 34.615 0.00 0.00 35.97 1.94
2063 2254 6.348950 CGGTAAATCCAATGTGCAGAGTAAAA 60.349 38.462 0.00 0.00 35.57 1.52
2064 2255 5.123186 CGGTAAATCCAATGTGCAGAGTAAA 59.877 40.000 0.00 0.00 35.57 2.01
2065 2256 4.634004 CGGTAAATCCAATGTGCAGAGTAA 59.366 41.667 0.00 0.00 35.57 2.24
2068 2259 3.270027 TCGGTAAATCCAATGTGCAGAG 58.730 45.455 0.00 0.00 35.57 3.35
2069 2260 3.342377 TCGGTAAATCCAATGTGCAGA 57.658 42.857 0.00 0.00 35.57 4.26
2070 2261 4.082787 ACTTTCGGTAAATCCAATGTGCAG 60.083 41.667 0.00 0.00 35.57 4.41
2071 2262 3.823873 ACTTTCGGTAAATCCAATGTGCA 59.176 39.130 0.00 0.00 35.57 4.57
2072 2263 4.083003 TGACTTTCGGTAAATCCAATGTGC 60.083 41.667 0.00 0.00 35.57 4.57
2073 2264 5.621197 TGACTTTCGGTAAATCCAATGTG 57.379 39.130 0.00 0.00 35.57 3.21
2074 2265 6.264518 AGTTTGACTTTCGGTAAATCCAATGT 59.735 34.615 0.00 0.00 35.57 2.71
2075 2266 6.677913 AGTTTGACTTTCGGTAAATCCAATG 58.322 36.000 0.00 0.00 35.57 2.82
2076 2267 6.894339 AGTTTGACTTTCGGTAAATCCAAT 57.106 33.333 0.00 0.00 35.57 3.16
2077 2268 6.702716 AAGTTTGACTTTCGGTAAATCCAA 57.297 33.333 0.00 0.00 34.11 3.53
2078 2269 6.500041 CAAAGTTTGACTTTCGGTAAATCCA 58.500 36.000 10.19 0.00 44.47 3.41
2079 2270 5.401376 GCAAAGTTTGACTTTCGGTAAATCC 59.599 40.000 19.82 0.00 44.47 3.01
2080 2271 6.206498 AGCAAAGTTTGACTTTCGGTAAATC 58.794 36.000 19.82 0.00 44.47 2.17
2081 2272 6.144078 AGCAAAGTTTGACTTTCGGTAAAT 57.856 33.333 19.82 0.00 44.47 1.40
2082 2273 5.570234 AGCAAAGTTTGACTTTCGGTAAA 57.430 34.783 19.82 0.00 44.47 2.01
2083 2274 6.316890 ACTTAGCAAAGTTTGACTTTCGGTAA 59.683 34.615 19.82 16.80 44.47 2.85
2084 2275 5.818857 ACTTAGCAAAGTTTGACTTTCGGTA 59.181 36.000 19.82 6.86 44.47 4.02
2085 2276 4.638865 ACTTAGCAAAGTTTGACTTTCGGT 59.361 37.500 19.82 9.27 44.47 4.69
2086 2277 5.169836 ACTTAGCAAAGTTTGACTTTCGG 57.830 39.130 19.82 8.79 44.47 4.30
2180 2371 9.857656 ACAACACCAATATCATTAGATTCATCT 57.142 29.630 0.00 0.00 40.86 2.90
2187 2378 9.898152 TCACATAACAACACCAATATCATTAGA 57.102 29.630 0.00 0.00 0.00 2.10
2192 2383 9.636879 CATTTTCACATAACAACACCAATATCA 57.363 29.630 0.00 0.00 0.00 2.15
2193 2384 9.638239 ACATTTTCACATAACAACACCAATATC 57.362 29.630 0.00 0.00 0.00 1.63
2194 2385 9.638239 GACATTTTCACATAACAACACCAATAT 57.362 29.630 0.00 0.00 0.00 1.28
2195 2386 8.855110 AGACATTTTCACATAACAACACCAATA 58.145 29.630 0.00 0.00 0.00 1.90
2196 2387 7.725251 AGACATTTTCACATAACAACACCAAT 58.275 30.769 0.00 0.00 0.00 3.16
2197 2388 7.106439 AGACATTTTCACATAACAACACCAA 57.894 32.000 0.00 0.00 0.00 3.67
2198 2389 6.707440 AGACATTTTCACATAACAACACCA 57.293 33.333 0.00 0.00 0.00 4.17
2239 2430 4.214971 CAGTCTCATCCAACTTTGACCAAG 59.785 45.833 0.00 0.00 38.64 3.61
2240 2431 4.136796 CAGTCTCATCCAACTTTGACCAA 58.863 43.478 0.00 0.00 0.00 3.67
2241 2432 3.390967 TCAGTCTCATCCAACTTTGACCA 59.609 43.478 0.00 0.00 0.00 4.02
