Multiple sequence alignment - TraesCS2D01G584200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G584200 chr2D 100.000 3215 0 0 1 3215 643824754 643827968 0.000000e+00 5938.0
1 TraesCS2D01G584200 chr2D 81.105 1556 234 34 730 2275 643841266 643842771 0.000000e+00 1190.0
2 TraesCS2D01G584200 chr2D 96.564 291 4 3 1 287 643818084 643818372 8.070000e-131 477.0
3 TraesCS2D01G584200 chr2D 80.000 465 78 11 971 1426 584306847 584306389 2.390000e-86 329.0
4 TraesCS2D01G584200 chr2D 80.365 438 69 14 1000 1426 584295851 584295420 1.860000e-82 316.0
5 TraesCS2D01G584200 chr2D 89.773 176 18 0 291 466 19560202 19560027 3.230000e-55 226.0
6 TraesCS2D01G584200 chr2D 95.312 128 4 2 3089 3215 327559049 327558923 5.440000e-48 202.0
7 TraesCS2D01G584200 chr2D 82.418 182 21 4 2838 3017 547680205 547680377 7.190000e-32 148.0
8 TraesCS2D01G584200 chr2D 79.605 152 26 4 1040 1190 644773201 644773348 1.580000e-18 104.0
9 TraesCS2D01G584200 chr2A 94.138 1723 82 9 728 2445 768690974 768692682 0.000000e+00 2604.0
10 TraesCS2D01G584200 chr2A 81.933 1738 243 39 730 2445 768719454 768721142 0.000000e+00 1404.0
11 TraesCS2D01G584200 chr2A 91.164 464 39 1 2743 3204 768693042 768693505 2.110000e-176 628.0
12 TraesCS2D01G584200 chr2A 81.651 436 65 11 1000 1426 718470255 718469826 6.600000e-92 348.0
13 TraesCS2D01G584200 chr2A 92.361 144 10 1 2606 2749 768692681 768692823 1.510000e-48 204.0
14 TraesCS2D01G584200 chr2A 75.568 352 72 10 1043 1390 770019737 770020078 9.230000e-36 161.0
15 TraesCS2D01G584200 chr2A 84.524 84 9 2 568 647 768683960 768684043 2.660000e-11 80.5
16 TraesCS2D01G584200 chr2B 95.213 1128 44 7 1438 2560 793279196 793278074 0.000000e+00 1775.0
17 TraesCS2D01G584200 chr2B 80.810 1678 273 29 775 2445 793262915 793261280 0.000000e+00 1269.0
18 TraesCS2D01G584200 chr2B 94.776 670 27 3 728 1397 793279858 793279197 0.000000e+00 1037.0
19 TraesCS2D01G584200 chr2B 84.910 444 32 11 291 715 793280266 793279839 1.780000e-112 416.0
20 TraesCS2D01G584200 chr2B 90.452 199 17 2 2555 2752 793277919 793277722 8.850000e-66 261.0
21 TraesCS2D01G584200 chr2B 77.320 291 58 6 1040 1326 790844813 790845099 7.140000e-37 165.0
22 TraesCS2D01G584200 chr2B 81.461 178 28 3 2837 3014 10166562 10166734 1.200000e-29 141.0
23 TraesCS2D01G584200 chr2B 78.443 167 33 1 1025 1191 790604994 790605157 4.390000e-19 106.0
24 TraesCS2D01G584200 chr3D 97.535 284 7 0 4 287 489781806 489781523 1.340000e-133 486.0
25 TraesCS2D01G584200 chr3D 96.207 290 10 1 1 289 51381256 51380967 1.040000e-129 473.0
26 TraesCS2D01G584200 chr3D 95.789 285 8 4 1 283 331797521 331797239 1.050000e-124 457.0
27 TraesCS2D01G584200 chr3D 94.257 296 12 5 1 293 331755028 331754735 6.330000e-122 448.0
28 TraesCS2D01G584200 chr3D 91.713 181 12 3 2431 2608 460988703 460988883 6.890000e-62 248.0
29 TraesCS2D01G584200 chr3D 86.932 176 15 2 2835 3010 469389436 469389269 1.180000e-44 191.0
30 TraesCS2D01G584200 chr3D 86.932 176 13 4 2833 3008 528190687 528190522 4.230000e-44 189.0
31 TraesCS2D01G584200 chr3D 83.708 178 21 3 2830 3007 73489599 73489430 9.230000e-36 161.0
32 TraesCS2D01G584200 chr3D 83.616 177 21 2 2838 3014 187836469 187836301 3.320000e-35 159.0
33 TraesCS2D01G584200 chr3D 82.682 179 22 3 2837 3015 604288787 604288956 2.000000e-32 150.0
34 TraesCS2D01G584200 chr3A 95.819 287 12 0 1 287 152704545 152704831 6.280000e-127 464.0
35 TraesCS2D01G584200 chr3A 88.462 182 20 1 288 469 712689613 712689793 5.400000e-53 219.0
36 TraesCS2D01G584200 chr3A 96.032 126 5 0 3090 3215 57383151 57383276 4.200000e-49 206.0
37 TraesCS2D01G584200 chr5D 95.122 287 13 1 1 287 361075307 361075022 4.890000e-123 451.0
38 TraesCS2D01G584200 chr5D 93.939 297 10 5 1 289 396663072 396662776 2.940000e-120 442.0
39 TraesCS2D01G584200 chr5D 91.758 182 11 4 2431 2608 258573387 258573206 1.910000e-62 250.0
40 TraesCS2D01G584200 chr5D 85.311 177 17 3 2838 3014 151671709 151671542 1.190000e-39 174.0
41 TraesCS2D01G584200 chr5D 83.871 155 21 3 2865 3016 473124764 473124917 9.300000e-31 145.0
42 TraesCS2D01G584200 chr5D 87.500 48 6 0 2818 2865 256465228 256465275 4.480000e-04 56.5
43 TraesCS2D01G584200 chr7D 95.053 283 13 1 1 283 462065160 462064879 8.180000e-121 444.0
44 TraesCS2D01G584200 chr7D 92.265 181 10 4 2431 2608 42589898 42589719 1.480000e-63 254.0
45 TraesCS2D01G584200 chr7D 92.135 178 11 3 2434 2608 549144134 549143957 6.890000e-62 248.0
46 TraesCS2D01G584200 chr7D 88.268 179 20 1 288 466 52260623 52260800 2.510000e-51 213.0
47 TraesCS2D01G584200 chr7D 86.286 175 14 4 2838 3011 414094772 414094937 7.080000e-42 182.0
48 TraesCS2D01G584200 chr5B 92.818 181 10 3 2431 2608 320746128 320746308 3.180000e-65 259.0
49 TraesCS2D01G584200 chr5B 97.222 36 0 1 2831 2865 308194564 308194529 3.460000e-05 60.2
50 TraesCS2D01G584200 chr5A 92.265 181 11 3 2431 2608 303853602 303853782 1.480000e-63 254.0
51 TraesCS2D01G584200 chr5A 88.268 179 20 1 288 466 623382615 623382792 2.510000e-51 213.0
52 TraesCS2D01G584200 chr5A 97.479 119 3 0 3097 3215 283633564 283633446 1.510000e-48 204.0
53 TraesCS2D01G584200 chr1D 92.265 181 11 3 2431 2608 356185758 356185938 1.480000e-63 254.0
54 TraesCS2D01G584200 chr1D 88.636 176 20 0 288 463 357448328 357448503 6.990000e-52 215.0
55 TraesCS2D01G584200 chr1D 87.006 177 17 1 2836 3012 121624624 121624454 9.100000e-46 195.0
56 TraesCS2D01G584200 chr1D 87.135 171 13 3 2838 3008 415400414 415400253 5.480000e-43 185.0
57 TraesCS2D01G584200 chr1D 97.143 35 1 0 2831 2865 219479772 219479806 3.460000e-05 60.2
58 TraesCS2D01G584200 chr6D 91.713 181 12 3 2431 2608 307366429 307366609 6.890000e-62 248.0
59 TraesCS2D01G584200 chr6D 89.773 176 18 0 288 463 107767506 107767681 3.230000e-55 226.0
60 TraesCS2D01G584200 chr6D 85.333 150 21 1 2865 3014 229431033 229430885 1.540000e-33 154.0
61 TraesCS2D01G584200 chr7A 90.698 172 16 0 295 466 169402592 169402763 2.490000e-56 230.0
62 TraesCS2D01G584200 chr7B 88.268 179 21 0 288 466 108270276 108270098 6.990000e-52 215.0
63 TraesCS2D01G584200 chr7B 92.593 135 10 0 3080 3214 595459903 595460037 9.100000e-46 195.0
64 TraesCS2D01G584200 chr7B 76.630 184 25 12 2835 3011 714453507 714453335 5.710000e-13 86.1
65 TraesCS2D01G584200 chr3B 88.571 175 20 0 288 462 769476792 769476966 2.510000e-51 213.0
66 TraesCS2D01G584200 chr3B 85.417 144 15 5 2884 3023 9988735 9988876 9.300000e-31 145.0
67 TraesCS2D01G584200 chr4A 97.500 120 3 0 3096 3215 583161050 583161169 4.200000e-49 206.0
68 TraesCS2D01G584200 chr1A 97.479 119 3 0 3097 3215 458512279 458512397 1.510000e-48 204.0
69 TraesCS2D01G584200 chr1A 96.694 121 4 0 3095 3215 181768214 181768334 5.440000e-48 202.0
70 TraesCS2D01G584200 chr6A 96.000 125 4 1 3092 3215 81124930 81124806 5.440000e-48 202.0
71 TraesCS2D01G584200 chr6B 86.782 174 15 2 2834 3007 131720918 131720753 1.520000e-43 187.0
72 TraesCS2D01G584200 chr4D 85.792 183 16 4 2831 3011 44169327 44169153 5.480000e-43 185.0
73 TraesCS2D01G584200 chr4D 86.111 180 15 4 2833 3011 484111929 484111759 5.480000e-43 185.0
74 TraesCS2D01G584200 chr4B 74.595 185 34 8 2826 3008 504163115 504162942 5.760000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G584200 chr2D 643824754 643827968 3214 False 5938.000000 5938 100.000000 1 3215 1 chr2D.!!$F3 3214
1 TraesCS2D01G584200 chr2D 643841266 643842771 1505 False 1190.000000 1190 81.105000 730 2275 1 chr2D.!!$F4 1545
2 TraesCS2D01G584200 chr2A 768719454 768721142 1688 False 1404.000000 1404 81.933000 730 2445 1 chr2A.!!$F2 1715
3 TraesCS2D01G584200 chr2A 768690974 768693505 2531 False 1145.333333 2604 92.554333 728 3204 3 chr2A.!!$F4 2476
4 TraesCS2D01G584200 chr2B 793261280 793262915 1635 True 1269.000000 1269 80.810000 775 2445 1 chr2B.!!$R1 1670
