Multiple sequence alignment - TraesCS2D01G586500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G586500 chr2D 100.000 5205 0 0 1 5205 644835595 644830391 0.000000e+00 9612.0
1 TraesCS2D01G586500 chr2D 97.500 40 1 0 5153 5192 250836854 250836893 9.350000e-08 69.4
2 TraesCS2D01G586500 chr2A 89.030 4339 238 112 305 4554 770103888 770108077 0.000000e+00 5156.0
3 TraesCS2D01G586500 chr2A 94.972 358 8 1 4858 5205 770108062 770108419 2.120000e-153 553.0
4 TraesCS2D01G586500 chr2A 94.839 310 15 1 4550 4858 51641247 51641556 2.820000e-132 483.0
5 TraesCS2D01G586500 chr2A 94.771 306 15 1 4554 4858 434579959 434580264 4.720000e-130 475.0
6 TraesCS2D01G586500 chr2A 97.984 248 5 0 3912 4159 770192371 770192618 1.040000e-116 431.0
7 TraesCS2D01G586500 chr2A 93.478 46 3 0 5153 5198 349918595 349918640 9.350000e-08 69.4
8 TraesCS2D01G586500 chr2A 93.478 46 3 0 5153 5198 506336131 506336176 9.350000e-08 69.4
9 TraesCS2D01G586500 chr2B 90.347 2424 104 70 2223 4554 790695087 790697472 0.000000e+00 3061.0
10 TraesCS2D01G586500 chr2B 84.548 1139 63 46 754 1839 790693497 790694575 0.000000e+00 1024.0
11 TraesCS2D01G586500 chr2B 91.873 283 5 7 4941 5205 790699484 790699766 3.800000e-101 379.0
12 TraesCS2D01G586500 chr2B 94.000 200 12 0 2 201 790692717 790692916 2.360000e-78 303.0
13 TraesCS2D01G586500 chr2B 78.349 545 41 36 213 704 790692972 790693492 1.100000e-71 281.0
14 TraesCS2D01G586500 chr2B 83.389 301 17 7 1943 2211 790694663 790694962 1.120000e-61 248.0
15 TraesCS2D01G586500 chr2B 89.610 77 7 1 4308 4384 790701663 790701738 4.290000e-16 97.1
16 TraesCS2D01G586500 chr2B 91.837 49 2 2 5156 5203 195612895 195612848 3.360000e-07 67.6
17 TraesCS2D01G586500 chr5D 95.177 311 14 1 4549 4858 520233854 520233544 1.680000e-134 490.0
18 TraesCS2D01G586500 chr5D 83.750 80 10 2 5053 5129 361646048 361645969 7.230000e-09 73.1
19 TraesCS2D01G586500 chr1B 95.380 303 13 1 4555 4856 683992175 683991873 1.010000e-131 481.0
20 TraesCS2D01G586500 chr5B 95.082 305 14 1 4555 4858 594098013 594097709 3.650000e-131 479.0
21 TraesCS2D01G586500 chr3B 95.082 305 14 1 4554 4857 449806850 449806546 3.650000e-131 479.0
22 TraesCS2D01G586500 chr3B 94.498 309 15 2 4552 4858 8039406 8039098 4.720000e-130 475.0
23 TraesCS2D01G586500 chr6B 95.066 304 12 3 4557 4858 675396234 675395932 4.720000e-130 475.0
24 TraesCS2D01G586500 chr6B 96.875 32 1 0 727 758 402714091 402714060 3.000000e-03 54.7
25 TraesCS2D01G586500 chr7D 94.481 308 16 1 4553 4859 548022383 548022690 1.700000e-129 473.0
26 TraesCS2D01G586500 chr7D 84.286 70 9 2 5070 5138 146631459 146631391 3.360000e-07 67.6
27 TraesCS2D01G586500 chr4A 89.683 126 10 2 4911 5033 467151353 467151228 1.940000e-34 158.0
28 TraesCS2D01G586500 chr4A 88.889 54 4 2 5153 5205 452838583 452838635 1.210000e-06 65.8
29 TraesCS2D01G586500 chr4D 88.095 126 12 2 4911 5033 109354779 109354904 4.200000e-31 147.0
30 TraesCS2D01G586500 chr4D 90.566 53 5 0 5153 5205 148928741 148928793 2.600000e-08 71.3
31 TraesCS2D01G586500 chr7A 87.097 124 13 2 4911 5033 251743256 251743377 2.530000e-28 137.0
32 TraesCS2D01G586500 chr7A 85.897 78 10 1 5053 5129 251743334 251743257 1.200000e-11 82.4
33 TraesCS2D01G586500 chr7A 93.478 46 3 0 5153 5198 296265957 296265912 9.350000e-08 69.4
34 TraesCS2D01G586500 chr7A 84.286 70 9 2 5070 5138 147927940 147927872 3.360000e-07 67.6
35 TraesCS2D01G586500 chr6D 83.051 118 20 0 4911 5028 438930831 438930948 1.980000e-19 108.0
36 TraesCS2D01G586500 chr6A 83.186 113 17 1 4911 5023 587857922 587858032 9.220000e-18 102.0
37 TraesCS2D01G586500 chr7B 97.368 38 1 0 3673 3710 714081923 714081886 1.210000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G586500 chr2D 644830391 644835595 5204 True 9612.000000 9612 100.000000 1 5205 1 chr2D.!!$R1 5204
1 TraesCS2D01G586500 chr2A 770103888 770108419 4531 False 2854.500000 5156 92.001000 305 5205 2 chr2A.!!$F6 4900
2 TraesCS2D01G586500 chr2B 790692717 790701738 9021 False 770.442857 3061 87.445143 2 5205 7 chr2B.!!$F1 5203

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
418 466 0.392998 CCTGAATTCCCCCACTCACG 60.393 60.0 2.27 0.00 0.00 4.35 F
1537 1694 0.171903 GTGCATGCATGTCCTTGTCC 59.828 55.0 25.64 8.94 0.00 4.02 F
1770 1941 0.366871 CGTACGTGTGCAGATGCTTC 59.633 55.0 7.22 0.50 42.66 3.86 F
2800 3165 0.032813 CATTCCCAATGGAGCCACCT 60.033 55.0 0.00 0.00 43.07 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2413 2762 0.033504 ATTCCATCGGGTCGGAATCG 59.966 55.000 0.00 0.0 46.81 3.34 R
2416 2765 0.689745 AGGATTCCATCGGGTCGGAA 60.690 55.000 5.29 0.0 45.12 4.30 R
3541 3980 1.000896 GAGGTTGATGTGGGTGGGG 60.001 63.158 0.00 0.0 0.00 4.96 R
4742 5190 0.031585 TCAGGATTTCCGGCGATACG 59.968 55.000 9.30 0.0 42.08 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 5.640732 TCTGAAAAGTGAAGTTGCAGTTTC 58.359 37.500 0.00 5.57 39.73 2.78
106 107 2.228138 AACCGAAGTCGCACTTTGTA 57.772 45.000 12.43 0.00 38.80 2.41
146 147 6.179906 AGAGAAAATCTTGACTGGTTGAGA 57.820 37.500 0.00 0.00 32.99 3.27
171 172 1.216064 TCAAGCCTAGGGATGCATGT 58.784 50.000 11.72 0.00 0.00 3.21
179 180 1.195115 AGGGATGCATGTAGACGTGT 58.805 50.000 2.46 0.00 35.38 4.49
180 181 1.137086 AGGGATGCATGTAGACGTGTC 59.863 52.381 2.46 0.00 35.38 3.67
201 202 5.128919 GTCCATAAAGAGTGCATCCATCTT 58.871 41.667 0.00 0.00 34.81 2.40
202 203 5.591877 GTCCATAAAGAGTGCATCCATCTTT 59.408 40.000 17.55 17.55 43.67 2.52
204 205 5.359009 CCATAAAGAGTGCATCCATCTTTGT 59.641 40.000 20.38 14.82 41.91 2.83
206 207 5.796424 AAAGAGTGCATCCATCTTTGTTT 57.204 34.783 14.52 0.00 40.74 2.83
208 209 5.886960 AGAGTGCATCCATCTTTGTTTAC 57.113 39.130 0.00 0.00 0.00 2.01
210 211 4.666512 AGTGCATCCATCTTTGTTTACCT 58.333 39.130 0.00 0.00 0.00 3.08
237 282 3.147553 TGTTTGAATTCATCGTGGGGA 57.852 42.857 9.40 0.00 0.00 4.81
244 289 4.640201 TGAATTCATCGTGGGGAAGAAATC 59.360 41.667 3.38 0.00 36.11 2.17
245 290 2.309528 TCATCGTGGGGAAGAAATCG 57.690 50.000 0.00 0.00 0.00 3.34
250 295 1.450025 GTGGGGAAGAAATCGTCACC 58.550 55.000 10.29 10.29 46.24 4.02
252 297 1.278127 TGGGGAAGAAATCGTCACCTC 59.722 52.381 16.79 1.39 46.22 3.85
255 300 3.388350 GGGGAAGAAATCGTCACCTCTAT 59.612 47.826 9.99 0.00 43.33 1.98
256 301 4.587684 GGGGAAGAAATCGTCACCTCTATA 59.412 45.833 9.99 0.00 43.33 1.31
265 310 5.148651 TCGTCACCTCTATATCGATCTCA 57.851 43.478 0.00 0.00 0.00 3.27
269 314 6.092807 CGTCACCTCTATATCGATCTCAATCA 59.907 42.308 0.00 0.00 31.76 2.57
271 316 8.300286 GTCACCTCTATATCGATCTCAATCAAA 58.700 37.037 0.00 0.00 31.76 2.69
275 320 9.920133 CCTCTATATCGATCTCAATCAAAAAGA 57.080 33.333 0.00 0.00 31.76 2.52
291 336 5.475220 TCAAAAAGAAATGAGCCGGTTCATA 59.525 36.000 30.89 11.79 36.81 2.15
294 339 4.422073 AGAAATGAGCCGGTTCATATGA 57.578 40.909 30.89 5.96 36.81 2.15
328 373 4.858692 CGAAAACCATGATCCAATTCACAC 59.141 41.667 0.00 0.00 0.00 3.82
399 447 7.801716 TCCTAGCAAATCCATGTGTAATTAC 57.198 36.000 8.75 8.75 0.00 1.89
403 451 6.186957 AGCAAATCCATGTGTAATTACCTGA 58.813 36.000 13.01 3.22 0.00 3.86
406 454 7.981225 GCAAATCCATGTGTAATTACCTGAATT 59.019 33.333 13.01 1.67 40.90 2.17
407 455 9.520204 CAAATCCATGTGTAATTACCTGAATTC 57.480 33.333 13.01 0.00 38.70 2.17
409 457 6.126409 TCCATGTGTAATTACCTGAATTCCC 58.874 40.000 13.01 0.00 38.70 3.97
410 458 5.301805 CCATGTGTAATTACCTGAATTCCCC 59.698 44.000 13.01 0.00 38.70 4.81
411 459 4.862371 TGTGTAATTACCTGAATTCCCCC 58.138 43.478 13.01 0.00 38.70 5.40
412 460 4.292571 TGTGTAATTACCTGAATTCCCCCA 59.707 41.667 13.01 0.00 38.70 4.96
414 462 4.542525 TGTAATTACCTGAATTCCCCCACT 59.457 41.667 13.01 0.00 38.70 4.00
418 466 0.392998 CCTGAATTCCCCCACTCACG 60.393 60.000 2.27 0.00 0.00 4.35
422 477 0.774908 AATTCCCCCACTCACGGAAA 59.225 50.000 0.00 0.00 39.07 3.13
481 540 3.055719 CGCCGGTGCATGGAGTTT 61.056 61.111 11.80 0.00 37.32 2.66
483 542 1.800681 GCCGGTGCATGGAGTTTAC 59.199 57.895 11.80 0.00 37.47 2.01
485 544 1.086696 CCGGTGCATGGAGTTTACAG 58.913 55.000 1.85 0.00 0.00 2.74
486 545 1.086696 CGGTGCATGGAGTTTACAGG 58.913 55.000 0.00 0.00 0.00 4.00
487 546 0.811281 GGTGCATGGAGTTTACAGGC 59.189 55.000 0.00 0.00 45.03 4.85
552 629 1.401199 GAAGCTTCTTGAGATGCCAGC 59.599 52.381 19.44 5.10 43.68 4.85
553 630 0.619505 AGCTTCTTGAGATGCCAGCT 59.380 50.000 13.36 7.08 43.68 4.24
554 631 0.733729 GCTTCTTGAGATGCCAGCTG 59.266 55.000 6.78 6.78 38.73 4.24
555 632 0.733729 CTTCTTGAGATGCCAGCTGC 59.266 55.000 8.66 4.57 41.77 5.25