2242 2433 3.748568 GTCAGTCTCATCCAACTTTGACC 59.251 47.826 0.00 0.00 0.00 4.02
2243 2434 4.636249 AGTCAGTCTCATCCAACTTTGAC 58.364 43.478 0.00 0.00 0.00 3.18
2244 2435 4.963318 AGTCAGTCTCATCCAACTTTGA 57.037 40.909 0.00 0.00 0.00 2.69
2245 2436 5.059161 TGAAGTCAGTCTCATCCAACTTTG 58.941 41.667 0.00 0.00 0.00 2.77
2246 2437 5.296151 TGAAGTCAGTCTCATCCAACTTT 57.704 39.130 0.00 0.00 0.00 2.66
2247 2438 4.963318 TGAAGTCAGTCTCATCCAACTT 57.037 40.909 0.00 0.00 0.00 2.66
2248 2439 4.963318 TTGAAGTCAGTCTCATCCAACT 57.037 40.909 0.00 0.00 0.00 3.16
2249 2440 4.816385 TGTTTGAAGTCAGTCTCATCCAAC 59.184 41.667 0.00 0.00 0.00 3.77
2250 2441 5.034852 TGTTTGAAGTCAGTCTCATCCAA 57.965 39.130 0.00 0.00 0.00 3.53
2251 2442 4.687901 TGTTTGAAGTCAGTCTCATCCA 57.312 40.909 0.00 0.00 0.00 3.41
2252 2443 5.278022 GGTTTGTTTGAAGTCAGTCTCATCC 60.278 44.000 0.00 0.00 0.00 3.51
2253 2444 5.529060 AGGTTTGTTTGAAGTCAGTCTCATC 59.471 40.000 0.00 0.00 0.00 2.92
2254 2445 5.440610 AGGTTTGTTTGAAGTCAGTCTCAT 58.559 37.500 0.00 0.00 0.00 2.90
2255 2446 4.843728 AGGTTTGTTTGAAGTCAGTCTCA 58.156 39.130 0.00 0.00 0.00 3.27
2256 2447 6.920569 TTAGGTTTGTTTGAAGTCAGTCTC 57.079 37.500 0.00 0.00 0.00 3.36
2257 2448 9.220767 GATATTAGGTTTGTTTGAAGTCAGTCT 57.779 33.333 0.00 0.00 0.00 3.24
2258 2449 8.451748 GGATATTAGGTTTGTTTGAAGTCAGTC 58.548 37.037 0.00 0.00 0.00 3.51
2259 2450 7.942341 TGGATATTAGGTTTGTTTGAAGTCAGT 59.058 33.333 0.00 0.00 0.00 3.41
2260 2451 8.335532 TGGATATTAGGTTTGTTTGAAGTCAG 57.664 34.615 0.00 0.00 0.00 3.51
2261 2452 8.160765 TCTGGATATTAGGTTTGTTTGAAGTCA 58.839 33.333 0.00 0.00 0.00 3.41
2262 2453 8.561738 TCTGGATATTAGGTTTGTTTGAAGTC 57.438 34.615 0.00 0.00 0.00 3.01
2263 2454 8.164070 ACTCTGGATATTAGGTTTGTTTGAAGT 58.836 33.333 0.00 0.00 0.00 3.01
2264 2455 8.567285 ACTCTGGATATTAGGTTTGTTTGAAG 57.433 34.615 0.00 0.00 0.00 3.02
2273 2464 9.628500 GGTCATTTTTACTCTGGATATTAGGTT 57.372 33.333 0.00 0.00 0.00 3.50
2274 2465 7.931948 CGGTCATTTTTACTCTGGATATTAGGT 59.068 37.037 0.00 0.00 0.00 3.08
2275 2466 7.387948 CCGGTCATTTTTACTCTGGATATTAGG 59.612 40.741 0.00 0.00 0.00 2.69
2276 2467 8.148351 TCCGGTCATTTTTACTCTGGATATTAG 58.852 37.037 0.00 0.00 0.00 1.73
2277 2468 8.025270 TCCGGTCATTTTTACTCTGGATATTA 57.975 34.615 0.00 0.00 0.00 0.98
2278 2469 6.895782 TCCGGTCATTTTTACTCTGGATATT 58.104 36.000 0.00 0.00 0.00 1.28
2279 2470 6.464465 CCTCCGGTCATTTTTACTCTGGATAT 60.464 42.308 0.00 0.00 0.00 1.63
2280 2471 5.163343 CCTCCGGTCATTTTTACTCTGGATA 60.163 44.000 0.00 0.00 0.00 2.59
2281 2472 4.384208 CCTCCGGTCATTTTTACTCTGGAT 60.384 45.833 0.00 0.00 0.00 3.41
2282 2473 3.055385 CCTCCGGTCATTTTTACTCTGGA 60.055 47.826 0.00 0.00 0.00 3.86
2283 2474 3.270877 CCTCCGGTCATTTTTACTCTGG 58.729 50.000 0.00 0.00 0.00 3.86
