Multiple sequence alignment - TraesCS2D01G567000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G567000 chr2D 100.000 4027 0 0 1 4027 635780189 635784215 0.000000e+00 7437.0
1 TraesCS2D01G567000 chr2D 93.636 110 7 0 3881 3990 532305889 532305998 8.950000e-37 165.0
2 TraesCS2D01G567000 chr2D 94.444 108 4 2 3893 3998 593274340 593274233 8.950000e-37 165.0
3 TraesCS2D01G567000 chr2D 77.564 312 43 18 647 938 566316225 566315921 3.220000e-36 163.0
4 TraesCS2D01G567000 chr2D 90.000 120 10 2 3894 4013 380431686 380431569 1.940000e-33 154.0
5 TraesCS2D01G567000 chrUn 89.439 1837 116 40 2108 3877 124815636 124813811 0.000000e+00 2246.0
6 TraesCS2D01G567000 chrUn 90.389 1363 66 23 717 2049 124816975 124815648 0.000000e+00 1731.0
7 TraesCS2D01G567000 chrUn 96.939 98 3 0 3893 3990 305213229 305213132 8.950000e-37 165.0
8 TraesCS2D01G567000 chr2B 90.146 1441 76 27 526 1950 793796605 793797995 0.000000e+00 1814.0
9 TraesCS2D01G567000 chr2B 91.542 1206 73 16 2108 3289 793798098 793799298 0.000000e+00 1635.0
10 TraesCS2D01G567000 chr2B 88.468 607 14 21 3333 3891 793799301 793799899 0.000000e+00 682.0
11 TraesCS2D01G567000 chr2B 77.320 485 58 30 1 454 793796036 793796499 5.200000e-59 239.0
12 TraesCS2D01G567000 chr2B 76.331 338 47 22 670 988 574052572 574052895 2.510000e-32 150.0
13 TraesCS2D01G567000 chr2B 87.387 111 9 5 647 754 23654763 23654655 5.470000e-24 122.0
14 TraesCS2D01G567000 chr2B 93.617 47 2 1 3982 4027 793799908 793799954 7.220000e-08 69.4
15 TraesCS2D01G567000 chr6D 78.596 1168 152 41 1681 2832 2522977 2521892 0.000000e+00 682.0
16 TraesCS2D01G567000 chr6D 78.919 555 83 13 1689 2229 2499376 2499910 2.980000e-91 346.0
17 TraesCS2D01G567000 chr6D 78.333 360 43 24 647 986 76676301 76675957 2.450000e-47 200.0
18 TraesCS2D01G567000 chr6B 76.820 1346 167 72 1833 3145 19320230 19321463 1.230000e-174 623.0
19 TraesCS2D01G567000 chr6B 79.240 684 78 31 2128 2793 291330 291967 6.220000e-113 418.0
20 TraesCS2D01G567000 chr6B 86.607 112 10 5 647 755 619065376 619065267 7.070000e-23 119.0
21 TraesCS2D01G567000 chr1A 82.545 613 62 19 990 1597 475473123 475472551 7.770000e-137 497.0
22 TraesCS2D01G567000 chr1A 81.981 616 63 20 990 1597 475452744 475452169 2.820000e-131 479.0
23 TraesCS2D01G567000 chr1A 78.919 370 24 25 647 988 315060486 315060143 6.820000e-48 202.0
24 TraesCS2D01G567000 chr1D 81.863 612 67 22 990 1597 376183855 376183284 3.640000e-130 475.0
25 TraesCS2D01G567000 chr1D 77.838 370 31 24 647 988 487506673 487507019 8.890000e-42 182.0
26 TraesCS2D01G567000 chr1D 96.078 102 4 0 3893 3994 174151271 174151170 2.490000e-37 167.0
27 TraesCS2D01G567000 chr1D 96.117 103 3 1 3894 3995 422309019 422309121 2.490000e-37 167.0
28 TraesCS2D01G567000 chr1D 95.000 100 5 0 3894 3993 472517875 472517776 1.500000e-34 158.0
29 TraesCS2D01G567000 chr4D 78.116 361 46 21 647 988 63851220 63851566 8.830000e-47 198.0
30 TraesCS2D01G567000 chr4D 78.082 365 39 19 647 988 220185917 220186263 4.110000e-45 193.0
31 TraesCS2D01G567000 chr7D 77.839 361 47 21 647 988 87025890 87026236 4.110000e-45 193.0
32 TraesCS2D01G567000 chr7D 97.000 100 3 0 3894 3993 60439596 60439695 6.920000e-38 169.0
33 TraesCS2D01G567000 chr3D 78.378 370 29 22 647 988 358047869 358048215 4.110000e-45 193.0
34 TraesCS2D01G567000 chr5B 78.202 367 29 22 650 988 698600823 698600480 1.910000e-43 187.0
35 TraesCS2D01G567000 chr1B 77.348 362 45 23 647 988 564349612 564349956 3.200000e-41 180.0
36 TraesCS2D01G567000 chr5D 77.436 390 27 24 647 1005 414379328 414378969 4.140000e-40 176.0
37 TraesCS2D01G567000 chr5D 77.261 387 31 28 647 1005 393441562 393441205 1.490000e-39 174.0
38 TraesCS2D01G567000 chr7B 95.283 106 4 1 3887 3992 479326880 479326984 2.490000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G567000 chr2D 635780189 635784215 4026 False 7437.00 7437 100.0000 1 4027 1 chr2D.!!$F2 4026
1 TraesCS2D01G567000 chrUn 124813811 124816975 3164 True 1988.50 2246 89.9140 717 3877 2 chrUn.!!$R2 3160
2 TraesCS2D01G567000 chr2B 793796036 793799954 3918 False 887.88 1814 88.2186 1 4027 5 chr2B.!!$F2 4026
3 TraesCS2D01G567000 chr6D 2521892 2522977 1085 True 682.00 682 78.5960 1681 2832 1 chr6D.!!$R1 1151
4 TraesCS2D01G567000 chr6D 2499376 2499910 534 False 346.00 346 78.9190 1689 2229 1 chr6D.!!$F1 540
5 TraesCS2D01G567000 chr6B 19320230 19321463 1233 False 623.00 623 76.8200 1833 3145 1 chr6B.!!$F2 1312
6 TraesCS2D01G567000 chr6B 291330 291967 637 False 418.00 418 79.2400 2128 2793 1 chr6B.!!$F1 665
7 TraesCS2D01G567000 chr1A 475472551 475473123 572 True 497.00 497 82.5450 990 1597 1 chr1A.!!$R3 607
8 TraesCS2D01G567000 chr1A 475452169 475452744 575 True 479.00 479 81.9810 990 1597 1 chr1A.!!$R2 607
9 TraesCS2D01G567000 chr1D 376183284 376183855 571 True 475.00 475 81.8630 990 1597 1 chr1D.!!$R2 607

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
769 887 0.038166 TGGGCCTCCTCATGTTCAAC 59.962 55.0 4.53 0.0 0.0 3.18 F
1498 1635 0.765510 GAGGACCCTGGTGTTTCACT 59.234 55.0 0.00 0.0 34.4 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1665 1811 0.386476 TGTCGCTGGACGTGTAGTTT 59.614 50.0 0.0 0.0 46.49 2.66 R
3395 3655 0.312102 GCTCCTGCAACCAGTCAAAC 59.688 55.0 0.0 0.0 37.38 2.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 72 0.491823 TCTCTTCCTCCTCCAACCCA 59.508 55.000 0.00 0.00 0.00 4.51
62 73 1.132527 TCTCTTCCTCCTCCAACCCAA 60.133 52.381 0.00 0.00 0.00 4.12
