Multiple sequence alignment - TraesCS2D01G580800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G580800 chr2D 100.000 3159 0 0 1 3159 642830825 642827667 0.000000e+00 5834.0
1 TraesCS2D01G580800 chr2D 94.872 78 4 0 2413 2490 592288603 592288526 4.280000e-24 122.0
2 TraesCS2D01G580800 chr2D 98.507 67 1 0 1 67 313812015 313811949 5.540000e-23 119.0
3 TraesCS2D01G580800 chr2D 100.000 30 0 0 1411 1440 642829368 642829339 4.400000e-04 56.5
4 TraesCS2D01G580800 chr2D 100.000 30 0 0 1458 1487 642829415 642829386 4.400000e-04 56.5
5 TraesCS2D01G580800 chrUn 94.550 734 23 7 667 1387 31482986 31482257 0.000000e+00 1118.0
6 TraesCS2D01G580800 chrUn 88.444 675 74 4 1464 2136 31481575 31480903 0.000000e+00 811.0
7 TraesCS2D01G580800 chrUn 86.054 294 20 13 124 407 31484514 31484232 2.380000e-76 296.0
8 TraesCS2D01G580800 chrUn 94.175 103 1 1 551 648 31483390 31483288 5.460000e-33 152.0
9 TraesCS2D01G580800 chrUn 88.073 109 8 3 2279 2383 31480770 31480663 1.190000e-24 124.0
10 TraesCS2D01G580800 chrUn 96.104 77 2 1 395 470 31484217 31484141 1.190000e-24 124.0
11 TraesCS2D01G580800 chrUn 94.667 75 4 0 2416 2490 461112368 461112294 1.990000e-22 117.0
12 TraesCS2D01G580800 chrUn 100.000 49 0 0 502 550 31483806 31483758 1.210000e-14 91.6
13 TraesCS2D01G580800 chr2A 94.223 727 26 6 666 1387 767764689 767763974 0.000000e+00 1096.0
14 TraesCS2D01G580800 chr2A 85.064 944 102 28 1446 2365 767763316 767762388 0.000000e+00 926.0
15 TraesCS2D01G580800 chr2A 94.595 333 10 3 2827 3159 670306094 670305770 2.810000e-140 508.0
16 TraesCS2D01G580800 chr7B 96.360 577 13 1 2577 3153 494216741 494217309 0.000000e+00 942.0
17 TraesCS2D01G580800 chr7B 91.358 81 7 0 1 81 20575336 20575256 9.260000e-21 111.0
18 TraesCS2D01G580800 chr7D 95.704 582 17 1 2577 3158 470198866 470199439 0.000000e+00 929.0
19 TraesCS2D01G580800 chr7D 97.531 81 2 0 1 81 20246770 20246850 4.250000e-29 139.0
20 TraesCS2D01G580800 chr1A 93.846 585 26 3 2577 3159 508184791 508184215 0.000000e+00 872.0
21 TraesCS2D01G580800 chr1A 97.403 77 2 0 5 81 567480774 567480698 7.110000e-27 132.0
22 TraesCS2D01G580800 chr1A 93.590 78 5 0 2413 2490 52458238 52458315 1.990000e-22 117.0
23 TraesCS2D01G580800 chr1A 92.857 42 3 0 3112 3153 581638427 581638386 9.460000e-06 62.1
24 TraesCS2D01G580800 chr7A 91.595 583 29 4 2577 3153 528360766 528360198 0.000000e+00 787.0
25 TraesCS2D01G580800 chr7A 92.857 42 3 0 3112 3153 434778003 434778044 9.460000e-06 62.1
26 TraesCS2D01G580800 chr5B 95.307 277 13 0 2577 2853 57439758 57440034 1.040000e-119 440.0
27 TraesCS2D01G580800 chr5B 94.805 77 3 1 5 81 435596145 435596220 5.540000e-23 119.0
28 TraesCS2D01G580800 chr3A 98.701 77 1 0 5 81 730905661 730905585 1.530000e-28 137.0
29 TraesCS2D01G580800 chr3A 97.436 78 2 0 5 82 649040780 649040857 1.980000e-27 134.0
30 TraesCS2D01G580800 chr1B 97.403 77 2 0 5 81 36166344 36166420 7.110000e-27 132.0
31 TraesCS2D01G580800 chr1B 92.857 42 3 0 3112 3153 633761248 633761289 9.460000e-06 62.1
32 TraesCS2D01G580800 chr6D 95.062 81 4 0 1 81 230191028 230190948 9.200000e-26 128.0
33 TraesCS2D01G580800 chr3D 94.937 79 4 0 2412 2490 431631802 431631880 1.190000e-24 124.0
34 TraesCS2D01G580800 chr3D 94.667 75 4 0 2416 2490 165861888 165861962 1.990000e-22 117.0
35 TraesCS2D01G580800 chr6B 92.683 82 5 1 2410 2490 717901530 717901611 1.990000e-22 117.0
36 TraesCS2D01G580800 chr6B 90.476 42 4 0 3112 3153 281011516 281011557 4.400000e-04 56.5
37 TraesCS2D01G580800 chr6A 94.667 75 4 0 2416 2490 557970132 557970058 1.990000e-22 117.0
38 TraesCS2D01G580800 chr4A 94.667 75 4 0 2416 2490 83770907 83770833 1.990000e-22 117.0
39 TraesCS2D01G580800 chr4B 93.590 78 3 2 2416 2491 34029132 34029055 7.160000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G580800 chr2D 642827667 642830825 3158 True 1982.333333 5834 100.000000 1 3159 3 chr2D.!!$R3 3158
1 TraesCS2D01G580800 chrUn 31480663 31484514 3851 True 388.085714 1118 92.485714 124 2383 7 chrUn.!!$R2 2259
2 TraesCS2D01G580800 chr2A 767762388 767764689 2301 True 1011.000000 1096 89.643500 666 2365 2 chr2A.!!$R2 1699
3 TraesCS2D01G580800 chr7B 494216741 494217309 568 False 942.000000 942 96.360000 2577 3153 1 chr7B.!!$F1 576
4 TraesCS2D01G580800 chr7D 470198866 470199439 573 False 929.000000 929 95.704000 2577 3158 1 chr7D.!!$F2 581
5 TraesCS2D01G580800 chr1A 508184215 508184791 576 True 872.000000 872 93.846000 2577 3159 1 chr1A.!!$R1 582
6 TraesCS2D01G580800 chr7A 528360198 528360766 568 True 787.000000 787 91.595000 2577 3153 1 chr7A.!!$R1 576

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
118 119 0.039618 ATGGGCCATTCGTCAGGTTT 59.960 50.0 14.78 0.0 0.0 3.27 F
119 120 0.178975 TGGGCCATTCGTCAGGTTTT 60.179 50.0 0.00 0.0 0.0 2.43 F
2049 3668 0.034896 GGCTTCCTTCACCTCGTCAA 59.965 55.0 0.00 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2030 3649 0.034896 TTGACGAGGTGAAGGAAGCC 59.965 55.000 0.00 0.0 0.00 4.35 R
2093 3712 1.697982 ACCGAGCTTACCCTGAAAGTT 59.302 47.619 0.00 0.0 0.00 2.66 R
3094 4762 1.591594 AATGTGCGCGTATCCCGAG 60.592 57.895 8.43 0.0 39.56 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.791887 ATTATGTGCTTGATGTAATCTCGG 57.208 37.500 0.00 0.00 45.81 4.63
24 25 3.885724 TGTGCTTGATGTAATCTCGGA 57.114 42.857 0.00 0.00 45.81 4.55
25 26 4.406648 TGTGCTTGATGTAATCTCGGAT 57.593 40.909 0.00 0.00 45.81 4.18
26 27 4.122046 TGTGCTTGATGTAATCTCGGATG 58.878 43.478 0.00 0.00 45.81 3.51
27 28 4.141959 TGTGCTTGATGTAATCTCGGATGA 60.142 41.667 0.00 0.00 45.81 2.92
28 29 4.210120 GTGCTTGATGTAATCTCGGATGAC 59.790 45.833 0.00 0.00 45.81 3.06
29 30 4.141959 TGCTTGATGTAATCTCGGATGACA 60.142 41.667 6.55 6.55 45.81 3.58
30 31 4.993584 GCTTGATGTAATCTCGGATGACAT 59.006 41.667 13.65 13.65 45.81 3.06
31 32 5.468072 GCTTGATGTAATCTCGGATGACATT 59.532 40.000 14.50 3.66 45.81 2.71
32 33 6.347240 GCTTGATGTAATCTCGGATGACATTC 60.347 42.308 14.50 10.17 45.81 2.67
33 34 5.541845 TGATGTAATCTCGGATGACATTCC 58.458 41.667 14.50 7.00 45.81 3.01
34 35 4.623167 GATGTAATCTCGGATGACATTCCG 59.377 45.833 14.50 15.86 46.40 4.30
41 42 1.299541 GGATGACATTCCGAATGCGT 58.700 50.000 19.13 13.42 42.69 5.24
42 43 1.670811 GGATGACATTCCGAATGCGTT 59.329 47.619 19.13 5.67 42.69 4.84
43 44 2.097466 GGATGACATTCCGAATGCGTTT 59.903 45.455 19.13 1.70 42.69 3.60
44 45 2.610219 TGACATTCCGAATGCGTTTG 57.390 45.000 19.13 0.00 42.69 2.93
45 46 2.147150 TGACATTCCGAATGCGTTTGA 58.853 42.857 19.13 0.00 42.69 2.69
46 47 2.746904 TGACATTCCGAATGCGTTTGAT 59.253 40.909 19.13 0.00 42.69 2.57
47 48 3.190327 TGACATTCCGAATGCGTTTGATT 59.810 39.130 19.13 0.00 42.69 2.57
48 49 4.393371 TGACATTCCGAATGCGTTTGATTA 59.607 37.500 19.13 0.00 42.69 1.75
49 50 5.106515 TGACATTCCGAATGCGTTTGATTAA 60.107 36.000 19.13 0.00 42.69 1.40
50 51 5.704888 ACATTCCGAATGCGTTTGATTAAA 58.295 33.333 19.13 0.00 42.69 1.52
51 52 6.329496 ACATTCCGAATGCGTTTGATTAAAT 58.671 32.000 19.13 0.00 42.69 1.40
52 53 7.476667 ACATTCCGAATGCGTTTGATTAAATA 58.523 30.769 19.13 0.00 42.69 1.40
53 54 7.971168 ACATTCCGAATGCGTTTGATTAAATAA 59.029 29.630 19.13 0.00 42.69 1.40
54 55 8.802856 CATTCCGAATGCGTTTGATTAAATAAA 58.197 29.630 8.17 0.00 35.23 1.40
55 56 8.918961 TTCCGAATGCGTTTGATTAAATAAAT 57.081 26.923 7.52 0.00 35.23 1.40
56 57 8.334016 TCCGAATGCGTTTGATTAAATAAATG 57.666 30.769 7.52 3.79 35.23 2.32
57 58 7.043722 TCCGAATGCGTTTGATTAAATAAATGC 60.044 33.333 18.02 18.02 44.79 3.56
58 59 6.775874 CGAATGCGTTTGATTAAATAAATGCG 59.224 34.615 18.88 9.03 46.50 4.73
59 60 5.940603 TGCGTTTGATTAAATAAATGCGG 57.059 34.783 18.88 2.91 46.50 5.69
60 61 4.266502 TGCGTTTGATTAAATAAATGCGGC 59.733 37.500 18.88 0.00 46.50 6.53