564 641 4.988486 GCCAGCTGCACACAACGC 62.988 66.667 8.66 0.00 40.77 4.84
565 642 3.585020 CCAGCTGCACACAACGCA 61.585 61.111 8.66 0.00 37.88 5.24
570 647 3.886694 TGCACACAACGCAGGCAC 61.887 61.111 0.00 0.00 33.55 5.01
575 667 2.108157 ACAACGCAGGCACGAGAA 59.892 55.556 6.95 0.00 36.70 2.87
578 670 1.961277 AACGCAGGCACGAGAAAGG 60.961 57.895 6.95 0.00 36.70 3.11
579 671 2.048222 CGCAGGCACGAGAAAGGA 60.048 61.111 0.00 0.00 34.06 3.36
608 700 2.185310 ATCGTGGTGTGCTTCCTCCC 62.185 60.000 0.00 0.00 0.00 4.30
609 701 2.034221 GTGGTGTGCTTCCTCCCC 59.966 66.667 0.00 0.00 0.00 4.81
622 714 0.842467 CCTCCCCTCCTGTTTCCACT 60.842 60.000 0.00 0.00 0.00 4.00
623 715 0.615850 CTCCCCTCCTGTTTCCACTC 59.384 60.000 0.00 0.00 0.00 3.51
988 1119 2.939103 CGAGGGGATAAAGCAGACAAAG 59.061 50.000 0.00 0.00 0.00 2.77
989 1120 2.685388 GAGGGGATAAAGCAGACAAAGC 59.315 50.000 0.00 0.00 0.00 3.51
990 1121 2.041620 AGGGGATAAAGCAGACAAAGCA 59.958 45.455 0.00 0.00 0.00 3.91
1093 1231 0.320771 CTTCTACAAGCTGGCCGTGT 60.321 55.000 0.00 2.06 39.51 4.49
1094 1232 0.320421 TTCTACAAGCTGGCCGTGTC 60.320 55.000 0.00 0.00 37.36 3.67
1187 1325 2.029838 TACTTCGTCGAGAGGTACCC 57.970 55.000 8.74 0.00 39.97 3.69
1303 1445 7.944000 TGCATTATATTCCCAAGCATCTAGAAA 59.056 33.333 0.00 0.00 0.00 2.52
1416 1567 8.604640 AGTTTTAGGTGAGCTTCTTTTACTAC 57.395 34.615 0.00 0.00 0.00 2.73
1417 1568 8.430431 AGTTTTAGGTGAGCTTCTTTTACTACT 58.570 33.333 0.00 0.00 0.00 2.57
1418 1569 9.702494 GTTTTAGGTGAGCTTCTTTTACTACTA 57.298 33.333 0.00 0.00 0.00 1.82
1420 1571 9.924650 TTTAGGTGAGCTTCTTTTACTACTAAG 57.075 33.333 0.00 0.00 0.00 2.18
1465 1616 5.288804 TCATTAGTGTTCTTGCCTTTTTGC 58.711 37.500 0.00 0.00 0.00 3.68
1537 1694 0.171903 GTGCATGCATGTCCTTGTCC 59.828 55.000 25.64 8.94 0.00 4.02
1681 1842 5.813157 GCTTCCTTCTCCTATTATATTCCGC 59.187 44.000 0.00 0.00 0.00 5.54
1700 1861 3.376540 CGCCGTTGGAAAAAGAATTCAA 58.623 40.909 8.44 0.00 0.00 2.69
1769 1940 1.626654 GCGTACGTGTGCAGATGCTT 61.627 55.000 17.90 0.00 42.66 3.91
1770 1941 0.366871 CGTACGTGTGCAGATGCTTC 59.633 55.000 7.22 0.50 42.66 3.86
1771 1942 1.428448 GTACGTGTGCAGATGCTTCA 58.572 50.000 2.38 3.10 42.66 3.02
1829 2000 2.560504 TGCATGCTACCTGATTAACGG 58.439 47.619 20.33 0.00 0.00 4.44
2025 2214 2.709883 GCGAGTCCTGCTGCTCTCT 61.710 63.158 0.00 0.00 0.00 3.10
2029 2218 1.274728 GAGTCCTGCTGCTCTCTTTCA 59.725 52.381 0.00 0.00 0.00 2.69
2098 2306 9.562583 GTTGTTGTTGTTTCATTTTACTCTACA 57.437 29.630 0.00 0.00 0.00 2.74
2178 2397 0.679960 GGCTGCCGGAATTTAGGTGT 60.680 55.000 5.05 0.00 0.00 4.16
2184 2403 0.725117 CGGAATTTAGGTGTGACGCC 59.275 55.000 7.17 7.17 0.00 5.68
2352 2690 4.423625 ACCTTCCTTTTCCATCTATCCG 57.576 45.455 0.00 0.00 0.00 4.18
2364 2702 0.886043 TCTATCCGGCACATGCATGC 60.886 55.000 26.53 15.36 45.34 4.06
2411 2760 3.508845 AGTTAGGCACAACCAACTGAT 57.491 42.857 0.00 0.00 43.14 2.90
2412 2761 3.412386 AGTTAGGCACAACCAACTGATC 58.588 45.455 0.00 0.00 43.14 2.92
2413 2762 2.488153 GTTAGGCACAACCAACTGATCC 59.512 50.000 0.00 0.00 43.14 3.36
2414 2763 0.606401 AGGCACAACCAACTGATCCG 60.606 55.000 0.00 0.00 43.14 4.18
2415 2764 0.605319 GGCACAACCAACTGATCCGA 60.605 55.000 0.00 0.00 38.86 4.55
2416 2765 1.453155 GCACAACCAACTGATCCGAT 58.547 50.000 0.00 0.00 0.00 4.18
2435 2784 0.689745 TTCCGACCCGATGGAATCCT 60.690 55.000 0.00 0.00 41.39 3.24
2452 2801 2.594131 TCCTCTGCCGCTAGCTTTATA 58.406 47.619 13.93 0.00 44.23 0.98
2478 2827 2.356665 TGCCTGCCAAACAAAGTAGA 57.643 45.000 0.00 0.00 0.00 2.59
2479 2828 2.229792 TGCCTGCCAAACAAAGTAGAG 58.770 47.619 0.00 0.00 0.00 2.43
2485 2834 5.049405 CCTGCCAAACAAAGTAGAGTACAAG 60.049 44.000 0.00 0.00 0.00 3.16
2499 2848 1.198637 GTACAAGCTCCACGTACGTCT 59.801 52.381 19.94 9.88 0.00 4.18
2502 2851 1.467734 CAAGCTCCACGTACGTCTAGT 59.532 52.381 19.94 6.83 0.00 2.57
2503 2852 2.674852 CAAGCTCCACGTACGTCTAGTA 59.325 50.000 19.94 1.27 0.00 1.82
2535 2884 3.206964 TCACTTTACAAACCGTGCATGA 58.793 40.909 7.72 0.00 0.00 3.07
2543 2892 1.442769 AACCGTGCATGAAGCTACTG 58.557 50.000 7.72 0.00 45.94 2.74
2622 2973 0.389817 TCACTGTACTCACGCATGCC 60.390 55.000 13.15 0.00 0.00 4.40
2628 2979 2.889154 TACTCACGCATGCCTGCTCG 62.889 60.000 13.15 0.00 46.65 5.03
2662 3016 0.034059 CACCGATGGAGCCACCTATC 59.966 60.000 0.00 0.00 39.86 2.08
2798 3163 0.971959 TGCATTCCCAATGGAGCCAC 60.972 55.000 0.00 0.00 43.07 5.01
2799 3164 1.679559 GCATTCCCAATGGAGCCACC 61.680 60.000 0.00 0.00 43.07 4.61
2800 3165 0.032813 CATTCCCAATGGAGCCACCT 60.033 55.000 0.00 0.00 43.07 4.00
2801 3166 0.712380 ATTCCCAATGGAGCCACCTT 59.288 50.000 0.00 0.00 43.07 3.50
2802 3167 0.486879 TTCCCAATGGAGCCACCTTT 59.513 50.000 0.00 0.00 43.07 3.11
2803 3168 0.251742 TCCCAATGGAGCCACCTTTG 60.252 55.000 0.00 14.83 46.68 2.77
2804 3169 0.542702 CCCAATGGAGCCACCTTTGT 60.543 55.000 18.07 0.00 46.10 2.83
2809 3174 1.376037 GGAGCCACCTTTGTCTCGG 60.376 63.158 0.00 0.00 35.41 4.63
2883 3248 3.758554 CGTCACCTTCTTTTCCAATGGAT 59.241 43.478 1.39 0.00 0.00 3.41
2886 3251 5.420104 GTCACCTTCTTTTCCAATGGATGAT 59.580 40.000 1.39 0.00 0.00 2.45
2888 3253 7.286316 GTCACCTTCTTTTCCAATGGATGATAT 59.714 37.037 1.39 0.00 0.00 1.63
2891 3256 6.779049 CCTTCTTTTCCAATGGATGATATGGA 59.221 38.462 1.39 0.00 40.10 3.41
2893 3258 8.413309 TTCTTTTCCAATGGATGATATGGATC 57.587 34.615 1.39 0.00 41.36 3.36
2947 3330 6.561614 TCTATCGTCATGTTTCTTGGACTAC 58.438 40.000 0.00 0.00 0.00 2.73
2948 3331 3.571571 TCGTCATGTTTCTTGGACTACG 58.428 45.455 0.00 0.00 0.00 3.51
2949 3332 3.005050 TCGTCATGTTTCTTGGACTACGT 59.995 43.478 0.00 0.00 0.00 3.57
2953 3336 6.134061 GTCATGTTTCTTGGACTACGTTTTC 58.866 40.000 0.00 0.00 0.00 2.29
2958 3350 5.978934 TTCTTGGACTACGTTTTCTTCAC 57.021 39.130 0.00 0.00 0.00 3.18
2990 3405 3.862402 CGCCTAGCTCGTCGTCGT 61.862 66.667 1.33 0.00 38.33 4.34
2994 3409 1.437772 CCTAGCTCGTCGTCGTCCAT 61.438 60.000 1.33 0.00 38.33 3.41
2996 3411 2.319011 TAGCTCGTCGTCGTCCATGC 62.319 60.000 1.33 1.22 38.33 4.06
3010 3425 2.176273 CATGCTGCACGTCCCTAGC 61.176 63.158 3.57 0.00 36.72 3.42
3013 3428 1.066587 GCTGCACGTCCCTAGCTAG 59.933 63.158 14.20 14.20 33.53 3.42
3018 3433 4.262617 CTGCACGTCCCTAGCTAGATATA 58.737 47.826 22.70 1.44 0.00 0.86
3064 3483 0.179018 AGCTGTGGAACTTGGTCACC 60.179 55.000 0.00 0.00 38.04 4.02
3114 3533 2.763248 GACGTGTGTCATCGTGCG 59.237 61.111 9.99 0.00 44.82 5.34
3164 3590 4.213674 TGTATACGTGTGATCGATTACGC 58.786 43.478 20.50 20.50 39.94 4.42
3168 3594 0.577269 GTGTGATCGATTACGCTGCC 59.423 55.000 22.44 3.16 39.58 4.85
3181 3608 2.710377 ACGCTGCCTTGAATGTTGATA 58.290 42.857 0.00 0.00 0.00 2.15
3602 4041 1.154672 CAACACGACGAACATGCCG 60.155 57.895 0.00 6.56 0.00 5.69
3804 4243 4.452733 CTGCTTCGACCGGGACCC 62.453 72.222 6.32 0.00 0.00 4.46
3856 4295 1.086067 TACTCGCCGTCCTCTACACG 61.086 60.000 0.00 0.00 36.99 4.49
3908 4347 1.668294 CTCTCCTGGTGCGTCAAGT 59.332 57.895 0.00 0.00 0.00 3.16
3910 4349 1.669115 CTCCTGGTGCGTCAAGTGG 60.669 63.158 0.00 0.00 0.00 4.00
4045 4484 0.467474 TCATCGTGACGGGCCTCTAT 60.467 55.000 4.70 0.00 0.00 1.98
4514 4962 6.754193 ACAAACCAATAAATTTCGGACACAT 58.246 32.000 0.00 0.00 0.00 3.21
4554 5002 9.750125 GAGAAATCAACTCCATTTTACAACTTT 57.250 29.630 0.00 0.00 0.00 2.66
4580 5028 6.561737 TTTTTGAACACAGTACAGACACAA 57.438 33.333 0.00 0.00 0.00 3.33
4581 5029 5.794687 TTTGAACACAGTACAGACACAAG 57.205 39.130 0.00 0.00 0.00 3.16
4582 5030 3.194861 TGAACACAGTACAGACACAAGC 58.805 45.455 0.00 0.00 0.00 4.01
4583 5031 1.852942 ACACAGTACAGACACAAGCG 58.147 50.000 0.00 0.00 0.00 4.68
4584 5032 0.508641 CACAGTACAGACACAAGCGC 59.491 55.000 0.00 0.00 0.00 5.92
4585 5033 0.389391 ACAGTACAGACACAAGCGCT 59.611 50.000 2.64 2.64 0.00 5.92
4586 5034 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
4587 5035 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
4588 5036 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
4589 5037 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
4590 5038 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
4591 5039 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
4592 5040 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
4593 5041 2.469147 CAGACACAAGCGCTCATATACG 59.531 50.000 12.06 0.00 0.00 3.06
4599 5047 3.916439 CGCTCATATACGCACGCA 58.084 55.556 0.00 0.00 0.00 5.24
4600 5048 2.434688 CGCTCATATACGCACGCAT 58.565 52.632 0.00 0.00 0.00 4.73