63 74 1.705186 CTCTTCCTCCTCCAACCCAAA 59.295 52.381 0.00 0.00 0.00 3.28
64 75 1.705186 TCTTCCTCCTCCAACCCAAAG 59.295 52.381 0.00 0.00 0.00 2.77
65 76 1.705186 CTTCCTCCTCCAACCCAAAGA 59.295 52.381 0.00 0.00 0.00 2.52
118 136 3.782443 CCGTTTCCCCTCCTCCGG 61.782 72.222 0.00 0.00 0.00 5.14
122 140 4.667935 TTCCCCTCCTCCGGCCAA 62.668 66.667 2.24 0.00 0.00 4.52
128 146 3.164977 TCCTCCGGCCAACACACA 61.165 61.111 2.24 0.00 0.00 3.72
129 147 2.978010 CCTCCGGCCAACACACAC 60.978 66.667 2.24 0.00 0.00 3.82
130 148 2.203139 CTCCGGCCAACACACACA 60.203 61.111 2.24 0.00 0.00 3.72
131 149 2.515057 TCCGGCCAACACACACAC 60.515 61.111 2.24 0.00 0.00 3.82
132 150 2.515991 CCGGCCAACACACACACT 60.516 61.111 2.24 0.00 0.00 3.55
133 151 1.227704 CCGGCCAACACACACACTA 60.228 57.895 2.24 0.00 0.00 2.74
136 154 0.179029 GGCCAACACACACACTACCT 60.179 55.000 0.00 0.00 0.00 3.08
144 162 2.126071 CACACTACCTCCGCCGTG 60.126 66.667 0.00 0.00 0.00 4.94
186 210 3.593794 GCCGCGTCTCCCGTATCT 61.594 66.667 4.92 0.00 39.32 1.98
187 211 2.256591 GCCGCGTCTCCCGTATCTA 61.257 63.158 4.92 0.00 39.32 1.98
188 212 1.584380 GCCGCGTCTCCCGTATCTAT 61.584 60.000 4.92 0.00 39.32 1.98
189 213 0.447011 CCGCGTCTCCCGTATCTATC 59.553 60.000 4.92 0.00 39.32 2.08
200 224 1.675116 CGTATCTATCCGCTCCCTCGA 60.675 57.143 0.00 0.00 0.00 4.04
239 290 1.804601 CGTAAGTCCCCCAACAACTC 58.195 55.000 0.00 0.00 0.00 3.01
240 291 1.346722 CGTAAGTCCCCCAACAACTCT 59.653 52.381 0.00 0.00 0.00 3.24
241 292 2.612221 CGTAAGTCCCCCAACAACTCTC 60.612 54.545 0.00 0.00 0.00 3.20
244 295 1.132689 AGTCCCCCAACAACTCTCTCT 60.133 52.381 0.00 0.00 0.00 3.10
245 296 1.276705 GTCCCCCAACAACTCTCTCTC 59.723 57.143 0.00 0.00 0.00 3.20
248 299 2.534990 CCCCAACAACTCTCTCTCTCT 58.465 52.381 0.00 0.00 0.00 3.10
250 301 3.430453 CCCAACAACTCTCTCTCTCTCT 58.570 50.000 0.00 0.00 0.00 3.10
253 304 4.766891 CCAACAACTCTCTCTCTCTCTCTT 59.233 45.833 0.00 0.00 0.00 2.85
255 306 4.335416 ACAACTCTCTCTCTCTCTCTTGG 58.665 47.826 0.00 0.00 0.00 3.61
257 308 4.657814 ACTCTCTCTCTCTCTCTTGGTT 57.342 45.455 0.00 0.00 0.00 3.67
258 309 4.589908 ACTCTCTCTCTCTCTCTTGGTTC 58.410 47.826 0.00 0.00 0.00 3.62
259 310 3.605634 TCTCTCTCTCTCTCTTGGTTCG 58.394 50.000 0.00 0.00 0.00 3.95
260 311 3.262151 TCTCTCTCTCTCTCTTGGTTCGA 59.738 47.826 0.00 0.00 0.00 3.71
261 312 3.340034 TCTCTCTCTCTCTTGGTTCGAC 58.660 50.000 0.00 0.00 0.00 4.20
262 313 3.008594 TCTCTCTCTCTCTTGGTTCGACT 59.991 47.826 0.00 0.00 0.00 4.18
263 314 3.340034 TCTCTCTCTCTTGGTTCGACTC 58.660 50.000 0.00 0.00 0.00 3.36
264 315 2.077627 TCTCTCTCTTGGTTCGACTCG 58.922 52.381 0.00 0.00 0.00 4.18
265 316 2.077627 CTCTCTCTTGGTTCGACTCGA 58.922 52.381 0.00 0.00 0.00 4.04
266 317 1.805345 TCTCTCTTGGTTCGACTCGAC 59.195 52.381 0.00 0.00 34.89 4.20
267 318 0.879765 TCTCTTGGTTCGACTCGACC 59.120 55.000 0.00 6.85 34.89 4.79
268 319 0.882474 CTCTTGGTTCGACTCGACCT 59.118 55.000 16.21 0.00 34.89 3.85
269 320 2.082231 CTCTTGGTTCGACTCGACCTA 58.918 52.381 16.21 10.64 34.89 3.08
270 321 2.082231 TCTTGGTTCGACTCGACCTAG 58.918 52.381 17.23 17.23 34.89 3.02
271 322 2.082231 CTTGGTTCGACTCGACCTAGA 58.918 52.381 17.90 0.00 34.75 2.43
272 323 2.414994 TGGTTCGACTCGACCTAGAT 57.585 50.000 16.21 0.00 34.89 1.98
273 324 3.548745 TGGTTCGACTCGACCTAGATA 57.451 47.619 16.21 0.00 34.89 1.98
274 325 3.464907 TGGTTCGACTCGACCTAGATAG 58.535 50.000 16.21 0.00 34.89 2.08
275 326 3.133542 TGGTTCGACTCGACCTAGATAGA 59.866 47.826 16.21 0.00 34.89 1.98
276 327 4.202336 TGGTTCGACTCGACCTAGATAGAT 60.202 45.833 16.21 0.00 34.89 1.98
277 328 5.011431 TGGTTCGACTCGACCTAGATAGATA 59.989 44.000 16.21 0.00 34.89 1.98
278 329 5.577945 GGTTCGACTCGACCTAGATAGATAG 59.422 48.000 0.00 0.00 34.89 2.08
279 330 6.389091 GTTCGACTCGACCTAGATAGATAGA 58.611 44.000 0.00 0.00 34.89 1.98
280 331 6.778834 TCGACTCGACCTAGATAGATAGAT 57.221 41.667 0.00 0.00 0.00 1.98
281 332 7.878547 TCGACTCGACCTAGATAGATAGATA 57.121 40.000 0.00 0.00 0.00 1.98
282 333 7.933396 TCGACTCGACCTAGATAGATAGATAG 58.067 42.308 0.00 0.00 0.00 2.08
283 334 7.774625 TCGACTCGACCTAGATAGATAGATAGA 59.225 40.741 0.00 0.00 0.00 1.98
284 335 8.573885 CGACTCGACCTAGATAGATAGATAGAT 58.426 40.741 0.00 0.00 0.00 1.98
323 374 3.046390 CCGTCTCAATGCTCGATTCTAC 58.954 50.000 0.00 0.00 0.00 2.59
350 401 9.869844 GAGTATTCGTTATCAAAGGAATGAATG 57.130 33.333 13.46 0.00 45.25 2.67
351 402 9.396022 AGTATTCGTTATCAAAGGAATGAATGT 57.604 29.630 13.46 0.00 45.25 2.71
353 404 6.344572 TCGTTATCAAAGGAATGAATGTCG 57.655 37.500 0.00 0.00 32.06 4.35
368 423 1.051008 TGTCGATCCCATCCCATCTG 58.949 55.000 0.00 0.00 0.00 2.90
369 424 0.322975 GTCGATCCCATCCCATCTGG 59.677 60.000 0.00 0.00 0.00 3.86
386 447 6.239487 CCCATCTGGAGTCGTATTATTTACCA 60.239 42.308 0.00 0.00 37.39 3.25
391 452 9.529823 TCTGGAGTCGTATTATTTACCATCTAT 57.470 33.333 0.00 0.00 0.00 1.98
392 453 9.790389 CTGGAGTCGTATTATTTACCATCTATC 57.210 37.037 0.00 0.00 0.00 2.08
393 454 9.529823 TGGAGTCGTATTATTTACCATCTATCT 57.470 33.333 0.00 0.00 0.00 1.98
394 455 9.790389 GGAGTCGTATTATTTACCATCTATCTG 57.210 37.037 0.00 0.00 0.00 2.90
412 473 8.840833 TCTATCTGTATCTGTATCTGTCTGTC 57.159 38.462 0.00 0.00 0.00 3.51
414 475 6.934048 TCTGTATCTGTATCTGTCTGTCTG 57.066 41.667 0.00 0.00 0.00 3.51
425 486 8.678199 TGTATCTGTCTGTCTGTATTTACTCTG 58.322 37.037 0.00 0.00 0.00 3.35
454 515 0.461516 CAGTCCGCACATCTGCATCT 60.462 55.000 0.00 0.00 44.50 2.90