61 62 4.266502 GCGTTTGATTAAATAAATGCGGCA 59.733 37.500 4.58 4.58 38.53 5.69
62 63 5.220303 GCGTTTGATTAAATAAATGCGGCAA 60.220 36.000 6.82 0.00 38.53 4.52
63 64 6.509358 GCGTTTGATTAAATAAATGCGGCAAT 60.509 34.615 6.82 0.00 38.53 3.56
64 65 7.306283 GCGTTTGATTAAATAAATGCGGCAATA 60.306 33.333 6.82 3.88 38.53 1.90
65 66 8.698854 CGTTTGATTAAATAAATGCGGCAATAT 58.301 29.630 6.82 6.30 0.00 1.28
69 70 9.202273 TGATTAAATAAATGCGGCAATATTTCC 57.798 29.630 26.60 20.23 32.09 3.13
70 71 7.954788 TTAAATAAATGCGGCAATATTTCCC 57.045 32.000 26.60 0.00 32.09 3.97
71 72 2.908688 AAATGCGGCAATATTTCCCC 57.091 45.000 6.82 0.00 0.00 4.81
72 73 2.086610 AATGCGGCAATATTTCCCCT 57.913 45.000 6.82 0.00 0.00 4.79
73 74 1.620822 ATGCGGCAATATTTCCCCTC 58.379 50.000 6.82 0.00 0.00 4.30
74 75 0.257328 TGCGGCAATATTTCCCCTCA 59.743 50.000 0.00 0.00 0.00 3.86
75 76 1.133513 TGCGGCAATATTTCCCCTCAT 60.134 47.619 0.00 0.00 0.00 2.90
76 77 2.107378 TGCGGCAATATTTCCCCTCATA 59.893 45.455 0.00 0.00 0.00 2.15
77 78 3.153919 GCGGCAATATTTCCCCTCATAA 58.846 45.455 0.00 0.00 0.00 1.90
78 79 3.572255 GCGGCAATATTTCCCCTCATAAA 59.428 43.478 0.00 0.00 0.00 1.40
79 80 4.038642 GCGGCAATATTTCCCCTCATAAAA 59.961 41.667 0.00 0.00 0.00 1.52
80 81 5.452636 GCGGCAATATTTCCCCTCATAAAAA 60.453 40.000 0.00 0.00 0.00 1.94
81 82 5.983118 CGGCAATATTTCCCCTCATAAAAAC 59.017 40.000 0.00 0.00 0.00 2.43
82 83 5.983118 GGCAATATTTCCCCTCATAAAAACG 59.017 40.000 0.00 0.00 0.00 3.60
83 84 5.462068 GCAATATTTCCCCTCATAAAAACGC 59.538 40.000 0.00 0.00 0.00 4.84
84 85 3.775661 ATTTCCCCTCATAAAAACGCG 57.224 42.857 3.53 3.53 0.00 6.01
85 86 2.188062 TTCCCCTCATAAAAACGCGT 57.812 45.000 5.58 5.58 0.00 6.01
86 87 1.729284 TCCCCTCATAAAAACGCGTC 58.271 50.000 14.44 0.00 0.00 5.19
87 88 0.372334 CCCCTCATAAAAACGCGTCG 59.628 55.000 14.44 0.00 0.00 5.12
88 89 0.247537 CCCTCATAAAAACGCGTCGC 60.248 55.000 14.44 7.29 0.00 5.19
114 115 3.113745 GCATGGGCCATTCGTCAG 58.886 61.111 18.46 5.51 0.00 3.51
115 116 2.484062 GCATGGGCCATTCGTCAGG 61.484 63.158 18.46 4.69 0.00 3.86
116 117 1.077501 CATGGGCCATTCGTCAGGT 60.078 57.895 18.46 0.00 0.00 4.00
117 118 0.680921 CATGGGCCATTCGTCAGGTT 60.681 55.000 18.46 0.00 0.00 3.50
118 119 0.039618 ATGGGCCATTCGTCAGGTTT 59.960 50.000 14.78 0.00 0.00 3.27
119 120 0.178975 TGGGCCATTCGTCAGGTTTT 60.179 50.000 0.00 0.00 0.00 2.43
120 121 0.966179 GGGCCATTCGTCAGGTTTTT 59.034 50.000 4.39 0.00 0.00 1.94
178 182 1.490693 CGAATCGAGGATGGCCGTTG 61.491 60.000 0.00 0.00 39.96 4.10
234 238 2.746803 GCGTTAATTGCTCGGCGGT 61.747 57.895 7.21 0.00 0.00 5.68
243 247 0.825410 TGCTCGGCGGTATTAGGAAA 59.175 50.000 7.21 0.00 0.00 3.13
244 248 1.215244 GCTCGGCGGTATTAGGAAAC 58.785 55.000 7.21 0.00 0.00 2.78
245 249 1.484356 CTCGGCGGTATTAGGAAACG 58.516 55.000 7.21 0.00 0.00 3.60
247 251 1.202290 TCGGCGGTATTAGGAAACGAC 60.202 52.381 7.21 0.00 0.00 4.34
248 252 1.469595 CGGCGGTATTAGGAAACGACA 60.470 52.381 0.00 0.00 31.79 4.35
249 253 1.929169 GGCGGTATTAGGAAACGACAC 59.071 52.381 0.00 0.00 31.79 3.67
250 254 1.585214 GCGGTATTAGGAAACGACACG 59.415 52.381 0.00 0.00 0.00 4.49
252 256 1.929169 GGTATTAGGAAACGACACGGC 59.071 52.381 0.00 0.00 0.00 5.68
253 257 2.417787 GGTATTAGGAAACGACACGGCT 60.418 50.000 0.00 0.00 0.00 5.52
254 258 1.722011 ATTAGGAAACGACACGGCTG 58.278 50.000 0.00 0.00 0.00 4.85
255 259 0.947180 TTAGGAAACGACACGGCTGC 60.947 55.000 0.00 0.00 0.00 5.25
256 260 2.775032 TAGGAAACGACACGGCTGCC 62.775 60.000 9.11 9.11 0.00 4.85
257 261 3.723348 GAAACGACACGGCTGCCC 61.723 66.667 14.12 0.00 0.00 5.36
276 280 1.153429 GCCCGCCCGCCTATATAAG 60.153 63.158 0.00 0.00 0.00 1.73
284 288 2.028385 CCCGCCTATATAAGTGACCACC 60.028 54.545 0.00 0.00 0.00 4.61
285 289 2.897969 CCGCCTATATAAGTGACCACCT 59.102 50.000 0.00 0.00 0.00 4.00
286 290 3.056749 CCGCCTATATAAGTGACCACCTC 60.057 52.174 0.00 0.00 0.00 3.85
287 291 3.572682 CGCCTATATAAGTGACCACCTCA 59.427 47.826 0.00 0.00 0.00 3.86
288 292 4.038763 CGCCTATATAAGTGACCACCTCAA 59.961 45.833 0.00 0.00 0.00 3.02
289 293 5.298347 GCCTATATAAGTGACCACCTCAAC 58.702 45.833 0.00 0.00 0.00 3.18
290 294 5.742255 GCCTATATAAGTGACCACCTCAACC 60.742 48.000 0.00 0.00 0.00 3.77
291 295 4.772886 ATATAAGTGACCACCTCAACCC 57.227 45.455 0.00 0.00 0.00 4.11
292 296 1.809133 TAAGTGACCACCTCAACCCA 58.191 50.000 0.00 0.00 0.00 4.51
293 297 1.149101 AAGTGACCACCTCAACCCAT 58.851 50.000 0.00 0.00 0.00 4.00
294 298 0.693049 AGTGACCACCTCAACCCATC 59.307 55.000 0.00 0.00 0.00 3.51
316 326 3.827008 TCACATCTAGCACTCCATTCC 57.173 47.619 0.00 0.00 0.00 3.01
318 328 1.414181 ACATCTAGCACTCCATTCCCG 59.586 52.381 0.00 0.00 0.00 5.14
332 342 3.400054 CCCGTCCCCTCTCAACCC 61.400 72.222 0.00 0.00 0.00 4.11
345 355 4.081586 CCTCTCAACCCAAAGAGTAGTACC 60.082 50.000 0.00 0.00 37.84 3.34
347 357 4.282703 TCTCAACCCAAAGAGTAGTACCAC 59.717 45.833 0.00 0.00 33.63 4.16
350 360 5.479375 TCAACCCAAAGAGTAGTACCACTAG 59.521 44.000 0.00 0.00 30.12 2.57
381 397 1.459592 GAACATCACACTCCGTTTCCG 59.540 52.381 0.00 0.00 0.00 4.30
419 461 3.541831 CATCGGTTCGGTGCGTCG 61.542 66.667 0.00 0.00 29.25 5.12
475 544 2.181521 GGTTCGGTTCGGTGCACAA 61.182 57.895 20.43 1.73 0.00 3.33
549 1262 3.305131 CGAGTGCAGCGGGAGTATAAATA 60.305 47.826 1.14 0.00 0.00 1.40
574 1287 1.883275 CTTGTTTATTGGTCGGCCACA 59.117 47.619 9.15 0.00 46.01 4.17
698 1699 6.827727 TCCCTTACTTTGCCTATCATTACTC 58.172 40.000 0.00 0.00 0.00 2.59
777 1783 4.822350 GGACATCCCTAAGTTTCCTTATGC 59.178 45.833 0.00 0.00 32.82 3.14
878 1884 7.042051 CCGAGAATTACAAGAACTTGAAACTGA 60.042 37.037 19.35 0.00 42.93 3.41
882 1888 9.788960 GAATTACAAGAACTTGAAACTGAAACT 57.211 29.630 19.35 0.00 42.93 2.66
883 1889 9.573133 AATTACAAGAACTTGAAACTGAAACTG 57.427 29.630 19.35 0.00 42.93 3.16
884 1890 5.954335 ACAAGAACTTGAAACTGAAACTGG 58.046 37.500 19.35 0.00 42.93 4.00
885 1891 5.710099 ACAAGAACTTGAAACTGAAACTGGA 59.290 36.000 19.35 0.00 42.93 3.86
886 1892 6.127897 ACAAGAACTTGAAACTGAAACTGGAG 60.128 38.462 19.35 0.00 42.93 3.86
1245 2254 6.879993 TCTTTATATTGACCTGCCGTTGTTTA 59.120 34.615 0.00 0.00 0.00 2.01
1330 2339 3.072330 TGGATTTGCTTGACTCTACCACA 59.928 43.478 0.00 0.00 0.00 4.17
1331 2340 4.263462 TGGATTTGCTTGACTCTACCACAT 60.263 41.667 0.00 0.00 0.00 3.21
1334 2343 3.769739 TGCTTGACTCTACCACATTGT 57.230 42.857 0.00 0.00 0.00 2.71
1350 2359 6.702972 CACATTGTTGTGTTTGTTTTCTCA 57.297 33.333 0.00 0.00 46.68 3.27
1354 2363 6.702972 TTGTTGTGTTTGTTTTCTCATGTG 57.297 33.333 0.00 0.00 0.00 3.21
1358 2367 5.788450 TGTGTTTGTTTTCTCATGTGGTTT 58.212 33.333 0.00 0.00 0.00 3.27
1359 2368 5.866633 TGTGTTTGTTTTCTCATGTGGTTTC 59.133 36.000 0.00 0.00 0.00 2.78
1360 2369 5.866633 GTGTTTGTTTTCTCATGTGGTTTCA 59.133 36.000 0.00 0.00 0.00 2.69
1361 2370 6.367422 GTGTTTGTTTTCTCATGTGGTTTCAA 59.633 34.615 0.00 0.00 0.00 2.69
1362 2371 6.367422 TGTTTGTTTTCTCATGTGGTTTCAAC 59.633 34.615 0.00 0.00 0.00 3.18
1418 2841 5.692115 AAAGTGGTTTTCTGGAATGGTTT 57.308 34.783 0.00 0.00 0.00 3.27
1441 2864 6.993786 TTTTACTGACACACATTCTCAACA 57.006 33.333 0.00 0.00 0.00 3.33
1443 2866 6.785488 TTACTGACACACATTCTCAACATC 57.215 37.500 0.00 0.00 0.00 3.06
1444 2867 4.067896 ACTGACACACATTCTCAACATCC 58.932 43.478 0.00 0.00 0.00 3.51
1451 3066 4.202503 ACACATTCTCAACATCCCTCAGTT 60.203 41.667 0.00 0.00 0.00 3.16
1461 3076 8.737168 TCAACATCCCTCAGTTATTTAGAATG 57.263 34.615 0.00 0.00 0.00 2.67
1499 3118 9.739276 ACACACATTCTCAATCTTTTATTAGGA 57.261 29.630 0.00 0.00 0.00 2.94
1539 3158 2.485814 GAGAAGTGTTGGAGGACATTGC 59.514 50.000 0.00 0.00 0.00 3.56
1551 3170 2.437281 AGGACATTGCGATCTTCCTCAT 59.563 45.455 7.58 0.00 30.40 2.90
1561 3180 4.402155 GCGATCTTCCTCATGGATCTCTAT 59.598 45.833 7.14 0.00 42.81 1.98
