Multiple sequence alignment - TraesCS2D01G569000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G569000 chr2D 100.000 2732 0 0 1 2732 636923848 636921117 0.000000e+00 5046.0
1 TraesCS2D01G569000 chr2D 86.924 1086 79 24 691 1770 600580331 600579303 0.000000e+00 1160.0
2 TraesCS2D01G569000 chr2D 74.116 792 151 39 840 1592 638330154 638330930 7.450000e-71 278.0
3 TraesCS2D01G569000 chr2D 83.103 290 35 13 2382 2668 650050177 650049899 4.520000e-63 252.0
4 TraesCS2D01G569000 chr2D 81.639 305 38 13 2369 2668 542265915 542266206 1.260000e-58 237.0
5 TraesCS2D01G569000 chr2D 72.442 860 161 44 1215 2032 637345254 637344429 3.570000e-49 206.0
6 TraesCS2D01G569000 chr2D 81.132 212 38 1 677 886 636728455 636728244 4.680000e-38 169.0
7 TraesCS2D01G569000 chr7D 90.018 1122 111 1 592 1713 29984448 29985568 0.000000e+00 1450.0
8 TraesCS2D01G569000 chr7D 97.143 35 1 0 1936 1970 69449230 69449196 2.940000e-05 60.2
9 TraesCS2D01G569000 chr2A 91.485 1057 76 7 1029 2084 762725806 762726849 0.000000e+00 1441.0
10 TraesCS2D01G569000 chr2A 76.814 1199 204 35 585 1728 763862940 763861761 8.370000e-170 606.0
11 TraesCS2D01G569000 chr2A 89.183 416 40 5 622 1034 762724703 762725116 5.220000e-142 514.0
12 TraesCS2D01G569000 chr2A 73.373 1014 207 42 581 1558 762720257 762721243 4.390000e-83 318.0
13 TraesCS2D01G569000 chr2A 88.889 234 15 7 2081 2311 762881675 762881900 7.450000e-71 278.0
14 TraesCS2D01G569000 chr2A 79.276 304 52 6 1436 1737 763967744 763967450 4.610000e-48 202.0
15 TraesCS2D01G569000 chr2A 83.761 234 14 6 2081 2311 762727422 762727634 1.660000e-47 200.0
16 TraesCS2D01G569000 chr2A 90.789 152 8 4 1625 1770 761777367 761777216 5.970000e-47 198.0
17 TraesCS2D01G569000 chr2A 88.889 126 14 0 29 154 112491216 112491341 3.640000e-34 156.0
18 TraesCS2D01G569000 chr2A 92.308 91 7 0 582 672 763968666 763968576 2.210000e-26 130.0
19 TraesCS2D01G569000 chr7A 87.830 1249 106 24 543 1770 30271399 30272622 0.000000e+00 1423.0
20 TraesCS2D01G569000 chr7A 86.748 815 79 10 927 1735 30240864 30241655 0.000000e+00 880.0
21 TraesCS2D01G569000 chr7A 87.087 333 16 12 551 872 30240540 30240856 4.330000e-93 351.0
22 TraesCS2D01G569000 chr4A 88.779 1007 104 6 773 1770 699189121 699188115 0.000000e+00 1225.0
23 TraesCS2D01G569000 chr4A 90.761 184 12 3 592 775 699192664 699192486 9.780000e-60 241.0
24 TraesCS2D01G569000 chr2B 86.015 1094 80 28 691 1770 796164785 796165819 0.000000e+00 1105.0
25 TraesCS2D01G569000 chr2B 82.420 529 52 20 29 522 796432906 796433428 9.040000e-115 424.0
26 TraesCS2D01G569000 chr2B 79.429 350 48 11 582 911 797183093 797183438 2.740000e-55 226.0
27 TraesCS2D01G569000 chr2B 77.297 370 48 14 557 896 797208911 797209274 4.650000e-43 185.0
28 TraesCS2D01G569000 chr2B 77.027 370 49 14 557 896 797255306 797255669 2.160000e-41 180.0
29 TraesCS2D01G569000 chr3D 82.274 519 53 24 29 514 498095076 498095588 1.960000e-111 412.0
30 TraesCS2D01G569000 chr3D 81.989 372 42 17 2311 2669 376279712 376280071 2.660000e-75 292.0
31 TraesCS2D01G569000 chr3D 79.946 369 48 18 2312 2668 539453933 539454287 5.840000e-62 248.0
32 TraesCS2D01G569000 chr3D 100.000 31 0 0 1936 1966 572505566 572505536 1.060000e-04 58.4
33 TraesCS2D01G569000 chr5A 87.748 302 29 5 149 446 520528367 520528070 2.010000e-91 346.0
34 TraesCS2D01G569000 chr1B 82.521 349 40 16 2333 2668 502960250 502959910 1.240000e-73 287.0
35 TraesCS2D01G569000 chr4D 80.376 372 44 20 2311 2668 55037221 55037577 3.490000e-64 255.0
36 TraesCS2D01G569000 chr4D 79.301 372 48 19 2311 2668 55042516 55042872 1.640000e-57 233.0
37 TraesCS2D01G569000 chr1A 87.556 225 23 5 2444 2668 14788222 14788003 3.490000e-64 255.0
38 TraesCS2D01G569000 chr3A 81.518 303 42 13 2369 2668 11387497 11387788 1.260000e-58 237.0
39 TraesCS2D01G569000 chr4B 89.785 186 14 3 332 513 27271417 27271233 1.640000e-57 233.0
40 TraesCS2D01G569000 chr6A 86.905 84 6 4 332 410 531714657 531714574 3.750000e-14 89.8
41 TraesCS2D01G569000 chr1D 94.737 38 2 0 1930 1967 414711627 414711664 2.940000e-05 60.2
42 TraesCS2D01G569000 chr1D 97.143 35 1 0 1936 1970 428616975 428616941 2.940000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G569000 chr2D 636921117 636923848 2731 True 5046.00 5046 100.0000 1 2732 1 chr2D.!!$R3 2731
1 TraesCS2D01G569000 chr2D 600579303 600580331 1028 True 1160.00 1160 86.9240 691 1770 1 chr2D.!!$R1 1079
2 TraesCS2D01G569000 chr2D 638330154 638330930 776 False 278.00 278 74.1160 840 1592 1 chr2D.!!$F2 752
3 TraesCS2D01G569000 chr2D 637344429 637345254 825 True 206.00 206 72.4420 1215 2032 1 chr2D.!!$R4 817
4 TraesCS2D01G569000 chr7D 29984448 29985568 1120 False 1450.00 1450 90.0180 592 1713 1 chr7D.!!$F1 1121
5 TraesCS2D01G569000 chr2A 762720257 762727634 7377 False 618.25 1441 84.4505 581 2311 4 chr2A.!!$F3 1730
6 TraesCS2D01G569000 chr2A 763861761 763862940 1179 True 606.00 606 76.8140 585 1728 1 chr2A.!!$R2 1143
7 TraesCS2D01G569000 chr7A 30271399 30272622 1223 False 1423.00 1423 87.8300 543 1770 1 chr7A.!!$F1 1227
8 TraesCS2D01G569000 chr7A 30240540 30241655 1115 False 615.50 880 86.9175 551 1735 2 chr7A.!!$F2 1184
9 TraesCS2D01G569000 chr4A 699188115 699192664 4549 True 733.00 1225 89.7700 592 1770 2 chr4A.!!$R1 1178
10 TraesCS2D01G569000 chr2B 796164785 796165819 1034 False 1105.00 1105 86.0150 691 1770 1 chr2B.!!$F1 1079
11 TraesCS2D01G569000 chr2B 796432906 796433428 522 False 424.00 424 82.4200 29 522 1 chr2B.!!$F2 493
12 TraesCS2D01G569000 chr3D 498095076 498095588 512 False 412.00 412 82.2740 29 514 1 chr3D.!!$F2 485

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
564 599 0.105555 TCCATCCCCAATCCAATGCC 60.106 55.0 0.0 0.0 0.0 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2412 11633 0.037232 TTCGTCCACACACACACACA 60.037 50.0 0.0 0.0 0.0 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.608948 AAAGAGTGTTCCTCCACTAGTG 57.391 45.455 16.34 16.34 45.46 2.74
22 23 3.527507 AGAGTGTTCCTCCACTAGTGA 57.472 47.619 24.68 9.38 45.46 3.41
23 24 4.054359 AGAGTGTTCCTCCACTAGTGAT 57.946 45.455 24.68 0.00 45.46 3.06
24 25 4.421131 AGAGTGTTCCTCCACTAGTGATT 58.579 43.478 24.68 0.00 45.46 2.57
25 26 4.841246 AGAGTGTTCCTCCACTAGTGATTT 59.159 41.667 24.68 0.00 45.46 2.17
26 27 5.046950 AGAGTGTTCCTCCACTAGTGATTTC 60.047 44.000 24.68 9.53 45.46 2.17
27 28 3.927142 GTGTTCCTCCACTAGTGATTTCG 59.073 47.826 24.68 7.09 32.50 3.46
39 40 7.061210 CCACTAGTGATTTCGCTAAATATCTCG 59.939 40.741 24.68 0.00 38.35 4.04
60 61 1.696097 AACAAGGACGCTCACTGGGT 61.696 55.000 0.00 0.00 44.89 4.51
92 93 1.157585 TAGTGCCGCGCATTTTGTAA 58.842 45.000 8.75 0.00 41.91 2.41
94 95 1.443533 TGCCGCGCATTTTGTAAGC 60.444 52.632 8.75 0.00 31.71 3.09
225 255 7.644490 ACGAACATTTTTGTAAACTCATAGCA 58.356 30.769 0.00 0.00 0.00 3.49
301 331 7.747888 TGACCATCAACTCGTGTATAATTTTG 58.252 34.615 0.00 0.00 0.00 2.44
310 340 8.547967 ACTCGTGTATAATTTTGACTTGTGAT 57.452 30.769 0.00 0.00 0.00 3.06
427 460 9.628746 ACAAACATTATTTTAAACGTCATACCC 57.371 29.630 0.00 0.00 0.00 3.69
435 468 6.730960 TTTAAACGTCATACCCATGAGTTC 57.269 37.500 0.00 0.00 41.87 3.01
529 564 8.854614 AGAAATATTTCCATTATTCTCTCCGG 57.145 34.615 21.86 0.00 37.92 5.14
530 565 8.440771 AGAAATATTTCCATTATTCTCTCCGGT 58.559 33.333 21.86 0.00 37.92 5.28
531 566 8.622948 AAATATTTCCATTATTCTCTCCGGTC 57.377 34.615 0.00 0.00 0.00 4.79
532 567 4.417426 TTTCCATTATTCTCTCCGGTCC 57.583 45.455 0.00 0.00 0.00 4.46
533 568 2.326428 TCCATTATTCTCTCCGGTCCC 58.674 52.381 0.00 0.00 0.00 4.46
534 569 1.348036 CCATTATTCTCTCCGGTCCCC 59.652 57.143 0.00 0.00 0.00 4.81
535 570 2.047061 CATTATTCTCTCCGGTCCCCA 58.953 52.381 0.00 0.00 0.00 4.96
536 571 2.257391 TTATTCTCTCCGGTCCCCAA 57.743 50.000 0.00 0.00 0.00 4.12