5 TraesCS2D01G584200 chr2B 793277722 793280266 2544 True 872.250000 1775 91.337750 291 2752 4 chr2B.!!$R2 2461

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
698 718 0.026933 CACACGCACGCACTACAAAA 59.973 50.0 0.00 0.0 0.00 2.44 F
877 906 0.108329 CCCGTGTTACACTAGGGCAG 60.108 60.0 13.94 0.0 35.09 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1534 1566 3.123804 GAAGCACGACCGTGATCATAAT 58.876 45.455 24.46 4.27 44.50 1.28 R
2711 2929 1.361793 CCGGCCGAGAACGAATTTTA 58.638 50.000 30.73 0.00 42.66 1.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.121689 AAGCCACCCCCACCACTA 60.122 61.111 0.00 0.00 0.00 2.74
18 19 2.231380 AAGCCACCCCCACCACTAG 61.231 63.158 0.00 0.00 0.00 2.57
19 20 2.609610 GCCACCCCCACCACTAGA 60.610 66.667 0.00 0.00 0.00 2.43
20 21 2.967946 GCCACCCCCACCACTAGAC 61.968 68.421 0.00 0.00 0.00 2.59
21 22 1.229529 CCACCCCCACCACTAGACT 60.230 63.158 0.00 0.00 0.00 3.24
22 23 0.042131 CCACCCCCACCACTAGACTA 59.958 60.000 0.00 0.00 0.00 2.59
23 24 1.486211 CACCCCCACCACTAGACTAG 58.514 60.000 8.00 8.00 0.00 2.57
24 25 0.338814 ACCCCCACCACTAGACTAGG 59.661 60.000 14.03 0.44 0.00 3.02
25 26 0.398664 CCCCCACCACTAGACTAGGG 60.399 65.000 14.03 9.64 36.04 3.53
30 31 3.135027 CCACTAGACTAGGGGGCTC 57.865 63.158 21.63 0.00 45.93 4.70
31 32 0.558712 CCACTAGACTAGGGGGCTCT 59.441 60.000 21.63 0.00 45.93 4.09
32 33 1.062810 CCACTAGACTAGGGGGCTCTT 60.063 57.143 21.63 0.00 45.93 2.85
33 34 2.627217 CCACTAGACTAGGGGGCTCTTT 60.627 54.545 21.63 0.00 45.93 2.52
34 35 3.108376 CACTAGACTAGGGGGCTCTTTT 58.892 50.000 14.03 0.00 33.70 2.27
35 36 3.133183 CACTAGACTAGGGGGCTCTTTTC 59.867 52.174 14.03 0.00 33.70 2.29
36 37 2.651642 AGACTAGGGGGCTCTTTTCT 57.348 50.000 0.00 0.00 0.00 2.52
37 38 2.192263 AGACTAGGGGGCTCTTTTCTG 58.808 52.381 0.00 0.00 0.00 3.02
38 39 0.621082 ACTAGGGGGCTCTTTTCTGC 59.379 55.000 0.00 0.00 0.00 4.26
39 40 0.915364 CTAGGGGGCTCTTTTCTGCT 59.085 55.000 0.00 0.00 0.00 4.24
40 41 2.119495 CTAGGGGGCTCTTTTCTGCTA 58.881 52.381 0.00 0.00 0.00 3.49
41 42 0.621082 AGGGGGCTCTTTTCTGCTAC 59.379 55.000 0.00 0.00 0.00 3.58
42 43 0.394488 GGGGGCTCTTTTCTGCTACC 60.394 60.000 0.00 0.00 0.00 3.18
43 44 0.621082 GGGGCTCTTTTCTGCTACCT 59.379 55.000 0.00 0.00 0.00 3.08
44 45 1.407575 GGGGCTCTTTTCTGCTACCTC 60.408 57.143 0.00 0.00 0.00 3.85
45 46 1.557371 GGGCTCTTTTCTGCTACCTCT 59.443 52.381 0.00 0.00 0.00 3.69
46 47 2.419436 GGGCTCTTTTCTGCTACCTCTC 60.419 54.545 0.00 0.00 0.00 3.20
47 48 2.499693 GGCTCTTTTCTGCTACCTCTCT 59.500 50.000 0.00 0.00 0.00 3.10
48 49 3.430236 GGCTCTTTTCTGCTACCTCTCTC 60.430 52.174 0.00 0.00 0.00 3.20
49 50 3.447229 GCTCTTTTCTGCTACCTCTCTCT 59.553 47.826 0.00 0.00 0.00 3.10
50 51 4.440112 GCTCTTTTCTGCTACCTCTCTCTC 60.440 50.000 0.00 0.00 0.00 3.20
51 52 4.929479 TCTTTTCTGCTACCTCTCTCTCT 58.071 43.478 0.00 0.00 0.00 3.10
52 53 4.947388 TCTTTTCTGCTACCTCTCTCTCTC 59.053 45.833 0.00 0.00 0.00 3.20
53 54 4.584638 TTTCTGCTACCTCTCTCTCTCT 57.415 45.455 0.00 0.00 0.00 3.10
54 55 5.702065 TTTCTGCTACCTCTCTCTCTCTA 57.298 43.478 0.00 0.00 0.00 2.43
55 56 4.955811 TCTGCTACCTCTCTCTCTCTAG 57.044 50.000 0.00 0.00 0.00 2.43
56 57 4.295201 TCTGCTACCTCTCTCTCTCTAGT 58.705 47.826 0.00 0.00 0.00 2.57
57 58 4.344102 TCTGCTACCTCTCTCTCTCTAGTC 59.656 50.000 0.00 0.00 0.00 2.59
58 59 4.295201 TGCTACCTCTCTCTCTCTAGTCT 58.705 47.826 0.00 0.00 0.00 3.24
59 60 4.344102 TGCTACCTCTCTCTCTCTAGTCTC 59.656 50.000 0.00 0.00 0.00 3.36
60 61 4.344102 GCTACCTCTCTCTCTCTAGTCTCA 59.656 50.000 0.00 0.00 0.00 3.27
61 62 5.509840 GCTACCTCTCTCTCTCTAGTCTCAG 60.510 52.000 0.00 0.00 0.00 3.35
62 63 3.711704 ACCTCTCTCTCTCTAGTCTCAGG 59.288 52.174 0.00 0.00 0.00 3.86
63 64 3.967326 CCTCTCTCTCTCTAGTCTCAGGA 59.033 52.174 0.00 0.00 0.00 3.86
64 65 4.202264 CCTCTCTCTCTCTAGTCTCAGGAC 60.202 54.167 0.00 0.00 42.41 3.85
75 76 1.136110 GTCTCAGGACTTAGCTCAGGC 59.864 57.143 0.00 0.00 39.24 4.85
76 77 1.189752 CTCAGGACTTAGCTCAGGCA 58.810 55.000 2.54 0.00 41.70 4.75
77 78 1.761784 CTCAGGACTTAGCTCAGGCAT 59.238 52.381 2.54 0.00 41.70 4.40
78 79 1.483827 TCAGGACTTAGCTCAGGCATG 59.516 52.381 9.16 9.16 41.70 4.06
79 80 0.835941 AGGACTTAGCTCAGGCATGG 59.164 55.000 2.54 0.00 41.70 3.66
80 81 0.179034 GGACTTAGCTCAGGCATGGG 60.179 60.000 2.54 0.00 41.70 4.00
81 82 0.179034 GACTTAGCTCAGGCATGGGG 60.179 60.000 0.00 0.00 41.70 4.96
82 83 0.621571 ACTTAGCTCAGGCATGGGGA 60.622 55.000 0.00 0.00 41.70 4.81
83 84 0.769873 CTTAGCTCAGGCATGGGGAT 59.230 55.000 0.00 0.00 41.70 3.85
84 85 0.767375 TTAGCTCAGGCATGGGGATC 59.233 55.000 0.00 0.00 41.70 3.36
85 86 1.130054 TAGCTCAGGCATGGGGATCC 61.130 60.000 1.92 1.92 41.70 3.36
86 87 2.429058 CTCAGGCATGGGGATCCG 59.571 66.667 5.45 0.00 35.24 4.18
87 88 2.366837 TCAGGCATGGGGATCCGT 60.367 61.111 5.45 0.00 35.24 4.69
88 89 1.987807 CTCAGGCATGGGGATCCGTT 61.988 60.000 5.45 0.00 35.24 4.44
89 90 1.526917 CAGGCATGGGGATCCGTTC 60.527 63.158 5.45 0.00 35.24 3.95
90 91 1.694169 AGGCATGGGGATCCGTTCT 60.694 57.895 5.45 0.00 35.24 3.01
91 92 1.227973 GGCATGGGGATCCGTTCTC 60.228 63.158 5.45 0.00 35.24 2.87
92 93 1.227973 GCATGGGGATCCGTTCTCC 60.228 63.158 5.45 0.88 46.42 3.71
93 94 1.700042 GCATGGGGATCCGTTCTCCT 61.700 60.000 5.45 0.00 46.38 3.69
94 95 0.394565 CATGGGGATCCGTTCTCCTC 59.605 60.000 5.45 0.00 46.38 3.71
95 96 0.266152 ATGGGGATCCGTTCTCCTCT 59.734 55.000 5.45 0.00 46.38 3.69
96 97 0.397254 TGGGGATCCGTTCTCCTCTC 60.397 60.000 5.45 0.00 46.38 3.20
97 98 0.105913 GGGGATCCGTTCTCCTCTCT 60.106 60.000 5.45 0.00 42.41 3.10
98 99 1.324383 GGGATCCGTTCTCCTCTCTC 58.676 60.000 5.45 0.00 33.05 3.20
99 100 0.948678 GGATCCGTTCTCCTCTCTCG 59.051 60.000 0.00 0.00 0.00 4.04
100 101 0.309612 GATCCGTTCTCCTCTCTCGC 59.690 60.000 0.00 0.00 0.00 5.03
101 102 0.394488 ATCCGTTCTCCTCTCTCGCA 60.394 55.000 0.00 0.00 0.00 5.10
102 103 0.394488 TCCGTTCTCCTCTCTCGCAT 60.394 55.000 0.00 0.00 0.00 4.73
103 104 1.134189 TCCGTTCTCCTCTCTCGCATA 60.134 52.381 0.00 0.00 0.00 3.14
104 105 1.002251 CCGTTCTCCTCTCTCGCATAC 60.002 57.143 0.00 0.00 0.00 2.39
105 106 1.671328 CGTTCTCCTCTCTCGCATACA 59.329 52.381 0.00 0.00 0.00 2.29
106 107 2.292016 CGTTCTCCTCTCTCGCATACAT 59.708 50.000 0.00 0.00 0.00 2.29
107 108 3.243234 CGTTCTCCTCTCTCGCATACATT 60.243 47.826 0.00 0.00 0.00 2.71
108 109 3.998099 TCTCCTCTCTCGCATACATTG 57.002 47.619 0.00 0.00 0.00 2.82
109 110 3.291584 TCTCCTCTCTCGCATACATTGT 58.708 45.455 0.00 0.00 0.00 2.71
110 111 4.461198 TCTCCTCTCTCGCATACATTGTA 58.539 43.478 0.00 0.00 0.00 2.41
111 112 4.887655 TCTCCTCTCTCGCATACATTGTAA 59.112 41.667 0.00 0.00 0.00 2.41
112 113 5.536538 TCTCCTCTCTCGCATACATTGTAAT 59.463 40.000 0.00 0.00 0.00 1.89
113 114 5.773575 TCCTCTCTCGCATACATTGTAATC 58.226 41.667 0.00 0.00 0.00 1.75
114 115 5.536538 TCCTCTCTCGCATACATTGTAATCT 59.463 40.000 0.00 0.00 0.00 2.40
115 116 5.861251 CCTCTCTCGCATACATTGTAATCTC 59.139 44.000 0.00 0.00 0.00 2.75
116 117 5.773575 TCTCTCGCATACATTGTAATCTCC 58.226 41.667 0.00 0.00 0.00 3.71
117 118 4.546570 TCTCGCATACATTGTAATCTCCG 58.453 43.478 0.00 0.67 0.00 4.63
118 119 3.649073 TCGCATACATTGTAATCTCCGG 58.351 45.455 0.00 0.00 0.00 5.14
119 120 3.319689 TCGCATACATTGTAATCTCCGGA 59.680 43.478 2.93 2.93 0.00 5.14
120 121 4.021456 TCGCATACATTGTAATCTCCGGAT 60.021 41.667 3.57 0.00 0.00 4.18
121 122 5.184287 TCGCATACATTGTAATCTCCGGATA 59.816 40.000 3.57 0.00 0.00 2.59
122 123 5.288712 CGCATACATTGTAATCTCCGGATAC 59.711 44.000 3.57 5.58 0.00 2.24
123 124 6.163476 GCATACATTGTAATCTCCGGATACA 58.837 40.000 3.57 8.64 0.00 2.29
124 125 6.818644 GCATACATTGTAATCTCCGGATACAT 59.181 38.462 15.36 5.63 0.00 2.29
125 126 7.979537 GCATACATTGTAATCTCCGGATACATA 59.020 37.037 15.36 7.37 0.00 2.29