1570 3189 5.911378 TCATGGATCTCTATGAGAATCCG 57.089 43.478 2.46 0.36 42.27 4.18
1572 3191 5.417266 TCATGGATCTCTATGAGAATCCGTC 59.583 44.000 2.46 3.62 42.27 4.79
1575 3194 1.880675 TCTCTATGAGAATCCGTCGCC 59.119 52.381 0.00 0.00 35.59 5.54
1603 3222 4.513318 GCAAATGATCTAGGCTCCTTGTAC 59.487 45.833 0.00 0.00 0.00 2.90
1615 3234 3.495001 GCTCCTTGTACTTTCACACACTC 59.505 47.826 0.00 0.00 0.00 3.51
1662 3281 0.764890 TTCGCCCCCTTGGATGATAG 59.235 55.000 0.00 0.00 35.39 2.08
1692 3311 2.200067 CAGCATCGCAAAACACCAAAA 58.800 42.857 0.00 0.00 0.00 2.44
1700 3319 6.517914 TCGCAAAACACCAAAAATATGTTC 57.482 33.333 0.00 0.00 35.54 3.18
1717 3336 0.833287 TTCATCCTCTAGGCACAGGC 59.167 55.000 0.00 0.00 40.13 4.85
1735 3354 6.389091 CACAGGCTGTCTCTATGATCTTATC 58.611 44.000 19.13 0.00 0.00 1.75
1739 3358 7.930325 CAGGCTGTCTCTATGATCTTATCAAAA 59.070 37.037 6.28 0.00 43.50 2.44
1751 3370 6.600822 TGATCTTATCAAAAGCTGGAAGAAGG 59.399 38.462 0.00 0.00 36.11 3.46
1759 3378 2.932261 AGCTGGAAGAAGGTTTCGTTT 58.068 42.857 0.00 0.00 34.07 3.60
1768 3387 6.555812 AAGAAGGTTTCGTTTACCATCTTC 57.444 37.500 13.82 0.00 45.57 2.87
1771 3390 5.941948 AGGTTTCGTTTACCATCTTCTTG 57.058 39.130 0.00 0.00 38.16 3.02
1774 3393 5.410439 GGTTTCGTTTACCATCTTCTTGCTA 59.590 40.000 0.00 0.00 35.67 3.49
1798 3417 0.401356 TGCTGCTTGTGGAGGAATCA 59.599 50.000 0.00 0.00 31.89 2.57
1835 3454 0.396060 GCAAACAAGGCCCCATTTCA 59.604 50.000 0.00 0.00 0.00 2.69
1841 3460 1.479323 CAAGGCCCCATTTCAGTGATG 59.521 52.381 0.00 0.00 0.00 3.07
1842 3461 0.706433 AGGCCCCATTTCAGTGATGT 59.294 50.000 0.00 0.00 0.00 3.06
1844 3463 1.901833 GGCCCCATTTCAGTGATGTTT 59.098 47.619 0.00 0.00 0.00 2.83
1845 3464 2.094026 GGCCCCATTTCAGTGATGTTTC 60.094 50.000 0.00 0.00 0.00 2.78
1873 3492 0.321996 GTCCTCAGTTTCGGGCTCTT 59.678 55.000 0.00 0.00 0.00 2.85
1889 3508 2.422832 GCTCTTTTTGATGAGGCAGAGG 59.577 50.000 0.00 0.00 0.00 3.69
1890 3509 2.422832 CTCTTTTTGATGAGGCAGAGGC 59.577 50.000 0.00 0.00 40.13 4.70
1898 3517 4.079850 AGGCAGAGGCGCACAGAG 62.080 66.667 10.83 0.00 42.47 3.35
1902 3521 1.815196 CAGAGGCGCACAGAGAGAT 59.185 57.895 10.83 0.00 0.00 2.75
1931 3550 3.119352 GGAAAGGCTGGCTTCTTTGTATG 60.119 47.826 17.30 0.00 33.85 2.39
1937 3556 4.444876 GGCTGGCTTCTTTGTATGAGGATA 60.445 45.833 0.00 0.00 0.00 2.59
1953 3572 2.832129 AGGATACAAAGGAGCTTGACGA 59.168 45.455 0.00 0.00 41.41 4.20
1995 3614 0.320771 GTCATTGAGGCTGACGGTGT 60.321 55.000 0.00 0.00 34.24 4.16
2030 3649 0.167470 CTTGCAGCGAATGGTCACTG 59.833 55.000 0.00 0.00 37.06 3.66
2049 3668 0.034896 GGCTTCCTTCACCTCGTCAA 59.965 55.000 0.00 0.00 0.00 3.18
2056 3675 2.352814 CCTTCACCTCGTCAAGTTCGAT 60.353 50.000 0.00 0.00 36.73 3.59
2090 3709 0.755686 AGCTATACTGGTGAGGCAGC 59.244 55.000 0.00 0.00 0.00 5.25
2093 3712 2.300152 GCTATACTGGTGAGGCAGCATA 59.700 50.000 0.00 0.00 41.09 3.14
2105 3724 2.576191 AGGCAGCATAACTTTCAGGGTA 59.424 45.455 0.00 0.00 0.00 3.69
2106 3725 3.010138 AGGCAGCATAACTTTCAGGGTAA 59.990 43.478 0.00 0.00 0.00 2.85
2111 3730 3.309954 GCATAACTTTCAGGGTAAGCTCG 59.690 47.826 0.00 0.00 0.00 5.03
2119 3738 2.304761 TCAGGGTAAGCTCGGTTTGAAT 59.695 45.455 0.00 0.00 0.00 2.57
2120 3739 2.678336 CAGGGTAAGCTCGGTTTGAATC 59.322 50.000 0.00 0.00 0.00 2.52
2123 3742 3.374367 GGGTAAGCTCGGTTTGAATCTTC 59.626 47.826 0.00 0.00 0.00 2.87
2131 3750 1.546029 GGTTTGAATCTTCAGGTGCCC 59.454 52.381 0.00 0.00 38.61 5.36
2135 3754 1.207089 TGAATCTTCAGGTGCCCGTAG 59.793 52.381 0.00 0.00 32.50 3.51
2136 3755 0.107654 AATCTTCAGGTGCCCGTAGC 60.108 55.000 0.00 0.00 44.14 3.58
2168 3787 2.973945 CCAGAAGGTAGTTGCTGTACC 58.026 52.381 0.00 2.48 40.42 3.34
2174 3793 2.889852 GGTAGTTGCTGTACCTGTAGC 58.110 52.381 0.00 0.00 37.54 3.58
2179 3798 2.178912 TGCTGTACCTGTAGCAAACC 57.821 50.000 3.29 0.00 46.06 3.27
2194 3813 5.556006 AGCAAACCTTGTACCTGTAGTAA 57.444 39.130 0.00 0.00 31.05 2.24
2205 3824 6.884832 TGTACCTGTAGTAAATTCATCCAGG 58.115 40.000 0.00 0.00 42.84 4.45
2206 3825 6.670464 TGTACCTGTAGTAAATTCATCCAGGA 59.330 38.462 9.59 0.00 40.29 3.86
2226 3855 5.082425 AGGAGAATGCTGTTTTGGAGAATT 58.918 37.500 0.00 0.00 32.93 2.17
2227 3856 5.047519 AGGAGAATGCTGTTTTGGAGAATTG 60.048 40.000 0.00 0.00 32.93 2.32
2230 3877 4.942761 ATGCTGTTTTGGAGAATTGTGT 57.057 36.364 0.00 0.00 0.00 3.72
2234 3881 5.163426 TGCTGTTTTGGAGAATTGTGTCAAT 60.163 36.000 0.00 0.00 0.00 2.57
2236 3883 6.074142 GCTGTTTTGGAGAATTGTGTCAATTC 60.074 38.462 20.62 20.62 37.01 2.17
2237 3891 7.111247 TGTTTTGGAGAATTGTGTCAATTCT 57.889 32.000 26.94 26.94 46.38 2.40
2247 3901 4.488126 TGTGTCAATTCTTTGCTGTAGC 57.512 40.909 0.00 0.00 42.50 3.58
2252 3906 3.753272 TCAATTCTTTGCTGTAGCTCCAC 59.247 43.478 5.38 0.00 42.66 4.02
2263 3917 0.639943 TAGCTCCACCCTGGGATGTA 59.360 55.000 22.23 0.00 38.32 2.29
2266 3920 0.326618 CTCCACCCTGGGATGTACCT 60.327 60.000 22.23 0.00 38.32 3.08
2267 3921 0.620410 TCCACCCTGGGATGTACCTG 60.620 60.000 22.23 4.88 38.32 4.00
2269 3923 1.624113 CCACCCTGGGATGTACCTGTA 60.624 57.143 22.23 0.00 38.98 2.74
2270 3924 1.762957 CACCCTGGGATGTACCTGTAG 59.237 57.143 22.23 0.00 38.98 2.74
2359 4021 4.072131 TGCTCCCACTAGTTTGACAAATC 58.928 43.478 3.49 0.00 0.00 2.17
2365 4027 5.409826 CCCACTAGTTTGACAAATCTCTGAC 59.590 44.000 3.49 0.00 0.00 3.51
2367 4029 6.652481 CCACTAGTTTGACAAATCTCTGACAT 59.348 38.462 3.49 0.00 0.00 3.06
2368 4030 7.173907 CCACTAGTTTGACAAATCTCTGACATT 59.826 37.037 3.49 0.00 0.00 2.71
2369 4031 8.013947 CACTAGTTTGACAAATCTCTGACATTG 58.986 37.037 3.49 0.00 0.00 2.82
2375 4037 5.306532 ACAAATCTCTGACATTGTCATGC 57.693 39.130 19.29 0.00 41.94 4.06
2376 4038 4.763279 ACAAATCTCTGACATTGTCATGCA 59.237 37.500 19.29 7.00 41.94 3.96
2377 4039 5.106277 ACAAATCTCTGACATTGTCATGCAG 60.106 40.000 19.29 14.76 41.94 4.41
2399 4061 6.602179 CAGACGAAAAACTGCATATTCTTCA 58.398 36.000 0.00 0.00 0.00 3.02
2400 4062 7.077605 CAGACGAAAAACTGCATATTCTTCAA 58.922 34.615 0.00 0.00 0.00 2.69
2401 4063 7.269937 CAGACGAAAAACTGCATATTCTTCAAG 59.730 37.037 0.00 0.00 0.00 3.02
2402 4064 5.858581 ACGAAAAACTGCATATTCTTCAAGC 59.141 36.000 0.00 0.00 0.00 4.01
2403 4065 6.088824 CGAAAAACTGCATATTCTTCAAGCT 58.911 36.000 0.00 0.00 0.00 3.74
2404 4066 6.033196 CGAAAAACTGCATATTCTTCAAGCTG 59.967 38.462 0.00 0.00 0.00 4.24
2405 4067 4.978083 AACTGCATATTCTTCAAGCTGG 57.022 40.909 0.00 0.00 0.00 4.85
2406 4068 4.226427 ACTGCATATTCTTCAAGCTGGA 57.774 40.909 0.00 0.00 0.00 3.86
2407 4069 3.944015 ACTGCATATTCTTCAAGCTGGAC 59.056 43.478 0.00 0.00 0.00 4.02
2408 4070 3.943381 CTGCATATTCTTCAAGCTGGACA 59.057 43.478 0.00 0.00 0.00 4.02
2409 4071 3.943381 TGCATATTCTTCAAGCTGGACAG 59.057 43.478 0.00 0.00 0.00 3.51
2410 4072 4.194640 GCATATTCTTCAAGCTGGACAGA 58.805 43.478 3.00 0.00 0.00 3.41
2411 4073 4.820716 GCATATTCTTCAAGCTGGACAGAT 59.179 41.667 3.00 0.00 0.00 2.90
2412 4074 5.298777 GCATATTCTTCAAGCTGGACAGATT 59.701 40.000 3.00 0.00 37.57 2.40
2413 4075 6.484643 GCATATTCTTCAAGCTGGACAGATTA 59.515 38.462 2.17 0.00 34.42 1.75
2414 4076 7.174599 GCATATTCTTCAAGCTGGACAGATTAT 59.825 37.037 2.17 1.97 34.42 1.28
2415 4077 9.064706 CATATTCTTCAAGCTGGACAGATTATT 57.935 33.333 2.17 0.00 34.42 1.40
2417 4079 7.849804 TTCTTCAAGCTGGACAGATTATTAC 57.150 36.000 2.17 0.00 34.42 1.89
2418 4080 7.187824 TCTTCAAGCTGGACAGATTATTACT 57.812 36.000 2.17 0.00 34.42 2.24
2419 4081 7.268586 TCTTCAAGCTGGACAGATTATTACTC 58.731 38.462 2.17 0.00 34.42 2.59
2420 4082 5.918608 TCAAGCTGGACAGATTATTACTCC 58.081 41.667 2.17 0.00 34.42 3.85
2421 4083 4.965200 AGCTGGACAGATTATTACTCCC 57.035 45.455 3.00 0.00 0.00 4.30
2422 4084 4.561752 AGCTGGACAGATTATTACTCCCT 58.438 43.478 3.00 0.00 0.00 4.20
2423 4085 4.591072 AGCTGGACAGATTATTACTCCCTC 59.409 45.833 3.00 0.00 0.00 4.30
