Multiple sequence alignment - TraesCS2D01G566700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G566700 chr2D 100.000 4105 0 0 1 4105 635666115 635670219 0.000000e+00 7581.0
1 TraesCS2D01G566700 chr2D 92.907 578 30 6 1 568 439391759 439392335 0.000000e+00 830.0
2 TraesCS2D01G566700 chr2B 88.791 2043 71 56 8 1991 793654758 793656701 0.000000e+00 2359.0
3 TraesCS2D01G566700 chr2B 95.040 1371 52 6 2296 3652 634625955 634624587 0.000000e+00 2141.0
4 TraesCS2D01G566700 chr2B 77.956 1184 246 13 2388 3565 123407465 123406291 0.000000e+00 726.0
5 TraesCS2D01G566700 chr7B 95.044 1372 52 7 2296 3652 436645854 436647224 0.000000e+00 2143.0
6 TraesCS2D01G566700 chr7B 97.110 173 5 0 1230 1402 661736978 661736806 4.010000e-75 292.0
7 TraesCS2D01G566700 chr7B 98.039 51 1 0 1034 1084 661737028 661736978 5.650000e-14 89.8
8 TraesCS2D01G566700 chr1B 93.895 1376 68 7 2292 3652 525660757 525662131 0.000000e+00 2061.0
9 TraesCS2D01G566700 chr3A 95.953 1112 30 4 2555 3652 711130333 711129223 0.000000e+00 1790.0
10 TraesCS2D01G566700 chrUn 84.712 1668 96 60 695 2299 124882767 124881196 0.000000e+00 1520.0
11 TraesCS2D01G566700 chrUn 91.209 91 4 1 514 600 124883045 124882955 2.000000e-23 121.0
12 TraesCS2D01G566700 chr7D 93.590 702 21 8 2964 3652 527943800 527943110 0.000000e+00 1026.0
13 TraesCS2D01G566700 chr7D 96.280 457 16 1 3650 4105 573680341 573680797 0.000000e+00 749.0
14 TraesCS2D01G566700 chr7D 95.842 457 18 1 3650 4105 562335597 562335141 0.000000e+00 737.0
15 TraesCS2D01G566700 chr7D 95.269 465 18 4 3644 4105 431411644 431411181 0.000000e+00 734.0
16 TraesCS2D01G566700 chr5D 96.280 457 15 2 3650 4105 220274170 220274625 0.000000e+00 749.0
17 TraesCS2D01G566700 chr5D 95.842 457 18 1 3650 4105 8084354 8084810 0.000000e+00 737.0
18 TraesCS2D01G566700 chr5D 95.842 457 18 1 3650 4105 379348036 379347580 0.000000e+00 737.0
19 TraesCS2D01G566700 chr6D 78.220 1180 244 12 2388 3562 49456303 49457474 0.000000e+00 743.0
20 TraesCS2D01G566700 chr6D 96.061 457 17 1 3650 4105 361299983 361300439 0.000000e+00 743.0
21 TraesCS2D01G566700 chr1D 96.061 457 16 2 3650 4105 102581256 102581711 0.000000e+00 743.0
22 TraesCS2D01G566700 chr1D 95.833 456 17 2 3650 4105 101357932 101358385 0.000000e+00 736.0
23 TraesCS2D01G566700 chr3D 78.565 1143 227 15 2388 3522 62340294 62339162 0.000000e+00 737.0
24 TraesCS2D01G566700 chr3D 78.022 1183 247 12 2388 3565 3361394 3360220 0.000000e+00 732.0
25 TraesCS2D01G566700 chr3D 77.881 1180 248 11 2388 3562 573426225 573427396 0.000000e+00 721.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G566700 chr2D 635666115 635670219 4104 False 7581.0 7581 100.0000 1 4105 1 chr2D.!!$F2 4104
1 TraesCS2D01G566700 chr2D 439391759 439392335 576 False 830.0 830 92.9070 1 568 1 chr2D.!!$F1 567
2 TraesCS2D01G566700 chr2B 793654758 793656701 1943 False 2359.0 2359 88.7910 8 1991 1 chr2B.!!$F1 1983
3 TraesCS2D01G566700 chr2B 634624587 634625955 1368 True 2141.0 2141 95.0400 2296 3652 1 chr2B.!!$R2 1356
4 TraesCS2D01G566700 chr2B 123406291 123407465 1174 True 726.0 726 77.9560 2388 3565 1 chr2B.!!$R1 1177
5 TraesCS2D01G566700 chr7B 436645854 436647224 1370 False 2143.0 2143 95.0440 2296 3652 1 chr7B.!!$F1 1356
6 TraesCS2D01G566700 chr1B 525660757 525662131 1374 False 2061.0 2061 93.8950 2292 3652 1 chr1B.!!$F1 1360
7 TraesCS2D01G566700 chr3A 711129223 711130333 1110 True 1790.0 1790 95.9530 2555 3652 1 chr3A.!!$R1 1097
8 TraesCS2D01G566700 chrUn 124881196 124883045 1849 True 820.5 1520 87.9605 514 2299 2 chrUn.!!$R1 1785
9 TraesCS2D01G566700 chr7D 527943110 527943800 690 True 1026.0 1026 93.5900 2964 3652 1 chr7D.!!$R2 688
10 TraesCS2D01G566700 chr6D 49456303 49457474 1171 False 743.0 743 78.2200 2388 3562 1 chr6D.!!$F1 1174
11 TraesCS2D01G566700 chr3D 62339162 62340294 1132 True 737.0 737 78.5650 2388 3522 1 chr3D.!!$R2 1134
12 TraesCS2D01G566700 chr3D 3360220 3361394 1174 True 732.0 732 78.0220 2388 3565 1 chr3D.!!$R1 1177
13 TraesCS2D01G566700 chr3D 573426225 573427396 1171 False 721.0 721 77.8810 2388 3562 1 chr3D.!!$F1 1174