457 518 1.818363 CCGCACATCTGCATCTGCT 60.818 57.895 3.53 0.00 44.50 4.24
459 520 1.292992 CGCACATCTGCATCTGCTTA 58.707 50.000 3.53 0.00 44.50 3.09
460 521 1.004185 CGCACATCTGCATCTGCTTAC 60.004 52.381 3.53 0.00 44.50 2.34
461 522 2.286872 GCACATCTGCATCTGCTTACT 58.713 47.619 3.53 0.00 43.62 2.24
462 523 2.287373 GCACATCTGCATCTGCTTACTC 59.713 50.000 3.53 0.00 43.62 2.59
463 524 3.528532 CACATCTGCATCTGCTTACTCA 58.471 45.455 3.53 0.00 42.66 3.41
464 525 4.127907 CACATCTGCATCTGCTTACTCAT 58.872 43.478 3.53 0.00 42.66 2.90
466 527 5.177142 CACATCTGCATCTGCTTACTCATAC 59.823 44.000 3.53 0.00 42.66 2.39
469 530 6.907853 TCTGCATCTGCTTACTCATACTAT 57.092 37.500 3.53 0.00 42.66 2.12
470 531 7.295322 TCTGCATCTGCTTACTCATACTATT 57.705 36.000 3.53 0.00 42.66 1.73
472 533 7.654923 TCTGCATCTGCTTACTCATACTATTTG 59.345 37.037 3.53 0.00 42.66 2.32
473 534 7.275183 TGCATCTGCTTACTCATACTATTTGT 58.725 34.615 3.53 0.00 42.66 2.83
474 535 7.770433 TGCATCTGCTTACTCATACTATTTGTT 59.230 33.333 3.53 0.00 42.66 2.83
486 547 8.208718 TCATACTATTTGTTTACATCACCTGC 57.791 34.615 0.00 0.00 0.00 4.85
488 549 6.743575 ACTATTTGTTTACATCACCTGCTC 57.256 37.500 0.00 0.00 0.00 4.26
489 550 6.476378 ACTATTTGTTTACATCACCTGCTCT 58.524 36.000 0.00 0.00 0.00 4.09
490 551 5.886960 ATTTGTTTACATCACCTGCTCTC 57.113 39.130 0.00 0.00 0.00 3.20
492 553 4.623932 TGTTTACATCACCTGCTCTCTT 57.376 40.909 0.00 0.00 0.00 2.85
494 555 4.284490 TGTTTACATCACCTGCTCTCTTCT 59.716 41.667 0.00 0.00 0.00 2.85
496 557 3.608316 ACATCACCTGCTCTCTTCTTC 57.392 47.619 0.00 0.00 0.00 2.87
497 558 3.172339 ACATCACCTGCTCTCTTCTTCT 58.828 45.455 0.00 0.00 0.00 2.85
498 559 3.582208 ACATCACCTGCTCTCTTCTTCTT 59.418 43.478 0.00 0.00 0.00 2.52
499 560 3.951775 TCACCTGCTCTCTTCTTCTTC 57.048 47.619 0.00 0.00 0.00 2.87
500 561 3.505386 TCACCTGCTCTCTTCTTCTTCT 58.495 45.455 0.00 0.00 0.00 2.85
501 562 3.900601 TCACCTGCTCTCTTCTTCTTCTT 59.099 43.478 0.00 0.00 0.00 2.52
502 563 4.021544 TCACCTGCTCTCTTCTTCTTCTTC 60.022 45.833 0.00 0.00 0.00 2.87
504 565 4.592778 ACCTGCTCTCTTCTTCTTCTTCTT 59.407 41.667 0.00 0.00 0.00 2.52
506 567 5.047092 CCTGCTCTCTTCTTCTTCTTCTTCT 60.047 44.000 0.00 0.00 0.00 2.85
508 569 6.454795 TGCTCTCTTCTTCTTCTTCTTCTTC 58.545 40.000 0.00 0.00 0.00 2.87
509 570 6.267471 TGCTCTCTTCTTCTTCTTCTTCTTCT 59.733 38.462 0.00 0.00 0.00 2.85
510 571 7.154656 GCTCTCTTCTTCTTCTTCTTCTTCTT 58.845 38.462 0.00 0.00 0.00 2.52
511 572 7.329471 GCTCTCTTCTTCTTCTTCTTCTTCTTC 59.671 40.741 0.00 0.00 0.00 2.87
512 573 8.477419 TCTCTTCTTCTTCTTCTTCTTCTTCT 57.523 34.615 0.00 0.00 0.00 2.85
513 574 8.923270 TCTCTTCTTCTTCTTCTTCTTCTTCTT 58.077 33.333 0.00 0.00 0.00 2.52
514 575 9.196552 CTCTTCTTCTTCTTCTTCTTCTTCTTC 57.803 37.037 0.00 0.00 0.00 2.87
516 577 8.885494 TTCTTCTTCTTCTTCTTCTTCTTCTG 57.115 34.615 0.00 0.00 0.00 3.02
518 579 6.418057 TCTTCTTCTTCTTCTTCTTCTGCT 57.582 37.500 0.00 0.00 0.00 4.24
519 580 7.531857 TCTTCTTCTTCTTCTTCTTCTGCTA 57.468 36.000 0.00 0.00 0.00 3.49
520 581 8.133024 TCTTCTTCTTCTTCTTCTTCTGCTAT 57.867 34.615 0.00 0.00 0.00 2.97
522 583 9.218440 CTTCTTCTTCTTCTTCTTCTGCTATTT 57.782 33.333 0.00 0.00 0.00 1.40
524 585 9.213799 TCTTCTTCTTCTTCTTCTGCTATTTTC 57.786 33.333 0.00 0.00 0.00 2.29
575 678 9.516314 GATGCATACATACATACATACATACGT 57.484 33.333 0.00 0.00 36.35 3.57
577 680 8.736244 TGCATACATACATACATACATACGTCT 58.264 33.333 0.00 0.00 0.00 4.18
578 681 9.010366 GCATACATACATACATACATACGTCTG 57.990 37.037 0.00 0.00 0.00 3.51
581 684 8.392372 ACATACATACATACATACGTCTGACT 57.608 34.615 8.06 0.00 0.00 3.41
582 685 9.498176 ACATACATACATACATACGTCTGACTA 57.502 33.333 8.06 0.00 0.00 2.59
586 689 9.894783 ACATACATACATACGTCTGACTATTTC 57.105 33.333 8.06 0.00 0.00 2.17
587 690 9.343103 CATACATACATACGTCTGACTATTTCC 57.657 37.037 8.06 0.00 0.00 3.13
588 691 7.584122 ACATACATACGTCTGACTATTTCCT 57.416 36.000 8.06 0.00 0.00 3.36
599 702 5.060662 TGACTATTTCCTTGTCTGTCTCG 57.939 43.478 0.00 0.00 31.75 4.04
605 708 2.155279 TCCTTGTCTGTCTCGACTCTG 58.845 52.381 0.00 0.00 35.00 3.35
609 712 3.127425 TGTCTGTCTCGACTCTGAAGA 57.873 47.619 0.00 0.00 35.00 2.87
617 720 4.737765 GTCTCGACTCTGAAGAATGCATAC 59.262 45.833 0.00 0.00 0.00 2.39
618 721 4.642437 TCTCGACTCTGAAGAATGCATACT 59.358 41.667 0.00 0.00 0.00 2.12
620 723 6.318900 TCTCGACTCTGAAGAATGCATACTTA 59.681 38.462 0.00 0.00 0.00 2.24
622 725 7.142021 TCGACTCTGAAGAATGCATACTTATC 58.858 38.462 0.00 0.00 0.00 1.75
623 726 6.364706 CGACTCTGAAGAATGCATACTTATCC 59.635 42.308 0.00 0.00 0.00 2.59
625 728 6.328672 ACTCTGAAGAATGCATACTTATCCCT 59.671 38.462 0.00 0.00 0.00 4.20
626 729 7.141758 TCTGAAGAATGCATACTTATCCCTT 57.858 36.000 0.00 0.00 0.00 3.95
627 730 7.577303 TCTGAAGAATGCATACTTATCCCTTT 58.423 34.615 0.00 0.00 0.00 3.11
628 731 7.716998 TCTGAAGAATGCATACTTATCCCTTTC 59.283 37.037 0.00 0.00 0.00 2.62
629 732 7.345691 TGAAGAATGCATACTTATCCCTTTCA 58.654 34.615 0.00 0.00 0.00 2.69
630 733 8.000709 TGAAGAATGCATACTTATCCCTTTCAT 58.999 33.333 0.00 0.00 0.00 2.57
631 734 9.507329 GAAGAATGCATACTTATCCCTTTCATA 57.493 33.333 0.00 0.00 0.00 2.15
697 800 6.153510 TCCTCATACATACAGATACAGGATGC 59.846 42.308 0.00 0.00 42.53 3.91
705 811 1.068281 AGATACAGGATGCTGCTCACG 59.932 52.381 14.95 0.00 42.53 4.35
754 860 1.251251 ATGTGCTTTCTTCAGTGGGC 58.749 50.000 0.00 0.00 0.00 5.36
769 887 0.038166 TGGGCCTCCTCATGTTCAAC 59.962 55.000 4.53 0.00 0.00 3.18
795 913 4.963276 TTAATTTCAGCATTCGACCTGG 57.037 40.909 6.97 0.00 0.00 4.45