2424 4086 4.262678 GCTGGACAGATTATTACTCCCTCC 60.263 50.000 3.00 0.00 0.00 4.30
2425 4087 3.895656 TGGACAGATTATTACTCCCTCCG 59.104 47.826 0.00 0.00 0.00 4.63
2426 4088 3.896272 GGACAGATTATTACTCCCTCCGT 59.104 47.826 0.00 0.00 0.00 4.69
2427 4089 4.022155 GGACAGATTATTACTCCCTCCGTC 60.022 50.000 0.00 0.00 0.00 4.79
2428 4090 4.805744 ACAGATTATTACTCCCTCCGTCT 58.194 43.478 0.00 0.00 0.00 4.18
2429 4091 4.828387 ACAGATTATTACTCCCTCCGTCTC 59.172 45.833 0.00 0.00 0.00 3.36
2430 4092 4.827835 CAGATTATTACTCCCTCCGTCTCA 59.172 45.833 0.00 0.00 0.00 3.27
2431 4093 5.478679 CAGATTATTACTCCCTCCGTCTCAT 59.521 44.000 0.00 0.00 0.00 2.90
2432 4094 6.659668 CAGATTATTACTCCCTCCGTCTCATA 59.340 42.308 0.00 0.00 0.00 2.15
2433 4095 7.176865 CAGATTATTACTCCCTCCGTCTCATAA 59.823 40.741 0.00 0.00 0.00 1.90
2434 4096 7.896496 AGATTATTACTCCCTCCGTCTCATAAT 59.104 37.037 0.00 0.00 0.00 1.28
2435 4097 9.186837 GATTATTACTCCCTCCGTCTCATAATA 57.813 37.037 0.00 0.00 0.00 0.98
2436 4098 9.716556 ATTATTACTCCCTCCGTCTCATAATAT 57.283 33.333 0.00 0.00 0.00 1.28
2439 4101 8.577048 TTACTCCCTCCGTCTCATAATATAAG 57.423 38.462 0.00 0.00 0.00 1.73
2440 4102 6.791371 ACTCCCTCCGTCTCATAATATAAGA 58.209 40.000 0.00 0.00 0.00 2.10
2441 4103 6.887545 ACTCCCTCCGTCTCATAATATAAGAG 59.112 42.308 0.00 0.00 0.00 2.85
2442 4104 5.652891 TCCCTCCGTCTCATAATATAAGAGC 59.347 44.000 0.00 0.00 0.00 4.09
2443 4105 5.449314 CCCTCCGTCTCATAATATAAGAGCG 60.449 48.000 0.00 0.00 0.00 5.03
2444 4106 5.124138 CCTCCGTCTCATAATATAAGAGCGT 59.876 44.000 0.00 0.00 31.69 5.07
2445 4107 6.349445 CCTCCGTCTCATAATATAAGAGCGTT 60.349 42.308 0.00 0.00 31.69 4.84
2446 4108 6.978338 TCCGTCTCATAATATAAGAGCGTTT 58.022 36.000 0.00 0.00 31.69 3.60
2447 4109 7.431249 TCCGTCTCATAATATAAGAGCGTTTT 58.569 34.615 0.00 0.00 31.69 2.43
2448 4110 7.924412 TCCGTCTCATAATATAAGAGCGTTTTT 59.076 33.333 0.00 0.00 31.69 1.94
2449 4111 8.004344 CCGTCTCATAATATAAGAGCGTTTTTG 58.996 37.037 0.00 0.00 31.69 2.44
2450 4112 8.752254 CGTCTCATAATATAAGAGCGTTTTTGA 58.248 33.333 0.00 0.00 0.00 2.69
2451 4113 9.851043 GTCTCATAATATAAGAGCGTTTTTGAC 57.149 33.333 0.00 0.00 0.00 3.18
2452 4114 9.594478 TCTCATAATATAAGAGCGTTTTTGACA 57.406 29.630 0.00 0.00 0.00 3.58
2453 4115 9.638300 CTCATAATATAAGAGCGTTTTTGACAC 57.362 33.333 0.00 0.00 0.00 3.67
2454 4116 9.378551 TCATAATATAAGAGCGTTTTTGACACT 57.621 29.630 0.00 0.00 0.00 3.55
2460 4122 8.773404 ATAAGAGCGTTTTTGACACTATACTT 57.227 30.769 0.00 0.00 0.00 2.24
2461 4123 6.467723 AGAGCGTTTTTGACACTATACTTG 57.532 37.500 0.00 0.00 0.00 3.16
2462 4124 5.989777 AGAGCGTTTTTGACACTATACTTGT 59.010 36.000 0.00 0.00 0.00 3.16
2463 4125 5.985781 AGCGTTTTTGACACTATACTTGTG 58.014 37.500 0.00 0.00 40.87 3.33
2472 4134 5.591643 ACACTATACTTGTGTCAAAAGCG 57.408 39.130 2.40 0.00 44.24 4.68
2473 4135 4.084013 ACACTATACTTGTGTCAAAAGCGC 60.084 41.667 0.00 0.00 44.24 5.92
2474 4136 4.152402 CACTATACTTGTGTCAAAAGCGCT 59.848 41.667 2.64 2.64 0.00 5.92
2475 4137 3.813529 ATACTTGTGTCAAAAGCGCTC 57.186 42.857 12.06 0.00 0.00 5.03
2476 4138 1.668419 ACTTGTGTCAAAAGCGCTCT 58.332 45.000 12.06 0.00 0.00 4.09
2477 4139 2.017049 ACTTGTGTCAAAAGCGCTCTT 58.983 42.857 12.06 0.00 0.00 2.85
2478 4140 3.202906 ACTTGTGTCAAAAGCGCTCTTA 58.797 40.909 12.06 0.00 31.02 2.10
2479 4141 3.815401 ACTTGTGTCAAAAGCGCTCTTAT 59.185 39.130 12.06 0.00 31.02 1.73
2480 4142 4.994852 ACTTGTGTCAAAAGCGCTCTTATA 59.005 37.500 12.06 0.00 31.02 0.98
2481 4143 5.643777 ACTTGTGTCAAAAGCGCTCTTATAT 59.356 36.000 12.06 0.00 31.02 0.86
2482 4144 6.149474 ACTTGTGTCAAAAGCGCTCTTATATT 59.851 34.615 12.06 0.00 31.02 1.28
2483 4145 7.333423 ACTTGTGTCAAAAGCGCTCTTATATTA 59.667 33.333 12.06 0.00 31.02 0.98
2484 4146 7.786178 TGTGTCAAAAGCGCTCTTATATTAT 57.214 32.000 12.06 0.00 31.02 1.28
2485 4147 7.630026 TGTGTCAAAAGCGCTCTTATATTATG 58.370 34.615 12.06 2.09 31.02 1.90
2486 4148 7.072030 GTGTCAAAAGCGCTCTTATATTATGG 58.928 38.462 12.06 0.00 31.02 2.74
2487 4149 6.204688 TGTCAAAAGCGCTCTTATATTATGGG 59.795 38.462 12.06 0.00 31.02 4.00
2488 4150 6.426937 GTCAAAAGCGCTCTTATATTATGGGA 59.573 38.462 12.06 0.00 31.02 4.37
2489 4151 6.426937 TCAAAAGCGCTCTTATATTATGGGAC 59.573 38.462 12.06 0.00 31.02 4.46
2490 4152 5.865085 AAAGCGCTCTTATATTATGGGACA 58.135 37.500 12.06 0.00 35.33 4.02
2491 4153 5.701290 AAAGCGCTCTTATATTATGGGACAC 59.299 40.000 12.06 0.00 34.02 3.67
2492 4154 7.241208 AAAGCGCTCTTATATTATGGGACACC 61.241 42.308 12.06 0.00 34.02 4.16
2502 4164 3.635271 TGGGACACCGTGTTATTGG 57.365 52.632 5.45 0.00 40.75 3.16
2503 4165 0.766131 TGGGACACCGTGTTATTGGT 59.234 50.000 5.45 0.00 40.75 3.67
2504 4166 1.143277 TGGGACACCGTGTTATTGGTT 59.857 47.619 5.45 0.00 40.75 3.67
2505 4167 2.232399 GGGACACCGTGTTATTGGTTT 58.768 47.619 5.45 0.00 35.96 3.27
2506 4168 3.181447 TGGGACACCGTGTTATTGGTTTA 60.181 43.478 5.45 0.00 40.75 2.01
2507 4169 3.437741 GGGACACCGTGTTATTGGTTTAG 59.562 47.826 5.45 0.00 35.96 1.85
2508 4170 3.437741 GGACACCGTGTTATTGGTTTAGG 59.562 47.826 5.45 0.00 35.96 2.69
2509 4171 4.067192 GACACCGTGTTATTGGTTTAGGT 58.933 43.478 5.45 0.00 35.96 3.08
2510 4172 4.413495 CACCGTGTTATTGGTTTAGGTG 57.587 45.455 0.00 0.00 41.29 4.00
2511 4173 2.815503 ACCGTGTTATTGGTTTAGGTGC 59.184 45.455 0.00 0.00 33.81 5.01
2512 4174 3.078837 CCGTGTTATTGGTTTAGGTGCT 58.921 45.455 0.00 0.00 0.00 4.40
2513 4175 3.119990 CCGTGTTATTGGTTTAGGTGCTG 60.120 47.826 0.00 0.00 0.00 4.41
2514 4176 3.119990 CGTGTTATTGGTTTAGGTGCTGG 60.120 47.826 0.00 0.00 0.00 4.85
2515 4177 3.192633 GTGTTATTGGTTTAGGTGCTGGG 59.807 47.826 0.00 0.00 0.00 4.45
2516 4178 2.137810 TATTGGTTTAGGTGCTGGGC 57.862 50.000 0.00 0.00 0.00 5.36
2517 4179 0.965363 ATTGGTTTAGGTGCTGGGCG 60.965 55.000 0.00 0.00 0.00 6.13
2518 4180 3.440415 GGTTTAGGTGCTGGGCGC 61.440 66.667 0.00 0.00 38.45 6.53
2519 4181 2.359975 GTTTAGGTGCTGGGCGCT 60.360 61.111 7.64 0.00 39.23 5.92
2520 4182 2.046314 TTTAGGTGCTGGGCGCTC 60.046 61.111 7.64 2.47 39.23 5.03
2521 4183 3.950794 TTTAGGTGCTGGGCGCTCG 62.951 63.158 7.64 0.02 39.23 5.03
2528 4190 4.457496 CTGGGCGCTCGTGGTCAT 62.457 66.667 7.64 0.00 0.00 3.06
2529 4191 4.758251 TGGGCGCTCGTGGTCATG 62.758 66.667 7.64 0.00 0.00 3.07
2532 4194 4.451150 GCGCTCGTGGTCATGGGA 62.451 66.667 0.00 0.00 0.00 4.37
2533 4195 2.264480 CGCTCGTGGTCATGGGAA 59.736 61.111 0.00 0.00 0.00 3.97
2534 4196 1.811266 CGCTCGTGGTCATGGGAAG 60.811 63.158 0.00 0.00 0.00 3.46
2535 4197 1.450312 GCTCGTGGTCATGGGAAGG 60.450 63.158 0.00 0.00 0.00 3.46
2536 4198 1.899437 GCTCGTGGTCATGGGAAGGA 61.899 60.000 0.00 0.00 0.00 3.36
2537 4199 0.833287 CTCGTGGTCATGGGAAGGAT 59.167 55.000 0.00 0.00 0.00 3.24
2538 4200 0.830648 TCGTGGTCATGGGAAGGATC 59.169 55.000 0.00 0.00 0.00 3.36
2539 4201 0.833287 CGTGGTCATGGGAAGGATCT 59.167 55.000 0.00 0.00 0.00 2.75
2540 4202 1.473965 CGTGGTCATGGGAAGGATCTG 60.474 57.143 0.00 0.00 0.00 2.90
2541 4203 1.561542 GTGGTCATGGGAAGGATCTGT 59.438 52.381 0.00 0.00 0.00 3.41
2542 4204 2.025887 GTGGTCATGGGAAGGATCTGTT 60.026 50.000 0.00 0.00 0.00 3.16
2543 4205 2.025981 TGGTCATGGGAAGGATCTGTTG 60.026 50.000 0.00 0.00 0.00 3.33
2544 4206 2.019984 GTCATGGGAAGGATCTGTTGC 58.980 52.381 0.00 0.00 0.00 4.17
2545 4207 1.918262 TCATGGGAAGGATCTGTTGCT 59.082 47.619 0.00 0.00 0.00 3.91
2546 4208 2.022195 CATGGGAAGGATCTGTTGCTG 58.978 52.381 0.00 0.00 0.00 4.41
2547 4209 0.329261 TGGGAAGGATCTGTTGCTGG 59.671 55.000 0.00 0.00 0.00 4.85
2548 4210 0.620556 GGGAAGGATCTGTTGCTGGA 59.379 55.000 0.00 0.00 0.00 3.86
2549 4211 1.213926 GGGAAGGATCTGTTGCTGGAT 59.786 52.381 0.00 0.00 0.00 3.41
2550 4212 2.570135 GGAAGGATCTGTTGCTGGATC 58.430 52.381 0.00 0.00 38.01 3.36
2551 4213 2.208431 GAAGGATCTGTTGCTGGATCG 58.792 52.381 0.00 0.00 39.19 3.69