537 572 1.492764 TATTCTCTCCGGTCCCCAAC 58.507 55.000 0.00 0.00 0.00 3.77
538 573 0.252742 ATTCTCTCCGGTCCCCAACT 60.253 55.000 0.00 0.00 0.00 3.16
539 574 1.192146 TTCTCTCCGGTCCCCAACTG 61.192 60.000 0.00 0.00 0.00 3.16
540 575 3.316573 CTCTCCGGTCCCCAACTGC 62.317 68.421 0.00 0.00 32.41 4.40
541 576 3.322466 CTCCGGTCCCCAACTGCT 61.322 66.667 0.00 0.00 32.41 4.24
542 577 3.316573 CTCCGGTCCCCAACTGCTC 62.317 68.421 0.00 0.00 32.41 4.26
543 578 4.410400 CCGGTCCCCAACTGCTCC 62.410 72.222 0.00 0.00 32.41 4.70
544 579 3.636231 CGGTCCCCAACTGCTCCA 61.636 66.667 0.00 0.00 0.00 3.86
545 580 2.971598 CGGTCCCCAACTGCTCCAT 61.972 63.158 0.00 0.00 0.00 3.41
546 581 1.077429 GGTCCCCAACTGCTCCATC 60.077 63.158 0.00 0.00 0.00 3.51
547 582 1.077429 GTCCCCAACTGCTCCATCC 60.077 63.158 0.00 0.00 0.00 3.51
564 599 0.105555 TCCATCCCCAATCCAATGCC 60.106 55.000 0.00 0.00 0.00 4.40
565 600 1.466025 CCATCCCCAATCCAATGCCG 61.466 60.000 0.00 0.00 0.00 5.69
568 603 2.828095 CCCAATCCAATGCCGCGA 60.828 61.111 8.23 0.00 0.00 5.87
569 604 2.717485 CCAATCCAATGCCGCGAG 59.283 61.111 8.23 0.00 0.00 5.03
790 8620 2.766651 GGGCCCGACCACCTCATA 60.767 66.667 5.69 0.00 42.05 2.15
791 8621 2.504519 GGCCCGACCACCTCATAC 59.495 66.667 0.00 0.00 38.86 2.39
793 8623 1.623542 GGCCCGACCACCTCATACTT 61.624 60.000 0.00 0.00 38.86 2.24
794 8624 0.462047 GCCCGACCACCTCATACTTG 60.462 60.000 0.00 0.00 0.00 3.16
795 8625 0.178068 CCCGACCACCTCATACTTGG 59.822 60.000 0.00 0.00 36.39 3.61
796 8626 0.462047 CCGACCACCTCATACTTGGC 60.462 60.000 0.00 0.00 33.25 4.52
797 8627 0.537188 CGACCACCTCATACTTGGCT 59.463 55.000 0.00 0.00 33.25 4.75
798 8628 1.471676 CGACCACCTCATACTTGGCTC 60.472 57.143 0.00 0.00 33.25 4.70
799 8629 1.834263 GACCACCTCATACTTGGCTCT 59.166 52.381 0.00 0.00 33.25 4.09
800 8630 2.237392 GACCACCTCATACTTGGCTCTT 59.763 50.000 0.00 0.00 33.25 2.85
801 8631 2.237392 ACCACCTCATACTTGGCTCTTC 59.763 50.000 0.00 0.00 33.25 2.87
802 8632 2.544685 CACCTCATACTTGGCTCTTCG 58.455 52.381 0.00 0.00 0.00 3.79
809 8639 0.543174 ACTTGGCTCTTCGTCCTCCT 60.543 55.000 0.00 0.00 0.00 3.69
904 8734 2.505982 CCGGCCATCGAGACCATT 59.494 61.111 2.24 0.00 42.43 3.16
911 8741 0.178767 CATCGAGACCATTCCCTGCA 59.821 55.000 0.00 0.00 0.00 4.41
919 8749 1.522355 CATTCCCTGCATCGACGCT 60.522 57.895 4.63 0.00 0.00 5.07
920 8750 1.522355 ATTCCCTGCATCGACGCTG 60.522 57.895 4.63 3.83 0.00 5.18
942 8779 2.119611 TGGGGCTCCGTCTTCTCA 59.880 61.111 0.00 0.00 35.24 3.27
1302 9850 3.077519 GCAGGACGCCGATGGTACT 62.078 63.158 0.00 0.00 32.94 2.73
1355 9931 4.947147 GCCCTGGTGCGACCACAA 62.947 66.667 4.16 0.00 44.79 3.33
1551 10153 2.649034 GTGTCGACGAGGGAGCAA 59.351 61.111 11.62 0.00 0.00 3.91
1771 10392 2.298610 GATAGCTTGGGTGGGTTAAGC 58.701 52.381 0.00 0.00 45.33 3.09
1860 10489 5.993748 AAAGGTTTCAGAACACAGGAAAA 57.006 34.783 0.00 0.00 37.51 2.29
1893 10522 1.882623 AGCTTCTTCTTTTCGCCCTTG 59.117 47.619 0.00 0.00 0.00 3.61
1934 10576 1.263356 GTGGCCCCTTTAGGTTTTCC 58.737 55.000 0.00 0.00 41.05 3.13
1964 10606 2.639839 AGTCTAATCAGTGTTGCAGGGT 59.360 45.455 0.00 0.00 0.00 4.34
1967 10609 2.664402 AATCAGTGTTGCAGGGTTCT 57.336 45.000 0.00 0.00 0.00 3.01
1970 10612 1.211703 TCAGTGTTGCAGGGTTCTGAA 59.788 47.619 0.00 0.00 43.49 3.02
1999 10641 1.985473 TGCTATGATGATTGCCACCC 58.015 50.000 0.00 0.00 30.07 4.61
2014 10656 7.717875 TGATTGCCACCCATATTAGTAAGTAAC 59.282 37.037 0.00 0.00 0.00 2.50
2040 10682 2.229784 GCCTTGTGAGGTTTCTGGATTG 59.770 50.000 0.00 0.00 45.44 2.67
2052 10694 6.043938 AGGTTTCTGGATTGACTAACAGGTTA 59.956 38.462 0.00 0.00 0.00 2.85
2074 10716 9.063615 GGTTAAATTCAGAACTAAACAGAGGAA 57.936 33.333 0.00 0.00 0.00 3.36
2098 11316 9.529325 GAAAACAGTAATAATTTTATGCCTCCC 57.471 33.333 0.00 0.00 0.00 4.30
2122 11340 6.405508 CCCTGATCATTTCAATCTGAAGTTGG 60.406 42.308 0.00 0.00 37.70 3.77
2130 11348 0.779997 ATCTGAAGTTGGGTGGGCTT 59.220 50.000 0.00 0.00 0.00 4.35
2156 11374 2.755952 TAGGTCAGATGGCTGCTAGA 57.244 50.000 0.00 0.00 42.01 2.43
2157 11375 1.871418 AGGTCAGATGGCTGCTAGAA 58.129 50.000 0.00 0.00 42.01 2.10
2158 11376 2.191400 AGGTCAGATGGCTGCTAGAAA 58.809 47.619 0.00 0.00 42.01 2.52
2159 11377 2.170187 AGGTCAGATGGCTGCTAGAAAG 59.830 50.000 0.00 0.00 42.01 2.62
2160 11378 2.169352 GGTCAGATGGCTGCTAGAAAGA 59.831 50.000 0.00 0.00 42.01 2.52
2161 11379 3.369892 GGTCAGATGGCTGCTAGAAAGAA 60.370 47.826 0.00 0.00 42.01 2.52
2162 11380 4.256920 GTCAGATGGCTGCTAGAAAGAAA 58.743 43.478 0.00 0.00 42.01 2.52
2163 11381 4.332268 GTCAGATGGCTGCTAGAAAGAAAG 59.668 45.833 0.00 0.00 42.01 2.62
2164 11382 3.065095 CAGATGGCTGCTAGAAAGAAAGC 59.935 47.826 0.00 0.00 39.25 3.51
2165 11383 2.867109 TGGCTGCTAGAAAGAAAGCT 57.133 45.000 0.00 0.00 39.53 3.74
2166 11384 2.430465 TGGCTGCTAGAAAGAAAGCTG 58.570 47.619 0.00 0.00 39.53 4.24
2169 11387 3.743567 CTGCTAGAAAGAAAGCTGCTG 57.256 47.619 1.35 0.00 39.53 4.41
2170 11388 1.808945 TGCTAGAAAGAAAGCTGCTGC 59.191 47.619 1.35 7.62 39.53 5.25
2171 11389 1.132073 GCTAGAAAGAAAGCTGCTGCC 59.868 52.381 12.44 0.00 40.80 4.85
2172 11390 2.709213 CTAGAAAGAAAGCTGCTGCCT 58.291 47.619 12.44 0.00 40.80 4.75
2173 11391 1.245732 AGAAAGAAAGCTGCTGCCTG 58.754 50.000 12.44 0.00 40.80 4.85
2174 11392 0.388263 GAAAGAAAGCTGCTGCCTGC 60.388 55.000 12.44 0.00 40.80 4.85
2175 11393 1.813728 AAAGAAAGCTGCTGCCTGCC 61.814 55.000 12.44 0.00 42.00 4.85
2176 11394 3.756727 GAAAGCTGCTGCCTGCCC 61.757 66.667 12.44 0.00 42.00 5.36
2192 11410 0.320421 GCCCGTTGAGAGCTGTTGTA 60.320 55.000 0.00 0.00 0.00 2.41
2221 11439 0.672889 TGAGAGCCAGATGATCGAGC 59.327 55.000 0.00 0.00 0.00 5.03
2237 11455 7.055667 TGATCGAGCTGAATTAGGATTAGTT 57.944 36.000 0.90 0.00 0.00 2.24
2238 11456 8.178313 TGATCGAGCTGAATTAGGATTAGTTA 57.822 34.615 0.90 0.00 0.00 2.24
2256 11477 8.630054 ATTAGTTAGCACAACAATTAGGAACA 57.370 30.769 4.30 0.00 0.00 3.18
2262 11483 7.524717 AGCACAACAATTAGGAACACTAAAT 57.475 32.000 0.00 0.00 44.39 1.40
2311 11532 4.025040 TGAGCATCTCCAAGACATGTTT 57.975 40.909 0.00 0.00 34.92 2.83
2312 11533 3.754850 TGAGCATCTCCAAGACATGTTTG 59.245 43.478 0.00 6.78 34.92 2.93
2313 11534 4.005650 GAGCATCTCCAAGACATGTTTGA 58.994 43.478 17.13 5.31 0.00 2.69
2314 11535 4.597004 AGCATCTCCAAGACATGTTTGAT 58.403 39.130 17.13 2.77 0.00 2.57
2315 11536 5.748402 AGCATCTCCAAGACATGTTTGATA 58.252 37.500 17.13 8.09 0.00 2.15
2316 11537 5.821470 AGCATCTCCAAGACATGTTTGATAG 59.179 40.000 17.13 14.22 0.00 2.08
2317 11538 5.819379 GCATCTCCAAGACATGTTTGATAGA 59.181 40.000 17.13 17.27 0.00 1.98
2318 11539 6.018098 GCATCTCCAAGACATGTTTGATAGAG 60.018 42.308 17.13 14.91 0.00 2.43
2319 11540 6.857437 TCTCCAAGACATGTTTGATAGAGA 57.143 37.500 17.13 16.23 0.00 3.10
2320 11541 6.634805 TCTCCAAGACATGTTTGATAGAGAC 58.365 40.000 17.13 0.00 0.00 3.36
2321 11542 6.438741 TCTCCAAGACATGTTTGATAGAGACT 59.561 38.462 17.13 0.00 0.00 3.24
2322 11543 7.009179 TCCAAGACATGTTTGATAGAGACTT 57.991 36.000 17.13 3.61 0.00 3.01
2323 11544 7.453393 TCCAAGACATGTTTGATAGAGACTTT 58.547 34.615 17.13 0.00 0.00 2.66
2324 11545 8.593679 TCCAAGACATGTTTGATAGAGACTTTA 58.406 33.333 17.13 0.00 0.00 1.85
2325 11546 8.877779 CCAAGACATGTTTGATAGAGACTTTAG 58.122 37.037 17.13 0.00 0.00 1.85
2326 11547 9.645059 CAAGACATGTTTGATAGAGACTTTAGA 57.355 33.333 0.00 0.00 0.00 2.10
2329 11550 8.864069 ACATGTTTGATAGAGACTTTAGATCG 57.136 34.615 0.00 0.00 0.00 3.69
2330 11551 7.923344 ACATGTTTGATAGAGACTTTAGATCGG 59.077 37.037 0.00 0.00 0.00 4.18
2331 11552 6.806751 TGTTTGATAGAGACTTTAGATCGGG 58.193 40.000 0.00 0.00 0.00 5.14
2332 11553 6.380274 TGTTTGATAGAGACTTTAGATCGGGT 59.620 38.462 0.00 0.00 0.00 5.28
2333 11554 7.558807 TGTTTGATAGAGACTTTAGATCGGGTA 59.441 37.037 0.00 0.00 0.00 3.69
2334 11555 7.747155 TTGATAGAGACTTTAGATCGGGTAG 57.253 40.000 0.00 0.00 0.00 3.18