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
893 1080 0.588252 CTCTCAAGTTTGCACCACCG 59.412 55.0 0.0 0.0 0.00 4.94 F
1021 1221 0.449388 GGCAAAGATTGTGCTCCTCG 59.551 55.0 0.0 0.0 41.88 4.63 F
1026 1226 0.534412 AGATTGTGCTCCTCGTCCTG 59.466 55.0 0.0 0.0 0.00 3.86 F
2117 2349 0.535102 AACCAAACAGGACCGCAGAG 60.535 55.0 0.0 0.0 41.22 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2118 2350 0.318869 TGCTTCATTGGCAAAGTGCG 60.319 50.000 3.01 0.00 46.21 5.34 R
2302 2554 1.000717 CCCAACGCGGTTTCATTTTCT 60.001 47.619 12.47 0.00 0.00 2.52 R
2475 2728 1.131638 TCTCTTGGAACCTGCAGTGT 58.868 50.000 13.81 7.51 0.00 3.55 R
3854 4126 0.041684 CCCCCTGGCCTTGATTCTTT 59.958 55.000 3.32 0.00 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
134 142 8.113173 AGAGCTCGTTTAGGATAAACTATAGG 57.887 38.462 8.37 0.00 0.00 2.57
153 161 6.708885 ATAGGCAATTTCATCTCTATCCCA 57.291 37.500 0.00 0.00 0.00 4.37
198 209 2.247437 GCTGCCACTAGCCGTATGC 61.247 63.158 0.00 0.00 42.71 3.14
290 301 8.217799 CCCCCAAACTATTTATATCTGTCTGAA 58.782 37.037 0.00 0.00 0.00 3.02
320 331 7.012610 GCCCTTTGAGTTTAGTTAGTGTTGTTA 59.987 37.037 0.00 0.00 0.00 2.41
458 470 7.410120 AGGTTGGAAGCTTGAATTATTTAGG 57.590 36.000 2.10 0.00 31.69 2.69
459 471 6.954102 AGGTTGGAAGCTTGAATTATTTAGGT 59.046 34.615 2.10 0.00 31.69 3.08
460 472 7.454694 AGGTTGGAAGCTTGAATTATTTAGGTT 59.545 33.333 2.10 5.56 31.69 3.50
461 473 7.545615 GGTTGGAAGCTTGAATTATTTAGGTTG 59.454 37.037 2.10 0.00 0.00 3.77
462 474 6.630071 TGGAAGCTTGAATTATTTAGGTTGC 58.370 36.000 2.10 13.22 37.10 4.17
463 475 6.210385 TGGAAGCTTGAATTATTTAGGTTGCA 59.790 34.615 2.10 16.45 41.76 4.08
464 476 7.093377 TGGAAGCTTGAATTATTTAGGTTGCAT 60.093 33.333 2.10 0.00 40.06 3.96
465 477 7.223387 GGAAGCTTGAATTATTTAGGTTGCATG 59.777 37.037 2.10 0.00 36.74 4.06
466 478 6.044682 AGCTTGAATTATTTAGGTTGCATGC 58.955 36.000 11.82 11.82 0.00 4.06
467 479 5.811613 GCTTGAATTATTTAGGTTGCATGCA 59.188 36.000 18.46 18.46 0.00 3.96
468 480 6.237915 GCTTGAATTATTTAGGTTGCATGCAC 60.238 38.462 22.58 15.35 0.00 4.57
469 481 6.278172 TGAATTATTTAGGTTGCATGCACA 57.722 33.333 22.58 9.24 0.00 4.57
470 482 6.695429 TGAATTATTTAGGTTGCATGCACAA 58.305 32.000 22.58 3.29 0.00 3.33
618 724 2.939640 GCGGTGTGTCATGGACCTAATT 60.940 50.000 0.00 0.00 0.00 1.40
620 726 3.869246 CGGTGTGTCATGGACCTAATTAC 59.131 47.826 0.00 0.00 0.00 1.89
624 730 7.107542 GGTGTGTCATGGACCTAATTACTTAA 58.892 38.462 0.00 0.00 0.00 1.85
635 741 9.006839 GGACCTAATTACTTAATTTAATCCCCG 57.993 37.037 0.00 0.00 37.16 5.73
851 1020 8.187913 TGATCAATTTCAAGTTGGATTGGTTA 57.812 30.769 21.90 14.68 31.97 2.85
856 1025 9.139174 CAATTTCAAGTTGGATTGGTTATGTAC 57.861 33.333 17.84 0.00 0.00 2.90
863 1040 6.013725 AGTTGGATTGGTTATGTACTGACTGA 60.014 38.462 0.00 0.00 0.00 3.41
864 1041 5.730550 TGGATTGGTTATGTACTGACTGAC 58.269 41.667 0.00 0.00 0.00 3.51
865 1042 5.483937 TGGATTGGTTATGTACTGACTGACT 59.516 40.000 0.00 0.00 0.00 3.41
866 1043 5.812642 GGATTGGTTATGTACTGACTGACTG 59.187 44.000 0.00 0.00 0.00 3.51
880 1057 4.344968 TGACTGACTGGATCAAACTCTCAA 59.655 41.667 0.00 0.00 36.69 3.02
881 1058 4.892433 ACTGACTGGATCAAACTCTCAAG 58.108 43.478 0.00 0.00 36.69 3.02
893 1080 0.588252 CTCTCAAGTTTGCACCACCG 59.412 55.000 0.00 0.00 0.00 4.94
896 1083 1.008538 CAAGTTTGCACCACCGCTC 60.009 57.895 0.00 0.00 0.00 5.03
897 1084 2.193536 AAGTTTGCACCACCGCTCC 61.194 57.895 0.00 0.00 0.00 4.70
898 1085 2.594592 GTTTGCACCACCGCTCCT 60.595 61.111 0.00 0.00 0.00 3.69
899 1086 2.281484 TTTGCACCACCGCTCCTC 60.281 61.111 0.00 0.00 0.00 3.71
900 1087 3.842925 TTTGCACCACCGCTCCTCC 62.843 63.158 0.00 0.00 0.00 4.30
904 1091 1.379977 CACCACCGCTCCTCCTCTA 60.380 63.158 0.00 0.00 0.00 2.43
985 1177 6.169419 TCAAGAATCGATCACACACATTTC 57.831 37.500 0.00 0.00 0.00 2.17
986 1178 5.700373 TCAAGAATCGATCACACACATTTCA 59.300 36.000 0.00 0.00 0.00 2.69
987 1179 6.204495 TCAAGAATCGATCACACACATTTCAA 59.796 34.615 0.00 0.00 0.00 2.69
988 1180 6.174451 AGAATCGATCACACACATTTCAAG 57.826 37.500 0.00 0.00 0.00 3.02