2552 4214 1.198713 AGGATCTGTTGCTGGATCGT 58.801 50.000 0.00 0.00 39.19 3.73
2553 4215 1.556911 AGGATCTGTTGCTGGATCGTT 59.443 47.619 0.00 0.00 39.19 3.85
2554 4216 1.936547 GGATCTGTTGCTGGATCGTTC 59.063 52.381 0.00 0.00 39.19 3.95
2555 4217 2.621338 GATCTGTTGCTGGATCGTTCA 58.379 47.619 0.00 0.00 30.80 3.18
2556 4218 2.542020 TCTGTTGCTGGATCGTTCAA 57.458 45.000 0.00 0.00 0.00 2.69
2557 4219 2.416747 TCTGTTGCTGGATCGTTCAAG 58.583 47.619 0.00 0.00 0.00 3.02
2562 4224 2.586258 GCTGGATCGTTCAAGCTAGA 57.414 50.000 14.49 0.00 44.38 2.43
2563 4225 2.197577 GCTGGATCGTTCAAGCTAGAC 58.802 52.381 14.49 0.00 44.38 2.59
2564 4226 2.417379 GCTGGATCGTTCAAGCTAGACA 60.417 50.000 14.49 0.00 44.38 3.41
2565 4227 3.443037 CTGGATCGTTCAAGCTAGACAG 58.557 50.000 0.00 0.00 0.00 3.51
2566 4228 3.089284 TGGATCGTTCAAGCTAGACAGA 58.911 45.455 0.00 0.00 0.00 3.41
2567 4229 3.119459 TGGATCGTTCAAGCTAGACAGAC 60.119 47.826 0.00 0.00 0.00 3.51
2568 4230 3.129638 GGATCGTTCAAGCTAGACAGACT 59.870 47.826 0.00 0.00 0.00 3.24
2569 4231 3.560902 TCGTTCAAGCTAGACAGACTG 57.439 47.619 0.00 0.00 0.00 3.51
2570 4232 2.885266 TCGTTCAAGCTAGACAGACTGT 59.115 45.455 8.12 8.12 0.00 3.55
2571 4233 3.318275 TCGTTCAAGCTAGACAGACTGTT 59.682 43.478 10.01 2.76 0.00 3.16
2572 4234 4.051922 CGTTCAAGCTAGACAGACTGTTT 58.948 43.478 10.01 6.72 0.00 2.83
2573 4235 4.149046 CGTTCAAGCTAGACAGACTGTTTC 59.851 45.833 10.01 0.00 0.00 2.78
2574 4236 5.293560 GTTCAAGCTAGACAGACTGTTTCT 58.706 41.667 10.01 5.81 33.33 2.52
2642 4304 1.171308 CGGACTTCTTCCAGTACGGA 58.829 55.000 0.00 0.00 45.91 4.69
2692 4354 4.340381 GTCAAAGATGGCCAAGCTCATTAT 59.660 41.667 10.96 0.00 0.00 1.28
3140 4810 1.675310 CTGCTGAATGGGTTCGCCA 60.675 57.895 0.00 0.00 39.65 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.524734 TCCGAGATTACATCAAGCACATAAT 58.475 36.000 0.00 0.00 0.00 1.28
1 2 5.912892 TCCGAGATTACATCAAGCACATAA 58.087 37.500 0.00 0.00 0.00 1.90
2 3 5.529581 TCCGAGATTACATCAAGCACATA 57.470 39.130 0.00 0.00 0.00 2.29
3 4 4.406648 TCCGAGATTACATCAAGCACAT 57.593 40.909 0.00 0.00 0.00 3.21
4 5 3.885724 TCCGAGATTACATCAAGCACA 57.114 42.857 0.00 0.00 0.00 4.57
5 6 4.210120 GTCATCCGAGATTACATCAAGCAC 59.790 45.833 0.00 0.00 0.00 4.40
6 7 4.141959 TGTCATCCGAGATTACATCAAGCA 60.142 41.667 0.00 0.00 0.00 3.91
7 8 4.371786 TGTCATCCGAGATTACATCAAGC 58.628 43.478 0.00 0.00 0.00 4.01
8 9 6.146837 GGAATGTCATCCGAGATTACATCAAG 59.853 42.308 11.59 0.00 36.07 3.02
9 10 5.991606 GGAATGTCATCCGAGATTACATCAA 59.008 40.000 11.59 0.00 36.07 2.57
10 11 5.541845 GGAATGTCATCCGAGATTACATCA 58.458 41.667 11.59 0.00 36.07 3.07
22 23 1.299541 ACGCATTCGGAATGTCATCC 58.700 50.000 26.54 12.27 41.01 3.51
23 24 3.100817 CAAACGCATTCGGAATGTCATC 58.899 45.455 26.54 12.58 41.01 2.92
24 25 2.746904 TCAAACGCATTCGGAATGTCAT 59.253 40.909 26.54 13.14 41.01 3.06
25 26 2.147150 TCAAACGCATTCGGAATGTCA 58.853 42.857 26.54 6.86 41.01 3.58
26 27 2.892373 TCAAACGCATTCGGAATGTC 57.108 45.000 26.54 18.91 41.01 3.06
27 28 3.848272 AATCAAACGCATTCGGAATGT 57.152 38.095 26.54 9.76 41.01 2.71
28 29 6.810888 ATTTAATCAAACGCATTCGGAATG 57.189 33.333 23.17 23.17 41.85 2.67
29 30 8.918961 TTTATTTAATCAAACGCATTCGGAAT 57.081 26.923 0.00 0.00 40.69 3.01
30 31 8.802856 CATTTATTTAATCAAACGCATTCGGAA 58.197 29.630 0.00 0.00 40.69 4.30
31 32 7.043722 GCATTTATTTAATCAAACGCATTCGGA 60.044 33.333 0.00 0.00 40.69 4.55
32 33 7.056800 GCATTTATTTAATCAAACGCATTCGG 58.943 34.615 0.00 0.00 40.69 4.30
33 34 6.775874 CGCATTTATTTAATCAAACGCATTCG 59.224 34.615 2.61 0.00 42.43 3.34
34 35 7.056800 CCGCATTTATTTAATCAAACGCATTC 58.943 34.615 2.61 0.00 0.00 2.67
35 36 6.509358 GCCGCATTTATTTAATCAAACGCATT 60.509 34.615 2.61 0.00 0.00 3.56
36 37 5.051106 GCCGCATTTATTTAATCAAACGCAT 60.051 36.000 2.61 0.00 0.00 4.73
37 38 4.266502 GCCGCATTTATTTAATCAAACGCA 59.733 37.500 2.61 0.00 0.00 5.24
38 39 4.266502 TGCCGCATTTATTTAATCAAACGC 59.733 37.500 0.00 0.00 0.00 4.84
39 40 5.940603 TGCCGCATTTATTTAATCAAACG 57.059 34.783 0.00 0.00 0.00 3.60
43 44 9.202273 GGAAATATTGCCGCATTTATTTAATCA 57.798 29.630 16.13 0.00 0.00 2.57
44 45 8.655970 GGGAAATATTGCCGCATTTATTTAATC 58.344 33.333 16.13 11.28 0.00 1.75
45 46 7.606073 GGGGAAATATTGCCGCATTTATTTAAT 59.394 33.333 21.94 0.19 42.93 1.40
46 47 6.931840 GGGGAAATATTGCCGCATTTATTTAA 59.068 34.615 21.94 0.00 42.93 1.52
47 48 6.268847 AGGGGAAATATTGCCGCATTTATTTA 59.731 34.615 26.97 0.00 42.93 1.40
48 49 5.071653 AGGGGAAATATTGCCGCATTTATTT 59.928 36.000 26.97 16.11 42.93 1.40
49 50 4.592778 AGGGGAAATATTGCCGCATTTATT 59.407 37.500 26.97 6.60 42.93 1.40
50 51 4.159557 AGGGGAAATATTGCCGCATTTAT 58.840 39.130 26.97 7.26 42.93 1.40
51 52 3.571590 AGGGGAAATATTGCCGCATTTA 58.428 40.909 26.97 0.00 42.93 1.40
52 53 2.365293 GAGGGGAAATATTGCCGCATTT 59.635 45.455 26.97 10.35 42.93 2.32
53 54 1.963515 GAGGGGAAATATTGCCGCATT 59.036 47.619 26.97 11.03 42.93 3.56
54 55 1.133513 TGAGGGGAAATATTGCCGCAT 60.134 47.619 26.97 14.57 42.93 4.73
55 56 0.257328 TGAGGGGAAATATTGCCGCA 59.743 50.000 26.97 13.22 42.93 5.69
56 57 1.620822 ATGAGGGGAAATATTGCCGC 58.379 50.000 19.81 19.81 42.93 6.53
57 58 5.782893 TTTTATGAGGGGAAATATTGCCG 57.217 39.130 6.37 0.00 42.93 5.69
58 59 5.983118 CGTTTTTATGAGGGGAAATATTGCC 59.017 40.000 3.49 3.49 40.98 4.52
59 60 5.462068 GCGTTTTTATGAGGGGAAATATTGC 59.538 40.000 0.00 0.00 0.00 3.56
60 61 5.685511 CGCGTTTTTATGAGGGGAAATATTG 59.314 40.000 0.00 0.00 0.00 1.90
61 62 5.358725 ACGCGTTTTTATGAGGGGAAATATT 59.641 36.000 5.58 0.00 0.00 1.28
62 63 4.885325 ACGCGTTTTTATGAGGGGAAATAT 59.115 37.500 5.58 0.00 0.00 1.28
63 64 4.263435 ACGCGTTTTTATGAGGGGAAATA 58.737 39.130 5.58 0.00 0.00 1.40
64 65 3.086282 ACGCGTTTTTATGAGGGGAAAT 58.914 40.909 5.58 0.00 0.00 2.17
65 66 2.485038 GACGCGTTTTTATGAGGGGAAA 59.515 45.455 15.53 0.00 0.00 3.13
66 67 2.078392 GACGCGTTTTTATGAGGGGAA 58.922 47.619 15.53 0.00 0.00 3.97
67 68 1.729284 GACGCGTTTTTATGAGGGGA 58.271 50.000 15.53 0.00 0.00 4.81
68 69 0.372334 CGACGCGTTTTTATGAGGGG 59.628 55.000 15.53 0.00 0.00 4.79
69 70 0.247537 GCGACGCGTTTTTATGAGGG 60.248 55.000 15.53 0.00 0.00 4.30
70 71 3.198680 GCGACGCGTTTTTATGAGG 57.801 52.632 15.53 0.00 0.00 3.86
97 98 2.484062 CCTGACGAATGGCCCATGC 61.484 63.158 0.00 0.00 0.00 4.06
98 99 0.680921 AACCTGACGAATGGCCCATG 60.681 55.000 0.00 0.00 0.00 3.66
99 100 0.039618 AAACCTGACGAATGGCCCAT 59.960 50.000 0.00 0.00 0.00 4.00
100 101 0.178975 AAAACCTGACGAATGGCCCA 60.179 50.000 0.00 0.00 0.00 5.36
101 102 0.966179 AAAAACCTGACGAATGGCCC 59.034 50.000 0.00 0.00 0.00 5.80
122 123 9.570488 CGCCTTCTAATTATTATCTACAGTACC 57.430 37.037 0.00 0.00 0.00 3.34
178 182 2.953640 TAATGTCGCACAAACGAACC 57.046 45.000 0.00 0.00 44.93 3.62
234 238 2.883574 CAGCCGTGTCGTTTCCTAATA 58.116 47.619 0.00 0.00 0.00 0.98
276 280 0.400213 TGATGGGTTGAGGTGGTCAC 59.600 55.000 0.00 0.00 33.71 3.67
284 288 4.063689 GCTAGATGTGATGATGGGTTGAG 58.936 47.826 0.00 0.00 0.00 3.02
285 289 3.455543 TGCTAGATGTGATGATGGGTTGA 59.544 43.478 0.00 0.00 0.00 3.18
286 290 3.562973 GTGCTAGATGTGATGATGGGTTG 59.437 47.826 0.00 0.00 0.00 3.77
287 291 3.457380 AGTGCTAGATGTGATGATGGGTT 59.543 43.478 0.00 0.00 0.00 4.11
288 292 3.044156 AGTGCTAGATGTGATGATGGGT 58.956 45.455 0.00 0.00 0.00 4.51
289 293 3.556633 GGAGTGCTAGATGTGATGATGGG 60.557 52.174 0.00 0.00 0.00 4.00
290 294 3.070590 TGGAGTGCTAGATGTGATGATGG 59.929 47.826 0.00 0.00 0.00 3.51
291 295 4.332428 TGGAGTGCTAGATGTGATGATG 57.668 45.455 0.00 0.00 0.00 3.07
292 296 5.512749 GGAATGGAGTGCTAGATGTGATGAT 60.513 44.000 0.00 0.00 0.00 2.45
293 297 4.202295 GGAATGGAGTGCTAGATGTGATGA 60.202 45.833 0.00 0.00 0.00 2.92
294 298 4.063689 GGAATGGAGTGCTAGATGTGATG 58.936 47.826 0.00 0.00 0.00 3.07