2335 11556 6.239396 TGATAGAGACTTTAGATCGGGTAGG 58.761 44.000 0.00 0.00 0.00 3.18
2336 11557 3.224269 AGAGACTTTAGATCGGGTAGGC 58.776 50.000 0.00 0.00 0.00 3.93
2337 11558 3.117436 AGAGACTTTAGATCGGGTAGGCT 60.117 47.826 0.00 0.00 0.00 4.58
2338 11559 4.104420 AGAGACTTTAGATCGGGTAGGCTA 59.896 45.833 0.00 0.00 0.00 3.93
2339 11560 4.400120 AGACTTTAGATCGGGTAGGCTAG 58.600 47.826 0.00 0.00 0.00 3.42
2340 11561 4.104420 AGACTTTAGATCGGGTAGGCTAGA 59.896 45.833 0.00 0.00 0.00 2.43
2341 11562 5.000570 ACTTTAGATCGGGTAGGCTAGAT 57.999 43.478 0.00 0.00 0.00 1.98
2342 11563 5.395611 ACTTTAGATCGGGTAGGCTAGATT 58.604 41.667 0.00 0.00 0.00 2.40
2343 11564 6.550163 ACTTTAGATCGGGTAGGCTAGATTA 58.450 40.000 0.00 0.00 0.00 1.75
2344 11565 6.433716 ACTTTAGATCGGGTAGGCTAGATTAC 59.566 42.308 0.00 0.00 0.00 1.89
2345 11566 4.383931 AGATCGGGTAGGCTAGATTACA 57.616 45.455 0.00 0.00 0.00 2.41
2346 11567 4.936802 AGATCGGGTAGGCTAGATTACAT 58.063 43.478 0.00 0.00 0.00 2.29
2347 11568 4.951094 AGATCGGGTAGGCTAGATTACATC 59.049 45.833 0.00 0.00 0.00 3.06
2348 11569 3.079578 TCGGGTAGGCTAGATTACATCG 58.920 50.000 0.00 3.82 0.00 3.84
2349 11570 2.163815 CGGGTAGGCTAGATTACATCGG 59.836 54.545 0.00 0.00 0.00 4.18
2350 11571 3.163467 GGGTAGGCTAGATTACATCGGT 58.837 50.000 0.00 0.00 0.00 4.69
2351 11572 4.338879 GGGTAGGCTAGATTACATCGGTA 58.661 47.826 0.00 0.00 0.00 4.02
2352 11573 4.398673 GGGTAGGCTAGATTACATCGGTAG 59.601 50.000 0.00 0.00 0.00 3.18
2353 11574 5.008980 GGTAGGCTAGATTACATCGGTAGT 58.991 45.833 0.00 0.00 0.00 2.73
2354 11575 5.476254 GGTAGGCTAGATTACATCGGTAGTT 59.524 44.000 0.00 0.00 0.00 2.24
2355 11576 5.708877 AGGCTAGATTACATCGGTAGTTC 57.291 43.478 0.00 0.00 0.00 3.01
2356 11577 5.138276 AGGCTAGATTACATCGGTAGTTCA 58.862 41.667 0.00 0.00 0.00 3.18
2357 11578 5.009811 AGGCTAGATTACATCGGTAGTTCAC 59.990 44.000 0.00 0.00 0.00 3.18
2358 11579 5.221130 GCTAGATTACATCGGTAGTTCACC 58.779 45.833 0.00 0.00 44.75 4.02
2359 11580 5.009811 GCTAGATTACATCGGTAGTTCACCT 59.990 44.000 0.00 0.00 46.19 4.00
2360 11581 5.934402 AGATTACATCGGTAGTTCACCTT 57.066 39.130 0.00 0.00 46.19 3.50
2361 11582 5.903810 AGATTACATCGGTAGTTCACCTTC 58.096 41.667 0.00 0.00 46.19 3.46
2362 11583 5.657302 AGATTACATCGGTAGTTCACCTTCT 59.343 40.000 0.00 0.00 46.19 2.85
2363 11584 3.594603 ACATCGGTAGTTCACCTTCTG 57.405 47.619 0.00 0.00 46.19 3.02
2364 11585 2.271800 CATCGGTAGTTCACCTTCTGC 58.728 52.381 0.00 0.00 46.19 4.26
2365 11586 1.629043 TCGGTAGTTCACCTTCTGCT 58.371 50.000 0.00 0.00 46.19 4.24
2366 11587 1.968493 TCGGTAGTTCACCTTCTGCTT 59.032 47.619 0.00 0.00 46.19 3.91
2367 11588 2.069273 CGGTAGTTCACCTTCTGCTTG 58.931 52.381 0.00 0.00 46.19 4.01
2368 11589 2.288825 CGGTAGTTCACCTTCTGCTTGA 60.289 50.000 0.00 0.00 46.19 3.02
2369 11590 3.067833 GGTAGTTCACCTTCTGCTTGAC 58.932 50.000 0.00 0.00 44.79 3.18
2370 11591 3.244249 GGTAGTTCACCTTCTGCTTGACT 60.244 47.826 0.00 0.00 44.79 3.41
2371 11592 3.567478 AGTTCACCTTCTGCTTGACTT 57.433 42.857 0.00 0.00 0.00 3.01
2372 11593 3.209410 AGTTCACCTTCTGCTTGACTTG 58.791 45.455 0.00 0.00 0.00 3.16
2373 11594 3.118261 AGTTCACCTTCTGCTTGACTTGA 60.118 43.478 0.00 0.00 0.00 3.02
2374 11595 3.117491 TCACCTTCTGCTTGACTTGAG 57.883 47.619 0.00 0.00 0.00 3.02
2375 11596 1.534595 CACCTTCTGCTTGACTTGAGC 59.465 52.381 0.00 0.00 40.53 4.26
2376 11597 1.163554 CCTTCTGCTTGACTTGAGCC 58.836 55.000 0.00 0.00 39.38 4.70
2377 11598 0.795085 CTTCTGCTTGACTTGAGCCG 59.205 55.000 0.00 0.00 39.38 5.52
2378 11599 0.603707 TTCTGCTTGACTTGAGCCGG 60.604 55.000 0.00 0.00 39.38 6.13
2379 11600 1.004560 CTGCTTGACTTGAGCCGGA 60.005 57.895 5.05 0.00 39.38 5.14
2380 11601 1.004560 TGCTTGACTTGAGCCGGAG 60.005 57.895 5.05 0.00 39.38 4.63
2392 11613 4.181010 CCGGAGGCCATGGTGGAG 62.181 72.222 14.67 1.57 46.14 3.86
2393 11614 4.181010 CGGAGGCCATGGTGGAGG 62.181 72.222 14.67 0.00 40.96 4.30
2394 11615 3.813724 GGAGGCCATGGTGGAGGG 61.814 72.222 14.67 0.00 40.96 4.30
2395 11616 3.813724 GAGGCCATGGTGGAGGGG 61.814 72.222 14.67 0.00 40.96 4.79
2396 11617 4.701437 AGGCCATGGTGGAGGGGT 62.701 66.667 14.67 0.00 40.96 4.95
2397 11618 4.447342 GGCCATGGTGGAGGGGTG 62.447 72.222 14.67 0.00 40.96 4.61
2398 11619 4.447342 GCCATGGTGGAGGGGTGG 62.447 72.222 14.67 0.00 40.96 4.61
2399 11620 2.941025 CCATGGTGGAGGGGTGGT 60.941 66.667 2.57 0.00 40.96 4.16
2400 11621 2.677228 CATGGTGGAGGGGTGGTC 59.323 66.667 0.00 0.00 0.00 4.02
2401 11622 3.009115 ATGGTGGAGGGGTGGTCG 61.009 66.667 0.00 0.00 0.00 4.79
2404 11625 4.016706 GTGGAGGGGTGGTCGGTG 62.017 72.222 0.00 0.00 0.00 4.94
2405 11626 4.242586 TGGAGGGGTGGTCGGTGA 62.243 66.667 0.00 0.00 0.00 4.02
2406 11627 2.687566 GGAGGGGTGGTCGGTGAT 60.688 66.667 0.00 0.00 0.00 3.06
2407 11628 2.584608 GAGGGGTGGTCGGTGATG 59.415 66.667 0.00 0.00 0.00 3.07
2408 11629 3.009115 AGGGGTGGTCGGTGATGG 61.009 66.667 0.00 0.00 0.00 3.51
2409 11630 4.796495 GGGGTGGTCGGTGATGGC 62.796 72.222 0.00 0.00 0.00 4.40
2412 11633 4.760047 GTGGTCGGTGATGGCGCT 62.760 66.667 7.64 0.00 0.00 5.92
2413 11634 4.758251 TGGTCGGTGATGGCGCTG 62.758 66.667 7.64 0.00 0.00 5.18
2414 11635 4.760047 GGTCGGTGATGGCGCTGT 62.760 66.667 7.64 0.00 32.68 4.40
2415 11636 3.490759 GTCGGTGATGGCGCTGTG 61.491 66.667 7.64 0.00 32.68 3.66
2416 11637 4.002506 TCGGTGATGGCGCTGTGT 62.003 61.111 7.64 0.00 32.68 3.72
2417 11638 3.792047 CGGTGATGGCGCTGTGTG 61.792 66.667 7.64 0.00 0.00 3.82
2418 11639 2.669569 GGTGATGGCGCTGTGTGT 60.670 61.111 7.64 0.00 0.00 3.72
2419 11640 2.557805 GTGATGGCGCTGTGTGTG 59.442 61.111 7.64 0.00 0.00 3.82
2420 11641 2.110835 TGATGGCGCTGTGTGTGT 59.889 55.556 7.64 0.00 0.00 3.72
2421 11642 2.253051 TGATGGCGCTGTGTGTGTG 61.253 57.895 7.64 0.00 0.00 3.82
2422 11643 2.203195 ATGGCGCTGTGTGTGTGT 60.203 55.556 7.64 0.00 0.00 3.72
2423 11644 2.448153 GATGGCGCTGTGTGTGTGTG 62.448 60.000 7.64 0.00 0.00 3.82
2424 11645 3.202001 GGCGCTGTGTGTGTGTGT 61.202 61.111 7.64 0.00 0.00 3.72
2425 11646 2.023181 GCGCTGTGTGTGTGTGTG 59.977 61.111 0.00 0.00 0.00 3.82
2426 11647 2.708865 CGCTGTGTGTGTGTGTGG 59.291 61.111 0.00 0.00 0.00 4.17
2427 11648 1.813337 CGCTGTGTGTGTGTGTGGA 60.813 57.895 0.00 0.00 0.00 4.02
2428 11649 1.721487 GCTGTGTGTGTGTGTGGAC 59.279 57.895 0.00 0.00 0.00 4.02
2429 11650 2.005995 CTGTGTGTGTGTGTGGACG 58.994 57.895 0.00 0.00 0.00 4.79
2430 11651 0.459411 CTGTGTGTGTGTGTGGACGA 60.459 55.000 0.00 0.00 0.00 4.20
2431 11652 0.037232 TGTGTGTGTGTGTGGACGAA 60.037 50.000 0.00 0.00 0.00 3.85
2432 11653 0.650512 GTGTGTGTGTGTGGACGAAG 59.349 55.000 0.00 0.00 0.00 3.79
2445 11666 4.988598 CGAAGTGGTGGCGGTGCT 62.989 66.667 0.00 0.00 0.00 4.40
2446 11667 2.594592 GAAGTGGTGGCGGTGCTT 60.595 61.111 0.00 0.00 0.00 3.91
2447 11668 2.594592 AAGTGGTGGCGGTGCTTC 60.595 61.111 0.00 0.00 0.00 3.86
2448 11669 4.643387 AGTGGTGGCGGTGCTTCC 62.643 66.667 0.00 0.00 0.00 3.46
2451 11672 4.660938 GGTGGCGGTGCTTCCCTT 62.661 66.667 0.00 0.00 0.00 3.95
2452 11673 3.056328 GTGGCGGTGCTTCCCTTC 61.056 66.667 0.00 0.00 0.00 3.46
2453 11674 4.697756 TGGCGGTGCTTCCCTTCG 62.698 66.667 0.00 0.00 0.00 3.79
2456 11677 2.358737 CGGTGCTTCCCTTCGCTT 60.359 61.111 0.00 0.00 0.00 4.68
2457 11678 2.391389 CGGTGCTTCCCTTCGCTTC 61.391 63.158 0.00 0.00 0.00 3.86
2458 11679 1.003233 GGTGCTTCCCTTCGCTTCT 60.003 57.895 0.00 0.00 0.00 2.85
2459 11680 1.301677 GGTGCTTCCCTTCGCTTCTG 61.302 60.000 0.00 0.00 0.00 3.02
2460 11681 1.672356 TGCTTCCCTTCGCTTCTGC 60.672 57.895 0.00 0.00 0.00 4.26
2471 11692 2.979130 GCTTCTGCGCTAACCCTAG 58.021 57.895 9.73 0.00 0.00 3.02
2472 11693 0.460311 GCTTCTGCGCTAACCCTAGA 59.540 55.000 9.73 0.00 0.00 2.43
2473 11694 1.069358 GCTTCTGCGCTAACCCTAGAT 59.931 52.381 9.73 0.00 0.00 1.98
2474 11695 2.864489 GCTTCTGCGCTAACCCTAGATC 60.864 54.545 9.73 0.00 0.00 2.75