989 1181 5.702670 AGAATCGATCACACACATTTCAAGT 59.297 36.000 0.00 0.00 0.00 3.16
990 1182 5.947228 ATCGATCACACACATTTCAAGTT 57.053 34.783 0.00 0.00 0.00 2.66
997 1197 9.891828 GATCACACACATTTCAAGTTATAAACA 57.108 29.630 0.00 0.00 0.00 2.83
1021 1221 0.449388 GGCAAAGATTGTGCTCCTCG 59.551 55.000 0.00 0.00 41.88 4.63
1022 1222 1.160137 GCAAAGATTGTGCTCCTCGT 58.840 50.000 0.00 0.00 39.00 4.18
1023 1223 1.129437 GCAAAGATTGTGCTCCTCGTC 59.871 52.381 0.00 0.00 39.00 4.20
1024 1224 1.734465 CAAAGATTGTGCTCCTCGTCC 59.266 52.381 0.00 0.00 0.00 4.79
1025 1225 1.270907 AAGATTGTGCTCCTCGTCCT 58.729 50.000 0.00 0.00 0.00 3.85
1026 1226 0.534412 AGATTGTGCTCCTCGTCCTG 59.466 55.000 0.00 0.00 0.00 3.86
1027 1227 1.078848 ATTGTGCTCCTCGTCCTGC 60.079 57.895 0.00 0.00 0.00 4.85
1028 1228 2.527951 ATTGTGCTCCTCGTCCTGCC 62.528 60.000 0.00 0.00 0.00 4.85
1029 1229 4.459089 GTGCTCCTCGTCCTGCCC 62.459 72.222 0.00 0.00 0.00 5.36
1030 1230 4.704103 TGCTCCTCGTCCTGCCCT 62.704 66.667 0.00 0.00 0.00 5.19
1031 1231 3.394836 GCTCCTCGTCCTGCCCTT 61.395 66.667 0.00 0.00 0.00 3.95
1032 1232 2.581354 CTCCTCGTCCTGCCCTTG 59.419 66.667 0.00 0.00 0.00 3.61
1446 1649 3.065575 CCTGTACAAGGGCGACATC 57.934 57.895 0.00 0.00 43.15 3.06
1628 1831 0.730834 CTCGACGACTTGCAGGTCAG 60.731 60.000 26.29 20.37 36.12 3.51
1681 1890 2.328319 GAGCCATCCTCTTCTCCATCT 58.672 52.381 0.00 0.00 37.60 2.90
1682 1891 3.116977 TGAGCCATCCTCTTCTCCATCTA 60.117 47.826 0.00 0.00 41.35 1.98
1686 1895 4.085733 CCATCCTCTTCTCCATCTATCGT 58.914 47.826 0.00 0.00 0.00 3.73
1687 1896 4.082300 CCATCCTCTTCTCCATCTATCGTG 60.082 50.000 0.00 0.00 0.00 4.35
1688 1897 4.171878 TCCTCTTCTCCATCTATCGTGT 57.828 45.455 0.00 0.00 0.00 4.49
1689 1898 5.306114 TCCTCTTCTCCATCTATCGTGTA 57.694 43.478 0.00 0.00 0.00 2.90
1692 1901 3.813724 TCTTCTCCATCTATCGTGTACCG 59.186 47.826 0.00 0.00 38.13 4.02
1693 1902 2.501261 TCTCCATCTATCGTGTACCGG 58.499 52.381 0.00 0.00 37.11 5.28
1694 1903 2.158711 TCTCCATCTATCGTGTACCGGT 60.159 50.000 13.98 13.98 37.11 5.28
1696 1905 1.069432 CCATCTATCGTGTACCGGTCG 60.069 57.143 12.40 9.58 37.11 4.79
1697 1906 1.869132 CATCTATCGTGTACCGGTCGA 59.131 52.381 12.40 15.85 37.11 4.20
1698 1907 2.022764 TCTATCGTGTACCGGTCGAA 57.977 50.000 19.17 9.13 37.16 3.71
1701 1920 2.199291 ATCGTGTACCGGTCGAATTC 57.801 50.000 19.17 0.00 37.16 2.17
1740 1963 1.808411 TGTTGTTCTCCGGCTTGATC 58.192 50.000 0.00 0.00 0.00 2.92
1820 2048 5.478679 TGTATGTGGGGTCAAATTTTCGAAT 59.521 36.000 0.00 0.00 0.00 3.34
1981 2213 7.405292 ACAACTAATTCATTTGAGATCCAGGA 58.595 34.615 0.00 0.00 0.00 3.86
1986 2218 9.270640 CTAATTCATTTGAGATCCAGGAACTAG 57.729 37.037 0.00 0.00 36.02 2.57
1991 2223 6.874278 TTTGAGATCCAGGAACTAGATTCA 57.126 37.500 0.00 0.00 36.83 2.57
2044 2276 9.739786 CAAGTTCAAACAAACAACTATTTCAAC 57.260 29.630 0.00 0.00 30.00 3.18
2053 2285 7.489113 ACAAACAACTATTTCAACTCAGCTTTG 59.511 33.333 0.00 0.00 0.00 2.77
2085 2317 6.504398 AGCGAATCTACAATTGACTCGAATA 58.496 36.000 13.59 0.00 0.00 1.75
2087 2319 7.653713 AGCGAATCTACAATTGACTCGAATAAT 59.346 33.333 13.59 0.00 0.00 1.28
2114 2346 0.817634 CTGAACCAAACAGGACCGCA 60.818 55.000 0.00 0.00 41.22 5.69
2117 2349 0.535102 AACCAAACAGGACCGCAGAG 60.535 55.000 0.00 0.00 41.22 3.35
2118 2350 2.328099 CCAAACAGGACCGCAGAGC 61.328 63.158 0.00 0.00 41.22 4.09
2130 2362 3.033184 CAGAGCGCACTTTGCCAA 58.967 55.556 11.47 0.00 41.12 4.52
2162 2394 7.951530 AATTCACAGACAATTTGAATCCAAC 57.048 32.000 2.79 0.00 38.70 3.77
2183 2415 1.410153 CAAAGCTGAAACAAGCAGGGT 59.590 47.619 0.00 0.00 46.08 4.34
2190 2441 4.700213 GCTGAAACAAGCAGGGTCTAATTA 59.300 41.667 0.00 0.00 43.01 1.40
2194 2445 3.190439 ACAAGCAGGGTCTAATTAGGGT 58.810 45.455 12.54 0.00 0.00 4.34
2197 2448 4.554553 AGCAGGGTCTAATTAGGGTAGA 57.445 45.455 12.54 0.00 0.00 2.59
2198 2449 4.892198 AGCAGGGTCTAATTAGGGTAGAA 58.108 43.478 12.54 0.00 29.52 2.10
2205 2456 8.074991 AGGGTCTAATTAGGGTAGAAGATTTCT 58.925 37.037 12.54 0.00 43.72 2.52
2265 2517 7.690224 CGATGTTGAGAGACGTACATATGATAG 59.310 40.741 10.38 2.26 31.76 2.08