811 931 2.841988 GGTTGCCACCCAAGCCAA 60.842 61.111 0.00 0.00 44.19 4.52
813 933 3.233231 TTGCCACCCAAGCCAAGC 61.233 61.111 0.00 0.00 0.00 4.01
816 936 2.677875 CCACCCAAGCCAAGCCTC 60.678 66.667 0.00 0.00 0.00 4.70
817 937 3.058160 CACCCAAGCCAAGCCTCG 61.058 66.667 0.00 0.00 0.00 4.63
819 939 4.729918 CCCAAGCCAAGCCTCGCT 62.730 66.667 0.00 0.00 42.56 4.93
826 946 1.871772 CCAAGCCTCGCTTCACTTG 59.128 57.895 0.00 0.00 46.77 3.16
856 976 1.153667 CCCTGCTTCGACTCTGCTC 60.154 63.158 0.00 0.00 0.00 4.26
862 982 2.802816 TGCTTCGACTCTGCTCTTTTTC 59.197 45.455 0.00 0.00 0.00 2.29
868 988 6.049263 TCGACTCTGCTCTTTTTCTTTTTC 57.951 37.500 0.00 0.00 0.00 2.29
876 996 9.305925 TCTGCTCTTTTTCTTTTTCTTTTCATC 57.694 29.630 0.00 0.00 0.00 2.92
910 1033 8.934507 TTTAAGCTAAGCTAAGATTCTGAGTC 57.065 34.615 0.00 0.00 38.25 3.36
911 1034 6.790232 AAGCTAAGCTAAGATTCTGAGTCT 57.210 37.500 0.00 0.00 38.25 3.24
912 1035 6.790232 AGCTAAGCTAAGATTCTGAGTCTT 57.210 37.500 17.77 17.77 36.99 3.01
913 1036 7.889873 AGCTAAGCTAAGATTCTGAGTCTTA 57.110 36.000 18.06 18.06 36.99 2.10
1089 1212 1.378250 CAAGAGGAAGCTGCTGGGG 60.378 63.158 1.35 0.00 0.00 4.96
1276 1409 4.887748 ACATGTGAGTGACTGTCCTAAAG 58.112 43.478 5.17 0.00 0.00 1.85
1277 1410 4.588951 ACATGTGAGTGACTGTCCTAAAGA 59.411 41.667 5.17 0.00 0.00 2.52
1301 1438 4.571176 GTCTTCTGACCGTTTGTTTCTTCT 59.429 41.667 0.00 0.00 37.24 2.85
1389 1526 3.679389 CAGAAAGTACTCTGTTGGGCAT 58.321 45.455 0.00 0.00 38.43 4.40
1498 1635 0.765510 GAGGACCCTGGTGTTTCACT 59.234 55.000 0.00 0.00 34.40 3.41
1597 1734 2.906354 CTGGTGTTAGACTGGTATGCC 58.094 52.381 0.00 0.00 0.00 4.40
1598 1735 2.236146 CTGGTGTTAGACTGGTATGCCA 59.764 50.000 1.39 1.39 43.73 4.92
1602 1748 4.335594 GGTGTTAGACTGGTATGCCATTTC 59.664 45.833 1.83 3.18 45.05 2.17
1664 1810 6.688073 TGAAATGGGTTCTTTCTCTACTCT 57.312 37.500 0.00 0.00 37.13 3.24
1665 1811 7.792364 TGAAATGGGTTCTTTCTCTACTCTA 57.208 36.000 0.00 0.00 37.13 2.43
1747 1893 6.400091 GCTCAACACGTGTCTCAACTATTTAG 60.400 42.308 23.61 4.91 0.00 1.85
1836 1985 5.579511 AGAATAATACACGTGCCACTAACAC 59.420 40.000 17.22 0.14 34.62 3.32
1842 1991 1.871039 ACGTGCCACTAACACACATTC 59.129 47.619 0.00 0.00 37.93 2.67
1969 2136 4.574674 AGGGCTGTGTCATAATCAAAGA 57.425 40.909 0.00 0.00 0.00 2.52
1970 2137 4.922206 AGGGCTGTGTCATAATCAAAGAA 58.078 39.130 0.00 0.00 0.00 2.52
1971 2138 5.324409 AGGGCTGTGTCATAATCAAAGAAA 58.676 37.500 0.00 0.00 0.00 2.52
1972 2139 5.416952 AGGGCTGTGTCATAATCAAAGAAAG 59.583 40.000 0.00 0.00 0.00 2.62
1989 2156 5.990120 AGAAAGAATTGCAGCAATTACCT 57.010 34.783 29.39 21.06 43.05 3.08
1992 2159 5.582689 AAGAATTGCAGCAATTACCTACC 57.417 39.130 29.39 17.44 43.05 3.18
2006 2173 6.964876 ATTACCTACCCCTTAAACTGAAGT 57.035 37.500 0.00 0.00 0.00 3.01
2023 2198 7.981102 ACTGAAGTAGTTTATTCTTCAACCC 57.019 36.000 7.94 0.00 44.10 4.11
2027 2202 7.878127 TGAAGTAGTTTATTCTTCAACCCAGAG 59.122 37.037 4.68 0.00 42.61 3.35
2028 2203 6.712276 AGTAGTTTATTCTTCAACCCAGAGG 58.288 40.000 0.00 0.00 40.04 3.69
2049 2238 3.368236 GGTAGCACTGACGTGATCTTTTC 59.632 47.826 0.00 0.00 43.97 2.29
2051 2240 1.126846 GCACTGACGTGATCTTTTCCG 59.873 52.381 0.00 0.00 43.97 4.30
2052 2241 2.404215 CACTGACGTGATCTTTTCCGT 58.596 47.619 0.00 0.00 43.97 4.69
2082 2271 9.549509 TTATTACTAGCAAAATGTTTGTTAGCG 57.450 29.630 18.70 4.32 36.91 4.26
2089 2278 2.989422 ATGTTTGTTAGCGCCACTTC 57.011 45.000 2.29 0.00 0.00 3.01
2093 2282 1.705256 TTGTTAGCGCCACTTCTACG 58.295 50.000 2.29 0.00 0.00 3.51
2123 2313 7.448469 AGCAGTATGTTGATTCTTGTTTACCTT 59.552 33.333 0.00 0.00 39.31 3.50
2217 2413 0.960364 TGGCGCTCCATTTGAGGAAC 60.960 55.000 7.64 0.00 41.73 3.62
2273 2472 0.254747 CCTGTTTATCCCCTTCCGCA 59.745 55.000 0.00 0.00 0.00 5.69
2322 2521 2.652530 CAAGCCATGGTGGTGTGC 59.347 61.111 14.67 0.00 40.46 4.57
2358 2557 0.672401 GCAACTGGCTGGCGTTAGTA 60.672 55.000 10.05 0.00 40.25 1.82
2388 2591 1.899814 GGGTTTCCCTTAGCCTTTTGG 59.100 52.381 0.00 0.00 41.34 3.28
2438 2647 1.610673 TCCTGACAGGGCCTCTCAC 60.611 63.158 21.56 0.00 35.59 3.51
2560 2769 2.838736 TCTTTCTGTGTCTTGCTGTCC 58.161 47.619 0.00 0.00 0.00 4.02
2565 2774 2.666190 TGTCTTGCTGTCCGCTGC 60.666 61.111 0.00 0.00 40.11 5.25
2571 2780 3.437795 GCTGTCCGCTGCATGCTT 61.438 61.111 20.33 0.00 40.11 3.91
2574 2783 0.585357 CTGTCCGCTGCATGCTTATC 59.415 55.000 20.33 4.23 40.11 1.75
2575 2784 0.815213 TGTCCGCTGCATGCTTATCC 60.815 55.000 20.33 3.20 40.11 2.59
2576 2785 0.815213 GTCCGCTGCATGCTTATCCA 60.815 55.000 20.33 0.00 40.11 3.41
2668 2895 0.038526 ACGACCGCTAACCAAGACAG 60.039 55.000 0.00 0.00 0.00 3.51
2747 2974 0.392193 CCTCACTGGTTAGCAGCCTG 60.392 60.000 11.64 3.59 0.00 4.85
2858 3085 4.544047 TCACAGTGCCGTGCTGCA 62.544 61.111 0.00 0.00 39.37 4.41
3193 3435 1.946984 TGGGTAGGTTCTTCATCGGT 58.053 50.000 0.00 0.00 0.00 4.69
3217 3459 2.892425 CGGTGAAGGATCCGCAGC 60.892 66.667 22.27 22.27 40.28 5.25
3259 3506 4.422840 CGATGATGATGAGGCTGATAGAC 58.577 47.826 0.00 0.00 0.00 2.59
3268 3518 2.038295 GAGGCTGATAGACATGGAAGGG 59.962 54.545 0.00 0.00 0.00 3.95
3310 3565 1.694525 CCCTTTCCCTCCCTCCCTC 60.695 68.421 0.00 0.00 0.00 4.30
3311 3566 1.694525 CCTTTCCCTCCCTCCCTCC 60.695 68.421 0.00 0.00 0.00 4.30
3312 3567 1.694525 CTTTCCCTCCCTCCCTCCC 60.695 68.421 0.00 0.00 0.00 4.30
3313 3568 2.191846 TTTCCCTCCCTCCCTCCCT 61.192 63.158 0.00 0.00 0.00 4.20
3380 3640 0.324645 GGTTGGTTGGCTGGATGGAT 60.325 55.000 0.00 0.00 0.00 3.41