2475 11696 0.952280 TCTGCGCTAACCCTAGATCG 59.048 55.000 9.73 0.00 0.00 3.69
2476 11697 0.039074 CTGCGCTAACCCTAGATCGG 60.039 60.000 9.73 0.00 0.00 4.18
2477 11698 0.466739 TGCGCTAACCCTAGATCGGA 60.467 55.000 9.73 0.00 0.00 4.55
2478 11699 0.672342 GCGCTAACCCTAGATCGGAA 59.328 55.000 0.00 0.00 0.00 4.30
2479 11700 1.602416 GCGCTAACCCTAGATCGGAAC 60.602 57.143 0.00 0.00 0.00 3.62
2493 11714 1.525442 GGAACGGATGTAGGTGGGG 59.475 63.158 0.00 0.00 0.00 4.96
2494 11715 1.525442 GAACGGATGTAGGTGGGGG 59.475 63.158 0.00 0.00 0.00 5.40
2517 11738 4.025401 GGCGCACGGTGAACCTTG 62.025 66.667 13.29 1.71 38.21 3.61
2518 11739 3.276846 GCGCACGGTGAACCTTGT 61.277 61.111 13.29 0.00 37.56 3.16
2519 11740 1.957186 GCGCACGGTGAACCTTGTA 60.957 57.895 13.29 0.00 37.56 2.41
2520 11741 1.296056 GCGCACGGTGAACCTTGTAT 61.296 55.000 13.29 0.00 37.56 2.29
2521 11742 0.719465 CGCACGGTGAACCTTGTATC 59.281 55.000 13.29 0.00 37.56 2.24
2522 11743 0.719465 GCACGGTGAACCTTGTATCG 59.281 55.000 13.29 0.00 37.56 2.92
2523 11744 1.938016 GCACGGTGAACCTTGTATCGT 60.938 52.381 13.29 0.00 37.56 3.73
2524 11745 1.724623 CACGGTGAACCTTGTATCGTG 59.275 52.381 0.74 0.00 39.97 4.35
2525 11746 1.342174 ACGGTGAACCTTGTATCGTGT 59.658 47.619 0.00 0.00 0.00 4.49
2526 11747 1.724623 CGGTGAACCTTGTATCGTGTG 59.275 52.381 0.00 0.00 0.00 3.82
2527 11748 1.463444 GGTGAACCTTGTATCGTGTGC 59.537 52.381 0.00 0.00 0.00 4.57
2528 11749 1.126113 GTGAACCTTGTATCGTGTGCG 59.874 52.381 0.00 0.00 39.92 5.34
2529 11750 0.719465 GAACCTTGTATCGTGTGCGG 59.281 55.000 0.00 0.00 38.89 5.69
2530 11751 1.296056 AACCTTGTATCGTGTGCGGC 61.296 55.000 0.00 0.00 38.89 6.53
2531 11752 2.461110 CCTTGTATCGTGTGCGGCC 61.461 63.158 0.00 0.00 38.89 6.13
2532 11753 2.798501 CTTGTATCGTGTGCGGCCG 61.799 63.158 24.05 24.05 38.89 6.13
2533 11754 4.805231 TGTATCGTGTGCGGCCGG 62.805 66.667 29.38 10.00 38.89 6.13
2548 11769 3.330720 CGGCTCCCCCACCTCTTT 61.331 66.667 0.00 0.00 0.00 2.52
2549 11770 1.993391 CGGCTCCCCCACCTCTTTA 60.993 63.158 0.00 0.00 0.00 1.85
2550 11771 1.345715 CGGCTCCCCCACCTCTTTAT 61.346 60.000 0.00 0.00 0.00 1.40
2551 11772 1.815757 GGCTCCCCCACCTCTTTATA 58.184 55.000 0.00 0.00 0.00 0.98
2552 11773 2.349445 GGCTCCCCCACCTCTTTATAT 58.651 52.381 0.00 0.00 0.00 0.86
2553 11774 3.527937 GGCTCCCCCACCTCTTTATATA 58.472 50.000 0.00 0.00 0.00 0.86
2554 11775 4.112331 GGCTCCCCCACCTCTTTATATAT 58.888 47.826 0.00 0.00 0.00 0.86
2555 11776 5.286221 GGCTCCCCCACCTCTTTATATATA 58.714 45.833 0.00 0.00 0.00 0.86
2556 11777 5.367060 GGCTCCCCCACCTCTTTATATATAG 59.633 48.000 0.00 0.00 0.00 1.31
2557 11778 5.163290 GCTCCCCCACCTCTTTATATATAGC 60.163 48.000 0.00 0.00 0.00 2.97
2558 11779 5.922715 TCCCCCACCTCTTTATATATAGCA 58.077 41.667 0.00 0.00 0.00 3.49
2559 11780 5.724854 TCCCCCACCTCTTTATATATAGCAC 59.275 44.000 0.00 0.00 0.00 4.40
2560 11781 5.395324 CCCCCACCTCTTTATATATAGCACG 60.395 48.000 0.00 0.00 0.00 5.34
2561 11782 5.395324 CCCCACCTCTTTATATATAGCACGG 60.395 48.000 0.00 0.00 0.00 4.94
2562 11783 5.109903 CCACCTCTTTATATATAGCACGGC 58.890 45.833 0.00 0.00 0.00 5.68
2563 11784 4.798907 CACCTCTTTATATATAGCACGGCG 59.201 45.833 4.80 4.80 0.00 6.46
2564 11785 3.797256 CCTCTTTATATATAGCACGGCGC 59.203 47.826 6.90 0.00 42.91 6.53
2565 11786 3.777478 TCTTTATATATAGCACGGCGCC 58.223 45.455 19.07 19.07 44.04 6.53
2566 11787 3.193903 TCTTTATATATAGCACGGCGCCA 59.806 43.478 28.98 6.55 44.04 5.69
2567 11788 2.863401 TATATATAGCACGGCGCCAG 57.137 50.000 28.98 21.29 44.04 4.85
2568 11789 0.175760 ATATATAGCACGGCGCCAGG 59.824 55.000 28.98 18.86 44.04 4.45
2569 11790 1.884075 TATATAGCACGGCGCCAGGG 61.884 60.000 28.98 21.22 44.04 4.45
2582 11803 3.996621 CAGGGGCCCACCAACCAT 61.997 66.667 27.72 0.00 42.91 3.55
2583 11804 2.204385 AGGGGCCCACCAACCATA 60.204 61.111 27.72 0.00 42.91 2.74
2584 11805 2.278738 GGGGCCCACCAACCATAG 59.721 66.667 26.86 0.00 42.91 2.23
2585 11806 2.622447 GGGGCCCACCAACCATAGT 61.622 63.158 26.86 0.00 42.91 2.12
2586 11807 1.386550 GGGCCCACCAACCATAGTT 59.613 57.895 19.95 0.00 39.85 2.24
2587 11808 0.252057 GGGCCCACCAACCATAGTTT 60.252 55.000 19.95 0.00 39.85 2.66
2588 11809 0.894835 GGCCCACCAACCATAGTTTG 59.105 55.000 0.00 0.00 32.45 2.93
2589 11810 2.505457 GGCCCACCAACCATAGTTTGG 61.505 57.143 0.00 0.00 43.43 3.28
2597 11818 1.510844 CCATAGTTTGGTTGGGCGC 59.489 57.895 0.00 0.00 40.99 6.53
2598 11819 1.510844 CATAGTTTGGTTGGGCGCC 59.489 57.895 21.18 21.18 0.00 6.53
2599 11820 1.680989 ATAGTTTGGTTGGGCGCCC 60.681 57.895 39.40 39.40 0.00 6.13
2600 11821 3.871850 TAGTTTGGTTGGGCGCCCC 62.872 63.158 41.75 27.38 45.71 5.80
2633 11854 2.824489 GCAAGGGCCCGTTAGAGC 60.824 66.667 18.44 9.31 0.00 4.09
2638 11859 2.818274 GGCCCGTTAGAGCCGTTG 60.818 66.667 0.00 0.00 39.87 4.10
2639 11860 2.818274 GCCCGTTAGAGCCGTTGG 60.818 66.667 0.00 0.00 0.00 3.77
2640 11861 2.125269 CCCGTTAGAGCCGTTGGG 60.125 66.667 0.00 0.00 0.00 4.12
2651 11872 4.367023 CGTTGGGCTCGAACGGGA 62.367 66.667 11.85 0.00 41.95 5.14
2652 11873 2.434359 GTTGGGCTCGAACGGGAG 60.434 66.667 0.00 0.00 37.11 4.30
2653 11874 3.702048 TTGGGCTCGAACGGGAGG 61.702 66.667 0.00 0.00 34.56 4.30
2654 11875 4.689549 TGGGCTCGAACGGGAGGA 62.690 66.667 0.00 0.00 34.56 3.71
2655 11876 3.839432 GGGCTCGAACGGGAGGAG 61.839 72.222 0.00 0.00 34.56 3.69
2656 11877 2.754658 GGCTCGAACGGGAGGAGA 60.755 66.667 0.00 0.00 34.56 3.71
2657 11878 2.128507 GGCTCGAACGGGAGGAGAT 61.129 63.158 0.00 0.00 34.56 2.75
2658 11879 1.360911 GCTCGAACGGGAGGAGATC 59.639 63.158 0.00 0.00 34.56 2.75
2659 11880 1.384989 GCTCGAACGGGAGGAGATCA 61.385 60.000 0.00 0.00 34.56 2.92
2660 11881 1.103803 CTCGAACGGGAGGAGATCAA 58.896 55.000 0.00 0.00 0.00 2.57
2661 11882 0.815734 TCGAACGGGAGGAGATCAAC 59.184 55.000 0.00 0.00 0.00 3.18
2662 11883 0.179108 CGAACGGGAGGAGATCAACC 60.179 60.000 0.00 0.00 0.00 3.77
2663 11884 1.196012 GAACGGGAGGAGATCAACCT 58.804 55.000 10.57 10.57 40.80 3.50
2664 11885 2.385803 GAACGGGAGGAGATCAACCTA 58.614 52.381 10.71 0.00 37.93 3.08
2665 11886 2.544844 ACGGGAGGAGATCAACCTAA 57.455 50.000 10.71 0.00 37.93 2.69
2666 11887 2.108970 ACGGGAGGAGATCAACCTAAC 58.891 52.381 10.71 7.66 37.93 2.34
2667 11888 2.108168 CGGGAGGAGATCAACCTAACA 58.892 52.381 10.71 0.00 37.93 2.41
2668 11889 2.500098 CGGGAGGAGATCAACCTAACAA 59.500 50.000 10.71 0.00 37.93 2.83
2669 11890 3.134804 CGGGAGGAGATCAACCTAACAAT 59.865 47.826 10.71 0.00 37.93 2.71
2670 11891 4.455606 GGGAGGAGATCAACCTAACAATG 58.544 47.826 10.71 0.00 37.93 2.82
2671 11892 4.080299 GGGAGGAGATCAACCTAACAATGT 60.080 45.833 10.71 0.00 37.93 2.71
2672 11893 5.501156 GGAGGAGATCAACCTAACAATGTT 58.499 41.667 3.43 3.43 37.93 2.71
2673 11894 6.352737 GGGAGGAGATCAACCTAACAATGTTA 60.353 42.308 5.66 5.66 37.93 2.41
2674 11895 7.283329 GGAGGAGATCAACCTAACAATGTTAT 58.717 38.462 6.27 0.00 37.93 1.89
2675 11896 7.227512 GGAGGAGATCAACCTAACAATGTTATG 59.772 40.741 6.27 6.59 37.93 1.90
2676 11897 7.633789 AGGAGATCAACCTAACAATGTTATGT 58.366 34.615 6.27 7.24 35.84 2.29
2677 11898 7.770897 AGGAGATCAACCTAACAATGTTATGTC 59.229 37.037 13.04 4.29 35.84 3.06
2678 11899 7.770897 GGAGATCAACCTAACAATGTTATGTCT 59.229 37.037 13.04 10.42 31.81 3.41
2679 11900 8.498054 AGATCAACCTAACAATGTTATGTCTG 57.502 34.615 13.04 12.73 31.81 3.51
2680 11901 8.103305 AGATCAACCTAACAATGTTATGTCTGT 58.897 33.333 13.04 4.21 31.81 3.41
2681 11902 9.378551 GATCAACCTAACAATGTTATGTCTGTA 57.621 33.333 13.04 2.52 31.81 2.74
2682 11903 8.542497 TCAACCTAACAATGTTATGTCTGTAC 57.458 34.615 13.04 0.00 31.81 2.90
2683 11904 7.604927 TCAACCTAACAATGTTATGTCTGTACC 59.395 37.037 13.04 0.00 31.81 3.34
2684 11905 6.412214 ACCTAACAATGTTATGTCTGTACCC 58.588 40.000 6.27 0.00 31.81 3.69
2685 11906 6.214819 ACCTAACAATGTTATGTCTGTACCCT 59.785 38.462 6.27 0.00 31.81 4.34