2267 2519 7.862648 TGTTGAGAGACGTACATATGATAGAC 58.137 38.462 10.38 1.11 0.00 2.59
2302 2554 5.760253 GCTTTACATTGGCTTCTCTGCTATA 59.240 40.000 0.00 0.00 0.00 1.31
2363 2615 2.608261 CGAGAGGAGCAAGAAGAACGTT 60.608 50.000 0.00 0.00 0.00 3.99
2461 2714 2.785258 CGCAAGTTAGCCTTCGCC 59.215 61.111 0.00 0.00 34.57 5.54
2475 2728 1.463056 CTTCGCCGCAATGTTACAGAA 59.537 47.619 0.00 0.00 0.00 3.02
2709 2965 1.905894 GGATAGGAGGAGGGAATCTGC 59.094 57.143 0.00 0.00 0.00 4.26
2913 3169 5.646360 TCGACCCAATGTTATCTTTCTTTCC 59.354 40.000 0.00 0.00 0.00 3.13
3231 3488 0.035739 TGGGTGACTTTAACGAGGCC 59.964 55.000 0.00 0.00 0.00 5.19
3375 3632 9.726438 ACTTATAATAATAAGCAAGAAGGCGAT 57.274 29.630 5.30 0.00 45.80 4.58
3562 3819 5.467738 TGAGGTATGAATCATACTGGGAGT 58.532 41.667 26.61 9.79 44.16 3.85
3614 3886 4.290985 TGGACTAAAGGGATTCATGTGGAA 59.709 41.667 0.00 0.00 40.46 3.53
3660 3932 9.826574 ATCTAGATAGAGTTATGATACGTCTCC 57.173 37.037 2.53 0.00 35.50 3.71
3661 3933 6.971527 AGATAGAGTTATGATACGTCTCCG 57.028 41.667 0.00 0.00 40.83 4.63
3663 3935 6.591062 AGATAGAGTTATGATACGTCTCCGTC 59.409 42.308 0.00 0.00 46.28 4.79
3664 3936 3.493877 AGAGTTATGATACGTCTCCGTCG 59.506 47.826 0.00 0.00 46.28 5.12
3665 3937 3.201290 AGTTATGATACGTCTCCGTCGT 58.799 45.455 0.00 0.00 46.28 4.34
3666 3938 4.371786 AGTTATGATACGTCTCCGTCGTA 58.628 43.478 0.00 0.00 46.28 3.43
3672 3944 2.593346 ACGTCTCCGTCGTATCTACT 57.407 50.000 0.00 0.00 46.28 2.57
3673 3945 2.898705 ACGTCTCCGTCGTATCTACTT 58.101 47.619 0.00 0.00 46.28 2.24
3674 3946 3.265791 ACGTCTCCGTCGTATCTACTTT 58.734 45.455 0.00 0.00 46.28 2.66
3675 3947 3.686726 ACGTCTCCGTCGTATCTACTTTT 59.313 43.478 0.00 0.00 46.28 2.27
3676 3948 4.201763 ACGTCTCCGTCGTATCTACTTTTC 60.202 45.833 0.00 0.00 46.28 2.29
3677 3949 4.596097 GTCTCCGTCGTATCTACTTTTCC 58.404 47.826 0.00 0.00 0.00 3.13
3678 3950 4.095483 GTCTCCGTCGTATCTACTTTTCCA 59.905 45.833 0.00 0.00 0.00 3.53
3679 3951 4.701651 TCTCCGTCGTATCTACTTTTCCAA 59.298 41.667 0.00 0.00 0.00 3.53
3680 3952 5.183713 TCTCCGTCGTATCTACTTTTCCAAA 59.816 40.000 0.00 0.00 0.00 3.28
3681 3953 5.163513 TCCGTCGTATCTACTTTTCCAAAC 58.836 41.667 0.00 0.00 0.00 2.93
3682 3954 4.925054 CCGTCGTATCTACTTTTCCAAACA 59.075 41.667 0.00 0.00 0.00 2.83
3683 3955 5.164022 CCGTCGTATCTACTTTTCCAAACAC 60.164 44.000 0.00 0.00 0.00 3.32
3684 3956 5.632347 CGTCGTATCTACTTTTCCAAACACT 59.368 40.000 0.00 0.00 0.00 3.55
3685 3957 6.145048 CGTCGTATCTACTTTTCCAAACACTT 59.855 38.462 0.00 0.00 0.00 3.16
3686 3958 7.306983 CGTCGTATCTACTTTTCCAAACACTTT 60.307 37.037 0.00 0.00 0.00 2.66
3687 3959 8.340443 GTCGTATCTACTTTTCCAAACACTTTT 58.660 33.333 0.00 0.00 0.00 2.27
3688 3960 8.339714 TCGTATCTACTTTTCCAAACACTTTTG 58.660 33.333 0.00 0.00 41.71 2.44
3689 3961 7.112984 CGTATCTACTTTTCCAAACACTTTTGC 59.887 37.037 0.00 0.00 40.84 3.68
3690 3962 5.656480 TCTACTTTTCCAAACACTTTTGCC 58.344 37.500 0.00 0.00 40.84 4.52
3691 3963 3.605634 ACTTTTCCAAACACTTTTGCCC 58.394 40.909 0.00 0.00 40.84 5.36
3692 3964 3.263170 ACTTTTCCAAACACTTTTGCCCT 59.737 39.130 0.00 0.00 40.84 5.19
3693 3965 3.990959 TTTCCAAACACTTTTGCCCTT 57.009 38.095 0.00 0.00 40.84 3.95
3694 3966 2.977772 TCCAAACACTTTTGCCCTTG 57.022 45.000 0.00 0.00 40.84 3.61
3695 3967 2.183679 TCCAAACACTTTTGCCCTTGT 58.816 42.857 0.00 0.00 40.84 3.16
3696 3968 2.569404 TCCAAACACTTTTGCCCTTGTT 59.431 40.909 0.00 0.00 40.84 2.83
3697 3969 3.008485 TCCAAACACTTTTGCCCTTGTTT 59.992 39.130 0.00 0.00 41.69 2.83
3698 3970 3.755905 CCAAACACTTTTGCCCTTGTTTT 59.244 39.130 0.00 0.00 39.56 2.43
3699 3971 4.379290 CCAAACACTTTTGCCCTTGTTTTG 60.379 41.667 0.00 0.00 39.56 2.44
3700 3972 2.984562 ACACTTTTGCCCTTGTTTTGG 58.015 42.857 0.00 0.00 0.00 3.28
3701 3973 2.569404 ACACTTTTGCCCTTGTTTTGGA 59.431 40.909 0.00 0.00 0.00 3.53
3702 3974 2.935849 CACTTTTGCCCTTGTTTTGGAC 59.064 45.455 0.00 0.00 0.00 4.02
3703 3975 2.837591 ACTTTTGCCCTTGTTTTGGACT 59.162 40.909 0.00 0.00 0.00 3.85
3704 3976 3.118775 ACTTTTGCCCTTGTTTTGGACTC 60.119 43.478 0.00 0.00 0.00 3.36
3705 3977 2.452600 TTGCCCTTGTTTTGGACTCT 57.547 45.000 0.00 0.00 0.00 3.24