126 127 9.302345 CATACATTGTAATCTCCGGATACATAC 57.698 37.037 15.36 11.89 0.00 2.39
127 128 7.540474 ACATTGTAATCTCCGGATACATACT 57.460 36.000 15.36 3.58 0.00 2.12
128 129 7.603651 ACATTGTAATCTCCGGATACATACTC 58.396 38.462 15.36 0.00 0.00 2.59
129 130 5.874895 TGTAATCTCCGGATACATACTCG 57.125 43.478 3.57 0.00 0.00 4.18
130 131 4.698780 TGTAATCTCCGGATACATACTCGG 59.301 45.833 3.57 0.00 43.42 4.63
137 138 6.017400 TCCGGATACATACTCGGATAAAAC 57.983 41.667 0.00 0.00 45.37 2.43
138 139 5.535783 TCCGGATACATACTCGGATAAAACA 59.464 40.000 0.00 0.00 45.37 2.83
139 140 6.040729 TCCGGATACATACTCGGATAAAACAA 59.959 38.462 0.00 0.00 45.37 2.83
140 141 6.702723 CCGGATACATACTCGGATAAAACAAA 59.297 38.462 0.00 0.00 44.69 2.83
141 142 7.095774 CCGGATACATACTCGGATAAAACAAAG 60.096 40.741 0.00 0.00 44.69 2.77
142 143 7.568861 CGGATACATACTCGGATAAAACAAAGC 60.569 40.741 0.00 0.00 0.00 3.51
143 144 5.813080 ACATACTCGGATAAAACAAAGCC 57.187 39.130 0.00 0.00 0.00 4.35
144 145 5.497474 ACATACTCGGATAAAACAAAGCCT 58.503 37.500 0.00 0.00 0.00 4.58
145 146 5.585047 ACATACTCGGATAAAACAAAGCCTC 59.415 40.000 0.00 0.00 0.00 4.70
146 147 4.287766 ACTCGGATAAAACAAAGCCTCT 57.712 40.909 0.00 0.00 0.00 3.69
147 148 4.254492 ACTCGGATAAAACAAAGCCTCTC 58.746 43.478 0.00 0.00 0.00 3.20
148 149 3.606687 TCGGATAAAACAAAGCCTCTCC 58.393 45.455 0.00 0.00 0.00 3.71
149 150 2.351726 CGGATAAAACAAAGCCTCTCCG 59.648 50.000 0.00 0.00 38.51 4.63
150 151 2.683362 GGATAAAACAAAGCCTCTCCGG 59.317 50.000 0.00 0.00 0.00 5.14
151 152 3.606687 GATAAAACAAAGCCTCTCCGGA 58.393 45.455 2.93 2.93 33.16 5.14
152 153 1.897560 AAAACAAAGCCTCTCCGGAG 58.102 50.000 26.32 26.32 39.18 4.63
153 154 0.606673 AAACAAAGCCTCTCCGGAGC 60.607 55.000 27.39 16.56 38.21 4.70
154 155 1.768684 AACAAAGCCTCTCCGGAGCA 61.769 55.000 27.39 14.38 38.21 4.26
155 156 1.743252 CAAAGCCTCTCCGGAGCAC 60.743 63.158 27.39 17.32 38.21 4.40
156 157 3.302347 AAAGCCTCTCCGGAGCACG 62.302 63.158 27.39 16.24 43.80 5.34
166 167 2.799371 GGAGCACGAGACGTAGGG 59.201 66.667 0.00 0.00 38.32 3.53
167 168 2.045131 GGAGCACGAGACGTAGGGT 61.045 63.158 0.00 0.00 38.32 4.34
168 169 1.593296 GGAGCACGAGACGTAGGGTT 61.593 60.000 0.00 0.00 38.32 4.11
169 170 0.456312 GAGCACGAGACGTAGGGTTG 60.456 60.000 0.00 0.00 38.32 3.77
170 171 1.177256 AGCACGAGACGTAGGGTTGT 61.177 55.000 0.00 0.00 38.32 3.32
171 172 0.319297 GCACGAGACGTAGGGTTGTT 60.319 55.000 0.00 0.00 38.32 2.83
172 173 1.068333 GCACGAGACGTAGGGTTGTTA 60.068 52.381 0.00 0.00 38.32 2.41
173 174 2.416431 GCACGAGACGTAGGGTTGTTAT 60.416 50.000 0.00 0.00 38.32 1.89
174 175 3.432782 CACGAGACGTAGGGTTGTTATC 58.567 50.000 0.00 0.00 38.32 1.75
175 176 3.128242 CACGAGACGTAGGGTTGTTATCT 59.872 47.826 0.00 0.00 38.32 1.98
176 177 3.376546 ACGAGACGTAGGGTTGTTATCTC 59.623 47.826 0.00 0.00 38.73 2.75
177 178 3.243002 CGAGACGTAGGGTTGTTATCTCC 60.243 52.174 0.00 0.00 0.00 3.71
178 179 3.698040 GAGACGTAGGGTTGTTATCTCCA 59.302 47.826 0.00 0.00 0.00 3.86
179 180 4.287552 AGACGTAGGGTTGTTATCTCCAT 58.712 43.478 0.00 0.00 0.00 3.41
180 181 4.341520 AGACGTAGGGTTGTTATCTCCATC 59.658 45.833 0.00 0.00 0.00 3.51
181 182 3.067742 ACGTAGGGTTGTTATCTCCATCG 59.932 47.826 0.00 0.00 0.00 3.84
182 183 3.067742 CGTAGGGTTGTTATCTCCATCGT 59.932 47.826 0.00 0.00 0.00 3.73
183 184 3.543680 AGGGTTGTTATCTCCATCGTG 57.456 47.619 0.00 0.00 0.00 4.35
184 185 3.104512 AGGGTTGTTATCTCCATCGTGA 58.895 45.455 0.00 0.00 0.00 4.35
185 186 3.133003 AGGGTTGTTATCTCCATCGTGAG 59.867 47.826 0.00 0.00 0.00 3.51
186 187 3.132289 GGGTTGTTATCTCCATCGTGAGA 59.868 47.826 4.93 4.93 45.01 3.27
196 197 2.282958 TCGTGAGAGGCCCGAACT 60.283 61.111 0.00 0.00 34.84 3.01
197 198 2.182030 CGTGAGAGGCCCGAACTC 59.818 66.667 0.00 4.45 35.20 3.01
198 199 2.182030 GTGAGAGGCCCGAACTCG 59.818 66.667 0.00 0.00 39.90 4.18
199 200 3.760035 TGAGAGGCCCGAACTCGC 61.760 66.667 0.00 0.00 39.90 5.03
200 201 3.453679 GAGAGGCCCGAACTCGCT 61.454 66.667 0.00 0.00 39.90 4.93
201 202 2.044252 AGAGGCCCGAACTCGCTA 60.044 61.111 0.00 0.00 39.90 4.26
202 203 1.664321 GAGAGGCCCGAACTCGCTAA 61.664 60.000 0.00 0.00 39.90 3.09
203 204 1.217244 GAGGCCCGAACTCGCTAAA 59.783 57.895 0.00 0.00 38.18 1.85
204 205 0.390735 GAGGCCCGAACTCGCTAAAA 60.391 55.000 0.00 0.00 38.18 1.52
205 206 0.672711 AGGCCCGAACTCGCTAAAAC 60.673 55.000 0.00 0.00 38.18 2.43
206 207 1.642037 GGCCCGAACTCGCTAAAACC 61.642 60.000 0.00 0.00 38.18 3.27
207 208 0.952010 GCCCGAACTCGCTAAAACCA 60.952 55.000 0.00 0.00 38.18 3.67
208 209 0.794473 CCCGAACTCGCTAAAACCAC 59.206 55.000 0.00 0.00 38.18 4.16
209 210 0.794473 CCGAACTCGCTAAAACCACC 59.206 55.000 0.00 0.00 38.18 4.61
210 211 0.437295 CGAACTCGCTAAAACCACCG 59.563 55.000 0.00 0.00 0.00 4.94
211 212 1.505425 GAACTCGCTAAAACCACCGT 58.495 50.000 0.00 0.00 0.00 4.83
212 213 1.193874 GAACTCGCTAAAACCACCGTG 59.806 52.381 0.00 0.00 0.00 4.94
213 214 0.105408 ACTCGCTAAAACCACCGTGT 59.895 50.000 0.00 0.00 0.00 4.49
214 215 0.788391 CTCGCTAAAACCACCGTGTC 59.212 55.000 0.00 0.00 0.00 3.67
215 216 0.104487 TCGCTAAAACCACCGTGTCA 59.896 50.000 0.00 0.00 0.00 3.58
216 217 0.233848 CGCTAAAACCACCGTGTCAC 59.766 55.000 0.00 0.00 0.00 3.67
217 218 0.589708 GCTAAAACCACCGTGTCACC 59.410 55.000 0.00 0.00 0.00 4.02
218 219 1.232119 CTAAAACCACCGTGTCACCC 58.768 55.000 0.00 0.00 0.00 4.61
219 220 0.545171 TAAAACCACCGTGTCACCCA 59.455 50.000 0.00 0.00 0.00 4.51
220 221 0.106419 AAAACCACCGTGTCACCCAT 60.106 50.000 0.00 0.00 0.00 4.00
221 222 0.106419 AAACCACCGTGTCACCCATT 60.106 50.000 0.00 0.00 0.00 3.16
222 223 0.106419 AACCACCGTGTCACCCATTT 60.106 50.000 0.00 0.00 0.00 2.32
223 224 0.821711 ACCACCGTGTCACCCATTTG 60.822 55.000 0.00 0.00 0.00 2.32
224 225 1.285641 CACCGTGTCACCCATTTGC 59.714 57.895 0.00 0.00 0.00 3.68
225 226 1.152860 ACCGTGTCACCCATTTGCA 60.153 52.632 0.00 0.00 0.00 4.08
226 227 0.539438 ACCGTGTCACCCATTTGCAT 60.539 50.000 0.00 0.00 0.00 3.96
227 228 0.171007 CCGTGTCACCCATTTGCATC 59.829 55.000 0.00 0.00 0.00 3.91
228 229 1.167851 CGTGTCACCCATTTGCATCT 58.832 50.000 0.00 0.00 0.00 2.90
229 230 1.131126 CGTGTCACCCATTTGCATCTC 59.869 52.381 0.00 0.00 0.00 2.75
230 231 1.131126 GTGTCACCCATTTGCATCTCG 59.869 52.381 0.00 0.00 0.00 4.04
231 232 1.003003 TGTCACCCATTTGCATCTCGA 59.997 47.619 0.00 0.00 0.00 4.04
232 233 2.292267 GTCACCCATTTGCATCTCGAT 58.708 47.619 0.00 0.00 0.00 3.59
233 234 3.118445 TGTCACCCATTTGCATCTCGATA 60.118 43.478 0.00 0.00 0.00 2.92
234 235 3.496130 GTCACCCATTTGCATCTCGATAG 59.504 47.826 0.00 0.00 0.00 2.08
250 251 5.392767 TCGATAGATCATGCTCCTTTACC 57.607 43.478 0.00 0.00 42.67 2.85
251 252 4.220821 TCGATAGATCATGCTCCTTTACCC 59.779 45.833 0.00 0.00 42.67 3.69
252 253 4.221703 CGATAGATCATGCTCCTTTACCCT 59.778 45.833 0.00 0.00 39.76 4.34
253 254 5.419155 CGATAGATCATGCTCCTTTACCCTA 59.581 44.000 0.00 0.00 39.76 3.53
254 255 6.097554 CGATAGATCATGCTCCTTTACCCTAT 59.902 42.308 0.00 0.00 39.76 2.57
255 256 5.753721 AGATCATGCTCCTTTACCCTATC 57.246 43.478 0.00 0.00 0.00 2.08
256 257 4.534103 AGATCATGCTCCTTTACCCTATCC 59.466 45.833 0.00 0.00 0.00 2.59
257 258 2.979678 TCATGCTCCTTTACCCTATCCC 59.020 50.000 0.00 0.00 0.00 3.85
258 259 2.889522 TGCTCCTTTACCCTATCCCT 57.110 50.000 0.00 0.00 0.00 4.20
259 260 3.145559 TGCTCCTTTACCCTATCCCTT 57.854 47.619 0.00 0.00 0.00 3.95
260 261 4.289837 TGCTCCTTTACCCTATCCCTTA 57.710 45.455 0.00 0.00 0.00 2.69
261 262 4.839589 TGCTCCTTTACCCTATCCCTTAT 58.160 43.478 0.00 0.00 0.00 1.73
262 263 5.232347 TGCTCCTTTACCCTATCCCTTATT 58.768 41.667 0.00 0.00 0.00 1.40
263 264 6.395598 TGCTCCTTTACCCTATCCCTTATTA 58.604 40.000 0.00 0.00 0.00 0.98
264 265 7.029390 TGCTCCTTTACCCTATCCCTTATTAT 58.971 38.462 0.00 0.00 0.00 1.28
265 266 7.519706 TGCTCCTTTACCCTATCCCTTATTATT 59.480 37.037 0.00 0.00 0.00 1.40
266 267 7.829706 GCTCCTTTACCCTATCCCTTATTATTG 59.170 40.741 0.00 0.00 0.00 1.90