2686 11907 6.538742 CCTAACAATGTTATGTCTGTACCCTG 59.461 42.308 6.27 0.00 31.81 4.45
2687 11908 4.261801 ACAATGTTATGTCTGTACCCTGC 58.738 43.478 0.00 0.00 0.00 4.85
2688 11909 4.260985 CAATGTTATGTCTGTACCCTGCA 58.739 43.478 0.00 0.00 0.00 4.41
2689 11910 3.328382 TGTTATGTCTGTACCCTGCAC 57.672 47.619 0.00 0.00 0.00 4.57
2690 11911 2.903784 TGTTATGTCTGTACCCTGCACT 59.096 45.455 0.00 0.00 0.00 4.40
2691 11912 3.262420 GTTATGTCTGTACCCTGCACTG 58.738 50.000 0.00 0.00 0.00 3.66
2692 11913 0.036010 ATGTCTGTACCCTGCACTGC 60.036 55.000 0.00 0.00 0.00 4.40
2693 11914 1.371183 GTCTGTACCCTGCACTGCA 59.629 57.895 3.11 3.11 36.92 4.41
2694 11915 0.036010 GTCTGTACCCTGCACTGCAT 60.036 55.000 3.64 0.00 38.13 3.96
2695 11916 0.250234 TCTGTACCCTGCACTGCATC 59.750 55.000 3.64 0.00 38.13 3.91
2696 11917 0.251354 CTGTACCCTGCACTGCATCT 59.749 55.000 3.64 0.00 38.13 2.90
2697 11918 0.036105 TGTACCCTGCACTGCATCTG 60.036 55.000 3.64 0.00 38.13 2.90
2698 11919 1.078214 TACCCTGCACTGCATCTGC 60.078 57.895 3.64 9.14 38.13 4.26
2699 11920 2.541547 TACCCTGCACTGCATCTGCC 62.542 60.000 3.64 0.00 38.13 4.85
2700 11921 2.045242 CCTGCACTGCATCTGCCT 60.045 61.111 3.64 0.00 38.13 4.75
2701 11922 2.407428 CCTGCACTGCATCTGCCTG 61.407 63.158 3.64 6.78 38.13 4.85
2702 11923 3.052620 CTGCACTGCATCTGCCTGC 62.053 63.158 3.64 12.62 41.46 4.85
2703 11924 3.823330 GCACTGCATCTGCCTGCC 61.823 66.667 9.64 0.00 41.58 4.85
2704 11925 2.045242 CACTGCATCTGCCTGCCT 60.045 61.111 0.00 0.00 41.58 4.75
2705 11926 2.045242 ACTGCATCTGCCTGCCTG 60.045 61.111 0.00 0.00 41.58 4.85
2706 11927 3.518998 CTGCATCTGCCTGCCTGC 61.519 66.667 0.00 2.60 41.58 4.85
2715 11936 2.361610 CCTGCCTGCCCGTTGATT 60.362 61.111 0.00 0.00 0.00 2.57
2716 11937 1.077787 CCTGCCTGCCCGTTGATTA 60.078 57.895 0.00 0.00 0.00 1.75
2717 11938 0.466189 CCTGCCTGCCCGTTGATTAT 60.466 55.000 0.00 0.00 0.00 1.28
2718 11939 0.947244 CTGCCTGCCCGTTGATTATC 59.053 55.000 0.00 0.00 0.00 1.75
2719 11940 0.254462 TGCCTGCCCGTTGATTATCA 59.746 50.000 0.00 0.00 0.00 2.15
2720 11941 1.340502 TGCCTGCCCGTTGATTATCAA 60.341 47.619 3.20 3.20 33.32 2.57
2721 11942 1.334869 GCCTGCCCGTTGATTATCAAG 59.665 52.381 8.00 3.13 37.00 3.02
2722 11943 1.334869 CCTGCCCGTTGATTATCAAGC 59.665 52.381 8.00 9.02 37.00 4.01
2723 11944 2.016318 CTGCCCGTTGATTATCAAGCA 58.984 47.619 15.96 15.96 37.00 3.91
2724 11945 2.423185 CTGCCCGTTGATTATCAAGCAA 59.577 45.455 17.02 0.00 37.00 3.91
2725 11946 2.423185 TGCCCGTTGATTATCAAGCAAG 59.577 45.455 14.96 5.62 37.48 4.01
2726 11947 2.796032 GCCCGTTGATTATCAAGCAAGC 60.796 50.000 8.00 5.78 37.48 4.01
2727 11948 2.423185 CCCGTTGATTATCAAGCAAGCA 59.577 45.455 8.00 0.00 37.48 3.91
2728 11949 3.488047 CCCGTTGATTATCAAGCAAGCAG 60.488 47.826 8.00 0.00 37.48 4.24
2729 11950 3.374988 CCGTTGATTATCAAGCAAGCAGA 59.625 43.478 8.00 0.00 37.48 4.26
2730 11951 4.036027 CCGTTGATTATCAAGCAAGCAGAT 59.964 41.667 8.00 0.21 37.48 2.90
2731 11952 5.449588 CCGTTGATTATCAAGCAAGCAGATT 60.450 40.000 8.00 0.00 37.48 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 3.927142 CGAAATCACTAGTGGAGGAACAC 59.073 47.826 22.48 6.03 41.63 3.32
6 7 3.616560 GCGAAATCACTAGTGGAGGAACA 60.617 47.826 22.48 1.68 0.00 3.18
7 8 2.930682 GCGAAATCACTAGTGGAGGAAC 59.069 50.000 22.48 8.82 0.00 3.62
8 9 2.832129 AGCGAAATCACTAGTGGAGGAA 59.168 45.455 22.48 3.23 0.00 3.36
9 10 2.457598 AGCGAAATCACTAGTGGAGGA 58.542 47.619 22.48 3.63 0.00 3.71
10 11 2.969628 AGCGAAATCACTAGTGGAGG 57.030 50.000 22.48 9.05 0.00 4.30
11 12 8.085296 AGATATTTAGCGAAATCACTAGTGGAG 58.915 37.037 22.48 10.50 36.62 3.86
12 13 7.952671 AGATATTTAGCGAAATCACTAGTGGA 58.047 34.615 22.48 9.94 36.62 4.02
13 14 7.061210 CGAGATATTTAGCGAAATCACTAGTGG 59.939 40.741 22.48 7.34 36.62 4.00
14 15 7.591795 ACGAGATATTTAGCGAAATCACTAGTG 59.408 37.037 17.17 17.17 36.62 2.74
15 16 7.649973 ACGAGATATTTAGCGAAATCACTAGT 58.350 34.615 8.15 11.60 36.62 2.57
16 17 9.608617 TTACGAGATATTTAGCGAAATCACTAG 57.391 33.333 8.15 11.08 36.62 2.57
17 18 9.390795 GTTACGAGATATTTAGCGAAATCACTA 57.609 33.333 8.15 0.00 36.62 2.74
18 19 7.919091 TGTTACGAGATATTTAGCGAAATCACT 59.081 33.333 8.15 8.99 36.62 3.41
19 20 8.057812 TGTTACGAGATATTTAGCGAAATCAC 57.942 34.615 8.15 4.63 36.62 3.06
20 21 8.637281 TTGTTACGAGATATTTAGCGAAATCA 57.363 30.769 8.15 0.00 36.62 2.57
21 22 8.215132 CCTTGTTACGAGATATTTAGCGAAATC 58.785 37.037 8.15 0.00 36.62 2.17
22 23 7.924412 TCCTTGTTACGAGATATTTAGCGAAAT 59.076 33.333 9.79 9.79 38.79 2.17
23 24 7.221452 GTCCTTGTTACGAGATATTTAGCGAAA 59.779 37.037 0.31 0.00 0.00 3.46
24 25 6.694411 GTCCTTGTTACGAGATATTTAGCGAA 59.306 38.462 0.31 0.00 0.00 4.70
25 26 6.204359 GTCCTTGTTACGAGATATTTAGCGA 58.796 40.000 0.31 0.00 0.00 4.93
26 27 5.115171 CGTCCTTGTTACGAGATATTTAGCG 59.885 44.000 0.31 0.00 42.90 4.26
27 28 5.107951 GCGTCCTTGTTACGAGATATTTAGC 60.108 44.000 0.31 0.00 42.90 3.09
39 40 1.429463 CCAGTGAGCGTCCTTGTTAC 58.571 55.000 0.00 0.00 0.00 2.50
82 83 5.761818 AAACATTAGCGCTTACAAAATGC 57.238 34.783 23.31 0.00 32.10 3.56
92 93 8.807581 GCAAATATCTTTAAAAACATTAGCGCT 58.192 29.630 17.26 17.26 0.00 5.92
265 295 9.864034 CACGAGTTGATGGTCATAAATATTTAC 57.136 33.333 10.07 0.82 0.00 2.01
514 549 1.348036 GGGGACCGGAGAGAATAATGG 59.652 57.143 9.46 0.00 40.86 3.16
515 550 2.841442 GGGGACCGGAGAGAATAATG 57.159 55.000 9.46 0.00 40.86 1.90
529 564 1.077429 GGATGGAGCAGTTGGGGAC 60.077 63.158 0.00 0.00 0.00 4.46
530 565 0.920763 ATGGATGGAGCAGTTGGGGA 60.921 55.000 0.00 0.00 0.00 4.81
531 566 0.466922 GATGGATGGAGCAGTTGGGG 60.467 60.000 0.00 0.00 0.00 4.96
532 567 0.466922 GGATGGATGGAGCAGTTGGG 60.467 60.000 0.00 0.00 0.00 4.12
533 568 0.466922 GGGATGGATGGAGCAGTTGG 60.467 60.000 0.00 0.00 0.00 3.77
534 569 0.466922 GGGGATGGATGGAGCAGTTG 60.467 60.000 0.00 0.00 0.00 3.16
535 570 0.920763 TGGGGATGGATGGAGCAGTT 60.921 55.000 0.00 0.00 0.00 3.16
536 571 0.920763 TTGGGGATGGATGGAGCAGT 60.921 55.000 0.00 0.00 0.00 4.40
537 572 0.481567 ATTGGGGATGGATGGAGCAG 59.518 55.000 0.00 0.00 0.00 4.24
538 573 0.479815 GATTGGGGATGGATGGAGCA 59.520 55.000 0.00 0.00 0.00 4.26
539 574 0.251519 GGATTGGGGATGGATGGAGC 60.252 60.000 0.00 0.00 0.00 4.70
540 575 1.151760 TGGATTGGGGATGGATGGAG 58.848 55.000 0.00 0.00 0.00 3.86
541 576 1.618084 TTGGATTGGGGATGGATGGA 58.382 50.000 0.00 0.00 0.00 3.41
542 577 2.253610 CATTGGATTGGGGATGGATGG 58.746 52.381 0.00 0.00 0.00 3.51
543 578 1.621814 GCATTGGATTGGGGATGGATG 59.378 52.381 0.00 0.00 0.00 3.51
544 579 1.483686 GGCATTGGATTGGGGATGGAT 60.484 52.381 0.00 0.00 0.00 3.41
545 580 0.105555 GGCATTGGATTGGGGATGGA 60.106 55.000 0.00 0.00 0.00 3.41
546 581 1.466025 CGGCATTGGATTGGGGATGG 61.466 60.000 0.00 0.00 0.00 3.51
547 582 2.043625 CGGCATTGGATTGGGGATG 58.956 57.895 0.00 0.00 0.00 3.51
564 599 2.051435 CCTCTGCTCGATCTCGCG 60.051 66.667 0.00 0.00 39.60 5.87
565 600 2.354539 GCCTCTGCTCGATCTCGC 60.355 66.667 0.00 0.00 39.60 5.03
568 603 3.910490 GCGGCCTCTGCTCGATCT 61.910 66.667 0.00 0.00 37.74 2.75
569 604 4.959596 GGCGGCCTCTGCTCGATC 62.960 72.222 12.87 0.00 37.74 3.69
790 8620 0.543174 AGGAGGACGAAGAGCCAAGT 60.543 55.000 0.00 0.00 0.00 3.16
791 8621 0.108424 CAGGAGGACGAAGAGCCAAG 60.108 60.000 0.00 0.00 0.00 3.61
793 8623 2.650116 GCAGGAGGACGAAGAGCCA 61.650 63.158 0.00 0.00 0.00 4.75
794 8624 2.185608 GCAGGAGGACGAAGAGCC 59.814 66.667 0.00 0.00 0.00 4.70
795 8625 2.202676 CGCAGGAGGACGAAGAGC 60.203 66.667 0.00 0.00 0.00 4.09
904 8734 2.645192 TTCAGCGTCGATGCAGGGA 61.645 57.895 30.02 20.63 37.31 4.20
919 8749 3.998672 GACGGAGCCCCACGTTCA 61.999 66.667 0.00 0.00 44.24 3.18
920 8750 3.236003 AAGACGGAGCCCCACGTTC 62.236 63.158 0.00 0.00 44.24 3.95
942 8779 0.895530 TGAACCGCTTCTCCTCGAAT 59.104 50.000 0.00 0.00 0.00 3.34