3706 3978 3.586470 TTGCCCTTGTTTTGGACTCTA 57.414 42.857 0.00 0.00 0.00 2.43
3707 3979 3.586470 TGCCCTTGTTTTGGACTCTAA 57.414 42.857 0.00 0.00 0.00 2.10
3708 3980 3.219281 TGCCCTTGTTTTGGACTCTAAC 58.781 45.455 0.00 0.00 0.00 2.34
3709 3981 3.117663 TGCCCTTGTTTTGGACTCTAACT 60.118 43.478 0.00 0.00 0.00 2.24
3710 3982 3.889538 GCCCTTGTTTTGGACTCTAACTT 59.110 43.478 0.00 0.00 0.00 2.66
3711 3983 4.261614 GCCCTTGTTTTGGACTCTAACTTG 60.262 45.833 0.00 0.00 0.00 3.16
3712 3984 4.261614 CCCTTGTTTTGGACTCTAACTTGC 60.262 45.833 0.00 0.00 0.00 4.01
3713 3985 4.338118 CCTTGTTTTGGACTCTAACTTGCA 59.662 41.667 0.00 0.00 0.00 4.08
3714 3986 5.010012 CCTTGTTTTGGACTCTAACTTGCAT 59.990 40.000 0.00 0.00 0.00 3.96
3715 3987 5.437289 TGTTTTGGACTCTAACTTGCATG 57.563 39.130 0.00 0.00 0.00 4.06
3716 3988 5.129634 TGTTTTGGACTCTAACTTGCATGA 58.870 37.500 6.60 0.00 0.00 3.07
3717 3989 5.769662 TGTTTTGGACTCTAACTTGCATGAT 59.230 36.000 6.60 0.00 0.00 2.45
3718 3990 6.265196 TGTTTTGGACTCTAACTTGCATGATT 59.735 34.615 6.60 0.30 0.00 2.57
3719 3991 6.899393 TTTGGACTCTAACTTGCATGATTT 57.101 33.333 6.60 0.00 0.00 2.17
3720 3992 5.885230 TGGACTCTAACTTGCATGATTTG 57.115 39.130 6.60 0.00 0.00 2.32
3721 3993 5.559770 TGGACTCTAACTTGCATGATTTGA 58.440 37.500 6.60 3.51 0.00 2.69
3722 3994 6.003326 TGGACTCTAACTTGCATGATTTGAA 58.997 36.000 6.60 0.00 0.00 2.69
3723 3995 6.660521 TGGACTCTAACTTGCATGATTTGAAT 59.339 34.615 6.60 0.00 0.00 2.57
3724 3996 6.971184 GGACTCTAACTTGCATGATTTGAATG 59.029 38.462 6.60 0.00 0.00 2.67
3725 3997 6.860080 ACTCTAACTTGCATGATTTGAATGG 58.140 36.000 6.60 0.00 0.00 3.16
3726 3998 6.660521 ACTCTAACTTGCATGATTTGAATGGA 59.339 34.615 6.60 0.00 0.00 3.41
3727 3999 7.177216 ACTCTAACTTGCATGATTTGAATGGAA 59.823 33.333 6.60 0.00 34.65 3.53
3728 4000 7.315142 TCTAACTTGCATGATTTGAATGGAAC 58.685 34.615 6.60 0.00 32.71 3.62
3729 4001 5.733620 ACTTGCATGATTTGAATGGAACT 57.266 34.783 6.60 0.00 32.71 3.01
3730 4002 6.839124 ACTTGCATGATTTGAATGGAACTA 57.161 33.333 6.60 0.00 32.71 2.24
3731 4003 7.230849 ACTTGCATGATTTGAATGGAACTAA 57.769 32.000 6.60 0.00 32.71 2.24
3732 4004 7.092716 ACTTGCATGATTTGAATGGAACTAAC 58.907 34.615 6.60 0.00 32.71 2.34
3733 4005 6.839124 TGCATGATTTGAATGGAACTAACT 57.161 33.333 0.00 0.00 0.00 2.24
3734 4006 7.230849 TGCATGATTTGAATGGAACTAACTT 57.769 32.000 0.00 0.00 0.00 2.66
3735 4007 7.092079 TGCATGATTTGAATGGAACTAACTTG 58.908 34.615 0.00 0.00 0.00 3.16
3736 4008 6.532657 GCATGATTTGAATGGAACTAACTTGG 59.467 38.462 0.00 0.00 0.00 3.61
3737 4009 7.577426 GCATGATTTGAATGGAACTAACTTGGA 60.577 37.037 0.00 0.00 0.00 3.53
3738 4010 7.214467 TGATTTGAATGGAACTAACTTGGAC 57.786 36.000 0.00 0.00 0.00 4.02
3739 4011 7.004086 TGATTTGAATGGAACTAACTTGGACT 58.996 34.615 0.00 0.00 0.00 3.85
3740 4012 6.633500 TTTGAATGGAACTAACTTGGACTG 57.367 37.500 0.00 0.00 0.00 3.51
3741 4013 5.560722 TGAATGGAACTAACTTGGACTGA 57.439 39.130 0.00 0.00 0.00 3.41
3742 4014 5.305585 TGAATGGAACTAACTTGGACTGAC 58.694 41.667 0.00 0.00 0.00 3.51
3743 4015 3.380479 TGGAACTAACTTGGACTGACG 57.620 47.619 0.00 0.00 0.00 4.35
3744 4016 2.067013 GGAACTAACTTGGACTGACGC 58.933 52.381 0.00 0.00 0.00 5.19
3745 4017 2.288886 GGAACTAACTTGGACTGACGCT 60.289 50.000 0.00 0.00 0.00 5.07
3746 4018 2.440539 ACTAACTTGGACTGACGCTG 57.559 50.000 0.00 0.00 0.00 5.18
3747 4019 1.687123 ACTAACTTGGACTGACGCTGT 59.313 47.619 0.00 0.00 0.00 4.40
3748 4020 2.102588 ACTAACTTGGACTGACGCTGTT 59.897 45.455 0.00 0.00 0.00 3.16
3749 4021 2.038387 AACTTGGACTGACGCTGTTT 57.962 45.000 0.00 0.00 0.00 2.83
3750 4022 2.038387 ACTTGGACTGACGCTGTTTT 57.962 45.000 0.00 0.00 0.00 2.43
3751 4023 2.365582 ACTTGGACTGACGCTGTTTTT 58.634 42.857 0.00 0.00 0.00 1.94
3752 4024 3.537580 ACTTGGACTGACGCTGTTTTTA 58.462 40.909 0.00 0.00 0.00 1.52
3753 4025 3.560068 ACTTGGACTGACGCTGTTTTTAG 59.440 43.478 0.00 0.00 0.00 1.85
3754 4026 1.871039 TGGACTGACGCTGTTTTTAGC 59.129 47.619 0.00 0.00 40.29 3.09
3755 4027 1.871039 GGACTGACGCTGTTTTTAGCA 59.129 47.619 0.00 0.00 43.87 3.49
3756 4028 2.096218 GGACTGACGCTGTTTTTAGCAG 60.096 50.000 0.00 0.00 43.87 4.24