316 326 1.774894 TTTGGGTTGAGAGGGGACGG 61.775 60.000 0.00 0.00 0.00 4.79
318 328 1.003696 CTCTTTGGGTTGAGAGGGGAC 59.996 57.143 0.00 0.00 36.58 4.46
332 342 5.648526 TCTCTGCTAGTGGTACTACTCTTTG 59.351 44.000 15.92 6.25 32.19 2.77
419 461 2.278531 GCCGGTTGTGTTGTGTGC 60.279 61.111 1.90 0.00 0.00 4.57
497 566 3.372458 GGGATGGAATGGAAGAGCTCTTT 60.372 47.826 29.02 14.14 36.11 2.52
498 567 2.174424 GGGATGGAATGGAAGAGCTCTT 59.826 50.000 28.83 28.83 39.23 2.85
499 568 1.773653 GGGATGGAATGGAAGAGCTCT 59.226 52.381 11.45 11.45 0.00 4.09
500 569 1.492176 TGGGATGGAATGGAAGAGCTC 59.508 52.381 5.27 5.27 0.00 4.09
549 1262 3.632145 GGCCGACCAATAAACAAGATGAT 59.368 43.478 0.00 0.00 35.26 2.45
574 1287 0.968393 GCCCTTGACCGAGAGAGAGT 60.968 60.000 0.00 0.00 0.00 3.24
698 1699 8.437742 GGTAATGAATTGAAATGCAAGAACAAG 58.562 33.333 0.00 0.00 40.42 3.16
777 1783 5.360649 AGCATCCTCCTCATCATGATATG 57.639 43.478 8.15 7.85 0.00 1.78
1330 2339 6.313411 CCACATGAGAAAACAAACACAACAAT 59.687 34.615 0.00 0.00 0.00 2.71
1331 2340 5.636965 CCACATGAGAAAACAAACACAACAA 59.363 36.000 0.00 0.00 0.00 2.83
1334 2343 5.398603 ACCACATGAGAAAACAAACACAA 57.601 34.783 0.00 0.00 0.00 3.33
1342 2351 9.394477 GTAATAGTTGAAACCACATGAGAAAAC 57.606 33.333 0.00 0.00 0.00 2.43
1394 2408 5.692115 ACCATTCCAGAAAACCACTTTTT 57.308 34.783 0.00 0.00 40.30 1.94
1396 2410 5.692115 AAACCATTCCAGAAAACCACTTT 57.308 34.783 0.00 0.00 0.00 2.66
1397 2411 5.692115 AAAACCATTCCAGAAAACCACTT 57.308 34.783 0.00 0.00 0.00 3.16
1398 2412 5.692115 AAAAACCATTCCAGAAAACCACT 57.308 34.783 0.00 0.00 0.00 4.00
1418 2841 6.993786 TGTTGAGAATGTGTGTCAGTAAAA 57.006 33.333 0.00 0.00 0.00 1.52
1423 2846 3.438087 GGGATGTTGAGAATGTGTGTCAG 59.562 47.826 0.00 0.00 0.00 3.51
1424 2847 3.072915 AGGGATGTTGAGAATGTGTGTCA 59.927 43.478 0.00 0.00 0.00 3.58
1428 2851 3.328931 ACTGAGGGATGTTGAGAATGTGT 59.671 43.478 0.00 0.00 0.00 3.72
1429 2852 3.947868 ACTGAGGGATGTTGAGAATGTG 58.052 45.455 0.00 0.00 0.00 3.21
1430 2853 4.647564 AACTGAGGGATGTTGAGAATGT 57.352 40.909 0.00 0.00 0.00 2.71
1431 2854 7.636150 AAATAACTGAGGGATGTTGAGAATG 57.364 36.000 0.00 0.00 0.00 2.67
1433 2856 8.146053 TCTAAATAACTGAGGGATGTTGAGAA 57.854 34.615 0.00 0.00 0.00 2.87
1434 2857 7.733773 TCTAAATAACTGAGGGATGTTGAGA 57.266 36.000 0.00 0.00 0.00 3.27
1435 2858 8.834465 CATTCTAAATAACTGAGGGATGTTGAG 58.166 37.037 0.00 0.00 0.00 3.02
1437 2860 7.557719 ACCATTCTAAATAACTGAGGGATGTTG 59.442 37.037 0.00 0.00 0.00 3.33
1439 2862 7.213178 ACCATTCTAAATAACTGAGGGATGT 57.787 36.000 0.00 0.00 0.00 3.06
1441 2864 9.547279 AAAAACCATTCTAAATAACTGAGGGAT 57.453 29.630 0.00 0.00 0.00 3.85
1469 3088 6.949352 AAAAGATTGAGAATGTGTGTCAGT 57.051 33.333 0.00 0.00 0.00 3.41
1472 3091 9.994432 CCTAATAAAAGATTGAGAATGTGTGTC 57.006 33.333 0.00 0.00 0.00 3.67
1502 3121 6.306987 ACACTTCTCCATGTATTTCCACTTT 58.693 36.000 0.00 0.00 0.00 2.66
1516 3135 1.801242 TGTCCTCCAACACTTCTCCA 58.199 50.000 0.00 0.00 0.00 3.86
1517 3136 3.077359 CAATGTCCTCCAACACTTCTCC 58.923 50.000 0.00 0.00 30.55 3.71
1519 3138 2.508526 GCAATGTCCTCCAACACTTCT 58.491 47.619 0.00 0.00 30.55 2.85
1551 3170 3.753797 CGACGGATTCTCATAGAGATCCA 59.246 47.826 17.56 0.06 38.56 3.41
1575 3194 1.071385 AGCCTAGATCATTTGCCTCCG 59.929 52.381 0.00 0.00 0.00 4.63
1577 3196 2.371510 AGGAGCCTAGATCATTTGCCTC 59.628 50.000 0.00 0.00 0.00 4.70
1580 3199 3.549794 ACAAGGAGCCTAGATCATTTGC 58.450 45.455 0.00 0.00 0.00 3.68
1583 3202 6.156949 TGAAAGTACAAGGAGCCTAGATCATT 59.843 38.462 0.00 0.00 0.00 2.57
1587 3206 4.777896 TGTGAAAGTACAAGGAGCCTAGAT 59.222 41.667 0.00 0.00 0.00 1.98
1590 3209 3.644265 TGTGTGAAAGTACAAGGAGCCTA 59.356 43.478 0.00 0.00 31.36 3.93
1603 3222 5.907197 ACAATACGAAGAGTGTGTGAAAG 57.093 39.130 0.00 0.00 33.11 2.62
1615 3234 4.438744 GGGCATTCTCCAAACAATACGAAG 60.439 45.833 0.00 0.00 0.00 3.79
1652 3271 1.202734 GCCAGCAGAGCTATCATCCAA 60.203 52.381 0.00 0.00 36.40 3.53
1654 3273 0.395686 TGCCAGCAGAGCTATCATCC 59.604 55.000 0.00 0.00 36.40 3.51
1679 3298 7.173047 AGGATGAACATATTTTTGGTGTTTTGC 59.827 33.333 0.00 0.00 36.30 3.68
1681 3300 8.650490 AGAGGATGAACATATTTTTGGTGTTTT 58.350 29.630 0.00 0.00 36.30 2.43
1692 3311 5.221803 CCTGTGCCTAGAGGATGAACATATT 60.222 44.000 0.00 0.00 39.70 1.28
1700 3319 0.106335 CAGCCTGTGCCTAGAGGATG 59.894 60.000 0.00 0.00 45.64 3.51
1717 3336 8.980610 CAGCTTTTGATAAGATCATAGAGACAG 58.019 37.037 0.00 0.00 39.39 3.51
1735 3354 3.066760 ACGAAACCTTCTTCCAGCTTTTG 59.933 43.478 0.00 0.00 0.00 2.44
1739 3358 2.640316 AACGAAACCTTCTTCCAGCT 57.360 45.000 0.00 0.00 0.00 4.24
1751 3370 5.358298 AGCAAGAAGATGGTAAACGAAAC 57.642 39.130 0.00 0.00 0.00 2.78
1759 3378 3.941483 GCAGCTTTAGCAAGAAGATGGTA 59.059 43.478 11.96 0.00 45.16 3.25
1798 3417 6.457355 TGTTTGCTTGATAACAGCAATCATT 58.543 32.000 12.27 0.00 46.07 2.57
1809 3428 1.899142 GGGGCCTTGTTTGCTTGATAA 59.101 47.619 0.84 0.00 0.00 1.75
1835 3454 3.555168 GGACTGACCTTCGAAACATCACT 60.555 47.826 0.00 0.00 35.41 3.41
1866 3485 1.475682 CTGCCTCATCAAAAAGAGCCC 59.524 52.381 0.00 0.00 0.00 5.19
1873 3492 1.308069 GCGCCTCTGCCTCATCAAAA 61.308 55.000 0.00 0.00 0.00 2.44
1886 3505 0.388659 ATCATCTCTCTGTGCGCCTC 59.611 55.000 4.18 0.00 0.00 4.70
1889 3508 1.859703 CAGAATCATCTCTCTGTGCGC 59.140 52.381 0.00 0.00 35.38 6.09
1890 3509 2.100418 TCCAGAATCATCTCTCTGTGCG 59.900 50.000 0.00 0.00 37.89 5.34
1898 3517 3.212685 CCAGCCTTTCCAGAATCATCTC 58.787 50.000 0.00 0.00 32.03 2.75
1902 3521 0.700564 AGCCAGCCTTTCCAGAATCA 59.299 50.000 0.00 0.00 0.00 2.57
1931 3550 3.119101 TCGTCAAGCTCCTTTGTATCCTC 60.119 47.826 0.00 0.00 0.00 3.71
1937 3556 2.614057 CAAACTCGTCAAGCTCCTTTGT 59.386 45.455 0.00 0.00 0.00 2.83
1945 3564 0.308993 AAGCAGCAAACTCGTCAAGC 59.691 50.000 0.00 0.00 0.00 4.01
1953 3572 2.543641 GCTTGTTCAAAGCAGCAAACT 58.456 42.857 5.23 0.00 42.56 2.66
1978 3597 0.518636 CAACACCGTCAGCCTCAATG 59.481 55.000 0.00 0.00 0.00 2.82
1995 3614 4.555709 AGGTTGCGTCGCCCACAA 62.556 61.111 15.88 0.00 0.00 3.33
2030 3649 0.034896 TTGACGAGGTGAAGGAAGCC 59.965 55.000 0.00 0.00 0.00 4.35
2049 3668 3.244422 TGGCACAAGGTCTTTATCGAACT 60.244 43.478 0.00 0.00 31.92 3.01
2056 3675 4.469945 AGTATAGCTGGCACAAGGTCTTTA 59.530 41.667 0.00 0.00 38.70 1.85
2086 3705 3.181496 GCTTACCCTGAAAGTTATGCTGC 60.181 47.826 0.00 0.00 0.00 5.25
2090 3709 3.871594 CCGAGCTTACCCTGAAAGTTATG 59.128 47.826 0.00 0.00 0.00 1.90
2093 3712 1.697982 ACCGAGCTTACCCTGAAAGTT 59.302 47.619 0.00 0.00 0.00 2.66
2105 3724 3.077359 CCTGAAGATTCAAACCGAGCTT 58.923 45.455 0.00 0.00 36.64 3.74
2106 3725 2.039084 ACCTGAAGATTCAAACCGAGCT 59.961 45.455 0.00 0.00 36.64 4.09
2131 3750 1.531149 CTGGTCACAAGGTTTGCTACG 59.469 52.381 0.00 0.00 0.00 3.51
2135 3754 1.338020 CCTTCTGGTCACAAGGTTTGC 59.662 52.381 0.00 0.00 35.34 3.68
2140 3759 3.403038 CAACTACCTTCTGGTCACAAGG 58.597 50.000 3.91 3.91 44.78 3.61
2141 3760 2.808543 GCAACTACCTTCTGGTCACAAG 59.191 50.000 0.00 0.00 44.78 3.16
2142 3761 2.438021 AGCAACTACCTTCTGGTCACAA 59.562 45.455 0.00 0.00 44.78 3.33
2143 3762 2.047061 AGCAACTACCTTCTGGTCACA 58.953 47.619 0.00 0.00 44.78 3.58
2155 3774 3.587797 TGCTACAGGTACAGCAACTAC 57.412 47.619 3.29 0.00 44.49 2.73
2162 3781 3.740115 ACAAGGTTTGCTACAGGTACAG 58.260 45.455 0.00 0.00 0.00 2.74
2168 3787 3.740115 ACAGGTACAAGGTTTGCTACAG 58.260 45.455 0.00 0.00 0.00 2.74
2169 3788 3.849563 ACAGGTACAAGGTTTGCTACA 57.150 42.857 0.00 0.00 0.00 2.74
2170 3789 4.891260 ACTACAGGTACAAGGTTTGCTAC 58.109 43.478 0.00 0.00 0.00 3.58
2171 3790 6.669125 TTACTACAGGTACAAGGTTTGCTA 57.331 37.500 0.00 0.00 0.00 3.49
2172 3791 5.556006 TTACTACAGGTACAAGGTTTGCT 57.444 39.130 0.00 0.00 0.00 3.91