267 268 8.823810 TCCTTTACCCTATCCCTTATTATTGT 57.176 34.615 0.00 0.00 0.00 2.71
268 269 8.887393 TCCTTTACCCTATCCCTTATTATTGTC 58.113 37.037 0.00 0.00 0.00 3.18
269 270 7.822822 CCTTTACCCTATCCCTTATTATTGTCG 59.177 40.741 0.00 0.00 0.00 4.35
270 271 5.757099 ACCCTATCCCTTATTATTGTCGG 57.243 43.478 0.00 0.00 0.00 4.79
271 272 5.408824 ACCCTATCCCTTATTATTGTCGGA 58.591 41.667 0.00 0.00 0.00 4.55
272 273 5.847817 ACCCTATCCCTTATTATTGTCGGAA 59.152 40.000 0.00 0.00 0.00 4.30
273 274 6.504279 ACCCTATCCCTTATTATTGTCGGAAT 59.496 38.462 0.00 0.00 0.00 3.01
274 275 7.048512 CCCTATCCCTTATTATTGTCGGAATC 58.951 42.308 0.00 0.00 0.00 2.52
275 276 6.757010 CCTATCCCTTATTATTGTCGGAATCG 59.243 42.308 0.00 0.00 37.82 3.34
276 277 5.540400 TCCCTTATTATTGTCGGAATCGT 57.460 39.130 0.00 0.00 37.69 3.73
277 278 5.920903 TCCCTTATTATTGTCGGAATCGTT 58.079 37.500 0.00 0.00 37.69 3.85
278 279 5.987347 TCCCTTATTATTGTCGGAATCGTTC 59.013 40.000 0.00 0.00 37.69 3.95
279 280 5.178809 CCCTTATTATTGTCGGAATCGTTCC 59.821 44.000 6.68 6.68 46.62 3.62
283 284 0.393448 TTGTCGGAATCGTTCCCACA 59.607 50.000 11.18 11.18 46.96 4.17
284 285 0.393448 TGTCGGAATCGTTCCCACAA 59.607 50.000 12.29 1.25 45.91 3.33
285 286 1.874739 TGTCGGAATCGTTCCCACAAC 60.875 52.381 12.29 6.87 45.91 3.32
286 287 4.436638 TGTCGGAATCGTTCCCACAACA 62.437 50.000 12.29 8.62 45.91 3.33
288 289 0.879090 GGAATCGTTCCCACAACACC 59.121 55.000 5.71 0.00 44.30 4.16
289 290 0.515564 GAATCGTTCCCACAACACCG 59.484 55.000 0.00 0.00 0.00 4.94
338 339 4.701171 ACACAAACCCTAACAAAACTCGAA 59.299 37.500 0.00 0.00 0.00 3.71
339 340 5.183522 ACACAAACCCTAACAAAACTCGAAA 59.816 36.000 0.00 0.00 0.00 3.46
340 341 6.094061 CACAAACCCTAACAAAACTCGAAAA 58.906 36.000 0.00 0.00 0.00 2.29
341 342 6.586844 CACAAACCCTAACAAAACTCGAAAAA 59.413 34.615 0.00 0.00 0.00 1.94
363 366 1.250840 ATGCAAAAACGGAGCCCTCC 61.251 55.000 4.19 4.19 46.18 4.30
371 374 2.040606 GGAGCCCTCCCACCAGTA 59.959 66.667 2.81 0.00 43.94 2.74
372 375 1.615424 GGAGCCCTCCCACCAGTAA 60.615 63.158 2.81 0.00 43.94 2.24
373 376 1.627297 GGAGCCCTCCCACCAGTAAG 61.627 65.000 2.81 0.00 43.94 2.34
374 377 1.616628 AGCCCTCCCACCAGTAAGG 60.617 63.158 0.00 0.00 45.67 2.69
375 378 3.741325 CCCTCCCACCAGTAAGGG 58.259 66.667 0.00 0.00 46.90 3.95
376 379 1.229853 CCCTCCCACCAGTAAGGGT 60.230 63.158 0.00 0.00 45.64 4.34
377 380 1.272554 CCCTCCCACCAGTAAGGGTC 61.273 65.000 0.00 0.00 45.64 4.46
378 381 1.614241 CCTCCCACCAGTAAGGGTCG 61.614 65.000 0.00 0.00 45.64 4.79
379 382 1.611261 TCCCACCAGTAAGGGTCGG 60.611 63.158 0.00 0.00 45.64 4.79
380 383 2.666098 CCCACCAGTAAGGGTCGGG 61.666 68.421 0.00 0.00 43.89 5.14
389 392 0.635009 TAAGGGTCGGGATCCACTCT 59.365 55.000 15.23 6.42 32.73 3.24
405 408 1.766625 CTCTGCTCCCATGGCCCTAG 61.767 65.000 6.09 2.04 0.00 3.02
466 469 1.831736 GTGGCAGAGAAACCCTAGCTA 59.168 52.381 0.00 0.00 0.00 3.32
467 470 1.831736 TGGCAGAGAAACCCTAGCTAC 59.168 52.381 0.00 0.00 0.00 3.58
481 484 7.685849 ACCCTAGCTACATAGGTGATAAAAA 57.314 36.000 0.83 0.00 40.77 1.94
539 544 2.223548 CGGGAAACACATGTGCATATGG 60.224 50.000 25.68 16.57 32.32 2.74
596 606 3.975083 TAGTGCGTTAGCCCGTGCG 62.975 63.158 0.00 0.00 44.33 5.34
604 614 2.638330 TTAGCCCGTGCGCAGGTATC 62.638 60.000 26.57 15.39 44.33 2.24
608 618 2.027605 CGTGCGCAGGTATCCGAT 59.972 61.111 21.45 0.00 0.00 4.18
647 657 1.268488 GCAATCACACGCTCACACAAA 60.268 47.619 0.00 0.00 0.00 2.83
648 658 2.605338 GCAATCACACGCTCACACAAAT 60.605 45.455 0.00 0.00 0.00 2.32
649 659 2.975193 CAATCACACGCTCACACAAATG 59.025 45.455 0.00 0.00 0.00 2.32
650 660 0.943673 TCACACGCTCACACAAATGG 59.056 50.000 0.00 0.00 0.00 3.16
651 661 0.040157 CACACGCTCACACAAATGGG 60.040 55.000 0.00 0.00 0.00 4.00
652 662 0.179032 ACACGCTCACACAAATGGGA 60.179 50.000 0.00 0.00 35.20 4.37
653 663 1.167851 CACGCTCACACAAATGGGAT 58.832 50.000 0.00 0.00 37.71 3.85
659 669 5.827797 ACGCTCACACAAATGGGATAAATAT 59.172 36.000 0.00 0.00 37.71 1.28
660 670 6.995686 ACGCTCACACAAATGGGATAAATATA 59.004 34.615 0.00 0.00 37.71 0.86
689 709 0.316607 TTCAACAATCACACGCACGC 60.317 50.000 0.00 0.00 0.00 5.34
695 715 0.598942 AATCACACGCACGCACTACA 60.599 50.000 0.00 0.00 0.00 2.74
696 716 0.598942 ATCACACGCACGCACTACAA 60.599 50.000 0.00 0.00 0.00 2.41
697 717 0.806492 TCACACGCACGCACTACAAA 60.806 50.000 0.00 0.00 0.00 2.83
698 718 0.026933 CACACGCACGCACTACAAAA 59.973 50.000 0.00 0.00 0.00 2.44
699 719 0.727970 ACACGCACGCACTACAAAAA 59.272 45.000 0.00 0.00 0.00 1.94
700 720 1.267832 ACACGCACGCACTACAAAAAG 60.268 47.619 0.00 0.00 0.00 2.27
701 721 1.004398 CACGCACGCACTACAAAAAGA 60.004 47.619 0.00 0.00 0.00 2.52
702 722 1.871039 ACGCACGCACTACAAAAAGAT 59.129 42.857 0.00 0.00 0.00 2.40
703 723 2.233355 CGCACGCACTACAAAAAGATG 58.767 47.619 0.00 0.00 0.00 2.90
704 724 2.584791 GCACGCACTACAAAAAGATGG 58.415 47.619 0.00 0.00 0.00 3.51
705 725 2.668279 GCACGCACTACAAAAAGATGGG 60.668 50.000 0.00 0.00 0.00 4.00
706 726 1.539827 ACGCACTACAAAAAGATGGGC 59.460 47.619 0.00 0.00 0.00 5.36
707 727 1.812571 CGCACTACAAAAAGATGGGCT 59.187 47.619 0.00 0.00 0.00 5.19
708 728 2.414559 CGCACTACAAAAAGATGGGCTG 60.415 50.000 0.00 0.00 0.00 4.85
709 729 2.094545 GCACTACAAAAAGATGGGCTGG 60.095 50.000 0.00 0.00 0.00 4.85
710 730 3.420893 CACTACAAAAAGATGGGCTGGA 58.579 45.455 0.00 0.00 0.00 3.86
711 731 4.019174 CACTACAAAAAGATGGGCTGGAT 58.981 43.478 0.00 0.00 0.00 3.41
712 732 4.019174 ACTACAAAAAGATGGGCTGGATG 58.981 43.478 0.00 0.00 0.00 3.51
713 733 2.893424 ACAAAAAGATGGGCTGGATGT 58.107 42.857 0.00 0.00 0.00 3.06
714 734 3.242011 ACAAAAAGATGGGCTGGATGTT 58.758 40.909 0.00 0.00 0.00 2.71
715 735 3.647590 ACAAAAAGATGGGCTGGATGTTT 59.352 39.130 0.00 0.00 0.00 2.83
716 736 4.102996 ACAAAAAGATGGGCTGGATGTTTT 59.897 37.500 0.00 0.00 29.96 2.43
717 737 4.980339 AAAAGATGGGCTGGATGTTTTT 57.020 36.364 0.00 0.00 0.00 1.94
868 897 1.592743 CCATCGGTCCCGTGTTACA 59.407 57.895 5.52 0.00 40.74 2.41
877 906 0.108329 CCCGTGTTACACTAGGGCAG 60.108 60.000 13.94 0.00 35.09 4.85
1017 1049 2.039624 ATGTCTCCCCTGGCGTCT 59.960 61.111 0.00 0.00 0.00 4.18
1029 1061 4.884257 GCGTCTATGGCGGCGGAA 62.884 66.667 9.78 0.00 0.00 4.30
1042 1074 1.425428 GCGGAATTGGTTGAGCTCG 59.575 57.895 9.64 0.00 0.00 5.03
1084 1116 1.722677 GGAGACCTGCTCGACTACG 59.277 63.158 0.00 0.00 44.91 3.51
1101 1133 2.665185 GTCCGCTTCCGTGCAGTT 60.665 61.111 0.00 0.00 0.00 3.16
1305 1337 2.125753 CACTGCGTCCTCTGCTCC 60.126 66.667 0.00 0.00 0.00 4.70
1350 1382 2.325082 GCAACACGGCGACCAAGAT 61.325 57.895 16.62 0.00 0.00 2.40
1425 1457 1.066454 CCAGTCACGTATCGCACCATA 59.934 52.381 0.00 0.00 0.00 2.74
1519 1551 1.004200 ACCGCCTCCTTAACCGTTG 60.004 57.895 0.00 0.00 0.00 4.10
1531 1563 2.030562 CCGTTGACGCTGAAGGGT 59.969 61.111 0.00 0.00 44.25 4.34
1534 1566 0.878523 CGTTGACGCTGAAGGGTTCA 60.879 55.000 1.21 0.00 41.50 3.18
1590 1622 0.685785 TGCTCTTTGCCACCACCAAA 60.686 50.000 0.00 0.00 42.00 3.28
1619 1651 2.030027 TGGAGATTATCGGCCTGGAT 57.970 50.000 0.00 0.00 0.00 3.41
1660 1692 4.516698 GCACCATATCATCACGAGGAAAAT 59.483 41.667 0.00 0.00 0.00 1.82
1677 1709 7.060174 CGAGGAAAATTTTACATGTTACAACCG 59.940 37.037 15.51 0.20 0.00 4.44
1729 1764 2.052690 CAGATCGACCCACCTCGGT 61.053 63.158 0.00 0.00 39.49 4.69
2395 2451 4.123506 TCATTTCACAGTTGTGCGTCTAA 58.876 39.130 7.38 0.00 45.25 2.10
2402 2458 3.244078 ACAGTTGTGCGTCTAATCTTCCA 60.244 43.478 0.00 0.00 0.00 3.53
2425 2482 6.127366 CCAATACATGCAAAGGTGTAGGAAAT 60.127 38.462 4.38 0.00 34.60 2.17
2450 2507 7.613551 AATGTACCGATCTTTATTACTCCCT 57.386 36.000 0.00 0.00 0.00 4.20
2451 2508 6.645790 TGTACCGATCTTTATTACTCCCTC 57.354 41.667 0.00 0.00 0.00 4.30
2452 2509 5.537674 TGTACCGATCTTTATTACTCCCTCC 59.462 44.000 0.00 0.00 0.00 4.30
2453 2510 3.573110 ACCGATCTTTATTACTCCCTCCG 59.427 47.826 0.00 0.00 0.00 4.63