3757 4029 2.800544 GACTGACGCTGTTTTTAGCAGA 59.199 45.455 0.00 0.00 43.87 4.26
3758 4030 3.202906 ACTGACGCTGTTTTTAGCAGAA 58.797 40.909 0.00 0.00 43.87 3.02
3759 4031 3.815401 ACTGACGCTGTTTTTAGCAGAAT 59.185 39.130 0.00 0.00 43.87 2.40
3760 4032 4.275936 ACTGACGCTGTTTTTAGCAGAATT 59.724 37.500 0.00 0.00 43.87 2.17
3761 4033 4.536065 TGACGCTGTTTTTAGCAGAATTG 58.464 39.130 0.00 0.00 43.87 2.32
3773 4045 3.806625 GCAGAATTGCCATGGTGTTAT 57.193 42.857 14.67 0.41 44.74 1.89
3774 4046 3.709987 GCAGAATTGCCATGGTGTTATC 58.290 45.455 14.67 6.13 44.74 1.75
3775 4047 3.382546 GCAGAATTGCCATGGTGTTATCT 59.617 43.478 14.67 8.34 44.74 1.98
3776 4048 4.142093 GCAGAATTGCCATGGTGTTATCTT 60.142 41.667 14.67 0.00 44.74 2.40
3777 4049 5.625197 GCAGAATTGCCATGGTGTTATCTTT 60.625 40.000 14.67 0.00 44.74 2.52
3778 4050 5.808540 CAGAATTGCCATGGTGTTATCTTTG 59.191 40.000 14.67 0.00 0.00 2.77
3779 4051 5.481473 AGAATTGCCATGGTGTTATCTTTGT 59.519 36.000 14.67 0.00 0.00 2.83
3780 4052 4.517952 TTGCCATGGTGTTATCTTTGTG 57.482 40.909 14.67 0.00 0.00 3.33
3781 4053 2.230992 TGCCATGGTGTTATCTTTGTGC 59.769 45.455 14.67 0.00 0.00 4.57
3782 4054 2.230992 GCCATGGTGTTATCTTTGTGCA 59.769 45.455 14.67 0.00 0.00 4.57
3783 4055 3.674138 GCCATGGTGTTATCTTTGTGCAG 60.674 47.826 14.67 0.00 0.00 4.41
3784 4056 3.758023 CCATGGTGTTATCTTTGTGCAGA 59.242 43.478 2.57 0.00 0.00 4.26
3785 4057 4.218200 CCATGGTGTTATCTTTGTGCAGAA 59.782 41.667 2.57 0.00 0.00 3.02
3786 4058 5.278907 CCATGGTGTTATCTTTGTGCAGAAA 60.279 40.000 8.90 8.90 0.00 2.52
3787 4059 5.181690 TGGTGTTATCTTTGTGCAGAAAC 57.818 39.130 4.66 0.00 0.00 2.78
3788 4060 4.642437 TGGTGTTATCTTTGTGCAGAAACA 59.358 37.500 4.66 0.00 0.00 2.83
3789 4061 5.126222 TGGTGTTATCTTTGTGCAGAAACAA 59.874 36.000 4.66 0.00 38.26 2.83
3790 4062 6.039616 GGTGTTATCTTTGTGCAGAAACAAA 58.960 36.000 4.66 2.52 45.38 2.83
3791 4063 6.533367 GGTGTTATCTTTGTGCAGAAACAAAA 59.467 34.615 4.66 0.00 46.43 2.44
3792 4064 7.254084 GGTGTTATCTTTGTGCAGAAACAAAAG 60.254 37.037 4.66 0.00 46.43 2.27
3793 4065 7.275560 GTGTTATCTTTGTGCAGAAACAAAAGT 59.724 33.333 4.66 0.00 46.43 2.66
3794 4066 7.816995 TGTTATCTTTGTGCAGAAACAAAAGTT 59.183 29.630 4.66 0.00 46.43 2.66
3795 4067 6.892310 ATCTTTGTGCAGAAACAAAAGTTC 57.108 33.333 4.66 0.00 46.43 3.01
3796 4068 6.024552 TCTTTGTGCAGAAACAAAAGTTCT 57.975 33.333 4.66 0.00 46.43 3.01
3797 4069 6.092748 TCTTTGTGCAGAAACAAAAGTTCTC 58.907 36.000 4.66 0.00 46.43 2.87
3798 4070 4.014847 TGTGCAGAAACAAAAGTTCTCG 57.985 40.909 0.00 0.00 32.96 4.04
3799 4071 3.181501 TGTGCAGAAACAAAAGTTCTCGG 60.182 43.478 0.00 0.00 32.96 4.63
3800 4072 3.064820 GTGCAGAAACAAAAGTTCTCGGA 59.935 43.478 0.00 0.00 32.96 4.55
3801 4073 3.692101 TGCAGAAACAAAAGTTCTCGGAA 59.308 39.130 0.00 0.00 32.96 4.30
3802 4074 4.338118 TGCAGAAACAAAAGTTCTCGGAAT 59.662 37.500 0.00 0.00 32.96 3.01
3803 4075 4.676924 GCAGAAACAAAAGTTCTCGGAATG 59.323 41.667 0.00 0.00 32.96 2.67
3804 4076 5.505654 GCAGAAACAAAAGTTCTCGGAATGA 60.506 40.000 0.00 0.00 32.96 2.57
3805 4077 5.909610 CAGAAACAAAAGTTCTCGGAATGAC 59.090 40.000 0.00 0.00 32.96 3.06
3806 4078 4.830826 AACAAAAGTTCTCGGAATGACC 57.169 40.909 0.00 0.00 0.00 4.02
3807 4079 4.086706 ACAAAAGTTCTCGGAATGACCT 57.913 40.909 0.00 0.00 36.31 3.85
3808 4080 3.815401 ACAAAAGTTCTCGGAATGACCTG 59.185 43.478 0.00 0.00 36.31 4.00
3809 4081 4.065088 CAAAAGTTCTCGGAATGACCTGA 58.935 43.478 0.00 0.00 36.31 3.86
3810 4082 4.351874 AAAGTTCTCGGAATGACCTGAA 57.648 40.909 0.00 0.00 36.31 3.02
3811 4083 4.351874 AAGTTCTCGGAATGACCTGAAA 57.648 40.909 0.00 0.00 36.31 2.69
3812 4084 3.665190 AGTTCTCGGAATGACCTGAAAC 58.335 45.455 0.00 0.00 36.31 2.78
3813 4085 3.325135 AGTTCTCGGAATGACCTGAAACT 59.675 43.478 0.00 0.00 36.31 2.66
3814 4086 4.065789 GTTCTCGGAATGACCTGAAACTT 58.934 43.478 0.00 0.00 36.31 2.66
3815 4087 3.926616 TCTCGGAATGACCTGAAACTTC 58.073 45.455 0.00 0.00 36.31 3.01
3816 4088 3.323691 TCTCGGAATGACCTGAAACTTCA 59.676 43.478 0.00 0.00 36.31 3.02
3817 4089 3.399330 TCGGAATGACCTGAAACTTCAC 58.601 45.455 0.00 0.00 36.31 3.18