2173 3792 6.812879 ATTTACTACAGGTACAAGGTTTGC 57.187 37.500 0.00 0.00 0.00 3.68
2174 3793 8.385898 TGAATTTACTACAGGTACAAGGTTTG 57.614 34.615 0.00 0.00 0.00 2.93
2175 3794 9.227777 GATGAATTTACTACAGGTACAAGGTTT 57.772 33.333 0.00 0.00 0.00 3.27
2176 3795 7.827729 GGATGAATTTACTACAGGTACAAGGTT 59.172 37.037 0.00 0.00 0.00 3.50
2177 3796 7.037873 TGGATGAATTTACTACAGGTACAAGGT 60.038 37.037 0.00 0.00 0.00 3.50
2178 3797 7.335627 TGGATGAATTTACTACAGGTACAAGG 58.664 38.462 0.00 0.00 0.00 3.61
2179 3798 7.495934 CCTGGATGAATTTACTACAGGTACAAG 59.504 40.741 0.00 0.00 39.24 3.16
2194 3813 4.246712 ACAGCATTCTCCTGGATGAATT 57.753 40.909 14.68 4.12 34.65 2.17
2205 3824 5.632347 CACAATTCTCCAAAACAGCATTCTC 59.368 40.000 0.00 0.00 0.00 2.87
2206 3825 5.069516 ACACAATTCTCCAAAACAGCATTCT 59.930 36.000 0.00 0.00 0.00 2.40
2214 3843 8.330302 CAAAGAATTGACACAATTCTCCAAAAC 58.670 33.333 27.96 9.07 43.87 2.43
2220 3849 6.211515 ACAGCAAAGAATTGACACAATTCTC 58.788 36.000 27.96 19.87 43.87 2.87
2226 3855 4.136796 AGCTACAGCAAAGAATTGACACA 58.863 39.130 3.70 0.00 45.16 3.72
2227 3856 4.378874 GGAGCTACAGCAAAGAATTGACAC 60.379 45.833 3.70 0.00 45.16 3.67
2230 3877 3.753272 GTGGAGCTACAGCAAAGAATTGA 59.247 43.478 0.00 0.00 45.16 2.57
2234 3881 1.271379 GGGTGGAGCTACAGCAAAGAA 60.271 52.381 28.50 0.00 45.16 2.52
2236 3883 0.326264 AGGGTGGAGCTACAGCAAAG 59.674 55.000 28.50 0.00 45.16 2.77
2237 3891 0.036732 CAGGGTGGAGCTACAGCAAA 59.963 55.000 28.50 0.00 45.16 3.68
2247 3901 0.326618 AGGTACATCCCAGGGTGGAG 60.327 60.000 5.01 0.00 40.96 3.86
2252 3906 2.176247 ACTACAGGTACATCCCAGGG 57.824 55.000 0.00 0.00 36.75 4.45
2263 3917 3.415212 TGCAACTCGTAGTACTACAGGT 58.585 45.455 28.03 22.12 35.87 4.00
2266 3920 4.082408 AGCATTGCAACTCGTAGTACTACA 60.082 41.667 28.03 16.24 35.87 2.74
2267 3921 4.421948 AGCATTGCAACTCGTAGTACTAC 58.578 43.478 21.06 21.06 0.00 2.73
2269 3923 3.512680 GAGCATTGCAACTCGTAGTACT 58.487 45.455 11.91 0.00 0.00 2.73
2270 3924 3.909019 GAGCATTGCAACTCGTAGTAC 57.091 47.619 11.91 0.00 0.00 2.73
2359 4021 2.347755 CGTCTGCATGACAATGTCAGAG 59.652 50.000 21.23 16.38 46.04 3.35
2365 4027 4.380678 CAGTTTTTCGTCTGCATGACAATG 59.619 41.667 14.09 3.28 45.60 2.82
2367 4029 3.951306 CAGTTTTTCGTCTGCATGACAA 58.049 40.909 14.09 6.93 45.60 3.18
2368 4030 3.607422 CAGTTTTTCGTCTGCATGACA 57.393 42.857 14.09 0.00 45.60 3.58
2375 4037 6.602179 TGAAGAATATGCAGTTTTTCGTCTG 58.398 36.000 13.46 0.00 30.93 3.51
2376 4038 6.801539 TGAAGAATATGCAGTTTTTCGTCT 57.198 33.333 13.46 0.00 30.93 4.18
2377 4039 6.032880 GCTTGAAGAATATGCAGTTTTTCGTC 59.967 38.462 0.00 9.79 0.00 4.20
2379 4041 6.033196 CAGCTTGAAGAATATGCAGTTTTTCG 59.967 38.462 0.00 2.91 0.00 3.46
2380 4042 6.309737 CCAGCTTGAAGAATATGCAGTTTTTC 59.690 38.462 0.00 9.59 0.00 2.29
2381 4043 6.015180 TCCAGCTTGAAGAATATGCAGTTTTT 60.015 34.615 0.00 0.00 0.00 1.94
2384 4046 4.397417 GTCCAGCTTGAAGAATATGCAGTT 59.603 41.667 0.00 0.00 0.00 3.16
2385 4047 3.944015 GTCCAGCTTGAAGAATATGCAGT 59.056 43.478 0.00 0.00 0.00 4.40
2386 4048 3.943381 TGTCCAGCTTGAAGAATATGCAG 59.057 43.478 0.00 0.00 0.00 4.41
2387 4049 3.943381 CTGTCCAGCTTGAAGAATATGCA 59.057 43.478 0.00 0.00 0.00 3.96
2388 4050 4.194640 TCTGTCCAGCTTGAAGAATATGC 58.805 43.478 0.00 0.00 0.00 3.14
2389 4051 6.939132 AATCTGTCCAGCTTGAAGAATATG 57.061 37.500 0.00 0.00 0.00 1.78
2391 4053 9.547753 GTAATAATCTGTCCAGCTTGAAGAATA 57.452 33.333 0.00 0.00 0.00 1.75
2392 4054 8.270744 AGTAATAATCTGTCCAGCTTGAAGAAT 58.729 33.333 0.00 0.00 0.00 2.40
2393 4055 7.624549 AGTAATAATCTGTCCAGCTTGAAGAA 58.375 34.615 0.00 0.00 0.00 2.52
2394 4056 7.187824 AGTAATAATCTGTCCAGCTTGAAGA 57.812 36.000 0.00 0.00 0.00 2.87
2395 4057 6.481644 GGAGTAATAATCTGTCCAGCTTGAAG 59.518 42.308 0.00 0.00 0.00 3.02
2396 4058 6.349300 GGAGTAATAATCTGTCCAGCTTGAA 58.651 40.000 0.00 0.00 0.00 2.69
2397 4059 5.163301 GGGAGTAATAATCTGTCCAGCTTGA 60.163 44.000 0.00 0.00 0.00 3.02
2398 4060 5.059833 GGGAGTAATAATCTGTCCAGCTTG 58.940 45.833 0.00 0.00 0.00 4.01
2399 4061 4.971924 AGGGAGTAATAATCTGTCCAGCTT 59.028 41.667 0.00 0.00 0.00 3.74
2400 4062 4.561752 AGGGAGTAATAATCTGTCCAGCT 58.438 43.478 0.00 0.00 0.00 4.24
2401 4063 4.262678 GGAGGGAGTAATAATCTGTCCAGC 60.263 50.000 4.73 0.00 0.00 4.85
2402 4064 4.021894 CGGAGGGAGTAATAATCTGTCCAG 60.022 50.000 8.70 0.00 0.00 3.86
2403 4065 3.895656 CGGAGGGAGTAATAATCTGTCCA 59.104 47.826 8.70 0.00 0.00 4.02
2404 4066 3.896272 ACGGAGGGAGTAATAATCTGTCC 59.104 47.826 0.00 0.80 0.00 4.02
2405 4067 4.828387 AGACGGAGGGAGTAATAATCTGTC 59.172 45.833 4.66 4.66 43.51 3.51
2406 4068 4.805744 AGACGGAGGGAGTAATAATCTGT 58.194 43.478 0.00 0.00 32.29 3.41
2407 4069 4.827835 TGAGACGGAGGGAGTAATAATCTG 59.172 45.833 0.00 0.00 0.00 2.90
2408 4070 5.063017 TGAGACGGAGGGAGTAATAATCT 57.937 43.478 0.00 0.00 0.00 2.40
2409 4071 5.986501 ATGAGACGGAGGGAGTAATAATC 57.013 43.478 0.00 0.00 0.00 1.75
2410 4072 9.716556 ATATTATGAGACGGAGGGAGTAATAAT 57.283 33.333 0.00 0.00 0.00 1.28
2413 4075 9.191479 CTTATATTATGAGACGGAGGGAGTAAT 57.809 37.037 0.00 0.00 0.00 1.89
2414 4076 8.388589 TCTTATATTATGAGACGGAGGGAGTAA 58.611 37.037 0.00 0.00 0.00 2.24
2415 4077 7.925622 TCTTATATTATGAGACGGAGGGAGTA 58.074 38.462 0.00 0.00 0.00 2.59
2416 4078 6.791371 TCTTATATTATGAGACGGAGGGAGT 58.209 40.000 0.00 0.00 0.00 3.85
2417 4079 6.183360 GCTCTTATATTATGAGACGGAGGGAG 60.183 46.154 0.00 0.00 33.20 4.30
2418 4080 5.652891 GCTCTTATATTATGAGACGGAGGGA 59.347 44.000 0.00 0.00 33.20 4.20
2419 4081 5.449314 CGCTCTTATATTATGAGACGGAGGG 60.449 48.000 0.00 0.00 33.20 4.30
2420 4082 5.124138 ACGCTCTTATATTATGAGACGGAGG 59.876 44.000 16.71 3.20 35.72 4.30
2421 4083 6.184580 ACGCTCTTATATTATGAGACGGAG 57.815 41.667 16.71 6.33 35.72 4.63
2422 4084 6.570672 AACGCTCTTATATTATGAGACGGA 57.429 37.500 16.71 0.00 35.72 4.69
2423 4085 7.639162 AAAACGCTCTTATATTATGAGACGG 57.361 36.000 16.71 7.11 35.72 4.79
2424 4086 8.752254 TCAAAAACGCTCTTATATTATGAGACG 58.248 33.333 13.57 13.57 36.53 4.18
2425 4087 9.851043 GTCAAAAACGCTCTTATATTATGAGAC 57.149 33.333 0.00 0.00 33.20 3.36
2426 4088 9.594478 TGTCAAAAACGCTCTTATATTATGAGA 57.406 29.630 0.00 0.00 33.20 3.27
2427 4089 9.638300 GTGTCAAAAACGCTCTTATATTATGAG 57.362 33.333 0.00 0.00 35.42 2.90
2428 4090 9.378551 AGTGTCAAAAACGCTCTTATATTATGA 57.621 29.630 0.00 0.00 45.69 2.15
2434 4096 9.865321 AAGTATAGTGTCAAAAACGCTCTTATA 57.135 29.630 0.00 0.00 45.69 0.98
2435 4097 8.656849 CAAGTATAGTGTCAAAAACGCTCTTAT 58.343 33.333 0.00 0.00 45.69 1.73
2436 4098 7.654520 ACAAGTATAGTGTCAAAAACGCTCTTA 59.345 33.333 0.00 0.00 45.69 2.10
2437 4099 6.482308 ACAAGTATAGTGTCAAAAACGCTCTT 59.518 34.615 0.00 0.00 45.69 2.85
2438 4100 5.989777 ACAAGTATAGTGTCAAAAACGCTCT 59.010 36.000 0.00 0.00 45.69 4.09
2439 4101 6.071463 CACAAGTATAGTGTCAAAAACGCTC 58.929 40.000 0.00 0.00 45.69 5.03
2440 4102 5.526111 ACACAAGTATAGTGTCAAAAACGCT 59.474 36.000 0.00 0.00 46.57 5.07
2441 4103 5.744490 ACACAAGTATAGTGTCAAAAACGC 58.256 37.500 0.00 0.00 46.57 4.84
2451 4113 4.152402 AGCGCTTTTGACACAAGTATAGTG 59.848 41.667 2.64 0.00 42.56 2.74
2452 4114 4.315803 AGCGCTTTTGACACAAGTATAGT 58.684 39.130 2.64 0.00 0.00 2.12
2453 4115 4.627467 AGAGCGCTTTTGACACAAGTATAG 59.373 41.667 13.26 0.00 0.00 1.31
2454 4116 4.566004 AGAGCGCTTTTGACACAAGTATA 58.434 39.130 13.26 0.00 0.00 1.47
2455 4117 3.403038 AGAGCGCTTTTGACACAAGTAT 58.597 40.909 13.26 0.00 0.00 2.12
2456 4118 2.833794 AGAGCGCTTTTGACACAAGTA 58.166 42.857 13.26 0.00 0.00 2.24
2457 4119 1.668419 AGAGCGCTTTTGACACAAGT 58.332 45.000 13.26 0.00 0.00 3.16
2458 4120 2.763249 AAGAGCGCTTTTGACACAAG 57.237 45.000 13.26 0.00 0.00 3.16
2459 4121 6.494893 AATATAAGAGCGCTTTTGACACAA 57.505 33.333 22.35 2.21 35.56 3.33