2454 2511 3.573110 CCGATCTTTATTACTCCCTCCGT 59.427 47.826 0.00 0.00 0.00 4.69
2455 2512 4.038883 CCGATCTTTATTACTCCCTCCGTT 59.961 45.833 0.00 0.00 0.00 4.44
2456 2513 5.221130 CGATCTTTATTACTCCCTCCGTTC 58.779 45.833 0.00 0.00 0.00 3.95
2466 2523 7.530426 TTACTCCCTCCGTTCCTAAATATAC 57.470 40.000 0.00 0.00 0.00 1.47
2491 2548 9.673454 ACGTCTTTTTAGACATTTTAAATGGAC 57.327 29.630 20.00 13.63 38.65 4.02
2560 2617 8.570488 TCACTCTTTTTACTTCGTATGTAGTCA 58.430 33.333 0.00 0.00 0.00 3.41
2561 2618 9.355215 CACTCTTTTTACTTCGTATGTAGTCAT 57.645 33.333 0.00 0.00 38.00 3.06
2582 2749 9.434420 AGTCATTTGTTGAATCTCTAGAAAGAG 57.566 33.333 0.00 0.00 42.51 2.85
2607 2774 8.218488 AGTTATATTTGGAAATGGAGGGAGTAC 58.782 37.037 0.00 0.00 0.00 2.73
2708 2926 8.564574 TCGTTATATTTGTTCTGTTTGCTCTTT 58.435 29.630 0.00 0.00 0.00 2.52
2709 2927 9.180678 CGTTATATTTGTTCTGTTTGCTCTTTT 57.819 29.630 0.00 0.00 0.00 2.27
2741 2959 0.531200 CTCGGCCGGGTATTCCTATC 59.469 60.000 27.83 0.00 0.00 2.08
2753 3196 8.414778 CCGGGTATTCCTATCTGTATATTCTTC 58.585 40.741 0.00 0.00 0.00 2.87
2833 3276 0.817654 GGCCCGTTACGTACCTTACT 59.182 55.000 3.52 0.00 0.00 2.24
2902 3345 6.939730 ACACATTTCACTATGGACAACATACA 59.060 34.615 0.00 0.00 41.03 2.29
2906 3349 7.848223 TTTCACTATGGACAACATACAGATG 57.152 36.000 0.00 0.00 41.03 2.90
2954 3397 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2960 3403 2.851263 TTTTGCTCCGTATGTGGTCT 57.149 45.000 0.00 0.00 0.00 3.85
2971 3414 5.475909 TCCGTATGTGGTCTATAGTGGAATC 59.524 44.000 0.00 0.00 0.00 2.52
2975 3418 7.040340 CGTATGTGGTCTATAGTGGAATCTCTT 60.040 40.741 0.00 0.00 0.00 2.85
2985 3428 9.311916 CTATAGTGGAATCTCTTCAAAGACTTG 57.688 37.037 0.00 0.00 32.70 3.16
2989 3432 8.816894 AGTGGAATCTCTTCAAAGACTTGTATA 58.183 33.333 0.00 0.00 33.94 1.47
2998 3441 8.963725 TCTTCAAAGACTTGTATATAGGAACGA 58.036 33.333 0.00 0.00 33.94 3.85
3001 3444 8.746530 TCAAAGACTTGTATATAGGAACGAAGT 58.253 33.333 0.00 0.00 36.52 3.01
3006 3449 8.743085 ACTTGTATATAGGAACGAAGTGAGTA 57.257 34.615 0.00 0.00 45.00 2.59
3020 3463 3.353557 AGTGAGTAGATGTCCGCTAACA 58.646 45.455 0.00 0.00 0.00 2.41
3027 3470 4.156455 AGATGTCCGCTAACATTCCATT 57.844 40.909 2.79 0.00 39.93 3.16
3047 3490 1.291877 CCGTTTGCTCTCCCGTTCTG 61.292 60.000 0.00 0.00 0.00 3.02
3049 3492 1.673033 CGTTTGCTCTCCCGTTCTGAT 60.673 52.381 0.00 0.00 0.00 2.90
3062 3505 5.588648 TCCCGTTCTGATGGTCAAATTTATC 59.411 40.000 0.00 0.00 0.00 1.75
3076 3519 6.144886 GTCAAATTTATCACGGGAAACAAACC 59.855 38.462 0.00 0.00 0.00 3.27
3093 3536 8.974060 AAACAAACCTACTCTTTCAGATAACA 57.026 30.769 0.00 0.00 0.00 2.41
3103 3546 7.051000 ACTCTTTCAGATAACATTTAGGGCTC 58.949 38.462 0.00 0.00 0.00 4.70
3114 3557 3.426787 TTTAGGGCTCATTCGGTTTGA 57.573 42.857 0.00 0.00 0.00 2.69
3150 3593 8.860780 AACGTAGGAATTAGGAGTAGTATAGG 57.139 38.462 0.00 0.00 0.00 2.57
3195 3638 4.530875 CATCCTAAGGAATTGACTTGCCT 58.469 43.478 0.00 0.00 34.34 4.75
3198 3641 2.568623 AAGGAATTGACTTGCCTCGT 57.431 45.000 0.00 0.00 0.00 4.18
3199 3642 2.568623 AGGAATTGACTTGCCTCGTT 57.431 45.000 0.00 0.00 0.00 3.85
3200 3643 2.427506 AGGAATTGACTTGCCTCGTTC 58.572 47.619 0.00 0.00 0.00 3.95
3201 3644 1.468914 GGAATTGACTTGCCTCGTTCC 59.531 52.381 0.00 0.00 0.00 3.62
3202 3645 2.427506 GAATTGACTTGCCTCGTTCCT 58.572 47.619 0.00 0.00 0.00 3.36
3203 3646 3.596214 GAATTGACTTGCCTCGTTCCTA 58.404 45.455 0.00 0.00 0.00 2.94
3204 3647 2.450609 TTGACTTGCCTCGTTCCTAC 57.549 50.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.121689 TAGTGGTGGGGGTGGCTT 60.122 61.111 0.00 0.00 0.00 4.35
1 2 2.610859 CTAGTGGTGGGGGTGGCT 60.611 66.667 0.00 0.00 0.00 4.75
2 3 2.609610 TCTAGTGGTGGGGGTGGC 60.610 66.667 0.00 0.00 0.00 5.01
3 4 0.042131 TAGTCTAGTGGTGGGGGTGG 59.958 60.000 0.00 0.00 0.00 4.61
4 5 1.486211 CTAGTCTAGTGGTGGGGGTG 58.514 60.000 0.00 0.00 0.00 4.61
5 6 0.338814 CCTAGTCTAGTGGTGGGGGT 59.661 60.000 6.15 0.00 0.00 4.95
6 7 0.398664 CCCTAGTCTAGTGGTGGGGG 60.399 65.000 6.15 0.00 0.00 5.40
7 8 0.398664 CCCCTAGTCTAGTGGTGGGG 60.399 65.000 14.73 14.73 46.89 4.96
8 9 0.398664 CCCCCTAGTCTAGTGGTGGG 60.399 65.000 7.53 9.19 34.68 4.61
9 10 1.049289 GCCCCCTAGTCTAGTGGTGG 61.049 65.000 7.53 10.65 0.00 4.61
10 11 0.032017 AGCCCCCTAGTCTAGTGGTG 60.032 60.000 7.53 1.25 0.00 4.17
11 12 0.262285 GAGCCCCCTAGTCTAGTGGT 59.738 60.000 7.53 1.16 0.00 4.16
12 13 0.558712 AGAGCCCCCTAGTCTAGTGG 59.441 60.000 6.15 3.83 0.00 4.00
13 14 2.463047 AAGAGCCCCCTAGTCTAGTG 57.537 55.000 6.15 0.00 0.00 2.74
14 15 3.013073 AGAAAAGAGCCCCCTAGTCTAGT 59.987 47.826 6.15 0.00 0.00 2.57
15 16 3.386402 CAGAAAAGAGCCCCCTAGTCTAG 59.614 52.174 0.00 0.00 0.00 2.43
16 17 3.375699 CAGAAAAGAGCCCCCTAGTCTA 58.624 50.000 0.00 0.00 0.00 2.59
17 18 2.192263 CAGAAAAGAGCCCCCTAGTCT 58.808 52.381 0.00 0.00 0.00 3.24
18 19 1.407575 GCAGAAAAGAGCCCCCTAGTC 60.408 57.143 0.00 0.00 0.00 2.59
19 20 0.621082 GCAGAAAAGAGCCCCCTAGT 59.379 55.000 0.00 0.00 0.00 2.57
20 21 0.915364 AGCAGAAAAGAGCCCCCTAG 59.085 55.000 0.00 0.00 0.00 3.02
21 22 1.838077 GTAGCAGAAAAGAGCCCCCTA 59.162 52.381 0.00 0.00 0.00 3.53
22 23 0.621082 GTAGCAGAAAAGAGCCCCCT 59.379 55.000 0.00 0.00 0.00 4.79
23 24 0.394488 GGTAGCAGAAAAGAGCCCCC 60.394 60.000 0.00 0.00 0.00 5.40
24 25 0.621082 AGGTAGCAGAAAAGAGCCCC 59.379 55.000 0.00 0.00 0.00 5.80
25 26 1.557371 AGAGGTAGCAGAAAAGAGCCC 59.443 52.381 0.00 0.00 0.00 5.19
26 27 2.499693 AGAGAGGTAGCAGAAAAGAGCC 59.500 50.000 0.00 0.00 0.00 4.70
27 28 3.447229 AGAGAGAGGTAGCAGAAAAGAGC 59.553 47.826 0.00 0.00 0.00 4.09
28 29 4.949856 AGAGAGAGAGGTAGCAGAAAAGAG 59.050 45.833 0.00 0.00 0.00 2.85
29 30 4.929479 AGAGAGAGAGGTAGCAGAAAAGA 58.071 43.478 0.00 0.00 0.00 2.52
30 31 4.949856 AGAGAGAGAGAGGTAGCAGAAAAG 59.050 45.833 0.00 0.00 0.00 2.27
31 32 4.929479 AGAGAGAGAGAGGTAGCAGAAAA 58.071 43.478 0.00 0.00 0.00 2.29
32 33 4.584638 AGAGAGAGAGAGGTAGCAGAAA 57.415 45.455 0.00 0.00 0.00 2.52
33 34 4.719773 ACTAGAGAGAGAGAGGTAGCAGAA 59.280 45.833 0.00 0.00 0.00 3.02
34 35 4.295201 ACTAGAGAGAGAGAGGTAGCAGA 58.705 47.826 0.00 0.00 0.00 4.26
35 36 4.345257 AGACTAGAGAGAGAGAGGTAGCAG 59.655 50.000 0.00 0.00 0.00 4.24
36 37 4.295201 AGACTAGAGAGAGAGAGGTAGCA 58.705 47.826 0.00 0.00 0.00 3.49
37 38 4.344102 TGAGACTAGAGAGAGAGAGGTAGC 59.656 50.000 0.00 0.00 0.00 3.58
38 39 5.011125 CCTGAGACTAGAGAGAGAGAGGTAG 59.989 52.000 0.00 0.00 0.00 3.18
39 40 4.899457 CCTGAGACTAGAGAGAGAGAGGTA 59.101 50.000 0.00 0.00 0.00 3.08
40 41 3.711704 CCTGAGACTAGAGAGAGAGAGGT 59.288 52.174 0.00 0.00 0.00 3.85
41 42 3.967326 TCCTGAGACTAGAGAGAGAGAGG 59.033 52.174 0.00 0.00 0.00 3.69
42 43 4.950050 GTCCTGAGACTAGAGAGAGAGAG 58.050 52.174 0.00 0.00 40.10 3.20
51 52 7.895476 GCCTGAGCTAAGTCCTGAGACTAGA 62.895 52.000 0.00 0.00 44.01 2.43
52 53 5.756734 GCCTGAGCTAAGTCCTGAGACTAG 61.757 54.167 0.00 0.00 44.01 2.57
53 54 3.937739 GCCTGAGCTAAGTCCTGAGACTA 60.938 52.174 0.00 0.00 44.01 2.59
54 55 3.210863 GCCTGAGCTAAGTCCTGAGACT 61.211 54.545 0.00 0.00 45.59 3.24
55 56 1.136110 GCCTGAGCTAAGTCCTGAGAC 59.864 57.143 0.00 0.00 38.59 3.36
56 57 1.272704 TGCCTGAGCTAAGTCCTGAGA 60.273 52.381 0.00 0.00 40.80 3.27
57 58 1.189752 TGCCTGAGCTAAGTCCTGAG 58.810 55.000 0.00 0.00 40.80 3.35
58 59 1.483827 CATGCCTGAGCTAAGTCCTGA 59.516 52.381 0.00 0.00 40.80 3.86
59 60 1.474677 CCATGCCTGAGCTAAGTCCTG 60.475 57.143 0.00 0.00 40.80 3.86
60 61 0.835941 CCATGCCTGAGCTAAGTCCT 59.164 55.000 0.00 0.00 40.80 3.85
61 62 0.179034 CCCATGCCTGAGCTAAGTCC 60.179 60.000 0.00 0.00 40.80 3.85
62 63 0.179034 CCCCATGCCTGAGCTAAGTC 60.179 60.000 0.00 0.00 40.80 3.01
63 64 0.621571 TCCCCATGCCTGAGCTAAGT 60.622 55.000 0.00 0.00 40.80 2.24
64 65 0.769873 ATCCCCATGCCTGAGCTAAG 59.230 55.000 0.00 0.00 40.80 2.18