4601 5049 1.613270 CGCTCATATACGCACGCATA 58.387 50.000 0.00 0.00 0.00 3.14
4602 5050 1.317611 CGCTCATATACGCACGCATAC 59.682 52.381 0.00 0.00 0.00 2.39
4603 5051 2.324860 GCTCATATACGCACGCATACA 58.675 47.619 0.00 0.00 0.00 2.29
4604 5052 2.090658 GCTCATATACGCACGCATACAC 59.909 50.000 0.00 0.00 0.00 2.90
4605 5053 3.565516 CTCATATACGCACGCATACACT 58.434 45.455 0.00 0.00 0.00 3.55
4606 5054 3.561503 TCATATACGCACGCATACACTC 58.438 45.455 0.00 0.00 0.00 3.51
4607 5055 3.003897 TCATATACGCACGCATACACTCA 59.996 43.478 0.00 0.00 0.00 3.41
4608 5056 1.556564 ATACGCACGCATACACTCAC 58.443 50.000 0.00 0.00 0.00 3.51
4609 5057 0.457166 TACGCACGCATACACTCACC 60.457 55.000 0.00 0.00 0.00 4.02
4610 5058 2.452813 CGCACGCATACACTCACCC 61.453 63.158 0.00 0.00 0.00 4.61
4611 5059 2.106683 GCACGCATACACTCACCCC 61.107 63.158 0.00 0.00 0.00 4.95
4612 5060 1.596934 CACGCATACACTCACCCCT 59.403 57.895 0.00 0.00 0.00 4.79
4613 5061 0.821517 CACGCATACACTCACCCCTA 59.178 55.000 0.00 0.00 0.00 3.53
4614 5062 1.412710 CACGCATACACTCACCCCTAT 59.587 52.381 0.00 0.00 0.00 2.57
4615 5063 1.412710 ACGCATACACTCACCCCTATG 59.587 52.381 0.00 0.00 0.00 2.23
4616 5064 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
4617 5065 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
4618 5066 3.431626 CGCATACACTCACCCCTATGAAA 60.432 47.826 0.00 0.00 0.00 2.69
4619 5067 4.130118 GCATACACTCACCCCTATGAAAG 58.870 47.826 0.00 0.00 0.00 2.62
4620 5068 2.789409 ACACTCACCCCTATGAAAGC 57.211 50.000 0.00 0.00 0.00 3.51
4621 5069 1.985159 ACACTCACCCCTATGAAAGCA 59.015 47.619 0.00 0.00 0.00 3.91
4622 5070 2.290323 ACACTCACCCCTATGAAAGCAC 60.290 50.000 0.00 0.00 0.00 4.40
4623 5071 1.985159 ACTCACCCCTATGAAAGCACA 59.015 47.619 0.00 0.00 0.00 4.57
4624 5072 2.290323 ACTCACCCCTATGAAAGCACAC 60.290 50.000 0.00 0.00 0.00 3.82
4625 5073 1.702401 TCACCCCTATGAAAGCACACA 59.298 47.619 0.00 0.00 0.00 3.72
4626 5074 2.086869 CACCCCTATGAAAGCACACAG 58.913 52.381 0.00 0.00 0.00 3.66
4627 5075 1.004745 ACCCCTATGAAAGCACACAGG 59.995 52.381 0.00 0.00 0.00 4.00
4628 5076 1.098050 CCCTATGAAAGCACACAGGC 58.902 55.000 0.00 0.00 0.00 4.85
4629 5077 1.614051 CCCTATGAAAGCACACAGGCA 60.614 52.381 0.00 0.00 35.83 4.75
4630 5078 1.470098 CCTATGAAAGCACACAGGCAC 59.530 52.381 0.00 0.00 35.83 5.01
4631 5079 2.153645 CTATGAAAGCACACAGGCACA 58.846 47.619 0.00 0.00 35.83 4.57
4632 5080 0.670162 ATGAAAGCACACAGGCACAC 59.330 50.000 0.00 0.00 35.83 3.82
4633 5081 1.360192 GAAAGCACACAGGCACACC 59.640 57.895 0.00 0.00 35.83 4.16
4634 5082 2.075426 GAAAGCACACAGGCACACCC 62.075 60.000 0.00 0.00 36.11 4.61
4636 5084 1.705002 AAGCACACAGGCACACCCTA 61.705 55.000 0.00 0.00 44.09 3.53
4637 5085 1.966451 GCACACAGGCACACCCTAC 60.966 63.158 0.00 0.00 44.09 3.18
4638 5086 1.302511 CACACAGGCACACCCTACC 60.303 63.158 0.00 0.00 44.09 3.18
4639 5087 2.351276 CACAGGCACACCCTACCC 59.649 66.667 0.00 0.00 44.09 3.69
4640 5088 2.933834 ACAGGCACACCCTACCCC 60.934 66.667 0.00 0.00 44.09 4.95
4641 5089 2.610859 CAGGCACACCCTACCCCT 60.611 66.667 0.00 0.00 44.09 4.79
4642 5090 1.306654 CAGGCACACCCTACCCCTA 60.307 63.158 0.00 0.00 44.09 3.53
4643 5091 0.694444 CAGGCACACCCTACCCCTAT 60.694 60.000 0.00 0.00 44.09 2.57
4644 5092 0.694444 AGGCACACCCTACCCCTATG 60.694 60.000 0.00 0.00 44.08 2.23
4645 5093 0.693092 GGCACACCCTACCCCTATGA 60.693 60.000 0.00 0.00 0.00 2.15
4646 5094 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
4647 5095 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
4648 5096 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
4649 5097 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
4650 5098 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
4651 5099 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
4652 5100 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
4653 5101 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
4654 5102 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
4655 5103 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
4656 5104 1.048724 CCCCTATGAGCACCTCCGAA 61.049 60.000 0.00 0.00 0.00 4.30
4657 5105 0.830648 CCCTATGAGCACCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
4658 5106 1.202580 CCCTATGAGCACCTCCGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
4659 5107 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
4660 5108 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
4661 5109 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
4662 5110 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
4663 5111 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
4664 5112 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
4665 5113 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
4666 5114 0.390472 CACCTCCGAAAGACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
4667 5115 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
4668 5116 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
4669 5117 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
4670 5118 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
4671 5119 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
4672 5120 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
4673 5121 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
4674 5122 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
4675 5123 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
4676 5124 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
4677 5125 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
4678 5126 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
4679 5127 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
4680 5128 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
4681 5129 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
4682 5130 2.104622 TGAGCCGGCATATCATCTTGAA 59.895 45.455 31.54 0.00 0.00 2.69
4683 5131 3.141398 GAGCCGGCATATCATCTTGAAA 58.859 45.455 31.54 0.00 0.00 2.69
4684 5132 3.755378 GAGCCGGCATATCATCTTGAAAT 59.245 43.478 31.54 0.06 0.00 2.17
4685 5133 4.147321 AGCCGGCATATCATCTTGAAATT 58.853 39.130 31.54 0.00 0.00 1.82
4686 5134 4.586001 AGCCGGCATATCATCTTGAAATTT 59.414 37.500 31.54 0.00 0.00 1.82
4687 5135 5.769662 AGCCGGCATATCATCTTGAAATTTA 59.230 36.000 31.54 0.00 0.00 1.40
4688 5136 5.858581 GCCGGCATATCATCTTGAAATTTAC 59.141 40.000 24.80 0.00 0.00 2.01
4689 5137 6.079763 CCGGCATATCATCTTGAAATTTACG 58.920 40.000 0.00 0.00 0.00 3.18
4690 5138 6.073276 CCGGCATATCATCTTGAAATTTACGA 60.073 38.462 0.00 0.00 0.00 3.43
4691 5139 7.011773 CGGCATATCATCTTGAAATTTACGAG 58.988 38.462 0.00 0.00 0.00 4.18
4692 5140 7.301054 GGCATATCATCTTGAAATTTACGAGG 58.699 38.462 0.00 0.00 0.00 4.63
4693 5141 7.041098 GGCATATCATCTTGAAATTTACGAGGT 60.041 37.037 0.00 0.00 0.00 3.85
4694 5142 8.012241 GCATATCATCTTGAAATTTACGAGGTC 58.988 37.037 0.00 0.00 0.00 3.85
4695 5143 9.045223 CATATCATCTTGAAATTTACGAGGTCA 57.955 33.333 0.00 0.00 0.00 4.02
4696 5144 6.721571 TCATCTTGAAATTTACGAGGTCAC 57.278 37.500 0.00 0.00 0.00 3.67
4697 5145 5.642063 TCATCTTGAAATTTACGAGGTCACC 59.358 40.000 0.00 0.00 0.00 4.02
4698 5146 3.991773 TCTTGAAATTTACGAGGTCACCG 59.008 43.478 0.00 0.00 0.00 4.94
4699 5147 3.389925 TGAAATTTACGAGGTCACCGT 57.610 42.857 0.00 0.00 43.26 4.83
4700 5148 4.517952 TGAAATTTACGAGGTCACCGTA 57.482 40.909 0.00 0.00 40.95 4.02
4701 5149 4.487948 TGAAATTTACGAGGTCACCGTAG 58.512 43.478 0.00 0.00 42.42 3.51
4713 5161 3.207354 CCGTAGGCACCTCATCGT 58.793 61.111 0.00 0.00 46.14 3.73
4714 5162 1.065928 CCGTAGGCACCTCATCGTC 59.934 63.158 0.00 0.00 46.14 4.20
4715 5163 1.298413 CGTAGGCACCTCATCGTCG 60.298 63.158 0.00 0.00 0.00 5.12
4716 5164 1.712018 CGTAGGCACCTCATCGTCGA 61.712 60.000 0.00 0.00 0.00 4.20
4717 5165 0.248539 GTAGGCACCTCATCGTCGAC 60.249 60.000 5.18 5.18 0.00 4.20
4718 5166 1.712018 TAGGCACCTCATCGTCGACG 61.712 60.000 31.30 31.30 41.45 5.12
4719 5167 2.579787 GCACCTCATCGTCGACGG 60.580 66.667 35.05 21.47 40.29 4.79
4720 5168 2.102357 CACCTCATCGTCGACGGG 59.898 66.667 35.05 28.87 40.29 5.28
4721 5169 2.045634 ACCTCATCGTCGACGGGA 60.046 61.111 35.05 28.98 40.29 5.14
4722 5170 1.676635 ACCTCATCGTCGACGGGAA 60.677 57.895 35.05 18.80 40.29 3.97
4723 5171 1.226603 CCTCATCGTCGACGGGAAC 60.227 63.158 35.05 0.00 40.29 3.62
4736 5184 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
4737 5185 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