984 8823 1.065764 CATCGCCGAGAATCCGTCA 59.934 57.895 0.00 0.00 0.00 4.35
1014 8853 1.284982 GGTAGATGTAGCGGCGCATG 61.285 60.000 35.02 1.09 0.00 4.06
1027 9561 0.683504 AGGACGACCTTGCGGTAGAT 60.684 55.000 0.00 0.00 45.73 1.98
1063 9597 2.528743 CGGTGATGAGCATGGCGAC 61.529 63.158 0.00 0.00 0.00 5.19
1302 9850 2.587340 ACACTGGTGAACACGCCA 59.413 55.556 7.78 0.00 41.16 5.69
1323 9878 3.402681 GGCTGCCCTGGCTCTACA 61.403 66.667 7.66 0.00 42.51 2.74
1355 9931 1.370064 GCCGTCACCAGGTACTTGT 59.630 57.895 4.10 0.00 34.60 3.16
1417 9999 0.796312 AATGTCAACCGATGCGTGAC 59.204 50.000 0.00 0.00 0.00 3.67
1510 10111 2.505982 CGAGCCATTCACCCCGAT 59.494 61.111 0.00 0.00 0.00 4.18
1771 10392 3.750130 ACTGCATCTGAACTTTGCTAGTG 59.250 43.478 3.02 0.00 37.12 2.74
1860 10489 9.091784 GAAAAGAAGAAGCTGAAAATCAAACTT 57.908 29.630 0.00 0.00 0.00 2.66
1893 10522 1.573829 TTGTTTGGTGCCGCGATCTC 61.574 55.000 8.23 0.00 0.00 2.75
1934 10576 3.193691 ACACTGATTAGACTGTTCCCTCG 59.806 47.826 0.00 0.00 0.00 4.63
1995 10637 9.216117 GGCAATAGTTACTTACTAATATGGGTG 57.784 37.037 0.00 0.00 42.45 4.61
2052 10694 8.966868 TGTTTTCCTCTGTTTAGTTCTGAATTT 58.033 29.630 0.00 0.00 0.00 1.82
2074 10716 7.844269 AGGGGAGGCATAAAATTATTACTGTTT 59.156 33.333 0.00 0.00 0.00 2.83
2098 11316 6.405508 CCCAACTTCAGATTGAAATGATCAGG 60.406 42.308 0.09 0.00 39.77 3.86
2122 11340 3.756963 CTGACCTAAAAGTTAAGCCCACC 59.243 47.826 0.00 0.00 0.00 4.61
2130 11348 4.019321 AGCAGCCATCTGACCTAAAAGTTA 60.019 41.667 0.00 0.00 42.95 2.24
2156 11374 1.664306 GCAGGCAGCAGCTTTCTTT 59.336 52.632 0.00 0.00 44.79 2.52
2157 11375 3.363351 GCAGGCAGCAGCTTTCTT 58.637 55.556 0.00 0.00 44.79 2.52
2166 11384 4.704833 TCTCAACGGGCAGGCAGC 62.705 66.667 0.00 0.00 44.65 5.25
2167 11385 2.435586 CTCTCAACGGGCAGGCAG 60.436 66.667 0.00 0.00 0.00 4.85
2168 11386 4.704833 GCTCTCAACGGGCAGGCA 62.705 66.667 0.00 0.00 0.00 4.75
2169 11387 4.400961 AGCTCTCAACGGGCAGGC 62.401 66.667 0.00 0.00 0.00 4.85
2170 11388 2.435586 CAGCTCTCAACGGGCAGG 60.436 66.667 0.00 0.00 0.00 4.85
2171 11389 1.302033 AACAGCTCTCAACGGGCAG 60.302 57.895 0.00 0.00 0.00 4.85
2172 11390 1.597854 CAACAGCTCTCAACGGGCA 60.598 57.895 0.00 0.00 0.00 5.36
2173 11391 0.320421 TACAACAGCTCTCAACGGGC 60.320 55.000 0.00 0.00 0.00 6.13
2174 11392 1.270094 TGTACAACAGCTCTCAACGGG 60.270 52.381 0.00 0.00 0.00 5.28
2175 11393 2.148916 TGTACAACAGCTCTCAACGG 57.851 50.000 0.00 0.00 0.00 4.44
2176 11394 4.457810 CAAATGTACAACAGCTCTCAACG 58.542 43.478 0.00 0.00 0.00 4.10
2177 11395 4.275936 ACCAAATGTACAACAGCTCTCAAC 59.724 41.667 0.00 0.00 0.00 3.18
2178 11396 4.460263 ACCAAATGTACAACAGCTCTCAA 58.540 39.130 0.00 0.00 0.00 3.02
2179 11397 4.085357 ACCAAATGTACAACAGCTCTCA 57.915 40.909 0.00 0.00 0.00 3.27
2180 11398 5.008613 TCAAACCAAATGTACAACAGCTCTC 59.991 40.000 0.00 0.00 0.00 3.20
2181 11399 4.887071 TCAAACCAAATGTACAACAGCTCT 59.113 37.500 0.00 0.00 0.00 4.09
2192 11410 3.228188 TCTGGCTCTCAAACCAAATGT 57.772 42.857 0.00 0.00 34.96 2.71
2221 11439 8.492673 TGTTGTGCTAACTAATCCTAATTCAG 57.507 34.615 6.10 0.00 0.00 3.02
2237 11455 8.630054 ATTTAGTGTTCCTAATTGTTGTGCTA 57.370 30.769 0.00 0.00 35.59 3.49
2238 11456 6.952773 TTTAGTGTTCCTAATTGTTGTGCT 57.047 33.333 0.00 0.00 35.59 4.40
2251 11469 5.246307 ACTGACTTGCCTATTTAGTGTTCC 58.754 41.667 0.00 0.00 0.00 3.62
2256 11477 6.014156 ACTCTGAACTGACTTGCCTATTTAGT 60.014 38.462 0.00 0.00 0.00 2.24
2262 11483 4.689612 AAACTCTGAACTGACTTGCCTA 57.310 40.909 0.00 0.00 0.00 3.93
2286 11507 3.490439 TGTCTTGGAGATGCTCAACAA 57.510 42.857 0.00 0.00 31.08 2.83
2287 11508 3.244665 ACATGTCTTGGAGATGCTCAACA 60.245 43.478 0.00 0.00 36.90 3.33
2288 11509 3.341823 ACATGTCTTGGAGATGCTCAAC 58.658 45.455 0.00 0.00 36.90 3.18
2300 11521 9.645059 TCTAAAGTCTCTATCAAACATGTCTTG 57.355 33.333 0.00 6.62 0.00 3.02
2311 11532 6.239396 CCTACCCGATCTAAAGTCTCTATCA 58.761 44.000 0.00 0.00 0.00 2.15
2312 11533 5.124297 GCCTACCCGATCTAAAGTCTCTATC 59.876 48.000 0.00 0.00 0.00 2.08
2313 11534 5.011586 GCCTACCCGATCTAAAGTCTCTAT 58.988 45.833 0.00 0.00 0.00 1.98
2314 11535 4.104420 AGCCTACCCGATCTAAAGTCTCTA 59.896 45.833 0.00 0.00 0.00 2.43
2315 11536 3.117436 AGCCTACCCGATCTAAAGTCTCT 60.117 47.826 0.00 0.00 0.00 3.10
2316 11537 3.224269 AGCCTACCCGATCTAAAGTCTC 58.776 50.000 0.00 0.00 0.00 3.36
2317 11538 3.315880 AGCCTACCCGATCTAAAGTCT 57.684 47.619 0.00 0.00 0.00 3.24
2318 11539 4.396522 TCTAGCCTACCCGATCTAAAGTC 58.603 47.826 0.00 0.00 0.00 3.01
2319 11540 4.450305 TCTAGCCTACCCGATCTAAAGT 57.550 45.455 0.00 0.00 0.00 2.66
2320 11541 5.986501 AATCTAGCCTACCCGATCTAAAG 57.013 43.478 0.00 0.00 0.00 1.85
2321 11542 6.309357 TGTAATCTAGCCTACCCGATCTAAA 58.691 40.000 0.00 0.00 0.00 1.85
2322 11543 5.884322 TGTAATCTAGCCTACCCGATCTAA 58.116 41.667 0.00 0.00 0.00 2.10
2323 11544 5.509832 TGTAATCTAGCCTACCCGATCTA 57.490 43.478 0.00 0.00 0.00 1.98
2324 11545 4.383931 TGTAATCTAGCCTACCCGATCT 57.616 45.455 0.00 0.00 0.00 2.75
2325 11546 4.201930 CGATGTAATCTAGCCTACCCGATC 60.202 50.000 0.00 0.00 42.58 3.69
2326 11547 3.695060 CGATGTAATCTAGCCTACCCGAT 59.305 47.826 0.00 0.00 42.58 4.18
2327 11548 3.079578 CGATGTAATCTAGCCTACCCGA 58.920 50.000 0.00 0.00 42.58 5.14
2328 11549 2.163815 CCGATGTAATCTAGCCTACCCG 59.836 54.545 0.00 0.00 42.58 5.28
2329 11550 3.163467 ACCGATGTAATCTAGCCTACCC 58.837 50.000 0.00 0.00 42.58 3.69
2330 11551 5.008980 ACTACCGATGTAATCTAGCCTACC 58.991 45.833 0.00 0.00 42.58 3.18
2331 11552 6.206243 TGAACTACCGATGTAATCTAGCCTAC 59.794 42.308 0.00 0.00 42.58 3.18
2332 11553 6.206243 GTGAACTACCGATGTAATCTAGCCTA 59.794 42.308 0.00 0.00 42.58 3.93
2333 11554 5.009811 GTGAACTACCGATGTAATCTAGCCT 59.990 44.000 0.00 0.00 42.58 4.58
2334 11555 5.221130 GTGAACTACCGATGTAATCTAGCC 58.779 45.833 0.00 0.00 42.58 3.93
2335 11556 5.221130 GGTGAACTACCGATGTAATCTAGC 58.779 45.833 0.00 0.00 42.58 3.42
2349 11570 3.996480 AGTCAAGCAGAAGGTGAACTAC 58.004 45.455 0.00 0.00 0.00 2.73
2350 11571 4.100963 TCAAGTCAAGCAGAAGGTGAACTA 59.899 41.667 0.00 0.00 0.00 2.24
2351 11572 3.118261 TCAAGTCAAGCAGAAGGTGAACT 60.118 43.478 0.00 0.00 0.00 3.01
2352 11573 3.206150 TCAAGTCAAGCAGAAGGTGAAC 58.794 45.455 0.00 0.00 0.00 3.18
2353 11574 3.470709 CTCAAGTCAAGCAGAAGGTGAA 58.529 45.455 0.00 0.00 0.00 3.18
2354 11575 2.808202 GCTCAAGTCAAGCAGAAGGTGA 60.808 50.000 0.00 0.00 39.61 4.02
2355 11576 1.534595 GCTCAAGTCAAGCAGAAGGTG 59.465 52.381 0.00 0.00 39.61 4.00
2356 11577 1.544314 GGCTCAAGTCAAGCAGAAGGT 60.544 52.381 0.00 0.00 41.66 3.50
2357 11578 1.163554 GGCTCAAGTCAAGCAGAAGG 58.836 55.000 0.00 0.00 41.66 3.46
2358 11579 0.795085 CGGCTCAAGTCAAGCAGAAG 59.205 55.000 0.00 0.00 41.66 2.85
2359 11580 0.603707 CCGGCTCAAGTCAAGCAGAA 60.604 55.000 0.00 0.00 41.66 3.02
2360 11581 1.004560 CCGGCTCAAGTCAAGCAGA 60.005 57.895 0.00 0.00 41.66 4.26
2361 11582 1.004560 TCCGGCTCAAGTCAAGCAG 60.005 57.895 0.00 0.00 41.66 4.24
2362 11583 1.004560 CTCCGGCTCAAGTCAAGCA 60.005 57.895 0.00 0.00 41.66 3.91
2363 11584 1.743252 CCTCCGGCTCAAGTCAAGC 60.743 63.158 0.00 0.00 39.09 4.01
2364 11585 1.743252 GCCTCCGGCTCAAGTCAAG 60.743 63.158 0.00 0.00 46.69 3.02
2365 11586 2.347490 GCCTCCGGCTCAAGTCAA 59.653 61.111 0.00 0.00 46.69 3.18
2375 11596 4.181010 CTCCACCATGGCCTCCGG 62.181 72.222 13.04 5.00 37.47 5.14
2376 11597 4.181010 CCTCCACCATGGCCTCCG 62.181 72.222 13.04 0.00 37.47 4.63
2377 11598 3.813724 CCCTCCACCATGGCCTCC 61.814 72.222 13.04 0.00 37.47 4.30
2378 11599 3.813724 CCCCTCCACCATGGCCTC 61.814 72.222 13.04 0.00 37.47 4.70
2379 11600 4.701437 ACCCCTCCACCATGGCCT 62.701 66.667 13.04 0.00 37.47 5.19
2380 11601 4.447342 CACCCCTCCACCATGGCC 62.447 72.222 13.04 0.00 37.47 5.36
2381 11602 4.447342 CCACCCCTCCACCATGGC 62.447 72.222 13.04 0.00 37.47 4.40
2382 11603 2.941025 ACCACCCCTCCACCATGG 60.941 66.667 11.19 11.19 39.43 3.66