65 66 0.767375 GATCCCCATGCCTGAGCTAA 59.233 55.000 0.00 0.00 40.80 3.09
66 67 1.130054 GGATCCCCATGCCTGAGCTA 61.130 60.000 0.00 0.00 40.80 3.32
67 68 2.459086 GGATCCCCATGCCTGAGCT 61.459 63.158 0.00 0.00 40.80 4.09
68 69 2.114838 GGATCCCCATGCCTGAGC 59.885 66.667 0.00 0.00 40.48 4.26
69 70 1.987807 AACGGATCCCCATGCCTGAG 61.988 60.000 6.06 0.00 0.00 3.35
70 71 1.983119 GAACGGATCCCCATGCCTGA 61.983 60.000 6.06 0.00 0.00 3.86
71 72 1.526917 GAACGGATCCCCATGCCTG 60.527 63.158 6.06 0.00 0.00 4.85
72 73 1.694169 AGAACGGATCCCCATGCCT 60.694 57.895 6.06 0.00 0.00 4.75
73 74 1.227973 GAGAACGGATCCCCATGCC 60.228 63.158 6.06 0.00 0.00 4.40
74 75 1.227973 GGAGAACGGATCCCCATGC 60.228 63.158 6.06 0.00 0.00 4.06
75 76 0.394565 GAGGAGAACGGATCCCCATG 59.605 60.000 6.06 0.00 37.57 3.66
76 77 0.266152 AGAGGAGAACGGATCCCCAT 59.734 55.000 6.06 0.00 37.57 4.00
77 78 0.397254 GAGAGGAGAACGGATCCCCA 60.397 60.000 6.06 0.00 37.57 4.96
78 79 0.105913 AGAGAGGAGAACGGATCCCC 60.106 60.000 6.06 0.36 37.57 4.81
79 80 1.324383 GAGAGAGGAGAACGGATCCC 58.676 60.000 6.06 0.00 37.57 3.85
80 81 0.948678 CGAGAGAGGAGAACGGATCC 59.051 60.000 0.00 0.00 37.07 3.36
81 82 0.309612 GCGAGAGAGGAGAACGGATC 59.690 60.000 0.00 0.00 0.00 3.36
82 83 0.394488 TGCGAGAGAGGAGAACGGAT 60.394 55.000 0.00 0.00 0.00 4.18
83 84 0.394488 ATGCGAGAGAGGAGAACGGA 60.394 55.000 0.00 0.00 0.00 4.69
84 85 1.002251 GTATGCGAGAGAGGAGAACGG 60.002 57.143 0.00 0.00 0.00 4.44
85 86 1.671328 TGTATGCGAGAGAGGAGAACG 59.329 52.381 0.00 0.00 0.00 3.95
86 87 4.047822 CAATGTATGCGAGAGAGGAGAAC 58.952 47.826 0.00 0.00 0.00 3.01
87 88 3.701542 ACAATGTATGCGAGAGAGGAGAA 59.298 43.478 0.00 0.00 0.00 2.87
88 89 3.291584 ACAATGTATGCGAGAGAGGAGA 58.708 45.455 0.00 0.00 0.00 3.71
89 90 3.724508 ACAATGTATGCGAGAGAGGAG 57.275 47.619 0.00 0.00 0.00 3.69
90 91 5.536538 AGATTACAATGTATGCGAGAGAGGA 59.463 40.000 0.00 0.00 0.00 3.71
91 92 5.777802 AGATTACAATGTATGCGAGAGAGG 58.222 41.667 0.00 0.00 0.00 3.69
92 93 5.861251 GGAGATTACAATGTATGCGAGAGAG 59.139 44.000 0.00 0.00 0.00 3.20
93 94 5.562890 CGGAGATTACAATGTATGCGAGAGA 60.563 44.000 1.09 0.00 0.00 3.10
94 95 4.618912 CGGAGATTACAATGTATGCGAGAG 59.381 45.833 1.09 0.00 0.00 3.20
95 96 4.546570 CGGAGATTACAATGTATGCGAGA 58.453 43.478 1.09 0.00 0.00 4.04
96 97 3.675225 CCGGAGATTACAATGTATGCGAG 59.325 47.826 0.00 0.00 0.00 5.03
97 98 3.319689 TCCGGAGATTACAATGTATGCGA 59.680 43.478 0.00 0.00 0.00 5.10
98 99 3.649073 TCCGGAGATTACAATGTATGCG 58.351 45.455 0.00 0.00 0.00 4.73
99 100 6.163476 TGTATCCGGAGATTACAATGTATGC 58.837 40.000 11.34 0.00 33.67 3.14
100 101 9.302345 GTATGTATCCGGAGATTACAATGTATG 57.698 37.037 17.88 0.00 33.67 2.39
101 102 9.256228 AGTATGTATCCGGAGATTACAATGTAT 57.744 33.333 17.88 6.31 33.67 2.29
102 103 8.645814 AGTATGTATCCGGAGATTACAATGTA 57.354 34.615 17.88 6.09 33.67 2.29
103 104 7.540474 AGTATGTATCCGGAGATTACAATGT 57.460 36.000 17.88 6.92 33.67 2.71
104 105 6.747739 CGAGTATGTATCCGGAGATTACAATG 59.252 42.308 17.88 7.03 33.67 2.82
105 106 6.127703 CCGAGTATGTATCCGGAGATTACAAT 60.128 42.308 17.88 9.04 44.29 2.71
106 107 5.182570 CCGAGTATGTATCCGGAGATTACAA 59.817 44.000 17.88 7.26 44.29 2.41
107 108 4.698780 CCGAGTATGTATCCGGAGATTACA 59.301 45.833 16.63 16.63 44.29 2.41
108 109 4.940046 TCCGAGTATGTATCCGGAGATTAC 59.060 45.833 11.34 11.75 45.04 1.89
109 110 5.169992 TCCGAGTATGTATCCGGAGATTA 57.830 43.478 11.34 0.00 45.04 1.75
110 111 4.030314 TCCGAGTATGTATCCGGAGATT 57.970 45.455 11.34 0.00 45.04 2.40
111 112 3.715638 TCCGAGTATGTATCCGGAGAT 57.284 47.619 11.34 4.39 45.04 2.75
115 116 5.775686 TGTTTTATCCGAGTATGTATCCGG 58.224 41.667 0.00 0.00 43.02 5.14
116 117 7.568861 GCTTTGTTTTATCCGAGTATGTATCCG 60.569 40.741 0.00 0.00 0.00 4.18
117 118 7.307811 GGCTTTGTTTTATCCGAGTATGTATCC 60.308 40.741 0.00 0.00 0.00 2.59
118 119 7.441458 AGGCTTTGTTTTATCCGAGTATGTATC 59.559 37.037 0.00 0.00 0.00 2.24
119 120 7.280356 AGGCTTTGTTTTATCCGAGTATGTAT 58.720 34.615 0.00 0.00 0.00 2.29
120 121 6.646267 AGGCTTTGTTTTATCCGAGTATGTA 58.354 36.000 0.00 0.00 0.00 2.29
121 122 5.497474 AGGCTTTGTTTTATCCGAGTATGT 58.503 37.500 0.00 0.00 0.00 2.29
122 123 5.817816 AGAGGCTTTGTTTTATCCGAGTATG 59.182 40.000 0.00 0.00 0.00 2.39
123 124 5.990668 AGAGGCTTTGTTTTATCCGAGTAT 58.009 37.500 0.00 0.00 0.00 2.12
124 125 5.416271 AGAGGCTTTGTTTTATCCGAGTA 57.584 39.130 0.00 0.00 0.00 2.59
125 126 4.254492 GAGAGGCTTTGTTTTATCCGAGT 58.746 43.478 0.00 0.00 0.00 4.18
126 127 3.623510 GGAGAGGCTTTGTTTTATCCGAG 59.376 47.826 0.00 0.00 0.00 4.63
127 128 3.606687 GGAGAGGCTTTGTTTTATCCGA 58.393 45.455 0.00 0.00 0.00 4.55
128 129 2.351726 CGGAGAGGCTTTGTTTTATCCG 59.648 50.000 0.00 0.00 42.00 4.18
129 130 2.683362 CCGGAGAGGCTTTGTTTTATCC 59.317 50.000 0.00 0.00 0.00 2.59
130 131 3.606687 TCCGGAGAGGCTTTGTTTTATC 58.393 45.455 0.00 0.00 40.77 1.75
131 132 3.610911 CTCCGGAGAGGCTTTGTTTTAT 58.389 45.455 28.21 0.00 40.77 1.40
132 133 2.874457 GCTCCGGAGAGGCTTTGTTTTA 60.874 50.000 35.69 0.00 40.79 1.52
133 134 1.897560 CTCCGGAGAGGCTTTGTTTT 58.102 50.000 28.21 0.00 40.77 2.43
134 135 0.606673 GCTCCGGAGAGGCTTTGTTT 60.607 55.000 35.69 0.00 40.79 2.83
135 136 1.003233 GCTCCGGAGAGGCTTTGTT 60.003 57.895 35.69 0.00 40.79 2.83
136 137 2.217038 TGCTCCGGAGAGGCTTTGT 61.217 57.895 35.69 0.00 40.79 2.83
137 138 1.743252 GTGCTCCGGAGAGGCTTTG 60.743 63.158 35.69 7.23 40.79 2.77
138 139 2.665603 GTGCTCCGGAGAGGCTTT 59.334 61.111 35.69 0.00 40.79 3.51
139 140 3.764466 CGTGCTCCGGAGAGGCTT 61.764 66.667 35.69 0.00 40.79 4.35
140 141 4.742649 TCGTGCTCCGGAGAGGCT 62.743 66.667 35.69 0.00 40.79 4.58
141 142 4.200283 CTCGTGCTCCGGAGAGGC 62.200 72.222 35.69 21.27 40.79 4.70
142 143 2.438614 TCTCGTGCTCCGGAGAGG 60.439 66.667 35.69 22.77 40.79 3.69
143 144 2.795297 GTCTCGTGCTCCGGAGAG 59.205 66.667 35.69 22.55 43.57 3.20
144 145 2.511545 TACGTCTCGTGCTCCGGAGA 62.512 60.000 35.69 17.11 41.39 3.71
145 146 2.037913 CTACGTCTCGTGCTCCGGAG 62.038 65.000 27.83 27.83 41.39 4.63
146 147 2.046988 TACGTCTCGTGCTCCGGA 60.047 61.111 2.93 2.93 41.39 5.14
147 148 2.403987 CTACGTCTCGTGCTCCGG 59.596 66.667 0.00 0.00 41.39 5.14
148 149 2.403987 CCTACGTCTCGTGCTCCG 59.596 66.667 0.00 0.00 41.39 4.63
149 150 1.593296 AACCCTACGTCTCGTGCTCC 61.593 60.000 0.00 0.00 41.39 4.70
150 151 0.456312 CAACCCTACGTCTCGTGCTC 60.456 60.000 0.00 0.00 41.39 4.26
151 152 1.177256 ACAACCCTACGTCTCGTGCT 61.177 55.000 0.00 0.00 41.39 4.40
152 153 0.319297 AACAACCCTACGTCTCGTGC 60.319 55.000 0.00 0.00 41.39 5.34
153 154 2.995466 TAACAACCCTACGTCTCGTG 57.005 50.000 0.00 0.00 41.39 4.35
154 155 3.350833 AGATAACAACCCTACGTCTCGT 58.649 45.455 0.00 0.00 44.35 4.18
155 156 3.243002 GGAGATAACAACCCTACGTCTCG 60.243 52.174 0.00 0.00 33.28 4.04
156 157 3.698040 TGGAGATAACAACCCTACGTCTC 59.302 47.826 0.00 0.00 0.00 3.36
157 158 3.705051 TGGAGATAACAACCCTACGTCT 58.295 45.455 0.00 0.00 0.00 4.18
158 159 4.618965 GATGGAGATAACAACCCTACGTC 58.381 47.826 0.00 0.00 0.00 4.34
159 160 3.067742 CGATGGAGATAACAACCCTACGT 59.932 47.826 0.00 0.00 0.00 3.57
160 161 3.067742 ACGATGGAGATAACAACCCTACG 59.932 47.826 0.00 0.00 0.00 3.51
161 162 4.098960 TCACGATGGAGATAACAACCCTAC 59.901 45.833 0.00 0.00 0.00 3.18
162 163 4.283337 TCACGATGGAGATAACAACCCTA 58.717 43.478 0.00 0.00 0.00 3.53
163 164 3.104512 TCACGATGGAGATAACAACCCT 58.895 45.455 0.00 0.00 0.00 4.34
164 165 3.132289 TCTCACGATGGAGATAACAACCC 59.868 47.826 0.00 0.00 38.95 4.11
165 166 4.363999 CTCTCACGATGGAGATAACAACC 58.636 47.826 6.65 0.00 42.69 3.77
166 167 4.363999 CCTCTCACGATGGAGATAACAAC 58.636 47.826 6.65 0.00 42.69 3.32
167 168 3.181475 GCCTCTCACGATGGAGATAACAA 60.181 47.826 6.65 0.00 42.69 2.83
168 169 2.362397 GCCTCTCACGATGGAGATAACA 59.638 50.000 6.65 0.00 42.69 2.41
169 170 2.288518 GGCCTCTCACGATGGAGATAAC 60.289 54.545 0.00 1.49 42.69 1.89