4738 5186 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
4739 5187 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
4740 5188 1.550976 GAACGTCTCCTCCCACTGAAT 59.449 52.381 0.00 0.00 0.00 2.57
4741 5189 0.898320 ACGTCTCCTCCCACTGAATG 59.102 55.000 0.00 0.00 0.00 2.67
4742 5190 0.460987 CGTCTCCTCCCACTGAATGC 60.461 60.000 0.00 0.00 0.00 3.56
4743 5191 0.460987 GTCTCCTCCCACTGAATGCG 60.461 60.000 0.00 0.00 0.00 4.73
4744 5192 0.904865 TCTCCTCCCACTGAATGCGT 60.905 55.000 0.00 0.00 0.00 5.24
4745 5193 0.824109 CTCCTCCCACTGAATGCGTA 59.176 55.000 0.00 0.00 0.00 4.42
4746 5194 1.414181 CTCCTCCCACTGAATGCGTAT 59.586 52.381 0.00 0.00 0.00 3.06
4747 5195 1.412710 TCCTCCCACTGAATGCGTATC 59.587 52.381 0.00 0.00 0.00 2.24
4748 5196 1.491670 CTCCCACTGAATGCGTATCG 58.508 55.000 0.00 0.00 0.00 2.92
4760 5208 2.517598 CGTATCGCCGGAAATCCTG 58.482 57.895 5.05 0.00 0.00 3.86
4761 5209 0.031585 CGTATCGCCGGAAATCCTGA 59.968 55.000 5.05 0.00 0.00 3.86
4762 5210 1.537348 CGTATCGCCGGAAATCCTGAA 60.537 52.381 5.05 0.00 0.00 3.02
4763 5211 2.557317 GTATCGCCGGAAATCCTGAAA 58.443 47.619 5.05 0.00 0.00 2.69
4764 5212 2.348411 ATCGCCGGAAATCCTGAAAT 57.652 45.000 5.05 0.00 0.00 2.17
4765 5213 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
4766 5214 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
4767 5215 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
4768 5216 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
4769 5217 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
4770 5218 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
4771 5219 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
4772 5220 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
4773 5221 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
4783 5231 8.511465 CTGAAATAAATCCAGGAATAAATGCG 57.489 34.615 0.00 0.00 0.00 4.73
4784 5232 8.231692 TGAAATAAATCCAGGAATAAATGCGA 57.768 30.769 0.00 0.00 0.00 5.10
4785 5233 8.352201 TGAAATAAATCCAGGAATAAATGCGAG 58.648 33.333 0.00 0.00 0.00 5.03
4786 5234 4.574599 AAATCCAGGAATAAATGCGAGC 57.425 40.909 0.00 0.00 0.00 5.03
4787 5235 2.708216 TCCAGGAATAAATGCGAGCA 57.292 45.000 0.00 0.00 0.00 4.26
4788 5236 2.288666 TCCAGGAATAAATGCGAGCAC 58.711 47.619 0.00 0.00 0.00 4.40
4789 5237 1.334869 CCAGGAATAAATGCGAGCACC 59.665 52.381 0.00 0.00 0.00 5.01
4790 5238 2.016318 CAGGAATAAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
4791 5239 2.032550 CAGGAATAAATGCGAGCACCAG 59.967 50.000 0.00 0.00 0.00 4.00
4792 5240 1.334869 GGAATAAATGCGAGCACCAGG 59.665 52.381 0.00 0.00 0.00 4.45
4793 5241 2.288666 GAATAAATGCGAGCACCAGGA 58.711 47.619 0.00 0.00 0.00 3.86
4794 5242 2.645838 ATAAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
4795 5243 2.418368 TAAATGCGAGCACCAGGATT 57.582 45.000 0.00 0.00 0.00 3.01
4796 5244 1.549203 AAATGCGAGCACCAGGATTT 58.451 45.000 0.00 0.00 34.37 2.17
4797 5245 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
4798 5246 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
4799 5247 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
4800 5248 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
4801 5249 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
4802 5250 1.611673 CGAGCACCAGGATTTGAACCT 60.612 52.381 0.00 0.00 38.40 3.50
4803 5251 2.519013 GAGCACCAGGATTTGAACCTT 58.481 47.619 0.00 0.00 35.35 3.50
4804 5252 2.229784 GAGCACCAGGATTTGAACCTTG 59.770 50.000 0.00 0.00 35.35 3.61
4805 5253 1.273327 GCACCAGGATTTGAACCTTGG 59.727 52.381 0.00 0.00 35.35 3.61
4806 5254 2.597455 CACCAGGATTTGAACCTTGGT 58.403 47.619 0.00 0.00 38.47 3.67
4807 5255 2.297033 CACCAGGATTTGAACCTTGGTG 59.703 50.000 5.13 5.13 43.12 4.17
4808 5256 1.895131 CCAGGATTTGAACCTTGGTGG 59.105 52.381 0.00 0.00 42.93 4.61
4809 5257 1.895131 CAGGATTTGAACCTTGGTGGG 59.105 52.381 0.00 0.00 41.11 4.61
4810 5258 0.608130 GGATTTGAACCTTGGTGGGC 59.392 55.000 0.00 0.00 41.11 5.36
4811 5259 1.632589 GATTTGAACCTTGGTGGGCT 58.367 50.000 0.00 0.00 41.11 5.19
4812 5260 1.273327 GATTTGAACCTTGGTGGGCTG 59.727 52.381 0.00 0.00 41.11 4.85
4813 5261 0.758685 TTTGAACCTTGGTGGGCTGG 60.759 55.000 0.00 0.00 41.11 4.85
4814 5262 2.283173 GAACCTTGGTGGGCTGGG 60.283 66.667 0.00 0.00 41.11 4.45
4815 5263 3.886550 GAACCTTGGTGGGCTGGGG 62.887 68.421 0.00 0.00 41.11 4.96
4817 5265 3.914713 CCTTGGTGGGCTGGGGTT 61.915 66.667 0.00 0.00 0.00 4.11
4818 5266 2.543797 CCTTGGTGGGCTGGGGTTA 61.544 63.158 0.00 0.00 0.00 2.85
4819 5267 1.304134 CTTGGTGGGCTGGGGTTAC 60.304 63.158 0.00 0.00 0.00 2.50
4820 5268 2.781431 CTTGGTGGGCTGGGGTTACC 62.781 65.000 0.00 0.00 40.81 2.85
4822 5270 2.035155 GTGGGCTGGGGTTACCAC 59.965 66.667 2.98 0.00 46.80 4.16
4823 5271 2.450699 TGGGCTGGGGTTACCACA 60.451 61.111 6.06 6.06 46.80 4.17
4824 5272 2.355115 GGGCTGGGGTTACCACAG 59.645 66.667 27.99 27.99 46.80 3.66
4825 5273 2.535331 GGGCTGGGGTTACCACAGT 61.535 63.158 31.28 0.00 46.80 3.55
4826 5274 1.002502 GGCTGGGGTTACCACAGTC 60.003 63.158 31.28 27.58 46.80 3.51
4827 5275 1.002502 GCTGGGGTTACCACAGTCC 60.003 63.158 31.28 14.71 46.80 3.85
4828 5276 1.683441 CTGGGGTTACCACAGTCCC 59.317 63.158 24.54 5.33 46.80 4.46
4829 5277 0.840722 CTGGGGTTACCACAGTCCCT 60.841 60.000 24.54 0.00 46.80 4.20
4830 5278 0.838987 TGGGGTTACCACAGTCCCTC 60.839 60.000 0.37 0.00 46.80 4.30
4831 5279 0.546988 GGGGTTACCACAGTCCCTCT 60.547 60.000 2.98 0.00 39.80 3.69
4832 5280 1.273438 GGGGTTACCACAGTCCCTCTA 60.273 57.143 2.98 0.00 39.80 2.43
4833 5281 2.543635 GGGTTACCACAGTCCCTCTAA 58.456 52.381 2.98 0.00 37.18 2.10
4834 5282 2.235650 GGGTTACCACAGTCCCTCTAAC 59.764 54.545 2.98 0.00 37.18 2.34
4835 5283 2.235650 GGTTACCACAGTCCCTCTAACC 59.764 54.545 0.00 0.00 0.00 2.85
4836 5284 2.901839 GTTACCACAGTCCCTCTAACCA 59.098 50.000 0.00 0.00 0.00 3.67
4837 5285 2.344093 ACCACAGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
4838 5286 2.188817 ACCACAGTCCCTCTAACCATC 58.811 52.381 0.00 0.00 0.00 3.51
4839 5287 1.486726 CCACAGTCCCTCTAACCATCC 59.513 57.143 0.00 0.00 0.00 3.51
4840 5288 2.187958 CACAGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
4841 5289 2.571653 CACAGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
4842 5290 2.572104 ACAGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
4843 5291 2.092914 CAGTCCCTCTAACCATCCAACC 60.093 54.545 0.00 0.00 0.00 3.77
4844 5292 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
4845 5293 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
4846 5294 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
4847 5295 2.356125 CCCTCTAACCATCCAACCACAG 60.356 54.545 0.00 0.00 0.00 3.66
4848 5296 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
4849 5297 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
4859 5307 3.655481 CCACAGGTTGGTTCGCTC 58.345 61.111 0.00 0.00 41.10 5.03
4860 5308 1.966451 CCACAGGTTGGTTCGCTCC 60.966 63.158 0.00 0.00 41.10 4.70
4861 5309 1.227823 CACAGGTTGGTTCGCTCCA 60.228 57.895 0.00 0.00 35.49 3.86
4862 5310 0.606401 CACAGGTTGGTTCGCTCCAT 60.606 55.000 0.00 0.00 37.33 3.41
4863 5311 0.110486 ACAGGTTGGTTCGCTCCATT 59.890 50.000 0.00 0.00 37.33 3.16
4864 5312 1.247567 CAGGTTGGTTCGCTCCATTT 58.752 50.000 0.00 0.00 37.33 2.32
4865 5313 1.613437 CAGGTTGGTTCGCTCCATTTT 59.387 47.619 0.00 0.00 37.33 1.82
4866 5314 2.817258 CAGGTTGGTTCGCTCCATTTTA 59.183 45.455 0.00 0.00 37.33 1.52
4867 5315 2.817844 AGGTTGGTTCGCTCCATTTTAC 59.182 45.455 0.00 0.00 37.33 2.01
4868 5316 2.554893 GGTTGGTTCGCTCCATTTTACA 59.445 45.455 0.00 0.00 37.33 2.41
4869 5317 3.004944 GGTTGGTTCGCTCCATTTTACAA 59.995 43.478 0.00 0.00 37.33 2.41
4870 5318 3.907894 TGGTTCGCTCCATTTTACAAC 57.092 42.857 0.00 0.00 31.96 3.32
4871 5319 3.482436 TGGTTCGCTCCATTTTACAACT 58.518 40.909 0.00 0.00 31.96 3.16
4872 5320 3.886505 TGGTTCGCTCCATTTTACAACTT 59.113 39.130 0.00 0.00 31.96 2.66
4873 5321 4.226761 GGTTCGCTCCATTTTACAACTTG 58.773 43.478 0.00 0.00 0.00 3.16
4874 5322 4.226761 GTTCGCTCCATTTTACAACTTGG 58.773 43.478 0.00 0.00 0.00 3.61
4875 5323 3.482436 TCGCTCCATTTTACAACTTGGT 58.518 40.909 0.00 0.00 0.00 3.67
4876 5324 3.886505 TCGCTCCATTTTACAACTTGGTT 59.113 39.130 0.00 0.00 0.00 3.67
4920 5368 8.487028 CCCATAATATAAGATGTTACTCCCTCC 58.513 40.741 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 6.629128 TGCAACTTCACTTTTCAGAAATTGA 58.371 32.000 0.00 0.32 34.02 2.57
37 38 5.640732 TGAGAAACTGCAACTTCACTTTTC 58.359 37.500 9.45 0.00 0.00 2.29