2383 11604 2.677228 GACCACCCCTCCACCATG 59.323 66.667 0.00 0.00 0.00 3.66
2384 11605 3.009115 CGACCACCCCTCCACCAT 61.009 66.667 0.00 0.00 0.00 3.55
2387 11608 4.016706 CACCGACCACCCCTCCAC 62.017 72.222 0.00 0.00 0.00 4.02
2388 11609 3.556038 ATCACCGACCACCCCTCCA 62.556 63.158 0.00 0.00 0.00 3.86
2389 11610 2.687566 ATCACCGACCACCCCTCC 60.688 66.667 0.00 0.00 0.00 4.30
2390 11611 2.584608 CATCACCGACCACCCCTC 59.415 66.667 0.00 0.00 0.00 4.30
2391 11612 3.009115 CCATCACCGACCACCCCT 61.009 66.667 0.00 0.00 0.00 4.79
2392 11613 4.796495 GCCATCACCGACCACCCC 62.796 72.222 0.00 0.00 0.00 4.95
2395 11616 4.760047 AGCGCCATCACCGACCAC 62.760 66.667 2.29 0.00 0.00 4.16
2396 11617 4.758251 CAGCGCCATCACCGACCA 62.758 66.667 2.29 0.00 0.00 4.02
2397 11618 4.760047 ACAGCGCCATCACCGACC 62.760 66.667 2.29 0.00 0.00 4.79
2398 11619 3.490759 CACAGCGCCATCACCGAC 61.491 66.667 2.29 0.00 0.00 4.79
2399 11620 4.002506 ACACAGCGCCATCACCGA 62.003 61.111 2.29 0.00 0.00 4.69
2400 11621 3.792047 CACACAGCGCCATCACCG 61.792 66.667 2.29 0.00 0.00 4.94
2401 11622 2.669569 ACACACAGCGCCATCACC 60.670 61.111 2.29 0.00 0.00 4.02
2402 11623 2.253758 ACACACACAGCGCCATCAC 61.254 57.895 2.29 0.00 0.00 3.06
2403 11624 2.110835 ACACACACAGCGCCATCA 59.889 55.556 2.29 0.00 0.00 3.07
2404 11625 2.253758 ACACACACACAGCGCCATC 61.254 57.895 2.29 0.00 0.00 3.51
2405 11626 2.203195 ACACACACACAGCGCCAT 60.203 55.556 2.29 0.00 0.00 4.40
2406 11627 3.201297 CACACACACACAGCGCCA 61.201 61.111 2.29 0.00 0.00 5.69
2407 11628 3.202001 ACACACACACACAGCGCC 61.202 61.111 2.29 0.00 0.00 6.53
2408 11629 2.023181 CACACACACACACAGCGC 59.977 61.111 0.00 0.00 0.00 5.92
2409 11630 1.813337 TCCACACACACACACAGCG 60.813 57.895 0.00 0.00 0.00 5.18
2410 11631 1.721487 GTCCACACACACACACAGC 59.279 57.895 0.00 0.00 0.00 4.40
2411 11632 0.459411 TCGTCCACACACACACACAG 60.459 55.000 0.00 0.00 0.00 3.66
2412 11633 0.037232 TTCGTCCACACACACACACA 60.037 50.000 0.00 0.00 0.00 3.72
2413 11634 0.650512 CTTCGTCCACACACACACAC 59.349 55.000 0.00 0.00 0.00 3.82
2414 11635 0.248012 ACTTCGTCCACACACACACA 59.752 50.000 0.00 0.00 0.00 3.72
2415 11636 0.650512 CACTTCGTCCACACACACAC 59.349 55.000 0.00 0.00 0.00 3.82
2416 11637 0.461163 CCACTTCGTCCACACACACA 60.461 55.000 0.00 0.00 0.00 3.72
2417 11638 0.461339 ACCACTTCGTCCACACACAC 60.461 55.000 0.00 0.00 0.00 3.82
2418 11639 0.461163 CACCACTTCGTCCACACACA 60.461 55.000 0.00 0.00 0.00 3.72
2419 11640 1.157870 CCACCACTTCGTCCACACAC 61.158 60.000 0.00 0.00 0.00 3.82
2420 11641 1.145156 CCACCACTTCGTCCACACA 59.855 57.895 0.00 0.00 0.00 3.72
2421 11642 2.251642 GCCACCACTTCGTCCACAC 61.252 63.158 0.00 0.00 0.00 3.82
2422 11643 2.110213 GCCACCACTTCGTCCACA 59.890 61.111 0.00 0.00 0.00 4.17
2423 11644 3.041940 CGCCACCACTTCGTCCAC 61.042 66.667 0.00 0.00 0.00 4.02
2424 11645 4.308458 CCGCCACCACTTCGTCCA 62.308 66.667 0.00 0.00 0.00 4.02
2425 11646 4.309950 ACCGCCACCACTTCGTCC 62.310 66.667 0.00 0.00 0.00 4.79
2426 11647 3.041940 CACCGCCACCACTTCGTC 61.042 66.667 0.00 0.00 0.00 4.20
2428 11649 4.988598 AGCACCGCCACCACTTCG 62.989 66.667 0.00 0.00 0.00 3.79
2429 11650 2.594592 AAGCACCGCCACCACTTC 60.595 61.111 0.00 0.00 0.00 3.01
2430 11651 2.594592 GAAGCACCGCCACCACTT 60.595 61.111 0.00 0.00 0.00 3.16
2431 11652 4.643387 GGAAGCACCGCCACCACT 62.643 66.667 0.00 0.00 0.00 4.00
2434 11655 4.660938 AAGGGAAGCACCGCCACC 62.661 66.667 0.00 0.00 40.11 4.61
2435 11656 3.056328 GAAGGGAAGCACCGCCAC 61.056 66.667 0.00 0.00 40.11 5.01
2436 11657 4.697756 CGAAGGGAAGCACCGCCA 62.698 66.667 0.00 0.00 40.11 5.69
2439 11660 2.358737 AAGCGAAGGGAAGCACCG 60.359 61.111 0.00 0.00 40.11 4.94
2440 11661 1.003233 AGAAGCGAAGGGAAGCACC 60.003 57.895 0.00 0.00 35.48 5.01
2441 11662 1.916697 GCAGAAGCGAAGGGAAGCAC 61.917 60.000 0.00 0.00 35.48 4.40
2442 11663 1.672356 GCAGAAGCGAAGGGAAGCA 60.672 57.895 0.00 0.00 35.48 3.91
2443 11664 3.182312 GCAGAAGCGAAGGGAAGC 58.818 61.111 0.00 0.00 0.00 3.86
2453 11674 0.460311 TCTAGGGTTAGCGCAGAAGC 59.540 55.000 11.47 13.01 37.42 3.86
2454 11675 2.605823 CGATCTAGGGTTAGCGCAGAAG 60.606 54.545 11.47 0.00 0.00 2.85
2455 11676 1.337071 CGATCTAGGGTTAGCGCAGAA 59.663 52.381 11.47 0.00 0.00 3.02
2456 11677 0.952280 CGATCTAGGGTTAGCGCAGA 59.048 55.000 11.47 1.08 0.00 4.26
2457 11678 0.039074 CCGATCTAGGGTTAGCGCAG 60.039 60.000 11.47 0.00 0.00 5.18
2458 11679 0.466739 TCCGATCTAGGGTTAGCGCA 60.467 55.000 11.47 0.00 0.00 6.09
2459 11680 0.672342 TTCCGATCTAGGGTTAGCGC 59.328 55.000 0.00 0.00 0.00 5.92
2460 11681 1.334779 CGTTCCGATCTAGGGTTAGCG 60.335 57.143 0.00 0.00 0.00 4.26
2461 11682 1.000496 CCGTTCCGATCTAGGGTTAGC 60.000 57.143 0.00 0.00 0.00 3.09
2462 11683 2.579873 TCCGTTCCGATCTAGGGTTAG 58.420 52.381 0.00 0.00 0.00 2.34
2463 11684 2.734755 TCCGTTCCGATCTAGGGTTA 57.265 50.000 0.00 0.00 0.00 2.85
2464 11685 1.687123 CATCCGTTCCGATCTAGGGTT 59.313 52.381 0.00 0.00 0.00 4.11
2465 11686 1.329256 CATCCGTTCCGATCTAGGGT 58.671 55.000 0.00 0.00 0.00 4.34
2466 11687 1.329256 ACATCCGTTCCGATCTAGGG 58.671 55.000 0.00 0.00 0.00 3.53
2467 11688 2.488545 CCTACATCCGTTCCGATCTAGG 59.511 54.545 0.00 0.00 28.38 3.02
2468 11689 3.058155 CACCTACATCCGTTCCGATCTAG 60.058 52.174 0.00 0.00 0.00 2.43
2469 11690 2.882761 CACCTACATCCGTTCCGATCTA 59.117 50.000 0.00 0.00 0.00 1.98
2470 11691 1.681793 CACCTACATCCGTTCCGATCT 59.318 52.381 0.00 0.00 0.00 2.75
2471 11692 1.269621 CCACCTACATCCGTTCCGATC 60.270 57.143 0.00 0.00 0.00 3.69
2472 11693 0.750850 CCACCTACATCCGTTCCGAT 59.249 55.000 0.00 0.00 0.00 4.18
2473 11694 1.324740 CCCACCTACATCCGTTCCGA 61.325 60.000 0.00 0.00 0.00 4.55
2474 11695 1.143183 CCCACCTACATCCGTTCCG 59.857 63.158 0.00 0.00 0.00 4.30
2475 11696 1.525442 CCCCACCTACATCCGTTCC 59.475 63.158 0.00 0.00 0.00 3.62
2476 11697 1.525442 CCCCCACCTACATCCGTTC 59.475 63.158 0.00 0.00 0.00 3.95
2477 11698 3.735725 CCCCCACCTACATCCGTT 58.264 61.111 0.00 0.00 0.00 4.44
2500 11721 4.025401 CAAGGTTCACCGTGCGCC 62.025 66.667 4.18 0.00 38.58 6.53
2505 11726 1.342174 ACACGATACAAGGTTCACCGT 59.658 47.619 0.00 0.00 42.08 4.83
2506 11727 1.724623 CACACGATACAAGGTTCACCG 59.275 52.381 0.00 0.00 42.08 4.94
2507 11728 1.463444 GCACACGATACAAGGTTCACC 59.537 52.381 0.00 0.00 0.00 4.02
2508 11729 1.126113 CGCACACGATACAAGGTTCAC 59.874 52.381 0.00 0.00 43.93 3.18
2509 11730 1.424403 CGCACACGATACAAGGTTCA 58.576 50.000 0.00 0.00 43.93 3.18
2510 11731 0.719465 CCGCACACGATACAAGGTTC 59.281 55.000 0.00 0.00 43.93 3.62
2511 11732 1.296056 GCCGCACACGATACAAGGTT 61.296 55.000 0.00 0.00 43.93 3.50
2512 11733 1.740296 GCCGCACACGATACAAGGT 60.740 57.895 0.00 0.00 43.93 3.50
2513 11734 2.461110 GGCCGCACACGATACAAGG 61.461 63.158 0.00 0.00 43.93 3.61
2514 11735 2.798501 CGGCCGCACACGATACAAG 61.799 63.158 14.67 0.00 43.93 3.16
2515 11736 2.811747 CGGCCGCACACGATACAA 60.812 61.111 14.67 0.00 43.93 2.41
2516 11737 4.805231 CCGGCCGCACACGATACA 62.805 66.667 22.85 0.00 43.93 2.29
2531 11752 1.345715 ATAAAGAGGTGGGGGAGCCG 61.346 60.000 0.00 0.00 0.00 5.52
2532 11753 1.815757 TATAAAGAGGTGGGGGAGCC 58.184 55.000 0.00 0.00 0.00 4.70
2533 11754 5.163290 GCTATATATAAAGAGGTGGGGGAGC 60.163 48.000 0.00 0.00 0.00 4.70
2534 11755 5.964477 TGCTATATATAAAGAGGTGGGGGAG 59.036 44.000 0.00 0.00 0.00 4.30
2535 11756 5.724854 GTGCTATATATAAAGAGGTGGGGGA 59.275 44.000 0.00 0.00 0.00 4.81
2536 11757 5.395324 CGTGCTATATATAAAGAGGTGGGGG 60.395 48.000 0.00 0.00 0.00 5.40
2537 11758 5.395324 CCGTGCTATATATAAAGAGGTGGGG 60.395 48.000 0.00 0.00 0.00 4.96
2538 11759 5.661458 CCGTGCTATATATAAAGAGGTGGG 58.339 45.833 0.00 0.00 0.00 4.61
2539 11760 5.109903 GCCGTGCTATATATAAAGAGGTGG 58.890 45.833 0.00 0.00 0.00 4.61
2540 11761 4.798907 CGCCGTGCTATATATAAAGAGGTG 59.201 45.833 0.00 0.00 0.00 4.00