3818 4090 2.157668 CGGAATGACCTGAAACTTCACG 59.842 50.000 0.00 0.00 36.31 4.35
3819 4091 2.484264 GGAATGACCTGAAACTTCACGG 59.516 50.000 0.00 6.46 34.07 4.94
3820 4092 3.399330 GAATGACCTGAAACTTCACGGA 58.601 45.455 12.19 0.00 32.97 4.69
3821 4093 2.526304 TGACCTGAAACTTCACGGAG 57.474 50.000 12.19 0.00 32.97 4.63
3822 4094 2.036387 TGACCTGAAACTTCACGGAGA 58.964 47.619 12.19 0.00 32.97 3.71
3823 4095 2.632996 TGACCTGAAACTTCACGGAGAT 59.367 45.455 12.19 0.00 32.97 2.75
3824 4096 3.071023 TGACCTGAAACTTCACGGAGATT 59.929 43.478 12.19 0.00 32.97 2.40
3825 4097 4.282449 TGACCTGAAACTTCACGGAGATTA 59.718 41.667 12.19 0.00 32.97 1.75
3826 4098 5.046591 TGACCTGAAACTTCACGGAGATTAT 60.047 40.000 12.19 0.00 32.97 1.28
3827 4099 5.805728 ACCTGAAACTTCACGGAGATTATT 58.194 37.500 12.19 0.00 32.97 1.40
3828 4100 6.238648 ACCTGAAACTTCACGGAGATTATTT 58.761 36.000 12.19 0.00 32.97 1.40
3829 4101 6.715264 ACCTGAAACTTCACGGAGATTATTTT 59.285 34.615 12.19 0.00 32.97 1.82
3830 4102 7.230712 ACCTGAAACTTCACGGAGATTATTTTT 59.769 33.333 12.19 0.00 32.97 1.94
3831 4103 7.538678 CCTGAAACTTCACGGAGATTATTTTTG 59.461 37.037 0.00 0.00 32.90 2.44
3832 4104 7.367285 TGAAACTTCACGGAGATTATTTTTGG 58.633 34.615 0.00 0.00 31.01 3.28
3833 4105 7.229707 TGAAACTTCACGGAGATTATTTTTGGA 59.770 33.333 0.00 0.00 31.01 3.53
3834 4106 7.519032 AACTTCACGGAGATTATTTTTGGAA 57.481 32.000 0.00 0.00 0.00 3.53
3835 4107 7.519032 ACTTCACGGAGATTATTTTTGGAAA 57.481 32.000 0.00 0.00 0.00 3.13
3836 4108 7.947282 ACTTCACGGAGATTATTTTTGGAAAA 58.053 30.769 0.00 0.00 0.00 2.29
3837 4109 8.585018 ACTTCACGGAGATTATTTTTGGAAAAT 58.415 29.630 4.32 4.32 0.00 1.82
3865 4137 5.567138 AAATACTGGCGAAAGAATCAAGG 57.433 39.130 0.00 0.00 0.00 3.61
3866 4138 1.168714 ACTGGCGAAAGAATCAAGGC 58.831 50.000 0.00 0.00 0.00 4.35
3867 4139 0.453390 CTGGCGAAAGAATCAAGGCC 59.547 55.000 0.00 0.00 40.88 5.19
3868 4140 2.566824 GGCGAAAGAATCAAGGCCA 58.433 52.632 5.01 0.00 40.24 5.36
3869 4141 0.453390 GGCGAAAGAATCAAGGCCAG 59.547 55.000 5.01 0.00 40.24 4.85
3870 4142 0.453390 GCGAAAGAATCAAGGCCAGG 59.547 55.000 5.01 0.00 0.00 4.45
3871 4143 1.098050 CGAAAGAATCAAGGCCAGGG 58.902 55.000 5.01 0.00 0.00 4.45
3872 4144 1.478631 GAAAGAATCAAGGCCAGGGG 58.521 55.000 5.01 0.00 0.00 4.79
3873 4145 0.041684 AAAGAATCAAGGCCAGGGGG 59.958 55.000 5.01 0.00 37.18 5.40
3889 4161 4.660938 GGCCCACACCCTGTCCAC 62.661 72.222 0.00 0.00 0.00 4.02
3891 4163 3.238497 CCCACACCCTGTCCACGA 61.238 66.667 0.00 0.00 0.00 4.35
3892 4164 2.343758 CCACACCCTGTCCACGAG 59.656 66.667 0.00 0.00 0.00 4.18
3893 4165 2.343758 CACACCCTGTCCACGAGG 59.656 66.667 0.00 0.00 0.00 4.63
3940 4212 4.715130 CCCCTGGAGGTCCACCGA 62.715 72.222 0.00 0.00 42.01 4.69
3941 4213 3.391382 CCCTGGAGGTCCACCGAC 61.391 72.222 0.00 0.00 42.01 4.79
3949 4221 4.990288 GTCCACCGACCTCAACTC 57.010 61.111 0.00 0.00 32.40 3.01
3950 4222 1.292541 GTCCACCGACCTCAACTCC 59.707 63.158 0.00 0.00 32.40 3.85
3951 4223 1.152419 TCCACCGACCTCAACTCCA 60.152 57.895 0.00 0.00 0.00 3.86
3952 4224 0.761323 TCCACCGACCTCAACTCCAA 60.761 55.000 0.00 0.00 0.00 3.53
3953 4225 0.602905 CCACCGACCTCAACTCCAAC 60.603 60.000 0.00 0.00 0.00 3.77
3954 4226 0.393077 CACCGACCTCAACTCCAACT 59.607 55.000 0.00 0.00 0.00 3.16
3955 4227 1.129058 ACCGACCTCAACTCCAACTT 58.871 50.000 0.00 0.00 0.00 2.66
3956 4228 1.489230 ACCGACCTCAACTCCAACTTT 59.511 47.619 0.00 0.00 0.00 2.66
3957 4229 2.701951 ACCGACCTCAACTCCAACTTTA 59.298 45.455 0.00 0.00 0.00 1.85
3958 4230 3.326880 ACCGACCTCAACTCCAACTTTAT 59.673 43.478 0.00 0.00 0.00 1.40
3959 4231 4.529377 ACCGACCTCAACTCCAACTTTATA 59.471 41.667 0.00 0.00 0.00 0.98
3960 4232 5.189145 ACCGACCTCAACTCCAACTTTATAT 59.811 40.000 0.00 0.00 0.00 0.86
3961 4233 6.381994 ACCGACCTCAACTCCAACTTTATATA 59.618 38.462 0.00 0.00 0.00 0.86
3962 4234 7.070821 ACCGACCTCAACTCCAACTTTATATAT 59.929 37.037 0.00 0.00 0.00 0.86
3963 4235 7.931948 CCGACCTCAACTCCAACTTTATATATT 59.068 37.037 0.00 0.00 0.00 1.28
3964 4236 8.979574 CGACCTCAACTCCAACTTTATATATTC 58.020 37.037 0.00 0.00 0.00 1.75