57 58 2.490328 TGGAAACTTGCGCTTTTGAG 57.510 45.000 9.73 1.29 0.00 3.02
134 135 4.937620 GCTTGATTATGTCTCAACCAGTCA 59.062 41.667 0.00 0.00 0.00 3.41
140 141 5.059833 CCCTAGGCTTGATTATGTCTCAAC 58.940 45.833 2.05 0.00 0.00 3.18
146 147 3.395607 TGCATCCCTAGGCTTGATTATGT 59.604 43.478 2.05 0.00 32.35 2.29
171 172 3.508402 TGCACTCTTTATGGACACGTCTA 59.492 43.478 0.00 0.00 0.00 2.59
179 180 5.378230 AAGATGGATGCACTCTTTATGGA 57.622 39.130 0.00 0.00 0.00 3.41
180 181 5.359009 ACAAAGATGGATGCACTCTTTATGG 59.641 40.000 17.56 11.73 37.17 2.74
232 277 1.278127 GAGGTGACGATTTCTTCCCCA 59.722 52.381 0.00 0.00 0.00 4.96
233 278 1.555533 AGAGGTGACGATTTCTTCCCC 59.444 52.381 0.00 0.00 0.00 4.81
234 279 4.674281 ATAGAGGTGACGATTTCTTCCC 57.326 45.455 0.00 0.00 0.00 3.97
237 282 6.879276 TCGATATAGAGGTGACGATTTCTT 57.121 37.500 0.00 0.00 0.00 2.52
244 289 5.864628 TTGAGATCGATATAGAGGTGACG 57.135 43.478 0.00 0.00 0.00 4.35
245 290 7.384439 TGATTGAGATCGATATAGAGGTGAC 57.616 40.000 0.00 0.00 34.91 3.67
256 301 7.914346 GCTCATTTCTTTTTGATTGAGATCGAT 59.086 33.333 0.00 0.00 37.43 3.59
265 310 4.871933 ACCGGCTCATTTCTTTTTGATT 57.128 36.364 0.00 0.00 0.00 2.57
269 314 4.871933 ATGAACCGGCTCATTTCTTTTT 57.128 36.364 14.68 0.00 31.84 1.94
271 316 5.192927 TCATATGAACCGGCTCATTTCTTT 58.807 37.500 24.55 3.67 37.27 2.52
275 320 5.913137 TTTTCATATGAACCGGCTCATTT 57.087 34.783 24.55 14.70 37.27 2.32
291 336 3.570550 TGGTTTTCGATCCGGTTTTTCAT 59.429 39.130 0.00 0.00 0.00 2.57
294 339 3.570550 TCATGGTTTTCGATCCGGTTTTT 59.429 39.130 0.00 0.00 0.00 1.94
303 348 5.418524 TGTGAATTGGATCATGGTTTTCGAT 59.581 36.000 0.00 0.00 0.00 3.59
399 447 0.392998 CGTGAGTGGGGGAATTCAGG 60.393 60.000 7.93 0.00 0.00 3.86
403 451 0.774908 TTTCCGTGAGTGGGGGAATT 59.225 50.000 0.00 0.00 39.43 2.17
406 454 2.232622 TTTTTCCGTGAGTGGGGGA 58.767 52.632 0.00 0.00 0.00 4.81
407 455 4.911901 TTTTTCCGTGAGTGGGGG 57.088 55.556 0.00 0.00 0.00 5.40
425 480 6.001460 TCTATGGGAGTCATTCGTTGTTTTT 58.999 36.000 0.00 0.00 37.30 1.94
432 487 6.918067 TGAATATCTATGGGAGTCATTCGT 57.082 37.500 0.00 0.00 37.30 3.85
433 488 8.037166 TGAATGAATATCTATGGGAGTCATTCG 58.963 37.037 19.66 0.00 43.86 3.34
440 495 7.524912 CGCTTTTGAATGAATATCTATGGGAG 58.475 38.462 0.00 0.00 0.00 4.30
481 540 1.138883 GACGTCAGCGATGCCTGTA 59.861 57.895 11.55 0.00 42.00 2.74
483 542 2.125952 TGACGTCAGCGATGCCTG 60.126 61.111 15.76 0.00 42.00 4.85
553 630 3.886694 GTGCCTGCGTTGTGTGCA 61.887 61.111 0.00 0.00 40.70 4.57
554 631 4.962122 CGTGCCTGCGTTGTGTGC 62.962 66.667 0.00 0.00 0.00 4.57
555 632 3.227372 CTCGTGCCTGCGTTGTGTG 62.227 63.158 0.00 0.00 0.00 3.82
556 633 2.916502 TTCTCGTGCCTGCGTTGTGT 62.917 55.000 0.00 0.00 0.00 3.72
559 636 1.205064 CTTTCTCGTGCCTGCGTTG 59.795 57.895 0.00 0.00 0.00 4.10
560 637 1.961277 CCTTTCTCGTGCCTGCGTT 60.961 57.895 0.00 0.00 0.00 4.84
561 638 2.357517 CCTTTCTCGTGCCTGCGT 60.358 61.111 0.00 0.00 0.00 5.24
562 639 1.630244 CTTCCTTTCTCGTGCCTGCG 61.630 60.000 0.00 0.00 0.00 5.18
563 640 0.320771 TCTTCCTTTCTCGTGCCTGC 60.321 55.000 0.00 0.00 0.00 4.85
564 641 1.273606 TCTCTTCCTTTCTCGTGCCTG 59.726 52.381 0.00 0.00 0.00 4.85
565 642 1.548269 CTCTCTTCCTTTCTCGTGCCT 59.452 52.381 0.00 0.00 0.00 4.75
567 644 2.029828 TGTCTCTCTTCCTTTCTCGTGC 60.030 50.000 0.00 0.00 0.00 5.34
568 645 3.924918 TGTCTCTCTTCCTTTCTCGTG 57.075 47.619 0.00 0.00 0.00 4.35
569 646 4.380023 CGATTGTCTCTCTTCCTTTCTCGT 60.380 45.833 0.00 0.00 0.00 4.18
570 647 4.101942 CGATTGTCTCTCTTCCTTTCTCG 58.898 47.826 0.00 0.00 0.00 4.04
575 667 2.900546 ACCACGATTGTCTCTCTTCCTT 59.099 45.455 0.00 0.00 0.00 3.36
578 670 2.989840 CACACCACGATTGTCTCTCTTC 59.010 50.000 0.00 0.00 0.00 2.87
579 671 2.868044 GCACACCACGATTGTCTCTCTT 60.868 50.000 0.00 0.00 0.00 2.85
608 700 1.203523 CTCTCGAGTGGAAACAGGAGG 59.796 57.143 13.13 0.00 44.46 4.30
609 701 2.163509 TCTCTCGAGTGGAAACAGGAG 58.836 52.381 13.13 0.00 44.46 3.69
743 847 4.554036 GATGGAGGCGAGGTGGGC 62.554 72.222 0.00 0.00 0.00 5.36
744 848 4.227134 CGATGGAGGCGAGGTGGG 62.227 72.222 0.00 0.00 0.00 4.61
746 850 4.899239 GGCGATGGAGGCGAGGTG 62.899 72.222 0.00 0.00 0.00 4.00
749 853 3.206211 GAGAGGCGATGGAGGCGAG 62.206 68.421 0.00 0.00 41.99 5.03
750 854 3.219928 GAGAGGCGATGGAGGCGA 61.220 66.667 0.00 0.00 41.99 5.54
751 855 4.292178 GGAGAGGCGATGGAGGCG 62.292 72.222 0.00 0.00 41.99 5.52
752 856 4.292178 CGGAGAGGCGATGGAGGC 62.292 72.222 0.00 0.00 0.00 4.70
866 972 3.917760 GACGGAGATGGGGCGAGG 61.918 72.222 0.00 0.00 0.00 4.63
898 1004 2.876219 GAGGTGACGGAGGTCGAC 59.124 66.667 7.13 7.13 46.49 4.20
908 1034 2.494918 CCCGATGGTCGAGGTGAC 59.505 66.667 0.22 0.00 43.74 3.67
988 1119 2.194326 GCCCATTCCCTCCTCTGC 59.806 66.667 0.00 0.00 0.00 4.26
989 1120 2.370445 ACGCCCATTCCCTCCTCTG 61.370 63.158 0.00 0.00 0.00 3.35
990 1121 2.041265 ACGCCCATTCCCTCCTCT 59.959 61.111 0.00 0.00 0.00 3.69
1093 1231 2.186644 CATGTCCATGCCGTCGGA 59.813 61.111 17.49 0.00 31.39 4.55
1187 1325 0.183014 TGGACGGAGGAGCTAGGTAG 59.817 60.000 0.00 0.00 0.00 3.18
1271 1413 4.868171 GCTTGGGAATATAATGCATGCATG 59.132 41.667 32.79 22.70 36.68 4.06
1272 1414 4.528987 TGCTTGGGAATATAATGCATGCAT 59.471 37.500 27.46 27.46 38.46 3.96
1290 1432 3.499537 TGTGTGCACTTTCTAGATGCTTG 59.500 43.478 19.41 3.31 40.13 4.01
1303 1445 1.150827 CGTGATGATGTGTGTGCACT 58.849 50.000 19.41 0.00 45.44 4.40
1389 1540 8.604640 AGTAAAAGAAGCTCACCTAAAACTAC 57.395 34.615 0.00 0.00 0.00 2.73
1396 1547 8.874744 TCTTAGTAGTAAAAGAAGCTCACCTA 57.125 34.615 0.00 0.00 0.00 3.08
1416 1567 6.918626 TCCTCGATGCTCTAATGATTCTTAG 58.081 40.000 0.00 0.00 0.00 2.18
1417 1568 6.901081 TCCTCGATGCTCTAATGATTCTTA 57.099 37.500 0.00 0.00 0.00 2.10
1418 1569 5.798125 TCCTCGATGCTCTAATGATTCTT 57.202 39.130 0.00 0.00 0.00 2.52
1419 1570 5.798125 TTCCTCGATGCTCTAATGATTCT 57.202 39.130 0.00 0.00 0.00 2.40
1420 1571 6.162079 TGATTCCTCGATGCTCTAATGATTC 58.838 40.000 0.00 0.00 0.00 2.52
1465 1616 2.234300 ACTACTTGACCCAACACACG 57.766 50.000 0.00 0.00 0.00 4.49
1537 1694 2.162408 GGAAAACATGGAGAAAGAGCGG 59.838 50.000 0.00 0.00 0.00 5.52
1645 1806 4.142337 GGAGAAGGAAGCTATATAGACCGC 60.142 50.000 14.16 10.06 0.00 5.68
1681 1842 7.302350 ACTTTTTGAATTCTTTTTCCAACGG 57.698 32.000 7.05 0.00 0.00 4.44
1722 1883 7.661536 ACATACTCCGGAAGCACATATATAT 57.338 36.000 5.23 0.00 0.00 0.86
1723 1884 7.476540 AACATACTCCGGAAGCACATATATA 57.523 36.000 5.23 0.00 0.00 0.86
1724 1885 6.360370 AACATACTCCGGAAGCACATATAT 57.640 37.500 5.23 0.00 0.00 0.86
1725 1886 5.801531 AACATACTCCGGAAGCACATATA 57.198 39.130 5.23 0.00 0.00 0.86
1852 2023 6.716934 ATCATGTACTCTGGTCGTTAATCT 57.283 37.500 0.00 0.00 0.00 2.40
1853 2024 7.772332 AAATCATGTACTCTGGTCGTTAATC 57.228 36.000 0.00 0.00 0.00 1.75
1930 2102 9.463443 GAATTAATTAATCCAATACACTGGCAC 57.537 33.333 11.08 0.00 36.32 5.01
2025 2214 1.338105 CCACAGAGTCCGCAGATGAAA 60.338 52.381 0.00 0.00 0.00 2.69
2029 2218 0.324368 TACCCACAGAGTCCGCAGAT 60.324 55.000 0.00 0.00 0.00 2.90
2096 2304 2.552315 CGTGGGAAGTGCAGTAAAATGT 59.448 45.455 0.00 0.00 0.00 2.71
2098 2306 2.812011 GTCGTGGGAAGTGCAGTAAAAT 59.188 45.455 0.00 0.00 0.00 1.82
2178 2397 1.371512 CATTGCAAAAGCGGCGTCA 60.372 52.632 9.37 0.00 0.00 4.35
2211 2431 4.212847 CCTAGCTAGCTACATGCATGTTTG 59.787 45.833 35.45 27.08 45.94 2.93
2212 2432 4.384056 CCTAGCTAGCTACATGCATGTTT 58.616 43.478 35.45 22.88 45.94 2.83
2214 2434 2.301296 CCCTAGCTAGCTACATGCATGT 59.699 50.000 33.20 33.20 45.94 3.21
2216 2436 1.905215 CCCCTAGCTAGCTACATGCAT 59.095 52.381 20.67 0.00 45.94 3.96
2217 2437 1.342074 CCCCTAGCTAGCTACATGCA 58.658 55.000 20.67 1.02 45.94 3.96
2218 2438 0.610687 CCCCCTAGCTAGCTACATGC 59.389 60.000 20.67 0.00 43.29 4.06
2219 2439 0.610687 GCCCCCTAGCTAGCTACATG 59.389 60.000 20.67 11.09 0.00 3.21
2220 2440 0.489567 AGCCCCCTAGCTAGCTACAT 59.510 55.000 20.67 0.00 42.70 2.29
2221 2441 0.178958 GAGCCCCCTAGCTAGCTACA 60.179 60.000 20.67 3.45 45.15 2.74
2255 2589 2.034124 CCTTGCATTGGGAGGGTATTG 58.966 52.381 0.00 0.00 0.00 1.90
2364 2702 2.233271 ACATCAAGTGGTTGGAAGCAG 58.767 47.619 0.00 0.00 37.04 4.24
2411 2760 2.495409 CCATCGGGTCGGAATCGGA 61.495 63.158 2.28 0.00 36.95 4.55
2412 2761 2.023414 TTCCATCGGGTCGGAATCGG 62.023 60.000 0.00 0.00 36.36 4.18
2413 2762 0.033504 ATTCCATCGGGTCGGAATCG 59.966 55.000 0.00 0.00 46.81 3.34
2416 2765 0.689745 AGGATTCCATCGGGTCGGAA 60.690 55.000 5.29 0.00 45.12 4.30