2541 11762 4.677250 GCGCCGTGCTATATATAAAGAGGT 60.677 45.833 0.00 0.00 41.73 3.85
2542 11763 3.797256 GCGCCGTGCTATATATAAAGAGG 59.203 47.826 0.00 0.00 41.73 3.69
2543 11764 3.797256 GGCGCCGTGCTATATATAAAGAG 59.203 47.826 12.58 0.00 45.43 2.85
2544 11765 3.193903 TGGCGCCGTGCTATATATAAAGA 59.806 43.478 23.90 0.00 45.43 2.52
2545 11766 3.517602 TGGCGCCGTGCTATATATAAAG 58.482 45.455 23.90 0.00 45.43 1.85
2546 11767 3.517602 CTGGCGCCGTGCTATATATAAA 58.482 45.455 23.90 0.00 45.43 1.40
2547 11768 2.159156 CCTGGCGCCGTGCTATATATAA 60.159 50.000 23.90 0.00 45.43 0.98
2548 11769 1.407618 CCTGGCGCCGTGCTATATATA 59.592 52.381 23.90 0.00 45.43 0.86
2549 11770 0.175760 CCTGGCGCCGTGCTATATAT 59.824 55.000 23.90 0.00 45.43 0.86
2550 11771 1.589630 CCTGGCGCCGTGCTATATA 59.410 57.895 23.90 0.00 45.43 0.86
2551 11772 2.343758 CCTGGCGCCGTGCTATAT 59.656 61.111 23.90 0.00 45.43 0.86
2552 11773 3.923864 CCCTGGCGCCGTGCTATA 61.924 66.667 23.90 0.00 45.43 1.31
2565 11786 2.572333 CTATGGTTGGTGGGCCCCTG 62.572 65.000 22.27 0.00 0.00 4.45
2566 11787 2.204385 TATGGTTGGTGGGCCCCT 60.204 61.111 22.27 0.00 0.00 4.79
2567 11788 2.163021 AACTATGGTTGGTGGGCCCC 62.163 60.000 22.27 10.91 33.96 5.80
2568 11789 0.252057 AAACTATGGTTGGTGGGCCC 60.252 55.000 17.59 17.59 35.63 5.80
2569 11790 0.894835 CAAACTATGGTTGGTGGGCC 59.105 55.000 0.00 0.00 35.63 5.80
2570 11791 0.894835 CCAAACTATGGTTGGTGGGC 59.105 55.000 6.24 0.00 44.85 5.36
2580 11801 1.510844 GGCGCCCAACCAAACTATG 59.489 57.895 18.11 0.00 0.00 2.23
2581 11802 1.680989 GGGCGCCCAACCAAACTAT 60.681 57.895 40.73 0.00 35.81 2.12
2582 11803 2.282603 GGGCGCCCAACCAAACTA 60.283 61.111 40.73 0.00 35.81 2.24
2600 11821 4.899239 GCCTCACGCCCTGATCGG 62.899 72.222 0.00 0.00 0.00 4.18
2601 11822 3.664025 TTGCCTCACGCCCTGATCG 62.664 63.158 0.00 0.00 36.24 3.69
2602 11823 1.817099 CTTGCCTCACGCCCTGATC 60.817 63.158 0.00 0.00 36.24 2.92
2603 11824 2.270205 CTTGCCTCACGCCCTGAT 59.730 61.111 0.00 0.00 36.24 2.90
2604 11825 4.020617 CCTTGCCTCACGCCCTGA 62.021 66.667 0.00 0.00 36.24 3.86
2616 11837 2.824489 GCTCTAACGGGCCCTTGC 60.824 66.667 22.43 6.36 0.00 4.01
2617 11838 2.124695 GGCTCTAACGGGCCCTTG 60.125 66.667 22.43 7.85 42.30 3.61
2618 11839 3.782443 CGGCTCTAACGGGCCCTT 61.782 66.667 22.43 15.56 45.01 3.95
2620 11841 4.091939 AACGGCTCTAACGGGCCC 62.092 66.667 13.57 13.57 45.01 5.80
2621 11842 2.818274 CAACGGCTCTAACGGGCC 60.818 66.667 0.00 0.00 44.43 5.80
2622 11843 2.818274 CCAACGGCTCTAACGGGC 60.818 66.667 0.00 0.00 35.23 6.13
2623 11844 2.125269 CCCAACGGCTCTAACGGG 60.125 66.667 0.00 0.00 35.23 5.28
2634 11855 4.367023 TCCCGTTCGAGCCCAACG 62.367 66.667 0.00 0.00 45.03 4.10
2635 11856 2.434359 CTCCCGTTCGAGCCCAAC 60.434 66.667 0.00 0.00 0.00 3.77
2636 11857 3.702048 CCTCCCGTTCGAGCCCAA 61.702 66.667 0.00 0.00 0.00 4.12
2637 11858 4.689549 TCCTCCCGTTCGAGCCCA 62.690 66.667 0.00 0.00 0.00 5.36
2638 11859 3.839432 CTCCTCCCGTTCGAGCCC 61.839 72.222 0.00 0.00 0.00 5.19
2639 11860 2.077821 GATCTCCTCCCGTTCGAGCC 62.078 65.000 0.00 0.00 0.00 4.70
2640 11861 1.360911 GATCTCCTCCCGTTCGAGC 59.639 63.158 0.00 0.00 0.00 5.03
2641 11862 1.103803 TTGATCTCCTCCCGTTCGAG 58.896 55.000 0.00 0.00 0.00 4.04
2642 11863 0.815734 GTTGATCTCCTCCCGTTCGA 59.184 55.000 0.00 0.00 0.00 3.71
2643 11864 0.179108 GGTTGATCTCCTCCCGTTCG 60.179 60.000 0.00 0.00 0.00 3.95
2644 11865 1.196012 AGGTTGATCTCCTCCCGTTC 58.804 55.000 4.58 0.00 0.00 3.95
2645 11866 2.500504 GTTAGGTTGATCTCCTCCCGTT 59.499 50.000 12.06 0.00 36.60 4.44
2646 11867 2.108970 GTTAGGTTGATCTCCTCCCGT 58.891 52.381 12.06 0.00 36.60 5.28
2647 11868 2.108168 TGTTAGGTTGATCTCCTCCCG 58.892 52.381 12.06 0.00 36.60 5.14
2648 11869 4.080299 ACATTGTTAGGTTGATCTCCTCCC 60.080 45.833 12.06 6.43 36.60 4.30
2649 11870 5.104259 ACATTGTTAGGTTGATCTCCTCC 57.896 43.478 12.06 6.70 36.60 4.30
2650 11871 7.770897 ACATAACATTGTTAGGTTGATCTCCTC 59.229 37.037 18.37 2.53 36.60 3.71
2651 11872 7.633789 ACATAACATTGTTAGGTTGATCTCCT 58.366 34.615 18.37 13.00 38.91 3.69
2652 11873 7.770897 AGACATAACATTGTTAGGTTGATCTCC 59.229 37.037 23.18 11.72 29.89 3.71
2653 11874 8.607459 CAGACATAACATTGTTAGGTTGATCTC 58.393 37.037 23.18 12.29 29.89 2.75
2654 11875 8.103305 ACAGACATAACATTGTTAGGTTGATCT 58.897 33.333 23.18 14.80 29.89 2.75
2655 11876 8.268850 ACAGACATAACATTGTTAGGTTGATC 57.731 34.615 23.18 13.15 29.89 2.92
2656 11877 9.162764 GTACAGACATAACATTGTTAGGTTGAT 57.837 33.333 23.18 15.27 29.89 2.57
2657 11878 7.604927 GGTACAGACATAACATTGTTAGGTTGA 59.395 37.037 23.18 9.98 29.89 3.18
2658 11879 7.148306 GGGTACAGACATAACATTGTTAGGTTG 60.148 40.741 23.18 22.06 29.89 3.77
2659 11880 6.882678 GGGTACAGACATAACATTGTTAGGTT 59.117 38.462 23.18 13.09 32.30 3.50
2660 11881 6.214819 AGGGTACAGACATAACATTGTTAGGT 59.785 38.462 22.70 22.70 0.00 3.08
2661 11882 6.538742 CAGGGTACAGACATAACATTGTTAGG 59.461 42.308 17.19 17.19 0.00 2.69
2662 11883 6.037172 GCAGGGTACAGACATAACATTGTTAG 59.963 42.308 14.18 9.12 0.00 2.34
2663 11884 5.878116 GCAGGGTACAGACATAACATTGTTA 59.122 40.000 11.47 11.47 0.00 2.41
2664 11885 4.700213 GCAGGGTACAGACATAACATTGTT 59.300 41.667 7.30 7.30 0.00 2.83
2665 11886 4.261801 GCAGGGTACAGACATAACATTGT 58.738 43.478 0.00 0.00 0.00 2.71
2666 11887 4.094887 GTGCAGGGTACAGACATAACATTG 59.905 45.833 0.00 0.00 0.00 2.82
2667 11888 4.019321 AGTGCAGGGTACAGACATAACATT 60.019 41.667 0.00 0.00 0.00 2.71
2668 11889 3.519510 AGTGCAGGGTACAGACATAACAT 59.480 43.478 0.00 0.00 0.00 2.71
2669 11890 2.903784 AGTGCAGGGTACAGACATAACA 59.096 45.455 0.00 0.00 0.00 2.41
2670 11891 3.262420 CAGTGCAGGGTACAGACATAAC 58.738 50.000 0.00 0.00 0.00 1.89
2671 11892 2.354704 GCAGTGCAGGGTACAGACATAA 60.355 50.000 11.09 0.00 0.00 1.90
2672 11893 1.207089 GCAGTGCAGGGTACAGACATA 59.793 52.381 11.09 0.00 0.00 2.29
2673 11894 0.036010 GCAGTGCAGGGTACAGACAT 60.036 55.000 11.09 0.00 0.00 3.06
2674 11895 1.371183 GCAGTGCAGGGTACAGACA 59.629 57.895 11.09 0.00 0.00 3.41
2675 11896 0.036010 ATGCAGTGCAGGGTACAGAC 60.036 55.000 24.20 0.00 43.65 3.51
2676 11897 0.250234 GATGCAGTGCAGGGTACAGA 59.750 55.000 24.20 0.00 43.65 3.41
2677 11898 0.251354 AGATGCAGTGCAGGGTACAG 59.749 55.000 24.20 0.00 43.65 2.74
2678 11899 0.036105 CAGATGCAGTGCAGGGTACA 60.036 55.000 24.20 0.00 43.65 2.90
2679 11900 1.372087 GCAGATGCAGTGCAGGGTAC 61.372 60.000 24.20 11.59 43.65 3.34
2680 11901 1.078214 GCAGATGCAGTGCAGGGTA 60.078 57.895 24.20 0.00 43.65 3.69
2681 11902 2.360852 GCAGATGCAGTGCAGGGT 60.361 61.111 24.20 6.69 43.65 4.34
2682 11903 3.138798 GGCAGATGCAGTGCAGGG 61.139 66.667 24.20 15.50 43.65 4.45
2683 11904 2.045242 AGGCAGATGCAGTGCAGG 60.045 61.111 24.20 15.86 43.65 4.85
2684 11905 3.052620 GCAGGCAGATGCAGTGCAG 62.053 63.158 24.20 11.20 45.95 4.41
2685 11906 3.060000 GCAGGCAGATGCAGTGCA 61.060 61.111 22.22 22.22 45.95 4.57
2698 11919 0.466189 ATAATCAACGGGCAGGCAGG 60.466 55.000 0.00 0.00 0.00 4.85
2699 11920 0.947244 GATAATCAACGGGCAGGCAG 59.053 55.000 0.00 0.00 0.00 4.85
2700 11921 0.254462 TGATAATCAACGGGCAGGCA 59.746 50.000 0.00 0.00 0.00 4.75
2701 11922 1.334869 CTTGATAATCAACGGGCAGGC 59.665 52.381 0.00 0.00 32.21 4.85
2702 11923 1.334869 GCTTGATAATCAACGGGCAGG 59.665 52.381 0.00 0.00 32.21 4.85
2703 11924 2.016318 TGCTTGATAATCAACGGGCAG 58.984 47.619 0.00 0.00 32.50 4.85
2704 11925 2.121291 TGCTTGATAATCAACGGGCA 57.879 45.000 0.00 0.00 34.22 5.36
2705 11926 2.796032 GCTTGCTTGATAATCAACGGGC 60.796 50.000 0.00 0.00 32.21 6.13
2706 11927 2.423185 TGCTTGCTTGATAATCAACGGG 59.577 45.455 0.00 0.00 32.21 5.28
2707 11928 3.374988 TCTGCTTGCTTGATAATCAACGG 59.625 43.478 0.00 0.00 32.21 4.44
2708 11929 4.604843 TCTGCTTGCTTGATAATCAACG 57.395 40.909 0.00 0.00 32.21 4.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.