3381 3641 0.819582 GTTGGTTGGCTGGATGGATG 59.180 55.000 0.00 0.00 0.00 3.51
3382 3642 0.324552 TTGGTTGGCTGGATGGATGG 60.325 55.000 0.00 0.00 0.00 3.51
3383 3643 1.213619 TGGTTGGCTGGATGGATGGA 61.214 55.000 0.00 0.00 0.00 3.41
3384 3644 0.466922 GGTTGGCTGGATGGATGGAG 60.467 60.000 0.00 0.00 0.00 3.86
3592 3871 6.601613 TGGTTGACTCTTGACTGTTTAATTGT 59.398 34.615 0.00 0.00 0.00 2.71
3593 3872 7.132863 GGTTGACTCTTGACTGTTTAATTGTC 58.867 38.462 0.00 0.00 0.00 3.18
3594 3873 7.012421 GGTTGACTCTTGACTGTTTAATTGTCT 59.988 37.037 0.00 0.00 0.00 3.41
3704 4025 2.118228 GCAAATCTGCGTTGTGTTGA 57.882 45.000 0.00 0.00 39.20 3.18
3705 4026 2.664916 GCAAATCTGCGTTGTGTTGAT 58.335 42.857 0.00 0.00 39.20 2.57
3711 4032 2.421775 TCTGCGTTGTGTTGATGTTGTT 59.578 40.909 0.00 0.00 0.00 2.83
3744 4072 5.174395 TGGTTCATTCAGTTTGTTTGTTGG 58.826 37.500 0.00 0.00 0.00 3.77
3854 4186 4.362470 TGGATGGATGATTAGGCAAGAG 57.638 45.455 0.00 0.00 0.00 2.85
3891 4227 6.761731 TTGTTTGTTTGTTTGTTGACTCAG 57.238 33.333 0.00 0.00 0.00 3.35
3894 4230 6.016192 TGTTTGTTTGTTTGTTGACTCAGGTA 60.016 34.615 0.00 0.00 0.00 3.08
3895 4231 5.554822 TGTTTGTTTGTTGACTCAGGTAC 57.445 39.130 0.00 0.00 0.00 3.34
3897 4233 5.353123 TGTTTGTTTGTTGACTCAGGTACTC 59.647 40.000 0.00 0.00 34.60 2.59
3898 4234 4.067972 TGTTTGTTGACTCAGGTACTCC 57.932 45.455 0.00 0.00 34.60 3.85
3899 4235 3.181458 TGTTTGTTGACTCAGGTACTCCC 60.181 47.826 0.00 0.00 34.60 4.30
3901 4237 2.526432 TGTTGACTCAGGTACTCCCTC 58.474 52.381 0.00 0.00 43.86 4.30
3902 4238 1.826096 GTTGACTCAGGTACTCCCTCC 59.174 57.143 0.00 0.00 43.86 4.30
3903 4239 0.034380 TGACTCAGGTACTCCCTCCG 60.034 60.000 0.00 0.00 43.86 4.63
3904 4240 0.034283 GACTCAGGTACTCCCTCCGT 60.034 60.000 0.00 0.00 43.86 4.69
3905 4241 0.408700 ACTCAGGTACTCCCTCCGTT 59.591 55.000 0.00 0.00 43.86 4.44
3906 4242 1.104630 CTCAGGTACTCCCTCCGTTC 58.895 60.000 0.00 0.00 43.86 3.95
3907 4243 0.702902 TCAGGTACTCCCTCCGTTCT 59.297 55.000 0.00 0.00 43.86 3.01
3908 4244 1.918262 TCAGGTACTCCCTCCGTTCTA 59.082 52.381 0.00 0.00 43.86 2.10
3909 4245 2.309755 TCAGGTACTCCCTCCGTTCTAA 59.690 50.000 0.00 0.00 43.86 2.10
3910 4246 3.094572 CAGGTACTCCCTCCGTTCTAAA 58.905 50.000 0.00 0.00 43.86 1.85
3911 4247 3.512724 CAGGTACTCCCTCCGTTCTAAAA 59.487 47.826 0.00 0.00 43.86 1.52
3912 4248 4.161754 CAGGTACTCCCTCCGTTCTAAAAT 59.838 45.833 0.00 0.00 43.86 1.82
3913 4249 5.361857 CAGGTACTCCCTCCGTTCTAAAATA 59.638 44.000 0.00 0.00 43.86 1.40
3914 4250 5.597594 AGGTACTCCCTCCGTTCTAAAATAG 59.402 44.000 0.00 0.00 40.71 1.73
3915 4251 5.595952 GGTACTCCCTCCGTTCTAAAATAGA 59.404 44.000 0.00 0.00 0.00 1.98
3916 4252 6.267242 GGTACTCCCTCCGTTCTAAAATAGAT 59.733 42.308 0.00 0.00 34.22 1.98
3917 4253 6.163135 ACTCCCTCCGTTCTAAAATAGATG 57.837 41.667 0.00 0.00 34.22 2.90
3918 4254 5.897824 ACTCCCTCCGTTCTAAAATAGATGA 59.102 40.000 0.00 0.00 34.22 2.92
3919 4255 6.158023 TCCCTCCGTTCTAAAATAGATGAC 57.842 41.667 0.00 0.00 34.22 3.06
3920 4256 5.070047 TCCCTCCGTTCTAAAATAGATGACC 59.930 44.000 0.00 0.00 34.22 4.02
3921 4257 5.298347 CCTCCGTTCTAAAATAGATGACCC 58.702 45.833 0.00 0.00 34.22 4.46
3922 4258 5.163343 CCTCCGTTCTAAAATAGATGACCCA 60.163 44.000 0.00 0.00 34.22 4.51
3923 4259 6.302535 TCCGTTCTAAAATAGATGACCCAA 57.697 37.500 0.00 0.00 34.22 4.12
3924 4260 6.110707 TCCGTTCTAAAATAGATGACCCAAC 58.889 40.000 0.00 0.00 34.22 3.77
3925 4261 6.070424 TCCGTTCTAAAATAGATGACCCAACT 60.070 38.462 0.00 0.00 34.22 3.16
3926 4262 6.598064 CCGTTCTAAAATAGATGACCCAACTT 59.402 38.462 0.00 0.00 34.22 2.66
3927 4263 7.120726 CCGTTCTAAAATAGATGACCCAACTTT 59.879 37.037 0.00 0.00 34.22 2.66
3928 4264 9.158233 CGTTCTAAAATAGATGACCCAACTTTA 57.842 33.333 0.00 0.00 34.22 1.85
3976 4312 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
3977 4313 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
3978 4314 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
3979 4315 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
3980 4316 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
3981 4317 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
3982 4318 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
3983 4319 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
3984 4320 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
3985 4321 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
3986 4322 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
3991 4327 2.019807 TTTGGAACGGAGGGAGTAGT 57.980 50.000 0.00 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 34 2.040359 GAAGAGAGGGGGAGGGGG 60.040 72.222 0.00 0.00 0.00 5.40
36 39 1.595058 GGAGGAGGAAGAGAGGGGGA 61.595 65.000 0.00 0.00 0.00 4.81
38 41 0.043334 TTGGAGGAGGAAGAGAGGGG 59.957 60.000 0.00 0.00 0.00 4.79
46 57 1.827792 TCTTTGGGTTGGAGGAGGAA 58.172 50.000 0.00 0.00 0.00 3.36
61 72 2.459934 CGCCGCTGTTTTCTTTTCTTT 58.540 42.857 0.00 0.00 0.00 2.52
62 73 1.864029 GCGCCGCTGTTTTCTTTTCTT 60.864 47.619 0.00 0.00 0.00 2.52
63 74 0.317854 GCGCCGCTGTTTTCTTTTCT 60.318 50.000 0.00 0.00 0.00 2.52
64 75 1.596841 CGCGCCGCTGTTTTCTTTTC 61.597 55.000 7.78 0.00 0.00 2.29
65 76 1.657181 CGCGCCGCTGTTTTCTTTT 60.657 52.632 7.78 0.00 0.00 2.27
100 111 4.468689 CGGAGGAGGGGAAACGGC 62.469 72.222 0.00 0.00 0.00 5.68
118 136 1.226746 GAGGTAGTGTGTGTGTTGGC 58.773 55.000 0.00 0.00 0.00 4.52
122 140 1.366366 GCGGAGGTAGTGTGTGTGT 59.634 57.895 0.00 0.00 0.00 3.72