2435 2784 5.723672 ACTAATATAAAGCTAGCGGCAGA 57.276 39.130 9.55 0.00 44.79 4.26
2452 2801 4.141733 ACTTTGTTTGGCAGGCAAACTAAT 60.142 37.500 38.00 26.49 41.58 1.73
2478 2827 1.198637 GACGTACGTGGAGCTTGTACT 59.801 52.381 28.16 0.00 37.04 2.73
2479 2828 1.198637 AGACGTACGTGGAGCTTGTAC 59.801 52.381 28.16 6.98 36.09 2.90
2485 2834 2.728368 GTACTAGACGTACGTGGAGC 57.272 55.000 28.16 11.42 39.15 4.70
2499 2848 5.537295 TGTAAAGTGAGTGGAGCTTGTACTA 59.463 40.000 0.00 0.00 0.00 1.82
2502 2851 4.948341 TGTAAAGTGAGTGGAGCTTGTA 57.052 40.909 0.00 0.00 0.00 2.41
2503 2852 3.838244 TGTAAAGTGAGTGGAGCTTGT 57.162 42.857 0.00 0.00 0.00 3.16
2504 2853 4.261197 GGTTTGTAAAGTGAGTGGAGCTTG 60.261 45.833 0.00 0.00 0.00 4.01
2505 2854 3.883489 GGTTTGTAAAGTGAGTGGAGCTT 59.117 43.478 0.00 0.00 0.00 3.74
2506 2855 3.477530 GGTTTGTAAAGTGAGTGGAGCT 58.522 45.455 0.00 0.00 0.00 4.09
2507 2856 2.223377 CGGTTTGTAAAGTGAGTGGAGC 59.777 50.000 0.00 0.00 0.00 4.70
2508 2857 3.247648 CACGGTTTGTAAAGTGAGTGGAG 59.752 47.826 0.00 0.00 36.79 3.86
2535 2884 3.324846 TGATGTTCACAGACCAGTAGCTT 59.675 43.478 0.00 0.00 0.00 3.74
2543 2892 2.093973 AGGACGATGATGTTCACAGACC 60.094 50.000 0.00 0.00 0.00 3.85
2622 2973 2.475187 GCAATTGTAAGCAGTCGAGCAG 60.475 50.000 7.40 0.00 36.85 4.24
2628 2979 1.804151 TCGGTGCAATTGTAAGCAGTC 59.196 47.619 7.40 0.00 42.14 3.51
2662 3016 2.167219 CGTGGCTGCATGTAGACCG 61.167 63.158 14.69 12.97 0.00 4.79
2798 3163 1.002134 ATGGCCACCGAGACAAAGG 60.002 57.895 8.16 0.00 0.00 3.11
2799 3164 1.926511 GCATGGCCACCGAGACAAAG 61.927 60.000 8.16 0.00 0.00 2.77
2800 3165 1.971167 GCATGGCCACCGAGACAAA 60.971 57.895 8.16 0.00 0.00 2.83
2801 3166 2.359850 GCATGGCCACCGAGACAA 60.360 61.111 8.16 0.00 0.00 3.18
2802 3167 2.874648 GATGCATGGCCACCGAGACA 62.875 60.000 8.16 0.00 0.00 3.41
2803 3168 2.124570 ATGCATGGCCACCGAGAC 60.125 61.111 8.16 0.00 0.00 3.36
2804 3169 2.190313 GATGCATGGCCACCGAGA 59.810 61.111 8.16 0.00 0.00 4.04
2809 3174 2.813179 GACGACGATGCATGGCCAC 61.813 63.158 8.16 0.00 0.00 5.01
2883 3248 8.613922 ACATACACCATAGATGATCCATATCA 57.386 34.615 0.00 0.00 46.01 2.15
2886 3251 7.614192 ACGTACATACACCATAGATGATCCATA 59.386 37.037 0.00 0.00 0.00 2.74
2888 3253 5.773176 ACGTACATACACCATAGATGATCCA 59.227 40.000 0.00 0.00 0.00 3.41
2891 3256 6.071896 CCTGACGTACATACACCATAGATGAT 60.072 42.308 0.00 0.00 0.00 2.45
2893 3258 5.009710 ACCTGACGTACATACACCATAGATG 59.990 44.000 0.00 0.00 0.00 2.90
2896 3261 4.913335 ACCTGACGTACATACACCATAG 57.087 45.455 0.00 0.00 0.00 2.23
2947 3330 2.053627 GCTGGCAATGTGAAGAAAACG 58.946 47.619 0.00 0.00 0.00 3.60
2948 3331 3.375782 AGCTGGCAATGTGAAGAAAAC 57.624 42.857 0.00 0.00 0.00 2.43
2949 3332 3.384146 TGAAGCTGGCAATGTGAAGAAAA 59.616 39.130 0.00 0.00 0.00 2.29
2953 3336 2.477357 CGATGAAGCTGGCAATGTGAAG 60.477 50.000 0.00 0.00 0.00 3.02
2958 3350 1.065273 GGCGATGAAGCTGGCAATG 59.935 57.895 0.00 0.00 37.29 2.82
2990 3405 1.960040 CTAGGGACGTGCAGCATGGA 61.960 60.000 19.05 0.00 35.86 3.41
2994 3409 1.667154 CTAGCTAGGGACGTGCAGCA 61.667 60.000 19.08 0.00 36.47 4.41
2996 3411 1.323412 ATCTAGCTAGGGACGTGCAG 58.677 55.000 20.58 0.00 34.34 4.41
3010 3425 7.429633 CCATTAATGGCGGAGTCTATATCTAG 58.570 42.308 21.32 0.00 41.75 2.43
3064 3483 4.997905 ACACGTGTCAATCTTCTTCATG 57.002 40.909 17.22 0.00 0.00 3.07
3097 3516 2.716828 CCGCACGATGACACACGTC 61.717 63.158 6.55 0.00 40.76 4.34
3098 3517 2.733218 CCGCACGATGACACACGT 60.733 61.111 4.09 4.09 43.50 4.49
3099 3518 4.134187 GCCGCACGATGACACACG 62.134 66.667 0.00 2.94 0.00 4.49
3100 3519 1.445410 TAGCCGCACGATGACACAC 60.445 57.895 0.00 0.00 0.00 3.82
3101 3520 1.445410 GTAGCCGCACGATGACACA 60.445 57.895 0.00 0.00 0.00 3.72
3102 3521 2.165301 GGTAGCCGCACGATGACAC 61.165 63.158 0.00 0.00 0.00 3.67
3103 3522 2.183300 GGTAGCCGCACGATGACA 59.817 61.111 0.00 0.00 0.00 3.58
3104 3523 2.954868 CGGTAGCCGCACGATGAC 60.955 66.667 0.00 0.00 41.17 3.06
3128 3550 8.797215 TCACACGTATACATATTTTTGTCGTAC 58.203 33.333 3.32 0.00 29.76 3.67
3142 3567 4.024641 AGCGTAATCGATCACACGTATACA 60.025 41.667 20.99 0.00 39.71 2.29
3164 3590 5.823209 TGTCATATCAACATTCAAGGCAG 57.177 39.130 0.00 0.00 0.00 4.85
3168 3594 8.642908 AATGCAATGTCATATCAACATTCAAG 57.357 30.769 9.16 2.69 43.62 3.02
3508 3947 1.224592 CTGGGCGCCCTTGTAGAAT 59.775 57.895 43.34 0.00 36.94 2.40
3541 3980 1.000896 GAGGTTGATGTGGGTGGGG 60.001 63.158 0.00 0.00 0.00 4.96
3592 4031 2.892425 GAGGAGGCGGCATGTTCG 60.892 66.667 13.08 6.29 0.00 3.95
3602 4041 3.787001 CGGGTGAAGGGAGGAGGC 61.787 72.222 0.00 0.00 0.00 4.70
4018 4457 1.443702 CGTCACGATGAGAACGGCA 60.444 57.895 0.00 0.00 34.93 5.69
4045 4484 1.073284 CCTTTTCCCCAGAGAACGGAA 59.927 52.381 0.00 0.00 33.83 4.30
4051 4490 3.077907 CGGCCTTTTCCCCAGAGA 58.922 61.111 0.00 0.00 0.00 3.10
4557 5005 6.561737 TTGTGTCTGTACTGTGTTCAAAAA 57.438 33.333 0.00 0.00 0.00 1.94
4558 5006 5.391523 GCTTGTGTCTGTACTGTGTTCAAAA 60.392 40.000 0.00 0.00 0.00 2.44
4559 5007 4.094294 GCTTGTGTCTGTACTGTGTTCAAA 59.906 41.667 0.00 0.00 0.00 2.69
4560 5008 3.621268 GCTTGTGTCTGTACTGTGTTCAA 59.379 43.478 0.00 0.00 0.00 2.69
4561 5009 3.194861 GCTTGTGTCTGTACTGTGTTCA 58.805 45.455 0.00 0.00 0.00 3.18
4562 5010 2.218759 CGCTTGTGTCTGTACTGTGTTC 59.781 50.000 0.00 0.00 0.00 3.18
4563 5011 2.201732 CGCTTGTGTCTGTACTGTGTT 58.798 47.619 0.00 0.00 0.00 3.32
4564 5012 1.852942 CGCTTGTGTCTGTACTGTGT 58.147 50.000 0.00 0.00 0.00 3.72
4565 5013 0.508641 GCGCTTGTGTCTGTACTGTG 59.491 55.000 0.00 0.00 0.00 3.66
4566 5014 0.389391 AGCGCTTGTGTCTGTACTGT 59.611 50.000 2.64 0.00 0.00 3.55
4567 5015 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
4568 5016 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
4569 5017 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
4570 5018 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
4571 5019 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
4572 5020 2.469147 CGTATATGAGCGCTTGTGTCTG 59.531 50.000 13.26 0.00 0.00 3.51
4573 5021 2.732366 CGTATATGAGCGCTTGTGTCT 58.268 47.619 13.26 0.00 0.00 3.41
4582 5030 1.317611 GTATGCGTGCGTATATGAGCG 59.682 52.381 5.76 0.47 35.87 5.03
4583 5031 2.090658 GTGTATGCGTGCGTATATGAGC 59.909 50.000 5.76 0.00 0.00 4.26
4584 5032 3.565516 AGTGTATGCGTGCGTATATGAG 58.434 45.455 5.76 0.00 0.00 2.90
4585 5033 3.003897 TGAGTGTATGCGTGCGTATATGA 59.996 43.478 5.76 0.00 0.00 2.15
4586 5034 3.119628 GTGAGTGTATGCGTGCGTATATG 59.880 47.826 5.76 0.00 0.00 1.78
4587 5035 3.305964 GTGAGTGTATGCGTGCGTATAT 58.694 45.455 5.76 0.00 0.00 0.86
4588 5036 2.542205 GGTGAGTGTATGCGTGCGTATA 60.542 50.000 0.00 0.00 0.00 1.47
4589 5037 1.556564 GTGAGTGTATGCGTGCGTAT 58.443 50.000 0.00 0.50 0.00 3.06
4590 5038 0.457166 GGTGAGTGTATGCGTGCGTA 60.457 55.000 0.00 0.00 0.00 4.42
4591 5039 1.736645 GGTGAGTGTATGCGTGCGT 60.737 57.895 0.00 0.00 0.00 5.24
4592 5040 2.452813 GGGTGAGTGTATGCGTGCG 61.453 63.158 0.00 0.00 0.00 5.34
4593 5041 2.106683 GGGGTGAGTGTATGCGTGC 61.107 63.158 0.00 0.00 0.00 5.34
4594 5042 0.821517 TAGGGGTGAGTGTATGCGTG 59.178 55.000 0.00 0.00 0.00 5.34
4595 5043 1.412710 CATAGGGGTGAGTGTATGCGT 59.587 52.381 0.00 0.00 0.00 5.24
4596 5044 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
4597 5045 3.838244 TTCATAGGGGTGAGTGTATGC 57.162 47.619 0.00 0.00 0.00 3.14
4598 5046 4.130118 GCTTTCATAGGGGTGAGTGTATG 58.870 47.826 0.00 0.00 0.00 2.39
4599 5047 3.780294 TGCTTTCATAGGGGTGAGTGTAT 59.220 43.478 0.00 0.00 0.00 2.29
4600 5048 3.055385 GTGCTTTCATAGGGGTGAGTGTA 60.055 47.826 0.00 0.00 0.00 2.90
4601 5049 1.985159 TGCTTTCATAGGGGTGAGTGT 59.015 47.619 0.00 0.00 0.00 3.55
4602 5050 2.290260 TGTGCTTTCATAGGGGTGAGTG 60.290 50.000 0.00 0.00 0.00 3.51
4603 5051 1.985159 TGTGCTTTCATAGGGGTGAGT 59.015 47.619 0.00 0.00 0.00 3.41
4604 5052 2.290260 TGTGTGCTTTCATAGGGGTGAG 60.290 50.000 0.00 0.00 0.00 3.51
4605 5053 1.702401 TGTGTGCTTTCATAGGGGTGA 59.298 47.619 0.00 0.00 0.00 4.02
4606 5054 2.086869 CTGTGTGCTTTCATAGGGGTG 58.913 52.381 0.00 0.00 0.00 4.61
4607 5055 1.004745 CCTGTGTGCTTTCATAGGGGT 59.995 52.381 10.29 0.00 41.12 4.95
4608 5056 1.755179 CCTGTGTGCTTTCATAGGGG 58.245 55.000 10.29 0.00 41.12 4.79
4609 5057 1.098050 GCCTGTGTGCTTTCATAGGG 58.902 55.000 16.34 0.00 43.69 3.53
4610 5058 1.470098 GTGCCTGTGTGCTTTCATAGG 59.530 52.381 12.60 12.60 45.40 2.57
4611 5059 2.095567 GTGTGCCTGTGTGCTTTCATAG 60.096 50.000 0.00 0.00 0.00 2.23