2460 4122 7.254761 CCATAATATAAGAGCGCTTTTGACACA 60.255 37.037 22.35 2.97 35.56 3.72
2461 4123 7.072030 CCATAATATAAGAGCGCTTTTGACAC 58.928 38.462 22.35 2.46 35.56 3.67
2462 4124 6.204688 CCCATAATATAAGAGCGCTTTTGACA 59.795 38.462 22.35 8.10 35.56 3.58
2463 4125 6.426937 TCCCATAATATAAGAGCGCTTTTGAC 59.573 38.462 22.35 4.04 35.56 3.18
2464 4126 6.426937 GTCCCATAATATAAGAGCGCTTTTGA 59.573 38.462 22.35 11.00 35.56 2.69
2465 4127 6.204688 TGTCCCATAATATAAGAGCGCTTTTG 59.795 38.462 22.35 5.08 35.56 2.44
2466 4128 6.204882 GTGTCCCATAATATAAGAGCGCTTTT 59.795 38.462 17.98 17.98 35.56 2.27
2467 4129 5.701290 GTGTCCCATAATATAAGAGCGCTTT 59.299 40.000 13.26 1.42 35.56 3.51
2468 4130 5.238583 GTGTCCCATAATATAAGAGCGCTT 58.761 41.667 13.26 8.09 38.15 4.68
2469 4131 4.322801 GGTGTCCCATAATATAAGAGCGCT 60.323 45.833 11.27 11.27 0.00 5.92
2470 4132 3.933332 GGTGTCCCATAATATAAGAGCGC 59.067 47.826 0.00 0.00 0.00 5.92
2471 4133 4.174009 CGGTGTCCCATAATATAAGAGCG 58.826 47.826 0.00 0.00 0.00 5.03
2472 4134 4.929808 CACGGTGTCCCATAATATAAGAGC 59.070 45.833 0.00 0.00 0.00 4.09
2473 4135 6.097915 ACACGGTGTCCCATAATATAAGAG 57.902 41.667 8.21 0.00 0.00 2.85
2474 4136 6.488769 AACACGGTGTCCCATAATATAAGA 57.511 37.500 15.09 0.00 0.00 2.10
2475 4137 8.717821 CAATAACACGGTGTCCCATAATATAAG 58.282 37.037 15.09 0.72 0.00 1.73
2476 4138 7.662258 CCAATAACACGGTGTCCCATAATATAA 59.338 37.037 15.09 0.00 0.00 0.98
2477 4139 7.162761 CCAATAACACGGTGTCCCATAATATA 58.837 38.462 15.09 0.08 0.00 0.86
2478 4140 6.001460 CCAATAACACGGTGTCCCATAATAT 58.999 40.000 15.09 4.02 0.00 1.28
2479 4141 5.104444 ACCAATAACACGGTGTCCCATAATA 60.104 40.000 15.09 1.59 33.05 0.98
2480 4142 4.204012 CCAATAACACGGTGTCCCATAAT 58.796 43.478 15.09 0.00 0.00 1.28
2481 4143 3.009253 ACCAATAACACGGTGTCCCATAA 59.991 43.478 15.09 0.00 33.05 1.90
2482 4144 2.572556 ACCAATAACACGGTGTCCCATA 59.427 45.455 15.09 3.50 33.05 2.74
2483 4145 1.353022 ACCAATAACACGGTGTCCCAT 59.647 47.619 15.09 5.76 33.05 4.00
2484 4146 0.766131 ACCAATAACACGGTGTCCCA 59.234 50.000 15.09 3.49 33.05 4.37
2485 4147 1.900245 AACCAATAACACGGTGTCCC 58.100 50.000 15.09 0.00 35.08 4.46
2486 4148 3.437741 CCTAAACCAATAACACGGTGTCC 59.562 47.826 15.09 0.00 35.08 4.02
2487 4149 4.067192 ACCTAAACCAATAACACGGTGTC 58.933 43.478 15.09 0.00 35.08 3.67
2488 4150 3.816523 CACCTAAACCAATAACACGGTGT 59.183 43.478 8.21 8.21 36.73 4.16
2489 4151 3.365565 GCACCTAAACCAATAACACGGTG 60.366 47.826 6.58 6.58 42.58 4.94
2490 4152 2.815503 GCACCTAAACCAATAACACGGT 59.184 45.455 0.00 0.00 36.98 4.83
2491 4153 3.078837 AGCACCTAAACCAATAACACGG 58.921 45.455 0.00 0.00 0.00 4.94
2492 4154 3.119990 CCAGCACCTAAACCAATAACACG 60.120 47.826 0.00 0.00 0.00 4.49
2493 4155 3.192633 CCCAGCACCTAAACCAATAACAC 59.807 47.826 0.00 0.00 0.00 3.32
2494 4156 3.426615 CCCAGCACCTAAACCAATAACA 58.573 45.455 0.00 0.00 0.00 2.41
2495 4157 2.165641 GCCCAGCACCTAAACCAATAAC 59.834 50.000 0.00 0.00 0.00 1.89
2496 4158 2.452505 GCCCAGCACCTAAACCAATAA 58.547 47.619 0.00 0.00 0.00 1.40
2497 4159 1.680555 CGCCCAGCACCTAAACCAATA 60.681 52.381 0.00 0.00 0.00 1.90
2498 4160 0.965363 CGCCCAGCACCTAAACCAAT 60.965 55.000 0.00 0.00 0.00 3.16
2499 4161 1.602323 CGCCCAGCACCTAAACCAA 60.602 57.895 0.00 0.00 0.00 3.67
2500 4162 2.033448 CGCCCAGCACCTAAACCA 59.967 61.111 0.00 0.00 0.00 3.67
2511 4173 4.457496 ATGACCACGAGCGCCCAG 62.457 66.667 2.29 0.00 0.00 4.45
2512 4174 4.758251 CATGACCACGAGCGCCCA 62.758 66.667 2.29 0.00 0.00 5.36
2515 4177 3.950794 TTCCCATGACCACGAGCGC 62.951 63.158 0.00 0.00 0.00 5.92
2516 4178 1.811266 CTTCCCATGACCACGAGCG 60.811 63.158 0.00 0.00 0.00 5.03
2517 4179 1.450312 CCTTCCCATGACCACGAGC 60.450 63.158 0.00 0.00 0.00 5.03
2518 4180 0.833287 ATCCTTCCCATGACCACGAG 59.167 55.000 0.00 0.00 0.00 4.18
2519 4181 0.830648 GATCCTTCCCATGACCACGA 59.169 55.000 0.00 0.00 0.00 4.35
2520 4182 0.833287 AGATCCTTCCCATGACCACG 59.167 55.000 0.00 0.00 0.00 4.94
2521 4183 1.561542 ACAGATCCTTCCCATGACCAC 59.438 52.381 0.00 0.00 0.00 4.16
2522 4184 1.971149 ACAGATCCTTCCCATGACCA 58.029 50.000 0.00 0.00 0.00 4.02
2523 4185 2.648059 CAACAGATCCTTCCCATGACC 58.352 52.381 0.00 0.00 0.00 4.02
2524 4186 2.019984 GCAACAGATCCTTCCCATGAC 58.980 52.381 0.00 0.00 0.00 3.06
2525 4187 1.918262 AGCAACAGATCCTTCCCATGA 59.082 47.619 0.00 0.00 0.00 3.07
2526 4188 2.022195 CAGCAACAGATCCTTCCCATG 58.978 52.381 0.00 0.00 0.00 3.66
2527 4189 1.064166 CCAGCAACAGATCCTTCCCAT 60.064 52.381 0.00 0.00 0.00 4.00
2528 4190 0.329261 CCAGCAACAGATCCTTCCCA 59.671 55.000 0.00 0.00 0.00 4.37
2529 4191 0.620556 TCCAGCAACAGATCCTTCCC 59.379 55.000 0.00 0.00 0.00 3.97
2530 4192 2.570135 GATCCAGCAACAGATCCTTCC 58.430 52.381 0.00 0.00 34.11 3.46
2531 4193 2.208431 CGATCCAGCAACAGATCCTTC 58.792 52.381 0.00 0.00 36.36 3.46
2532 4194 1.556911 ACGATCCAGCAACAGATCCTT 59.443 47.619 0.00 0.00 36.36 3.36
2533 4195 1.198713 ACGATCCAGCAACAGATCCT 58.801 50.000 0.00 0.00 36.36 3.24
2534 4196 1.936547 GAACGATCCAGCAACAGATCC 59.063 52.381 0.00 0.00 36.36 3.36
2535 4197 2.621338 TGAACGATCCAGCAACAGATC 58.379 47.619 0.00 0.00 36.38 2.75
2536 4198 2.768253 TGAACGATCCAGCAACAGAT 57.232 45.000 0.00 0.00 0.00 2.90
2537 4199 2.416747 CTTGAACGATCCAGCAACAGA 58.583 47.619 0.00 0.00 0.00 3.41
2538 4200 1.135859 GCTTGAACGATCCAGCAACAG 60.136 52.381 13.01 0.00 42.42 3.16
2539 4201 0.874390 GCTTGAACGATCCAGCAACA 59.126 50.000 13.01 0.00 42.42 3.33
2540 4202 1.160137 AGCTTGAACGATCCAGCAAC 58.840 50.000 18.82 0.00 44.64 4.17
2541 4203 2.233676 TCTAGCTTGAACGATCCAGCAA 59.766 45.455 18.82 3.62 44.64 3.91
2542 4204 1.824852 TCTAGCTTGAACGATCCAGCA 59.175 47.619 18.82 6.23 44.64 4.41
2543 4205 2.197577 GTCTAGCTTGAACGATCCAGC 58.802 52.381 10.34 10.34 43.02 4.85
2544 4206 3.129462 TCTGTCTAGCTTGAACGATCCAG 59.871 47.826 0.00 2.41 0.00 3.86
2545 4207 3.089284 TCTGTCTAGCTTGAACGATCCA 58.911 45.455 0.00 0.00 0.00 3.41
2546 4208 3.129638 AGTCTGTCTAGCTTGAACGATCC 59.870 47.826 0.00 0.00 0.00 3.36
2547 4209 4.101942 CAGTCTGTCTAGCTTGAACGATC 58.898 47.826 0.00 0.00 0.00 3.69
2548 4210 3.508012 ACAGTCTGTCTAGCTTGAACGAT 59.492 43.478 0.00 0.00 0.00 3.73
2549 4211 2.885266 ACAGTCTGTCTAGCTTGAACGA 59.115 45.455 0.00 0.00 0.00 3.85
2550 4212 3.290308 ACAGTCTGTCTAGCTTGAACG 57.710 47.619 0.00 0.00 0.00 3.95
2551 4213 5.293560 AGAAACAGTCTGTCTAGCTTGAAC 58.706 41.667 5.82 0.00 34.29 3.18
2552 4214 5.537300 AGAAACAGTCTGTCTAGCTTGAA 57.463 39.130 5.82 0.00 34.29 2.69
2564 4226 0.761187 TGCAGCTCCAGAAACAGTCT 59.239 50.000 0.00 0.00 36.88 3.24
2565 4227 1.155042 CTGCAGCTCCAGAAACAGTC 58.845 55.000 0.00 0.00 34.77 3.51
2566 4228 0.888285 GCTGCAGCTCCAGAAACAGT 60.888 55.000 31.33 0.00 38.21 3.55
2567 4229 0.887836 TGCTGCAGCTCCAGAAACAG 60.888 55.000 36.61 0.00 42.66 3.16
2568 4230 1.148949 TGCTGCAGCTCCAGAAACA 59.851 52.632 36.61 12.87 42.66 2.83
2569 4231 1.578423 GTGCTGCAGCTCCAGAAAC 59.422 57.895 36.61 21.93 42.66 2.78
2570 4232 4.069869 GTGCTGCAGCTCCAGAAA 57.930 55.556 36.61 14.44 42.66 2.52
2692 4354 2.031012 CGCAGTGTGGCTCTCCAA 59.969 61.111 0.00 0.00 45.53 3.53
3091 4759 2.103538 TGCGCGTATCCCGAGTTC 59.896 61.111 8.43 0.00 38.74 3.01
3092 4760 2.202703 GTGCGCGTATCCCGAGTT 60.203 61.111 8.43 0.00 38.74 3.01
3093 4761 2.292794 AATGTGCGCGTATCCCGAGT 62.293 55.000 8.43 0.00 38.74 4.18
3094 4762 1.591594 AATGTGCGCGTATCCCGAG 60.592 57.895 8.43 0.00 39.56 4.63
3095 4763 1.880796 CAATGTGCGCGTATCCCGA 60.881 57.895 8.43 0.00 39.56 5.14
3096 4764 2.625906 CAATGTGCGCGTATCCCG 59.374 61.111 8.43 0.00 40.40 5.14
3097 4765 2.327940 GCAATGTGCGCGTATCCC 59.672 61.111 8.43 0.00 31.71 3.85
3098 4766 2.327940 GGCAATGTGCGCGTATCC 59.672 61.111 8.43 0.00 46.21 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.