170 171 1.964223 GGCCTCTCACGATGGAGATAA 59.036 52.381 0.00 0.00 42.69 1.75
171 172 1.621992 GGCCTCTCACGATGGAGATA 58.378 55.000 0.00 0.00 42.69 1.98
172 173 1.118356 GGGCCTCTCACGATGGAGAT 61.118 60.000 0.84 0.00 42.69 2.75
173 174 1.758514 GGGCCTCTCACGATGGAGA 60.759 63.158 0.84 0.00 41.47 3.71
174 175 2.818132 GGGCCTCTCACGATGGAG 59.182 66.667 0.84 0.00 36.21 3.86
175 176 3.147595 CGGGCCTCTCACGATGGA 61.148 66.667 0.84 0.00 0.00 3.41
176 177 2.721167 TTCGGGCCTCTCACGATGG 61.721 63.158 0.84 0.00 36.43 3.51
177 178 1.519455 GTTCGGGCCTCTCACGATG 60.519 63.158 0.84 0.00 36.43 3.84
178 179 1.668101 GAGTTCGGGCCTCTCACGAT 61.668 60.000 0.84 0.00 36.43 3.73
179 180 2.282958 AGTTCGGGCCTCTCACGA 60.283 61.111 0.84 0.00 34.47 4.35
180 181 2.182030 GAGTTCGGGCCTCTCACG 59.818 66.667 0.84 0.00 0.00 4.35
181 182 2.182030 CGAGTTCGGGCCTCTCAC 59.818 66.667 0.84 0.00 35.37 3.51
182 183 2.831894 TAGCGAGTTCGGGCCTCTCA 62.832 60.000 0.84 0.19 40.23 3.27
183 184 1.664321 TTAGCGAGTTCGGGCCTCTC 61.664 60.000 0.84 6.09 40.23 3.20
184 185 1.255667 TTTAGCGAGTTCGGGCCTCT 61.256 55.000 0.84 0.00 40.23 3.69
185 186 0.390735 TTTTAGCGAGTTCGGGCCTC 60.391 55.000 0.84 0.00 40.23 4.70
186 187 0.672711 GTTTTAGCGAGTTCGGGCCT 60.673 55.000 0.84 0.00 40.23 5.19
187 188 1.642037 GGTTTTAGCGAGTTCGGGCC 61.642 60.000 0.00 0.00 40.23 5.80
188 189 0.952010 TGGTTTTAGCGAGTTCGGGC 60.952 55.000 3.50 0.00 40.23 6.13
189 190 0.794473 GTGGTTTTAGCGAGTTCGGG 59.206 55.000 3.50 0.00 40.23 5.14
190 191 0.794473 GGTGGTTTTAGCGAGTTCGG 59.206 55.000 3.50 0.00 40.23 4.30
191 192 0.437295 CGGTGGTTTTAGCGAGTTCG 59.563 55.000 0.00 0.00 43.66 3.95
192 193 1.193874 CACGGTGGTTTTAGCGAGTTC 59.806 52.381 0.00 0.00 43.66 3.01
193 194 1.223187 CACGGTGGTTTTAGCGAGTT 58.777 50.000 0.00 0.00 43.66 3.01
194 195 0.105408 ACACGGTGGTTTTAGCGAGT 59.895 50.000 13.48 0.00 43.66 4.18
195 196 0.788391 GACACGGTGGTTTTAGCGAG 59.212 55.000 13.48 0.00 43.66 5.03
196 197 0.104487 TGACACGGTGGTTTTAGCGA 59.896 50.000 13.48 0.00 43.66 4.93
197 198 0.233848 GTGACACGGTGGTTTTAGCG 59.766 55.000 13.48 0.00 46.10 4.26
198 199 0.589708 GGTGACACGGTGGTTTTAGC 59.410 55.000 13.48 0.11 0.00 3.09
199 200 1.232119 GGGTGACACGGTGGTTTTAG 58.768 55.000 13.48 0.00 0.00 1.85
200 201 0.545171 TGGGTGACACGGTGGTTTTA 59.455 50.000 13.48 0.00 0.00 1.52
201 202 0.106419 ATGGGTGACACGGTGGTTTT 60.106 50.000 13.48 0.00 0.00 2.43
202 203 0.106419 AATGGGTGACACGGTGGTTT 60.106 50.000 13.48 0.00 0.00 3.27
203 204 0.106419 AAATGGGTGACACGGTGGTT 60.106 50.000 13.48 0.00 0.00 3.67
204 205 0.821711 CAAATGGGTGACACGGTGGT 60.822 55.000 13.48 0.00 0.00 4.16
205 206 1.956043 CAAATGGGTGACACGGTGG 59.044 57.895 13.48 0.00 0.00 4.61
206 207 1.285641 GCAAATGGGTGACACGGTG 59.714 57.895 6.58 6.58 0.00 4.94
207 208 0.539438 ATGCAAATGGGTGACACGGT 60.539 50.000 0.00 0.00 0.00 4.83
208 209 0.171007 GATGCAAATGGGTGACACGG 59.829 55.000 0.00 0.00 0.00 4.94
209 210 1.131126 GAGATGCAAATGGGTGACACG 59.869 52.381 0.00 0.00 0.00 4.49
210 211 1.131126 CGAGATGCAAATGGGTGACAC 59.869 52.381 0.00 0.00 0.00 3.67
211 212 1.003003 TCGAGATGCAAATGGGTGACA 59.997 47.619 0.00 0.00 0.00 3.58
212 213 1.737838 TCGAGATGCAAATGGGTGAC 58.262 50.000 0.00 0.00 0.00 3.67
213 214 2.715749 ATCGAGATGCAAATGGGTGA 57.284 45.000 0.00 0.00 0.00 4.02
214 215 3.732212 TCTATCGAGATGCAAATGGGTG 58.268 45.455 0.00 0.00 0.00 4.61
215 216 4.040829 TGATCTATCGAGATGCAAATGGGT 59.959 41.667 0.00 0.00 42.80 4.51
216 217 4.572909 TGATCTATCGAGATGCAAATGGG 58.427 43.478 0.00 0.00 42.80 4.00
217 218 5.447413 GCATGATCTATCGAGATGCAAATGG 60.447 44.000 0.00 0.00 42.80 3.16
218 219 5.351740 AGCATGATCTATCGAGATGCAAATG 59.648 40.000 12.73 0.00 42.80 2.32
219 220 5.489249 AGCATGATCTATCGAGATGCAAAT 58.511 37.500 12.73 0.00 42.80 2.32
220 221 4.891260 AGCATGATCTATCGAGATGCAAA 58.109 39.130 12.73 0.00 42.80 3.68
221 222 4.492611 GAGCATGATCTATCGAGATGCAA 58.507 43.478 3.07 0.00 42.80 4.08
222 223 3.119209 GGAGCATGATCTATCGAGATGCA 60.119 47.826 11.34 0.00 42.80 3.96
223 224 3.130869 AGGAGCATGATCTATCGAGATGC 59.869 47.826 11.34 4.25 42.80 3.91
224 225 4.987408 AGGAGCATGATCTATCGAGATG 57.013 45.455 11.34 0.00 42.80 2.90
225 226 5.999205 AAAGGAGCATGATCTATCGAGAT 57.001 39.130 11.34 0.00 45.59 2.75
226 227 5.184096 GGTAAAGGAGCATGATCTATCGAGA 59.816 44.000 11.34 0.00 35.71 4.04
227 228 5.406649 GGTAAAGGAGCATGATCTATCGAG 58.593 45.833 11.34 0.00 0.00 4.04
228 229 4.220821 GGGTAAAGGAGCATGATCTATCGA 59.779 45.833 11.34 0.00 0.00 3.59
229 230 4.221703 AGGGTAAAGGAGCATGATCTATCG 59.778 45.833 11.34 0.00 0.00 2.92
230 231 5.753721 AGGGTAAAGGAGCATGATCTATC 57.246 43.478 11.34 0.00 0.00 2.08
231 232 6.385467 GGATAGGGTAAAGGAGCATGATCTAT 59.615 42.308 11.34 0.00 0.00 1.98
232 233 5.721960 GGATAGGGTAAAGGAGCATGATCTA 59.278 44.000 11.34 0.00 0.00 1.98
233 234 4.534103 GGATAGGGTAAAGGAGCATGATCT 59.466 45.833 11.34 0.00 0.00 2.75
234 235 4.323868 GGGATAGGGTAAAGGAGCATGATC 60.324 50.000 1.26 1.26 0.00 2.92
235 236 3.589288 GGGATAGGGTAAAGGAGCATGAT 59.411 47.826 0.00 0.00 0.00 2.45
236 237 2.979678 GGGATAGGGTAAAGGAGCATGA 59.020 50.000 0.00 0.00 0.00 3.07
237 238 2.982488 AGGGATAGGGTAAAGGAGCATG 59.018 50.000 0.00 0.00 0.00 4.06
238 239 3.368921 AGGGATAGGGTAAAGGAGCAT 57.631 47.619 0.00 0.00 0.00 3.79
239 240 2.889522 AGGGATAGGGTAAAGGAGCA 57.110 50.000 0.00 0.00 0.00 4.26
240 241 5.844773 AATAAGGGATAGGGTAAAGGAGC 57.155 43.478 0.00 0.00 0.00 4.70
241 242 8.891501 ACAATAATAAGGGATAGGGTAAAGGAG 58.108 37.037 0.00 0.00 0.00 3.69
242 243 8.823810 ACAATAATAAGGGATAGGGTAAAGGA 57.176 34.615 0.00 0.00 0.00 3.36
243 244 7.822822 CGACAATAATAAGGGATAGGGTAAAGG 59.177 40.741 0.00 0.00 0.00 3.11
244 245 7.822822 CCGACAATAATAAGGGATAGGGTAAAG 59.177 40.741 0.00 0.00 0.00 1.85
245 246 7.513436 TCCGACAATAATAAGGGATAGGGTAAA 59.487 37.037 0.00 0.00 0.00 2.01
246 247 7.018150 TCCGACAATAATAAGGGATAGGGTAA 58.982 38.462 0.00 0.00 0.00 2.85
247 248 6.564099 TCCGACAATAATAAGGGATAGGGTA 58.436 40.000 0.00 0.00 0.00 3.69
248 249 5.408824 TCCGACAATAATAAGGGATAGGGT 58.591 41.667 0.00 0.00 0.00 4.34
249 250 6.368779 TTCCGACAATAATAAGGGATAGGG 57.631 41.667 0.00 0.00 0.00 3.53
250 251 6.757010 CGATTCCGACAATAATAAGGGATAGG 59.243 42.308 0.00 0.00 38.22 2.57
251 252 7.321153 ACGATTCCGACAATAATAAGGGATAG 58.679 38.462 0.00 0.00 39.50 2.08
252 253 7.235935 ACGATTCCGACAATAATAAGGGATA 57.764 36.000 0.00 0.00 39.50 2.59
253 254 6.110411 ACGATTCCGACAATAATAAGGGAT 57.890 37.500 0.00 0.00 39.50 3.85
254 255 5.540400 ACGATTCCGACAATAATAAGGGA 57.460 39.130 0.00 0.00 39.50 4.20
255 256 5.178809 GGAACGATTCCGACAATAATAAGGG 59.821 44.000 0.00 0.00 40.59 3.95
256 257 6.224420 GGAACGATTCCGACAATAATAAGG 57.776 41.667 0.00 0.00 40.59 2.69
270 271 0.515564 CGGTGTTGTGGGAACGATTC 59.484 55.000 0.00 0.00 0.00 2.52
271 272 1.512156 GCGGTGTTGTGGGAACGATT 61.512 55.000 0.00 0.00 0.00 3.34
272 273 1.964373 GCGGTGTTGTGGGAACGAT 60.964 57.895 0.00 0.00 0.00 3.73
273 274 2.589442 GCGGTGTTGTGGGAACGA 60.589 61.111 0.00 0.00 0.00 3.85
274 275 3.656045 GGCGGTGTTGTGGGAACG 61.656 66.667 0.00 0.00 0.00 3.95
275 276 3.656045 CGGCGGTGTTGTGGGAAC 61.656 66.667 0.00 0.00 0.00 3.62
314 315 4.333372 TCGAGTTTTGTTAGGGTTTGTGTC 59.667 41.667 0.00 0.00 0.00 3.67
338 339 3.130633 GGCTCCGTTTTTGCATCTTTTT 58.869 40.909 0.00 0.00 0.00 1.94
339 340 2.547855 GGGCTCCGTTTTTGCATCTTTT 60.548 45.455 0.00 0.00 0.00 2.27
340 341 1.000843 GGGCTCCGTTTTTGCATCTTT 59.999 47.619 0.00 0.00 0.00 2.52
341 342 0.603065 GGGCTCCGTTTTTGCATCTT 59.397 50.000 0.00 0.00 0.00 2.40
342 343 0.251341 AGGGCTCCGTTTTTGCATCT 60.251 50.000 0.00 0.00 0.00 2.90
343 344 0.171231 GAGGGCTCCGTTTTTGCATC 59.829 55.000 0.00 0.00 0.00 3.91
344 345 1.250840 GGAGGGCTCCGTTTTTGCAT 61.251 55.000 0.00 0.00 40.36 3.96