4612 5060 1.879380 GTGTGCCTGTGTGCTTTCATA 59.121 47.619 0.00 0.00 0.00 2.15
4613 5061 0.670162 GTGTGCCTGTGTGCTTTCAT 59.330 50.000 0.00 0.00 0.00 2.57
4614 5062 1.383456 GGTGTGCCTGTGTGCTTTCA 61.383 55.000 0.00 0.00 0.00 2.69
4615 5063 1.360192 GGTGTGCCTGTGTGCTTTC 59.640 57.895 0.00 0.00 0.00 2.62
4616 5064 2.127232 GGGTGTGCCTGTGTGCTTT 61.127 57.895 0.00 0.00 34.45 3.51
4617 5065 1.705002 TAGGGTGTGCCTGTGTGCTT 61.705 55.000 0.00 0.00 34.45 3.91
4618 5066 2.146724 TAGGGTGTGCCTGTGTGCT 61.147 57.895 0.00 0.00 34.45 4.40
4619 5067 1.966451 GTAGGGTGTGCCTGTGTGC 60.966 63.158 0.00 0.00 34.45 4.57
4620 5068 1.302511 GGTAGGGTGTGCCTGTGTG 60.303 63.158 0.00 0.00 34.45 3.82
4621 5069 2.526046 GGGTAGGGTGTGCCTGTGT 61.526 63.158 0.00 0.00 34.45 3.72
4622 5070 2.351276 GGGTAGGGTGTGCCTGTG 59.649 66.667 0.00 0.00 34.45 3.66
4623 5071 2.114657 TAGGGGTAGGGTGTGCCTGT 62.115 60.000 0.00 0.00 34.45 4.00
4624 5072 0.694444 ATAGGGGTAGGGTGTGCCTG 60.694 60.000 0.00 0.00 34.45 4.85
4625 5073 0.694444 CATAGGGGTAGGGTGTGCCT 60.694 60.000 0.00 0.00 34.45 4.75
4626 5074 0.693092 TCATAGGGGTAGGGTGTGCC 60.693 60.000 0.00 0.00 0.00 5.01
4627 5075 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
4628 5076 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
4629 5077 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
4630 5078 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
4631 5079 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
4632 5080 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
4633 5081 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
4634 5082 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
4635 5083 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
4636 5084 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
4637 5085 1.048724 TTCGGAGGTGCTCATAGGGG 61.049 60.000 0.00 0.00 31.08 4.79
4638 5086 0.830648 TTTCGGAGGTGCTCATAGGG 59.169 55.000 0.00 0.00 31.08 3.53
4639 5087 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
4640 5088 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
4641 5089 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
4642 5090 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
4643 5091 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
4644 5092 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
4645 5093 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
4646 5094 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
4647 5095 0.390472 GGCTCAGTCTTTCGGAGGTG 60.390 60.000 0.00 0.00 38.48 4.00
4648 5096 1.878656 CGGCTCAGTCTTTCGGAGGT 61.879 60.000 0.00 0.00 38.48 3.85
4649 5097 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
4650 5098 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
4651 5099 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
4652 5100 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
4653 5101 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
4654 5102 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
4655 5103 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
4656 5104 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
4657 5105 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
4658 5106 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
4659 5107 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
4660 5108 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
4661 5109 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
4662 5110 2.462456 TCAAGATGATATGCCGGCTC 57.538 50.000 29.70 17.89 0.00 4.70
4663 5111 2.936919 TTCAAGATGATATGCCGGCT 57.063 45.000 29.70 15.76 0.00 5.52
4664 5112 4.510038 AATTTCAAGATGATATGCCGGC 57.490 40.909 22.73 22.73 0.00 6.13
4665 5113 6.073276 TCGTAAATTTCAAGATGATATGCCGG 60.073 38.462 0.00 0.00 0.00 6.13
4666 5114 6.887368 TCGTAAATTTCAAGATGATATGCCG 58.113 36.000 0.00 0.00 0.00 5.69
4667 5115 7.041098 ACCTCGTAAATTTCAAGATGATATGCC 60.041 37.037 0.00 0.00 0.00 4.40
4668 5116 7.865707 ACCTCGTAAATTTCAAGATGATATGC 58.134 34.615 0.00 0.00 0.00 3.14
4669 5117 9.045223 TGACCTCGTAAATTTCAAGATGATATG 57.955 33.333 0.00 0.00 0.00 1.78
4670 5118 9.046296 GTGACCTCGTAAATTTCAAGATGATAT 57.954 33.333 0.00 0.00 0.00 1.63
4671 5119 7.494625 GGTGACCTCGTAAATTTCAAGATGATA 59.505 37.037 0.00 0.00 0.00 2.15
4672 5120 6.316390 GGTGACCTCGTAAATTTCAAGATGAT 59.684 38.462 0.00 0.00 0.00 2.45
4673 5121 5.642063 GGTGACCTCGTAAATTTCAAGATGA 59.358 40.000 0.00 0.00 0.00 2.92
4674 5122 5.445939 CGGTGACCTCGTAAATTTCAAGATG 60.446 44.000 0.00 0.00 0.00 2.90
4675 5123 4.630069 CGGTGACCTCGTAAATTTCAAGAT 59.370 41.667 0.00 0.00 0.00 2.40
4676 5124 3.991773 CGGTGACCTCGTAAATTTCAAGA 59.008 43.478 0.00 0.00 0.00 3.02
4677 5125 3.744426 ACGGTGACCTCGTAAATTTCAAG 59.256 43.478 0.00 0.00 39.22 3.02
4678 5126 3.731089 ACGGTGACCTCGTAAATTTCAA 58.269 40.909 0.00 0.00 39.22 2.69
4679 5127 3.389925 ACGGTGACCTCGTAAATTTCA 57.610 42.857 0.00 0.00 39.22 2.69
4680 5128 3.861689 CCTACGGTGACCTCGTAAATTTC 59.138 47.826 0.00 0.00 41.62 2.17
4681 5129 3.853475 CCTACGGTGACCTCGTAAATTT 58.147 45.455 0.00 0.00 41.62 1.82
4682 5130 2.417787 GCCTACGGTGACCTCGTAAATT 60.418 50.000 0.00 0.00 41.62 1.82
4683 5131 1.135721 GCCTACGGTGACCTCGTAAAT 59.864 52.381 0.00 0.00 41.62 1.40
4684 5132 0.527565 GCCTACGGTGACCTCGTAAA 59.472 55.000 0.00 0.00 41.62 2.01
4685 5133 0.608856 TGCCTACGGTGACCTCGTAA 60.609 55.000 0.00 0.00 41.62 3.18
4686 5134 1.002257 TGCCTACGGTGACCTCGTA 60.002 57.895 0.00 0.00 41.38 3.43
4687 5135 2.282674 TGCCTACGGTGACCTCGT 60.283 61.111 0.00 0.00 43.64 4.18
4688 5136 2.181021 GTGCCTACGGTGACCTCG 59.819 66.667 0.00 0.00 0.00 4.63
4689 5137 1.946475 GAGGTGCCTACGGTGACCTC 61.946 65.000 13.81 13.81 42.67 3.85
4690 5138 1.982938 GAGGTGCCTACGGTGACCT 60.983 63.158 0.00 0.00 39.35 3.85
4691 5139 1.614241 ATGAGGTGCCTACGGTGACC 61.614 60.000 0.00 0.00 0.00 4.02
4692 5140 0.179108 GATGAGGTGCCTACGGTGAC 60.179 60.000 0.00 0.00 0.00 3.67
4693 5141 1.663379 CGATGAGGTGCCTACGGTGA 61.663 60.000 0.00 0.00 0.00 4.02
4694 5142 1.226974 CGATGAGGTGCCTACGGTG 60.227 63.158 0.00 0.00 0.00 4.94
4695 5143 1.664321 GACGATGAGGTGCCTACGGT 61.664 60.000 13.25 0.00 0.00 4.83
4696 5144 1.065928 GACGATGAGGTGCCTACGG 59.934 63.158 13.25 0.00 0.00 4.02
4697 5145 1.298413 CGACGATGAGGTGCCTACG 60.298 63.158 0.00 9.22 0.00 3.51
4698 5146 0.248539 GTCGACGATGAGGTGCCTAC 60.249 60.000 0.00 0.00 0.00 3.18
4699 5147 1.712018 CGTCGACGATGAGGTGCCTA 61.712 60.000 33.35 0.00 43.02 3.93
4700 5148 2.885861 GTCGACGATGAGGTGCCT 59.114 61.111 0.00 0.00 0.00 4.75
4701 5149 2.579787 CGTCGACGATGAGGTGCC 60.580 66.667 33.35 0.00 43.02 5.01
4702 5150 2.579787 CCGTCGACGATGAGGTGC 60.580 66.667 37.65 0.00 43.02 5.01
4703 5151 1.929806 TTCCCGTCGACGATGAGGTG 61.930 60.000 37.65 19.12 43.02 4.00
4704 5152 1.676635 TTCCCGTCGACGATGAGGT 60.677 57.895 37.65 0.00 43.02 3.85
4705 5153 1.226603 GTTCCCGTCGACGATGAGG 60.227 63.158 37.65 28.37 43.02 3.86
4706 5154 1.582937 CGTTCCCGTCGACGATGAG 60.583 63.158 37.65 20.95 41.53 2.90
4707 5155 2.327343 ACGTTCCCGTCGACGATGA 61.327 57.895 37.65 28.41 46.28 2.92
4708 5156 2.177531 ACGTTCCCGTCGACGATG 59.822 61.111 37.65 26.71 46.28 3.84
4720 5168 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
4721 5169 1.276421 CATTCAGTGGGAGGAGACGTT 59.724 52.381 0.00 0.00 0.00 3.99
4722 5170 0.898320 CATTCAGTGGGAGGAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
4723 5171 0.460987 GCATTCAGTGGGAGGAGACG 60.461 60.000 0.00 0.00 0.00 4.18
4724 5172 0.460987 CGCATTCAGTGGGAGGAGAC 60.461 60.000 0.00 0.00 43.02 3.36
4725 5173 0.904865 ACGCATTCAGTGGGAGGAGA 60.905 55.000 0.00 0.00 43.02 3.71
4726 5174 0.824109 TACGCATTCAGTGGGAGGAG 59.176 55.000 0.00 0.00 43.02 3.69
4727 5175 1.412710 GATACGCATTCAGTGGGAGGA 59.587 52.381 0.00 0.00 43.02 3.71
4728 5176 1.869754 CGATACGCATTCAGTGGGAGG 60.870 57.143 0.00 0.00 43.02 4.30
4729 5177 1.491670 CGATACGCATTCAGTGGGAG 58.508 55.000 0.00 0.00 43.02 4.30
4730 5178 3.659850 CGATACGCATTCAGTGGGA 57.340 52.632 0.00 0.00 43.02 4.37
4742 5190 0.031585 TCAGGATTTCCGGCGATACG 59.968 55.000 9.30 0.00 42.08 3.06
4743 5191 2.234300 TTCAGGATTTCCGGCGATAC 57.766 50.000 9.30 0.00 42.08 2.24
4744 5192 2.992124 TTTCAGGATTTCCGGCGATA 57.008 45.000 9.30 0.00 42.08 2.92
4745 5193 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
4746 5194 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