2284 2475 3.055385 TCCCTCCGGTCATTTTTACTCTG 60.055 47.826 0.00 0.00 0.00 3.35
2285 2476 3.178865 TCCCTCCGGTCATTTTTACTCT 58.821 45.455 0.00 0.00 0.00 3.24
2286 2477 3.055312 ACTCCCTCCGGTCATTTTTACTC 60.055 47.826 0.00 0.00 0.00 2.59
2287 2478 2.910977 ACTCCCTCCGGTCATTTTTACT 59.089 45.455 0.00 0.00 0.00 2.24
2288 2479 3.345508 ACTCCCTCCGGTCATTTTTAC 57.654 47.619 0.00 0.00 0.00 2.01
2289 2480 4.098894 AGTACTCCCTCCGGTCATTTTTA 58.901 43.478 0.00 0.00 0.00 1.52
2290 2481 2.910977 AGTACTCCCTCCGGTCATTTTT 59.089 45.455 0.00 0.00 0.00 1.94
2291 2482 2.547990 AGTACTCCCTCCGGTCATTTT 58.452 47.619 0.00 0.00 0.00 1.82
2292 2483 2.249309 AGTACTCCCTCCGGTCATTT 57.751 50.000 0.00 0.00 0.00 2.32
2293 2484 2.946785 CTAGTACTCCCTCCGGTCATT 58.053 52.381 0.00 0.00 0.00 2.57
2294 2485 1.479021 GCTAGTACTCCCTCCGGTCAT 60.479 57.143 0.00 0.00 0.00 3.06
2295 2486 0.106819 GCTAGTACTCCCTCCGGTCA 60.107 60.000 0.00 0.00 0.00 4.02
2296 2487 0.106819 TGCTAGTACTCCCTCCGGTC 60.107 60.000 0.00 0.00 0.00 4.79
2297 2488 0.106619 CTGCTAGTACTCCCTCCGGT 60.107 60.000 0.00 0.00 0.00 5.28
2298 2489 0.106619 ACTGCTAGTACTCCCTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
2299 2490 2.634815 TACTGCTAGTACTCCCTCCG 57.365 55.000 0.00 0.00 0.00 4.63
2300 2491 6.494146 ACAATTATACTGCTAGTACTCCCTCC 59.506 42.308 0.00 0.00 32.84 4.30
2301 2492 7.371936 CACAATTATACTGCTAGTACTCCCTC 58.628 42.308 0.00 0.00 32.84 4.30
2302 2493 6.239345 GCACAATTATACTGCTAGTACTCCCT 60.239 42.308 0.00 0.00 32.84 4.20
2303 2494 5.927115 GCACAATTATACTGCTAGTACTCCC 59.073 44.000 0.00 0.00 32.84 4.30
2304 2495 6.750148 AGCACAATTATACTGCTAGTACTCC 58.250 40.000 0.00 0.00 39.52 3.85
2305 2496 8.569641 AGTAGCACAATTATACTGCTAGTACTC 58.430 37.037 0.00 0.00 42.70 2.59
2306 2497 8.466617 AGTAGCACAATTATACTGCTAGTACT 57.533 34.615 0.00 0.00 42.70 2.73
2309 2500 9.303116 AGATAGTAGCACAATTATACTGCTAGT 57.697 33.333 12.91 12.91 45.18 2.57
2381 2576 0.447011 GCAGTGTTGCTCTCAGATGC 59.553 55.000 0.00 0.00 46.95 3.91
2400 2600 7.129109 TGAAAGCTTCCTCGTTAGTATTTTG 57.871 36.000 0.00 0.00 0.00 2.44
2412 2612 1.932511 CAGCGAGATGAAAGCTTCCTC 59.067 52.381 0.00 3.89 39.48 3.71
2519 2724 8.701895 AGAATCATATTTACTACCGTTCCAAGA 58.298 33.333 0.00 0.00 0.00 3.02
2524 2729 7.948278 AGCAGAATCATATTTACTACCGTTC 57.052 36.000 0.00 0.00 0.00 3.95
2527 2732 9.130312 GTAGAAGCAGAATCATATTTACTACCG 57.870 37.037 0.00 0.00 0.00 4.02
2634 2840 5.323371 TCTGTTGTTTGTTCCTTTCTTGG 57.677 39.130 0.00 0.00 0.00 3.61
2660 2866 2.318908 CTAGAGCTCTCTTCCCTGCAT 58.681 52.381 22.17 0.00 40.93 3.96
2661 2867 1.774110 CTAGAGCTCTCTTCCCTGCA 58.226 55.000 22.17 0.00 40.93 4.41
2662 2868 0.389025 GCTAGAGCTCTCTTCCCTGC 59.611 60.000 22.17 10.35 40.93 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.