128 146 4.065281 GCACGGCGGAGGTAGTGT 62.065 66.667 13.24 0.00 36.99 3.55
129 147 4.814294 GGCACGGCGGAGGTAGTG 62.814 72.222 13.24 0.00 37.63 2.74
179 203 1.096416 GAGGGAGCGGATAGATACGG 58.904 60.000 0.00 0.00 33.88 4.02
186 210 0.681887 TGTTGTCGAGGGAGCGGATA 60.682 55.000 0.00 0.00 0.00 2.59
187 211 1.949847 CTGTTGTCGAGGGAGCGGAT 61.950 60.000 0.00 0.00 0.00 4.18
188 212 2.599281 TGTTGTCGAGGGAGCGGA 60.599 61.111 0.00 0.00 0.00 5.54
189 213 2.125912 CTGTTGTCGAGGGAGCGG 60.126 66.667 0.00 0.00 0.00 5.52
239 290 3.374058 GTCGAACCAAGAGAGAGAGAGAG 59.626 52.174 0.00 0.00 0.00 3.20
240 291 3.008594 AGTCGAACCAAGAGAGAGAGAGA 59.991 47.826 0.00 0.00 0.00 3.10
241 292 3.343617 AGTCGAACCAAGAGAGAGAGAG 58.656 50.000 0.00 0.00 0.00 3.20
244 295 2.077627 CGAGTCGAACCAAGAGAGAGA 58.922 52.381 6.73 0.00 0.00 3.10
245 296 2.077627 TCGAGTCGAACCAAGAGAGAG 58.922 52.381 13.98 0.00 31.06 3.20
248 299 0.879765 GGTCGAGTCGAACCAAGAGA 59.120 55.000 20.05 0.00 37.65 3.10
250 301 2.082231 CTAGGTCGAGTCGAACCAAGA 58.918 52.381 26.37 9.19 45.54 3.02
253 304 2.414994 ATCTAGGTCGAGTCGAACCA 57.585 50.000 26.37 13.05 45.54 3.67
255 306 6.389091 TCTATCTATCTAGGTCGAGTCGAAC 58.611 44.000 23.01 23.01 44.66 3.95
257 308 6.778834 ATCTATCTATCTAGGTCGAGTCGA 57.221 41.667 12.09 12.09 0.00 4.20
258 309 7.933396 TCTATCTATCTATCTAGGTCGAGTCG 58.067 42.308 6.09 6.09 0.00 4.18
281 332 9.213777 AGACGGAGAGATCTATCTATCTAATCT 57.786 37.037 16.55 10.44 42.99 2.40
282 333 9.477484 GAGACGGAGAGATCTATCTATCTAATC 57.523 40.741 16.55 8.85 42.99 1.75
283 334 8.988060 TGAGACGGAGAGATCTATCTATCTAAT 58.012 37.037 16.55 0.56 42.99 1.73
284 335 8.368962 TGAGACGGAGAGATCTATCTATCTAA 57.631 38.462 16.55 10.01 42.99 2.10
285 336 7.964666 TGAGACGGAGAGATCTATCTATCTA 57.035 40.000 16.55 6.81 42.99 1.98
286 337 6.867519 TGAGACGGAGAGATCTATCTATCT 57.132 41.667 16.55 17.43 42.99 1.98
291 342 4.458989 AGCATTGAGACGGAGAGATCTATC 59.541 45.833 8.93 8.93 0.00 2.08
293 344 3.818210 GAGCATTGAGACGGAGAGATCTA 59.182 47.826 0.00 0.00 0.00 1.98
303 354 2.716504 CGTAGAATCGAGCATTGAGACG 59.283 50.000 0.00 0.00 0.00 4.18
327 378 8.547894 CGACATTCATTCCTTTGATAACGAATA 58.452 33.333 0.00 0.00 0.00 1.75
328 379 7.279981 TCGACATTCATTCCTTTGATAACGAAT 59.720 33.333 0.00 0.00 0.00 3.34
329 380 6.592220 TCGACATTCATTCCTTTGATAACGAA 59.408 34.615 0.00 0.00 0.00 3.85
330 381 6.103330 TCGACATTCATTCCTTTGATAACGA 58.897 36.000 0.00 0.00 0.00 3.85
331 382 6.344572 TCGACATTCATTCCTTTGATAACG 57.655 37.500 0.00 0.00 0.00 3.18
332 383 7.355778 GGATCGACATTCATTCCTTTGATAAC 58.644 38.462 0.00 0.00 0.00 1.89
340 391 3.244700 GGATGGGATCGACATTCATTCCT 60.245 47.826 3.42 0.00 0.00 3.36
350 401 0.322975 CCAGATGGGATGGGATCGAC 59.677 60.000 0.00 0.00 40.01 4.20
351 402 0.190815 TCCAGATGGGATGGGATCGA 59.809 55.000 0.00 0.00 42.15 3.59
368 423 9.790389 CAGATAGATGGTAAATAATACGACTCC 57.210 37.037 0.00 0.00 0.00 3.85
386 447 9.448438 GACAGACAGATACAGATACAGATAGAT 57.552 37.037 0.00 0.00 0.00 1.98
391 452 6.418946 ACAGACAGACAGATACAGATACAGA 58.581 40.000 0.00 0.00 0.00 3.41
392 453 6.691754 ACAGACAGACAGATACAGATACAG 57.308 41.667 0.00 0.00 0.00 2.74
393 454 8.753497 AATACAGACAGACAGATACAGATACA 57.247 34.615 0.00 0.00 0.00 2.29
414 475 9.827411 GGACTGAATTTTGTTCAGAGTAAATAC 57.173 33.333 20.89 0.00 46.57 1.89
425 486 3.347958 TGTGCGGACTGAATTTTGTTC 57.652 42.857 8.99 0.00 0.00 3.18
459 520 9.383519 CAGGTGATGTAAACAAATAGTATGAGT 57.616 33.333 0.00 0.00 0.00 3.41
460 521 8.338259 GCAGGTGATGTAAACAAATAGTATGAG 58.662 37.037 0.00 0.00 0.00 2.90
461 522 8.046708 AGCAGGTGATGTAAACAAATAGTATGA 58.953 33.333 0.00 0.00 0.00 2.15
462 523 8.213518 AGCAGGTGATGTAAACAAATAGTATG 57.786 34.615 0.00 0.00 0.00 2.39
463 524 8.267894 AGAGCAGGTGATGTAAACAAATAGTAT 58.732 33.333 0.00 0.00 0.00 2.12
464 525 7.620880 AGAGCAGGTGATGTAAACAAATAGTA 58.379 34.615 0.00 0.00 0.00 1.82
466 527 6.820656 AGAGAGCAGGTGATGTAAACAAATAG 59.179 38.462 0.00 0.00 0.00 1.73
469 530 4.973168 AGAGAGCAGGTGATGTAAACAAA 58.027 39.130 0.00 0.00 0.00 2.83
470 531 4.623932 AGAGAGCAGGTGATGTAAACAA 57.376 40.909 0.00 0.00 0.00 2.83
472 533 4.826556 AGAAGAGAGCAGGTGATGTAAAC 58.173 43.478 0.00 0.00 0.00 2.01
473 534 5.247110 AGAAGAAGAGAGCAGGTGATGTAAA 59.753 40.000 0.00 0.00 0.00 2.01
474 535 4.774726 AGAAGAAGAGAGCAGGTGATGTAA 59.225 41.667 0.00 0.00 0.00 2.41
480 541 3.959535 AGAAGAAGAAGAGAGCAGGTG 57.040 47.619 0.00 0.00 0.00 4.00
481 542 4.159557 AGAAGAAGAAGAAGAGAGCAGGT 58.840 43.478 0.00 0.00 0.00 4.00
482 543 4.806640 AGAAGAAGAAGAAGAGAGCAGG 57.193 45.455 0.00 0.00 0.00 4.85
483 544 6.029346 AGAAGAAGAAGAAGAAGAGAGCAG 57.971 41.667 0.00 0.00 0.00 4.24
484 545 6.267471 AGAAGAAGAAGAAGAAGAAGAGAGCA 59.733 38.462 0.00 0.00 0.00 4.26
486 547 8.579863 AGAAGAAGAAGAAGAAGAAGAAGAGAG 58.420 37.037 0.00 0.00 0.00 3.20
488 549 9.196552 GAAGAAGAAGAAGAAGAAGAAGAAGAG 57.803 37.037 0.00 0.00 0.00 2.85
489 550 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
490 551 8.981647 CAGAAGAAGAAGAAGAAGAAGAAGAAG 58.018 37.037 0.00 0.00 0.00 2.85
492 553 6.928492 GCAGAAGAAGAAGAAGAAGAAGAAGA 59.072 38.462 0.00 0.00 0.00 2.87
494 555 6.825610 AGCAGAAGAAGAAGAAGAAGAAGAA 58.174 36.000 0.00 0.00 0.00 2.52
496 557 8.776376 AATAGCAGAAGAAGAAGAAGAAGAAG 57.224 34.615 0.00 0.00 0.00 2.85
497 558 9.566432 AAAATAGCAGAAGAAGAAGAAGAAGAA 57.434 29.630 0.00 0.00 0.00 2.52
498 559 9.213799 GAAAATAGCAGAAGAAGAAGAAGAAGA 57.786 33.333 0.00 0.00 0.00 2.87