363 366 0.981277 ATCCCGACCCTTACTGGTGG 60.981 60.000 0.00 0.00 39.24 4.61
370 373 0.635009 AGAGTGGATCCCGACCCTTA 59.365 55.000 9.90 0.00 0.00 2.69
371 374 0.978146 CAGAGTGGATCCCGACCCTT 60.978 60.000 9.90 0.00 0.00 3.95
372 375 1.381872 CAGAGTGGATCCCGACCCT 60.382 63.158 9.90 0.00 0.00 4.34
373 376 3.095347 GCAGAGTGGATCCCGACCC 62.095 68.421 9.90 0.00 0.00 4.46
374 377 2.022240 GAGCAGAGTGGATCCCGACC 62.022 65.000 9.90 0.00 0.00 4.79
375 378 1.439644 GAGCAGAGTGGATCCCGAC 59.560 63.158 9.90 1.02 0.00 4.79
376 379 1.758514 GGAGCAGAGTGGATCCCGA 60.759 63.158 9.90 0.00 37.38 5.14
377 380 2.818132 GGAGCAGAGTGGATCCCG 59.182 66.667 9.90 0.00 37.38 5.14
379 382 0.108207 CATGGGAGCAGAGTGGATCC 59.892 60.000 4.20 4.20 42.62 3.36
380 383 0.108207 CCATGGGAGCAGAGTGGATC 59.892 60.000 2.85 0.00 31.59 3.36
389 392 2.773918 CCTAGGGCCATGGGAGCA 60.774 66.667 15.82 0.00 0.00 4.26
440 443 2.048222 TTTCTCTGCCACTCGCCG 60.048 61.111 0.00 0.00 36.24 6.46
446 449 0.615850 AGCTAGGGTTTCTCTGCCAC 59.384 55.000 0.00 0.00 0.00 5.01
447 450 1.831736 GTAGCTAGGGTTTCTCTGCCA 59.168 52.381 0.00 0.00 0.00 4.92
450 453 4.896482 ACCTATGTAGCTAGGGTTTCTCTG 59.104 45.833 5.27 0.00 42.29 3.35
453 456 4.880164 TCACCTATGTAGCTAGGGTTTCT 58.120 43.478 5.27 0.00 42.29 2.52
481 484 6.569179 AAAGCAATAACACAACGGAGTATT 57.431 33.333 0.00 0.00 45.00 1.89
482 485 6.569179 AAAAGCAATAACACAACGGAGTAT 57.431 33.333 0.00 0.00 45.00 2.12
483 486 6.380095 AAAAAGCAATAACACAACGGAGTA 57.620 33.333 0.00 0.00 45.00 2.59
510 513 2.151202 CATGTGTTTCCCGTAGCAAGT 58.849 47.619 0.00 0.00 0.00 3.16
511 514 2.095768 CACATGTGTTTCCCGTAGCAAG 60.096 50.000 18.03 0.00 0.00 4.01
512 515 1.876799 CACATGTGTTTCCCGTAGCAA 59.123 47.619 18.03 0.00 0.00 3.91
513 516 1.518325 CACATGTGTTTCCCGTAGCA 58.482 50.000 18.03 0.00 0.00 3.49
514 517 0.168128 GCACATGTGTTTCCCGTAGC 59.832 55.000 26.01 4.74 0.00 3.58
515 518 1.518325 TGCACATGTGTTTCCCGTAG 58.482 50.000 26.01 0.00 0.00 3.51
516 519 2.192664 ATGCACATGTGTTTCCCGTA 57.807 45.000 26.01 0.00 0.00 4.02
517 520 2.192664 TATGCACATGTGTTTCCCGT 57.807 45.000 26.01 12.99 0.00 5.28
518 521 2.223548 CCATATGCACATGTGTTTCCCG 60.224 50.000 26.01 11.13 0.00 5.14
565 570 9.158233 GGGCTAACGCACTAAAATAATATATGA 57.842 33.333 0.00 0.00 36.36 2.15
578 588 2.125832 GCACGGGCTAACGCACTA 60.126 61.111 0.00 0.00 37.43 2.74
596 606 3.003378 GGCTGTTTTTATCGGATACCTGC 59.997 47.826 0.00 2.78 0.00 4.85
604 614 1.543802 TGCAAGGGCTGTTTTTATCGG 59.456 47.619 0.00 0.00 41.91 4.18
608 618 1.068434 GCTGTGCAAGGGCTGTTTTTA 59.932 47.619 0.00 0.00 41.91 1.52
675 695 0.179250 GTAGTGCGTGCGTGTGATTG 60.179 55.000 0.00 0.00 0.00 2.67
689 709 3.420893 TCCAGCCCATCTTTTTGTAGTG 58.579 45.455 0.00 0.00 0.00 2.74
695 715 4.980339 AAAACATCCAGCCCATCTTTTT 57.020 36.364 0.00 0.00 0.00 1.94
696 716 4.980339 AAAAACATCCAGCCCATCTTTT 57.020 36.364 0.00 0.00 0.00 2.27
886 915 2.363680 CCAGATCGCAGATTGACCTAGT 59.636 50.000 0.00 0.00 45.12 2.57
993 1022 4.148825 AGGGGAGACATGTCGCGC 62.149 66.667 30.09 30.09 40.54 6.86
1017 1049 1.077357 AACCAATTCCGCCGCCATA 60.077 52.632 0.00 0.00 0.00 2.74
1029 1061 1.741770 GCCGACGAGCTCAACCAAT 60.742 57.895 15.40 0.00 0.00 3.16
1084 1116 2.251642 AAACTGCACGGAAGCGGAC 61.252 57.895 11.74 0.00 43.63 4.79
1305 1337 2.756283 AGGAGGAGGCCTTCGACG 60.756 66.667 6.77 0.00 33.46 5.12
1350 1382 3.637821 AGGAGGCATATAGGGTCTTCA 57.362 47.619 0.00 0.00 0.00 3.02
1425 1457 1.001378 GTTGATCCAAACAAGCGCACT 60.001 47.619 11.47 0.00 0.00 4.40
1519 1551 3.531538 TCATAATGAACCCTTCAGCGTC 58.468 45.455 0.00 0.00 43.98 5.19
1531 1563 4.917772 AAGCACGACCGTGATCATAATGAA 60.918 41.667 24.46 0.00 44.50 2.57
1534 1566 3.123804 GAAGCACGACCGTGATCATAAT 58.876 45.455 24.46 4.27 44.50 1.28
1590 1622 4.384056 CCGATAATCTCCATTGCTTGTCT 58.616 43.478 0.00 0.00 0.00 3.41
1660 1692 4.023021 GGGCTTCGGTTGTAACATGTAAAA 60.023 41.667 0.00 0.00 0.00 1.52
1729 1764 4.901849 ACTGGATCCATAAATCTTCTCGGA 59.098 41.667 16.63 0.00 0.00 4.55
2383 2439 4.946784 ATTGGAAGATTAGACGCACAAC 57.053 40.909 0.00 0.00 0.00 3.32
2395 2451 5.018809 ACACCTTTGCATGTATTGGAAGAT 58.981 37.500 9.01 0.00 36.96 2.40
2402 2458 8.588290 TTATTTCCTACACCTTTGCATGTATT 57.412 30.769 0.00 0.00 31.10 1.89
2425 2482 8.716674 AGGGAGTAATAAAGATCGGTACATTA 57.283 34.615 0.00 0.00 0.00 1.90
2450 2507 9.520204 CTAAAAAGACGTATATTTAGGAACGGA 57.480 33.333 14.20 0.00 39.57 4.69
2451 2508 9.520204 TCTAAAAAGACGTATATTTAGGAACGG 57.480 33.333 18.61 2.79 39.57 4.44
2466 2523 9.893305 AGTCCATTTAAAATGTCTAAAAAGACG 57.107 29.630 0.00 0.00 41.43 4.18
2582 2749 8.218488 AGTACTCCCTCCATTTCCAAATATAAC 58.782 37.037 0.00 0.00 0.00 1.89
2591 2758 8.431910 TGTAATATAGTACTCCCTCCATTTCC 57.568 38.462 11.32 0.00 0.00 3.13
2596 2763 6.657966 CACGATGTAATATAGTACTCCCTCCA 59.342 42.308 11.32 0.00 0.00 3.86
2708 2926 3.365164 CCGGCCGAGAACGAATTTTAAAA 60.365 43.478 30.73 2.51 42.66 1.52
2709 2927 2.160022 CCGGCCGAGAACGAATTTTAAA 59.840 45.455 30.73 0.00 42.66 1.52
2710 2928 1.733360 CCGGCCGAGAACGAATTTTAA 59.267 47.619 30.73 0.00 42.66 1.52
2711 2929 1.361793 CCGGCCGAGAACGAATTTTA 58.638 50.000 30.73 0.00 42.66 1.52
2741 2959 6.923508 TGCAGTGAATACGGAAGAATATACAG 59.076 38.462 0.00 0.00 0.00 2.74
2753 3196 4.201910 CCCACTTTTATGCAGTGAATACGG 60.202 45.833 4.70 0.00 43.90 4.02
2789 3232 1.643880 GCAATAAATGTGCACAGCCC 58.356 50.000 25.84 5.29 41.80 5.19
2791 3234 1.643880 GGGCAATAAATGTGCACAGC 58.356 50.000 25.84 20.35 45.11 4.40
2794 3237 2.462889 CGATGGGCAATAAATGTGCAC 58.537 47.619 10.75 10.75 46.01 4.57
2823 3266 5.244755 GGAGGGAGTAGATAGTAAGGTACG 58.755 50.000 0.00 0.00 0.00 3.67
2824 3267 5.221823 ACGGAGGGAGTAGATAGTAAGGTAC 60.222 48.000 0.00 0.00 0.00 3.34
2833 3276 5.393068 TTTAGGAACGGAGGGAGTAGATA 57.607 43.478 0.00 0.00 0.00 1.98
2873 3316 6.873605 TGTTGTCCATAGTGAAATGTGTAGAG 59.126 38.462 0.00 0.00 0.00 2.43
2875 3318 7.615582 ATGTTGTCCATAGTGAAATGTGTAG 57.384 36.000 0.00 0.00 29.82 2.74
2878 3321 7.334171 TCTGTATGTTGTCCATAGTGAAATGTG 59.666 37.037 0.00 0.00 36.71 3.21
2945 3388 3.057456 CCACTATAGACCACATACGGAGC 60.057 52.174 6.78 0.00 0.00 4.70
2954 3397 6.716934 TGAAGAGATTCCACTATAGACCAC 57.283 41.667 6.78 0.00 0.00 4.16
2960 3403 8.816894 ACAAGTCTTTGAAGAGATTCCACTATA 58.183 33.333 0.00 0.00 37.73 1.31
2971 3414 9.239002 CGTTCCTATATACAAGTCTTTGAAGAG 57.761 37.037 0.00 0.00 37.73 2.85
2975 3418 8.746530 ACTTCGTTCCTATATACAAGTCTTTGA 58.253 33.333 0.00 0.00 37.73 2.69
2985 3428 9.001542 ACATCTACTCACTTCGTTCCTATATAC 57.998 37.037 0.00 0.00 0.00 1.47
2989 3432 5.299782 GGACATCTACTCACTTCGTTCCTAT 59.700 44.000 0.00 0.00 0.00 2.57
2998 3441 3.762288 TGTTAGCGGACATCTACTCACTT 59.238 43.478 0.00 0.00 0.00 3.16
3001 3444 4.202121 GGAATGTTAGCGGACATCTACTCA 60.202 45.833 8.18 0.00 39.25 3.41
3006 3449 3.845781 ATGGAATGTTAGCGGACATCT 57.154 42.857 8.18 0.90 39.25 2.90
3020 3463 2.369394 GGAGAGCAAACGGAATGGAAT 58.631 47.619 0.00 0.00 0.00 3.01
3027 3470 1.005394 GAACGGGAGAGCAAACGGA 60.005 57.895 0.00 0.00 0.00 4.69
3047 3490 5.828299 TTCCCGTGATAAATTTGACCATC 57.172 39.130 0.00 0.00 0.00 3.51
3049 3492 4.827835 TGTTTCCCGTGATAAATTTGACCA 59.172 37.500 0.00 0.00 0.00 4.02
3062 3505 3.121738 AGAGTAGGTTTGTTTCCCGTG 57.878 47.619 0.00 0.00 0.00 4.94
3093 3536 3.963129 TCAAACCGAATGAGCCCTAAAT 58.037 40.909 0.00 0.00 0.00 1.40
3103 3546 6.876804 GTTTTGATTTCCTTCAAACCGAATG 58.123 36.000 0.00 0.00 43.38 2.67
3114 3557 7.886446 TCCTAATTCCTACGTTTTGATTTCCTT 59.114 33.333 0.00 0.00 0.00 3.36
3150 3593 5.357878 TGGCAAGTGACATCCTATCAAATTC 59.642 40.000 0.00 0.00 0.00 2.17
3165 3608 4.018506 TCAATTCCTTAGGATGGCAAGTGA 60.019 41.667 0.12 0.00 0.00 3.41
3168 3611 4.530875 AGTCAATTCCTTAGGATGGCAAG 58.469 43.478 8.89 0.00 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.