4747 5195 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
4748 5196 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
4749 5197 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
4757 5205 7.596248 CGCATTTATTCCTGGATTTATTTCAGG 59.404 37.037 0.00 0.00 46.91 3.86
4758 5206 8.352201 TCGCATTTATTCCTGGATTTATTTCAG 58.648 33.333 0.00 0.00 0.00 3.02
4759 5207 8.231692 TCGCATTTATTCCTGGATTTATTTCA 57.768 30.769 0.00 0.00 0.00 2.69
4760 5208 7.327032 GCTCGCATTTATTCCTGGATTTATTTC 59.673 37.037 0.00 0.00 0.00 2.17
4761 5209 7.147976 GCTCGCATTTATTCCTGGATTTATTT 58.852 34.615 0.00 0.00 0.00 1.40
4762 5210 6.265196 TGCTCGCATTTATTCCTGGATTTATT 59.735 34.615 0.00 0.00 0.00 1.40
4763 5211 5.769662 TGCTCGCATTTATTCCTGGATTTAT 59.230 36.000 0.00 0.00 0.00 1.40
4764 5212 5.008613 GTGCTCGCATTTATTCCTGGATTTA 59.991 40.000 0.00 0.00 0.00 1.40
4765 5213 3.953612 TGCTCGCATTTATTCCTGGATTT 59.046 39.130 0.00 0.00 0.00 2.17
4766 5214 3.316308 GTGCTCGCATTTATTCCTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
4767 5215 2.880890 GTGCTCGCATTTATTCCTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
4768 5216 2.288666 GTGCTCGCATTTATTCCTGGA 58.711 47.619 0.00 0.00 0.00 3.86
4769 5217 1.334869 GGTGCTCGCATTTATTCCTGG 59.665 52.381 0.00 0.00 0.00 4.45
4770 5218 2.016318 TGGTGCTCGCATTTATTCCTG 58.984 47.619 0.00 0.00 0.00 3.86
4771 5219 2.292267 CTGGTGCTCGCATTTATTCCT 58.708 47.619 0.00 0.00 0.00 3.36
4772 5220 1.334869 CCTGGTGCTCGCATTTATTCC 59.665 52.381 0.00 0.00 0.00 3.01
4773 5221 2.288666 TCCTGGTGCTCGCATTTATTC 58.711 47.619 0.00 0.00 0.00 1.75
4774 5222 2.418368 TCCTGGTGCTCGCATTTATT 57.582 45.000 0.00 0.00 0.00 1.40
4775 5223 2.645838 ATCCTGGTGCTCGCATTTAT 57.354 45.000 0.00 0.00 0.00 1.40
4776 5224 2.418368 AATCCTGGTGCTCGCATTTA 57.582 45.000 0.00 0.00 0.00 1.40
4777 5225 1.203052 CAAATCCTGGTGCTCGCATTT 59.797 47.619 0.00 0.00 0.00 2.32
4778 5226 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
4779 5227 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
4780 5228 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
4781 5229 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
4782 5230 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
4783 5231 2.206576 AGGTTCAAATCCTGGTGCTC 57.793 50.000 0.00 0.00 33.62 4.26
4784 5232 2.242043 CAAGGTTCAAATCCTGGTGCT 58.758 47.619 0.00 0.00 35.27 4.40
4785 5233 1.273327 CCAAGGTTCAAATCCTGGTGC 59.727 52.381 0.00 0.00 35.27 5.01
4786 5234 2.297033 CACCAAGGTTCAAATCCTGGTG 59.703 50.000 8.91 8.91 42.07 4.17
4787 5235 2.597455 CACCAAGGTTCAAATCCTGGT 58.403 47.619 0.00 0.00 37.14 4.00
4788 5236 1.895131 CCACCAAGGTTCAAATCCTGG 59.105 52.381 0.00 0.00 35.27 4.45
4789 5237 1.895131 CCCACCAAGGTTCAAATCCTG 59.105 52.381 0.00 0.00 35.27 3.86
4790 5238 1.827245 GCCCACCAAGGTTCAAATCCT 60.827 52.381 0.00 0.00 36.81 3.24
4791 5239 0.608130 GCCCACCAAGGTTCAAATCC 59.392 55.000 0.00 0.00 34.66 3.01
4792 5240 1.273327 CAGCCCACCAAGGTTCAAATC 59.727 52.381 0.00 0.00 34.66 2.17
4793 5241 1.341080 CAGCCCACCAAGGTTCAAAT 58.659 50.000 0.00 0.00 34.66 2.32
4794 5242 0.758685 CCAGCCCACCAAGGTTCAAA 60.759 55.000 0.00 0.00 34.66 2.69
4795 5243 1.152567 CCAGCCCACCAAGGTTCAA 60.153 57.895 0.00 0.00 34.66 2.69
4796 5244 2.520458 CCAGCCCACCAAGGTTCA 59.480 61.111 0.00 0.00 34.66 3.18
4797 5245 2.283173 CCCAGCCCACCAAGGTTC 60.283 66.667 0.00 0.00 34.66 3.62
4798 5246 3.914713 CCCCAGCCCACCAAGGTT 61.915 66.667 0.00 0.00 34.66 3.50
4800 5248 2.543797 TAACCCCAGCCCACCAAGG 61.544 63.158 0.00 0.00 37.03 3.61
4801 5249 1.304134 GTAACCCCAGCCCACCAAG 60.304 63.158 0.00 0.00 0.00 3.61
4802 5250 2.847650 GGTAACCCCAGCCCACCAA 61.848 63.158 0.00 0.00 0.00 3.67
4803 5251 3.261677 GGTAACCCCAGCCCACCA 61.262 66.667 0.00 0.00 0.00 4.17
4804 5252 3.261677 TGGTAACCCCAGCCCACC 61.262 66.667 0.00 0.00 38.72 4.61
4805 5253 2.035155 GTGGTAACCCCAGCCCAC 59.965 66.667 0.00 0.00 46.45 4.61
4806 5254 2.450699 TGTGGTAACCCCAGCCCA 60.451 61.111 0.00 0.00 46.45 5.36
4807 5255 2.355115 CTGTGGTAACCCCAGCCC 59.645 66.667 0.00 0.00 46.45 5.19
4808 5256 1.002502 GACTGTGGTAACCCCAGCC 60.003 63.158 0.00 0.00 46.45 4.85
4809 5257 1.002502 GGACTGTGGTAACCCCAGC 60.003 63.158 0.00 0.00 46.45 4.85
4810 5258 0.840722 AGGGACTGTGGTAACCCCAG 60.841 60.000 0.00 0.00 46.45 4.45
4811 5259 0.838987 GAGGGACTGTGGTAACCCCA 60.839 60.000 0.00 0.00 41.55 4.96
4812 5260 0.546988 AGAGGGACTGTGGTAACCCC 60.547 60.000 0.00 0.00 41.55 4.95
4813 5261 2.235650 GTTAGAGGGACTGTGGTAACCC 59.764 54.545 0.00 0.00 41.55 4.11
4814 5262 2.235650 GGTTAGAGGGACTGTGGTAACC 59.764 54.545 0.00 0.00 41.55 2.85
4815 5263 2.901839 TGGTTAGAGGGACTGTGGTAAC 59.098 50.000 0.00 0.00 41.55 2.50
4816 5264 3.263369 TGGTTAGAGGGACTGTGGTAA 57.737 47.619 0.00 0.00 41.55 2.85
4817 5265 3.371965 GATGGTTAGAGGGACTGTGGTA 58.628 50.000 0.00 0.00 41.55 3.25
4818 5266 2.188817 GATGGTTAGAGGGACTGTGGT 58.811 52.381 0.00 0.00 41.55 4.16
4819 5267 1.486726 GGATGGTTAGAGGGACTGTGG 59.513 57.143 0.00 0.00 41.55 4.17
4820 5268 2.187958 TGGATGGTTAGAGGGACTGTG 58.812 52.381 0.00 0.00 41.55 3.66
4821 5269 2.572104 GTTGGATGGTTAGAGGGACTGT 59.428 50.000 0.00 0.00 41.55 3.55
4822 5270 2.092914 GGTTGGATGGTTAGAGGGACTG 60.093 54.545 0.00 0.00 41.55 3.51
4824 5272 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
4825 5273 1.913419 GTGGTTGGATGGTTAGAGGGA 59.087 52.381 0.00 0.00 0.00 4.20
4826 5274 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
4827 5275 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
4828 5276 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
4829 5277 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
4830 5278 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
4843 5291 0.606401 ATGGAGCGAACCAACCTGTG 60.606 55.000 5.20 0.00 43.47 3.66
4844 5292 0.110486 AATGGAGCGAACCAACCTGT 59.890 50.000 5.20 0.00 43.47 4.00
4845 5293 1.247567 AAATGGAGCGAACCAACCTG 58.752 50.000 5.20 0.00 43.47 4.00
4846 5294 1.995376 AAAATGGAGCGAACCAACCT 58.005 45.000 5.20 0.00 43.47 3.50
4847 5295 2.554893 TGTAAAATGGAGCGAACCAACC 59.445 45.455 5.20 0.00 43.47 3.77
4848 5296 3.907894 TGTAAAATGGAGCGAACCAAC 57.092 42.857 5.20 0.73 43.47 3.77
4849 5297 3.886505 AGTTGTAAAATGGAGCGAACCAA 59.113 39.130 5.20 0.00 43.47 3.67
4850 5298 3.482436 AGTTGTAAAATGGAGCGAACCA 58.518 40.909 3.65 3.65 44.41 3.67
4851 5299 4.226761 CAAGTTGTAAAATGGAGCGAACC 58.773 43.478 0.00 0.00 0.00 3.62
4852 5300 4.226761 CCAAGTTGTAAAATGGAGCGAAC 58.773 43.478 1.45 0.00 37.27 3.95
4853 5301 3.886505 ACCAAGTTGTAAAATGGAGCGAA 59.113 39.130 1.45 0.00 37.27 4.70
4854 5302 3.482436 ACCAAGTTGTAAAATGGAGCGA 58.518 40.909 1.45 0.00 37.27 4.93
4855 5303 3.915437 ACCAAGTTGTAAAATGGAGCG 57.085 42.857 1.45 0.00 37.27 5.03
4856 5304 5.195001 TCAACCAAGTTGTAAAATGGAGC 57.805 39.130 7.30 0.00 43.23 4.70
4857 5305 7.209475 ACATTCAACCAAGTTGTAAAATGGAG 58.791 34.615 17.49 2.44 43.23 3.86
4858 5306 7.118496 ACATTCAACCAAGTTGTAAAATGGA 57.882 32.000 17.49 0.71 43.23 3.41
4859 5307 8.141268 AGTACATTCAACCAAGTTGTAAAATGG 58.859 33.333 17.49 0.00 43.23 3.16
4862 5310 8.623030 GGTAGTACATTCAACCAAGTTGTAAAA 58.377 33.333 7.30 0.00 43.23 1.52
4863 5311 7.229106 GGGTAGTACATTCAACCAAGTTGTAAA 59.771 37.037 7.30 0.00 43.23 2.01
4864 5312 6.711645 GGGTAGTACATTCAACCAAGTTGTAA 59.288 38.462 7.30 2.12 43.23 2.41
4865 5313 6.232692 GGGTAGTACATTCAACCAAGTTGTA 58.767 40.000 7.30 0.00 43.23 2.41
4866 5314 5.067954 GGGTAGTACATTCAACCAAGTTGT 58.932 41.667 7.30 0.00 43.23 3.32
4867 5315 4.457949 GGGGTAGTACATTCAACCAAGTTG 59.542 45.833 2.06 0.96 43.99 3.16
4868 5316 4.659115 GGGGTAGTACATTCAACCAAGTT 58.341 43.478 2.06 0.00 33.46 2.66
4869 5317 3.307199 CGGGGTAGTACATTCAACCAAGT 60.307 47.826 2.06 0.00 33.46 3.16
4870 5318 3.267483 CGGGGTAGTACATTCAACCAAG 58.733 50.000 2.06 0.00 33.46 3.61
4871 5319 2.027007 CCGGGGTAGTACATTCAACCAA 60.027 50.000 2.06 0.00 33.46 3.67
4872 5320 1.555992 CCGGGGTAGTACATTCAACCA 59.444 52.381 2.06 0.00 33.46 3.67
4873 5321 1.556451 ACCGGGGTAGTACATTCAACC 59.444 52.381 6.32 0.00 0.00 3.77
4874 5322 2.419159 GGACCGGGGTAGTACATTCAAC 60.419 54.545 6.32 0.00 0.00 3.18
4875 5323 1.832998 GGACCGGGGTAGTACATTCAA 59.167 52.381 6.32 0.00 0.00 2.69
4876 5324 1.488390 GGACCGGGGTAGTACATTCA 58.512 55.000 6.32 0.00 0.00 2.57
4920 5368 6.558771 TTATATGCCATGAATTTGGAGACG 57.441 37.500 0.04 0.00 39.25 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.