499 560 9.218440 AGAAAATAGCAGAAGAAGAAGAAGAAG 57.782 33.333 0.00 0.00 0.00 2.85
500 561 9.566432 AAGAAAATAGCAGAAGAAGAAGAAGAA 57.434 29.630 0.00 0.00 0.00 2.52
501 562 9.566432 AAAGAAAATAGCAGAAGAAGAAGAAGA 57.434 29.630 0.00 0.00 0.00 2.87
502 563 9.824534 GAAAGAAAATAGCAGAAGAAGAAGAAG 57.175 33.333 0.00 0.00 0.00 2.85
504 565 9.566432 AAGAAAGAAAATAGCAGAAGAAGAAGA 57.434 29.630 0.00 0.00 0.00 2.87
506 567 9.125026 ACAAGAAAGAAAATAGCAGAAGAAGAA 57.875 29.630 0.00 0.00 0.00 2.52
575 678 5.106118 CGAGACAGACAAGGAAATAGTCAGA 60.106 44.000 0.00 0.00 34.80 3.27
577 680 4.765339 TCGAGACAGACAAGGAAATAGTCA 59.235 41.667 0.00 0.00 34.80 3.41
578 681 5.096849 GTCGAGACAGACAAGGAAATAGTC 58.903 45.833 0.00 0.00 40.65 2.59
579 682 4.767928 AGTCGAGACAGACAAGGAAATAGT 59.232 41.667 5.99 0.00 43.24 2.12
581 684 5.010933 AGAGTCGAGACAGACAAGGAAATA 58.989 41.667 5.99 0.00 43.24 1.40
582 685 3.829601 AGAGTCGAGACAGACAAGGAAAT 59.170 43.478 5.99 0.00 43.24 2.17
583 686 3.004839 CAGAGTCGAGACAGACAAGGAAA 59.995 47.826 5.99 0.00 43.24 3.13
584 687 2.554462 CAGAGTCGAGACAGACAAGGAA 59.446 50.000 5.99 0.00 43.24 3.36
585 688 2.155279 CAGAGTCGAGACAGACAAGGA 58.845 52.381 5.99 0.00 43.24 3.36
586 689 2.155279 TCAGAGTCGAGACAGACAAGG 58.845 52.381 5.99 0.00 43.24 3.61
587 690 3.500299 TCTTCAGAGTCGAGACAGACAAG 59.500 47.826 5.99 3.10 43.24 3.16
588 691 3.477530 TCTTCAGAGTCGAGACAGACAA 58.522 45.455 5.99 0.00 43.24 3.18
599 702 6.648725 GGGATAAGTATGCATTCTTCAGAGTC 59.351 42.308 20.31 12.08 0.00 3.36
605 708 7.807977 TGAAAGGGATAAGTATGCATTCTTC 57.192 36.000 20.31 8.83 28.07 2.87
668 771 8.421784 TCCTGTATCTGTATGTATGAGGAAAAC 58.578 37.037 0.00 0.00 0.00 2.43
697 800 1.991264 CATCAGAAGACACGTGAGCAG 59.009 52.381 25.01 6.84 0.00 4.24
705 811 2.221169 TGTTGTGGCATCAGAAGACAC 58.779 47.619 4.55 4.55 0.00 3.67
769 887 7.592533 CCAGGTCGAATGCTGAAATTAATATTG 59.407 37.037 0.00 0.00 0.00 1.90
795 913 2.736531 CTTGGCTTGGGTGGCAAC 59.263 61.111 0.00 0.00 45.43 4.17
811 931 0.603975 GGAACAAGTGAAGCGAGGCT 60.604 55.000 0.00 0.00 42.56 4.58
813 933 3.305709 TGGAACAAGTGAAGCGAGG 57.694 52.632 0.00 0.00 31.92 4.63
826 946 0.251787 AAGCAGGGGTGGATTGGAAC 60.252 55.000 0.00 0.00 0.00 3.62
910 1033 7.741027 AGTGTAATGAGATGGATGCAATAAG 57.259 36.000 0.00 0.00 0.00 1.73
911 1034 7.388776 GCTAGTGTAATGAGATGGATGCAATAA 59.611 37.037 0.00 0.00 0.00 1.40
912 1035 6.875726 GCTAGTGTAATGAGATGGATGCAATA 59.124 38.462 0.00 0.00 0.00 1.90
913 1036 5.704515 GCTAGTGTAATGAGATGGATGCAAT 59.295 40.000 0.00 0.00 0.00 3.56
1276 1409 4.120589 AGAAACAAACGGTCAGAAGACTC 58.879 43.478 0.00 0.00 44.36 3.36
1277 1410 4.138487 AGAAACAAACGGTCAGAAGACT 57.862 40.909 0.00 0.00 44.36 3.24
1301 1438 2.991190 GACGATTTCGCTGAACCAAGTA 59.009 45.455 0.00 0.00 44.43 2.24
1389 1526 2.161855 TCGGTTGAACGGTTAGCTCTA 58.838 47.619 0.00 0.00 0.00 2.43
1661 1807 2.161012 TCGCTGGACGTGTAGTTTAGAG 59.839 50.000 0.00 0.00 44.19 2.43
1662 1808 2.095567 GTCGCTGGACGTGTAGTTTAGA 60.096 50.000 0.00 0.00 44.19 2.10
1663 1809 2.248487 GTCGCTGGACGTGTAGTTTAG 58.752 52.381 0.00 0.00 44.19 1.85
1664 1810 1.608109 TGTCGCTGGACGTGTAGTTTA 59.392 47.619 0.00 0.00 46.49 2.01
1665 1811 0.386476 TGTCGCTGGACGTGTAGTTT 59.614 50.000 0.00 0.00 46.49 2.66
1747 1893 2.135933 AGCTTGCGTCTTACTCAACAC 58.864 47.619 0.00 0.00 0.00 3.32
1800 1947 9.825391 CACGTGTATTATTCTAATTGACGTTAC 57.175 33.333 7.58 0.00 35.50 2.50
1836 1985 6.401047 AGGATATTTGGAGCATTGAATGTG 57.599 37.500 7.05 0.00 0.00 3.21
1842 1991 7.820872 AGAAACAAAAGGATATTTGGAGCATTG 59.179 33.333 4.96 0.00 43.10 2.82
1969 2136 5.105351 GGGTAGGTAATTGCTGCAATTCTTT 60.105 40.000 35.84 25.06 42.19 2.52
1970 2137 4.402474 GGGTAGGTAATTGCTGCAATTCTT 59.598 41.667 35.84 25.68 42.19 2.52
1971 2138 3.954258 GGGTAGGTAATTGCTGCAATTCT 59.046 43.478 35.84 29.20 42.19 2.40
1972 2139 3.068165 GGGGTAGGTAATTGCTGCAATTC 59.932 47.826 35.84 26.76 42.19 2.17
2006 2173 6.697641 ACCTCTGGGTTGAAGAATAAACTA 57.302 37.500 0.00 0.00 44.73 2.24
2023 2198 3.408389 CACGTCAGTGCTACCTCTG 57.592 57.895 0.00 0.00 41.94 3.35
2038 2216 7.515643 AGTAATAACAAACGGAAAAGATCACG 58.484 34.615 0.00 0.00 0.00 4.35
2049 2238 8.736751 AACATTTTGCTAGTAATAACAAACGG 57.263 30.769 0.00 0.00 32.12 4.44
2082 2271 1.639298 CTGCTTGGCGTAGAAGTGGC 61.639 60.000 0.00 0.00 0.00 5.01
2089 2278 2.616960 TCAACATACTGCTTGGCGTAG 58.383 47.619 0.00 0.00 0.00 3.51
2093 2282 4.082571 ACAAGAATCAACATACTGCTTGGC 60.083 41.667 0.00 0.00 36.49 4.52
2094 2283 5.633830 ACAAGAATCAACATACTGCTTGG 57.366 39.130 0.00 0.00 36.49 3.61
2123 2313 5.192927 AGAACGGAATCATCCTGCAATAAA 58.807 37.500 0.00 0.00 44.17 1.40
2217 2413 4.261072 CGCATCATTCAATTCCTCTTCCTG 60.261 45.833 0.00 0.00 0.00 3.86
2376 2579 2.818130 TTTGCTGCCAAAAGGCTAAG 57.182 45.000 8.11 0.00 37.97 2.18
2378 2581 4.382901 CCATTATTTGCTGCCAAAAGGCTA 60.383 41.667 8.11 0.00 43.58 3.93
2388 2591 1.141449 TGCCGCCATTATTTGCTGC 59.859 52.632 0.00 0.00 38.08 5.25
2441 2650 4.225042 TGTATGCTGTCCCAGTTAACATCT 59.775 41.667 8.61 0.00 33.43 2.90
2504 2713 2.092212 ACCATCTTGGCCTACAGGATTG 60.092 50.000 3.32 0.00 42.63 2.67
2623 2848 1.270550 CAGACTGCAACATCCAAACCC 59.729 52.381 0.00 0.00 0.00 4.11
2624 2849 2.229792 TCAGACTGCAACATCCAAACC 58.770 47.619 0.00 0.00 0.00 3.27
2626 2851 4.583907 TCAAATCAGACTGCAACATCCAAA 59.416 37.500 0.00 0.00 0.00 3.28
2629 2854 3.425359 CGTCAAATCAGACTGCAACATCC 60.425 47.826 0.00 0.00 36.38 3.51
2634 2861 2.143122 GGTCGTCAAATCAGACTGCAA 58.857 47.619 0.00 0.00 36.38 4.08
2668 2895 1.264020 TGTCATCAAACACTGCTTCGC 59.736 47.619 0.00 0.00 0.00 4.70
2747 2974 0.734889 ACTTGTCACACTGCTTGCAC 59.265 50.000 0.00 0.00 0.00 4.57
2858 3085 2.924640 CCATCTGGAGCATGCCCT 59.075 61.111 15.66 0.00 37.39 5.19
3193 3435 0.895530 GGATCCTTCACCGTCTCACA 59.104 55.000 3.84 0.00 0.00 3.58
3216 3458 5.400703 TCGGAACCAATAAATTAAAACGGC 58.599 37.500 0.00 0.00 0.00 5.68
3217 3459 7.251994 TCATCGGAACCAATAAATTAAAACGG 58.748 34.615 0.00 0.00 0.00 4.44
3259 3506 2.512692 TCACACATTCCCCTTCCATG 57.487 50.000 0.00 0.00 0.00 3.66
3268 3518 3.891366 CCCTCCCAATATTCACACATTCC 59.109 47.826 0.00 0.00 0.00 3.01
3310 3565 4.642885 TCACTAACCAAACAAACTCAAGGG 59.357 41.667 0.00 0.00 0.00 3.95
3311 3566 5.828299 TCACTAACCAAACAAACTCAAGG 57.172 39.130 0.00 0.00 0.00 3.61
3312 3567 6.697019 CCAATCACTAACCAAACAAACTCAAG 59.303 38.462 0.00 0.00 0.00 3.02
3313 3568 6.378564 TCCAATCACTAACCAAACAAACTCAA 59.621 34.615 0.00 0.00 0.00 3.02
3395 3655 0.312102 GCTCCTGCAACCAGTCAAAC 59.688 55.000 0.00 0.00 37.38 2.93
3396 3656 1.165907 CGCTCCTGCAACCAGTCAAA 61.166 55.000 0.00 0.00 39.64 2.69
3592 3871 4.103469 AGGTACAACCATACAACCAACAGA 59.897 41.667 0.00 0.00 41.95 3.41
3593 3872 4.394729 AGGTACAACCATACAACCAACAG 58.605 43.478 0.00 0.00 41.95 3.16
3594 3873 4.440826 AGGTACAACCATACAACCAACA 57.559 40.909 0.00 0.00 41.95 3.33
3689 4010 2.618241 ACAACATCAACACAACGCAGAT 59.382 40.909 0.00 0.00 0.00 2.90
3697 4018 7.116948 CCAAACTAAAACAACAACATCAACACA 59.883 33.333 0.00 0.00 0.00 3.72
3698 4019 7.117092 ACCAAACTAAAACAACAACATCAACAC 59.883 33.333 0.00 0.00 0.00 3.32
3704 4025 8.785329 AATGAACCAAACTAAAACAACAACAT 57.215 26.923 0.00 0.00 0.00 2.71
3705 4026 7.872993 TGAATGAACCAAACTAAAACAACAACA 59.127 29.630 0.00 0.00 0.00 3.33
3711 4032 8.091449 ACAAACTGAATGAACCAAACTAAAACA 58.909 29.630 0.00 0.00 0.00 2.83
3854 4186 8.959734 ACAAACAAACAAACAAAGTAGACTAC 57.040 30.769 4.32 4.32 0.00 2.73
3891 4227 4.750021 ATTTTAGAACGGAGGGAGTACC 57.250 45.455 0.00 0.00 40.67 3.34
3894 4230 5.897824 TCATCTATTTTAGAACGGAGGGAGT 59.102 40.000 0.00 0.00 38.50 3.85
3895 4231 6.217294 GTCATCTATTTTAGAACGGAGGGAG 58.783 44.000 0.00 0.00 38.50 4.30
3897 4233 5.298347 GGTCATCTATTTTAGAACGGAGGG 58.702 45.833 0.00 0.00 38.50 4.30
3898 4234 5.163343 TGGGTCATCTATTTTAGAACGGAGG 60.163 44.000 0.00 0.00 38.50 4.30
3899 4235 5.914033 TGGGTCATCTATTTTAGAACGGAG 58.086 41.667 0.00 0.00 38.50 4.63
3900 4236 5.943349 TGGGTCATCTATTTTAGAACGGA 57.057 39.130 0.00 0.00 38.50 4.69
3901 4237 6.113411 AGTTGGGTCATCTATTTTAGAACGG 58.887 40.000 0.00 0.00 38.50 4.44
3902 4238 7.611213 AAGTTGGGTCATCTATTTTAGAACG 57.389 36.000 0.00 0.00 38.50 3.95
3950 4286 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
3951 4287 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
3952 4288 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
3953 4289 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
3954 4290 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
3955 4291 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
3956 4292 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
3957 4293 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
3958 4294 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
3959 4295 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
3960 4296 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
3961 4297 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
3962 4298 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
3963 4299 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
3964 4300 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
3965 4301 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
3966 4302 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
3967 4303 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
3968 4304 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
3969 4305 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
3970 4306 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
3971 4307 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
3972 4308 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
3973 4309 2.019807 AACTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
3974 4310 2.622452 CCTAACTACTCCCTCCGTTCCA 60.622 54.545 0.00 0.00 0.00 3.53
3975 4311 2.030371 CCTAACTACTCCCTCCGTTCC 58.970 57.143 0.00 0.00 0.00 3.62
3976 4312 2.732763 ACCTAACTACTCCCTCCGTTC 58.267 52.381 0.00 0.00 0.00 3.95
3977 4313 2.915657 ACCTAACTACTCCCTCCGTT 57.084 50.000 0.00 0.00 0.00 4.44
3978 4314 2.174424 CCTACCTAACTACTCCCTCCGT 59.826 54.545 0.00 0.00 0.00 4.69
3979 4315 2.174424 ACCTACCTAACTACTCCCTCCG 59.826 54.545 0.00 0.00 0.00 4.63
3980 4316 3.969466 ACCTACCTAACTACTCCCTCC 57.031 52.381 0.00 0.00 0.00 4.30
3981 4317 5.129634 GTGTACCTACCTAACTACTCCCTC 58.870 50.000 0.00 0.00 0.00 4.30
3982 4318 4.541714 TGTGTACCTACCTAACTACTCCCT 59.458 45.833 0.00 0.00 0.00 4.20
3983 4319 4.642437 GTGTGTACCTACCTAACTACTCCC 59.358 50.000 0.00 0.00 0.00 4.30
3984 4320 5.256474 TGTGTGTACCTACCTAACTACTCC 58.744 45.833 0.00 0.00 0.00 3.85
3985 4321 6.183360 CCATGTGTGTACCTACCTAACTACTC 60.183 46.154 0.00 0.00 0.00 2.59
3986 4322 5.655532 CCATGTGTGTACCTACCTAACTACT 59.344 44.000 0.00 0.00 0.00 2.57
3991 4327 5.920193 GTACCATGTGTGTACCTACCTAA 57.080 43.478 0.00 0.00 33.95 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.