3965 4237 8.888579 ACCTCAACTCCAACTTTATATATTCG 57.111 34.615 0.00 0.00 0.00 3.34
3966 4238 8.483758 ACCTCAACTCCAACTTTATATATTCGT 58.516 33.333 0.00 0.00 0.00 3.85
3967 4239 8.765219 CCTCAACTCCAACTTTATATATTCGTG 58.235 37.037 0.00 0.00 0.00 4.35
3968 4240 9.314321 CTCAACTCCAACTTTATATATTCGTGT 57.686 33.333 0.00 0.00 0.00 4.49
3969 4241 9.661563 TCAACTCCAACTTTATATATTCGTGTT 57.338 29.630 0.00 0.00 0.00 3.32
3970 4242 9.916397 CAACTCCAACTTTATATATTCGTGTTC 57.084 33.333 0.00 0.00 0.00 3.18
3971 4243 8.348983 ACTCCAACTTTATATATTCGTGTTCG 57.651 34.615 0.00 0.00 38.55 3.95
3972 4244 7.437267 ACTCCAACTTTATATATTCGTGTTCGG 59.563 37.037 0.00 0.00 37.69 4.30
3973 4245 6.702723 TCCAACTTTATATATTCGTGTTCGGG 59.297 38.462 0.00 0.00 37.69 5.14
3974 4246 6.073440 CCAACTTTATATATTCGTGTTCGGGG 60.073 42.308 0.00 0.00 37.69 5.73
3975 4247 6.409524 ACTTTATATATTCGTGTTCGGGGA 57.590 37.500 0.00 0.00 37.69 4.81
3976 4248 6.453092 ACTTTATATATTCGTGTTCGGGGAG 58.547 40.000 0.00 0.00 37.69 4.30
3977 4249 6.266103 ACTTTATATATTCGTGTTCGGGGAGA 59.734 38.462 0.00 0.00 37.69 3.71
3978 4250 6.653526 TTATATATTCGTGTTCGGGGAGAA 57.346 37.500 0.00 0.00 37.69 2.87
3979 4251 3.899052 ATATTCGTGTTCGGGGAGAAA 57.101 42.857 0.00 0.00 41.10 2.52
3980 4252 2.554370 ATTCGTGTTCGGGGAGAAAA 57.446 45.000 0.00 0.00 41.10 2.29
3981 4253 2.328819 TTCGTGTTCGGGGAGAAAAA 57.671 45.000 0.00 0.00 41.10 1.94
4012 4284 5.773239 GAAGGATTCATCACGTTTTACGA 57.227 39.130 6.19 0.00 44.67 3.43
4013 4285 6.345920 GAAGGATTCATCACGTTTTACGAT 57.654 37.500 6.19 0.00 44.67 3.73
4014 4286 7.459394 GAAGGATTCATCACGTTTTACGATA 57.541 36.000 6.19 0.00 44.67 2.92
4015 4287 6.823678 AGGATTCATCACGTTTTACGATAC 57.176 37.500 6.19 0.00 46.05 2.24
4016 4288 5.457799 AGGATTCATCACGTTTTACGATACG 59.542 40.000 6.19 0.00 46.05 3.06
4017 4289 5.332055 GGATTCATCACGTTTTACGATACGG 60.332 44.000 6.19 0.00 46.05 4.02
4018 4290 4.354071 TCATCACGTTTTACGATACGGA 57.646 40.909 6.19 0.00 46.05 4.69
4019 4291 4.345288 TCATCACGTTTTACGATACGGAG 58.655 43.478 6.19 0.00 46.05 4.63
4020 4292 2.518949 TCACGTTTTACGATACGGAGC 58.481 47.619 6.19 0.00 46.05 4.70
4021 4293 1.585214 CACGTTTTACGATACGGAGCC 59.415 52.381 6.19 0.00 46.05 4.70
4022 4294 0.841984 CGTTTTACGATACGGAGCCG 59.158 55.000 7.48 7.48 46.05 5.52
4023 4295 0.573987 GTTTTACGATACGGAGCCGC 59.426 55.000 9.14 0.00 44.19 6.53
4024 4296 0.528249 TTTTACGATACGGAGCCGCC 60.528 55.000 9.14 0.00 44.19 6.13
4038 4310 3.810896 CGCCGCCAAGCCCTAAAC 61.811 66.667 0.00 0.00 0.00 2.01
4039 4311 2.361230 GCCGCCAAGCCCTAAACT 60.361 61.111 0.00 0.00 0.00 2.66
4040 4312 2.407428 GCCGCCAAGCCCTAAACTC 61.407 63.158 0.00 0.00 0.00 3.01
4041 4313 1.299976 CCGCCAAGCCCTAAACTCT 59.700 57.895 0.00 0.00 0.00 3.24
4042 4314 0.744771 CCGCCAAGCCCTAAACTCTC 60.745 60.000 0.00 0.00 0.00 3.20
4043 4315 0.250513 CGCCAAGCCCTAAACTCTCT 59.749 55.000 0.00 0.00 0.00 3.10
4044 4316 1.740718 CGCCAAGCCCTAAACTCTCTC 60.741 57.143 0.00 0.00 0.00 3.20
4045 4317 1.740718 GCCAAGCCCTAAACTCTCTCG 60.741 57.143 0.00 0.00 0.00 4.04
4046 4318 1.134670 CCAAGCCCTAAACTCTCTCGG 60.135 57.143 0.00 0.00 0.00 4.63
4047 4319 1.134670 CAAGCCCTAAACTCTCTCGGG 60.135 57.143 0.00 0.00 37.97 5.14
4048 4320 0.335361 AGCCCTAAACTCTCTCGGGA 59.665 55.000 0.00 0.00 37.05 5.14
4049 4321 0.747852 GCCCTAAACTCTCTCGGGAG 59.252 60.000 5.75 5.75 40.73 4.30
4050 4322 1.404843 CCCTAAACTCTCTCGGGAGG 58.595 60.000 13.54 5.83 39.86 4.30
4051 4323 1.404843 CCTAAACTCTCTCGGGAGGG 58.595 60.000 11.71 11.71 45.20 4.30
4052 4324 0.747852 CTAAACTCTCTCGGGAGGGC 59.252 60.000 13.56 0.00 43.59 5.19
4053 4325 0.335361 TAAACTCTCTCGGGAGGGCT 59.665 55.000 13.56 0.00 43.59 5.19
4054 4326 1.261238 AAACTCTCTCGGGAGGGCTG 61.261 60.000 13.56 3.05 43.59 4.85
4055 4327 2.156496 AACTCTCTCGGGAGGGCTGA 62.156 60.000 13.56 0.00 43.59 4.26
4056 4328 1.152567 CTCTCTCGGGAGGGCTGAT 60.153 63.158 13.54 0.00 39.86 2.90
4057 4329 1.152652 TCTCTCGGGAGGGCTGATC 60.153 63.158 13.54 0.00 39.86 2.92
4058 4330 1.152567 CTCTCGGGAGGGCTGATCT 60.153 63.158 3.69 0.00 36.03 2.75
4059 4331 0.111446 CTCTCGGGAGGGCTGATCTA 59.889 60.000 3.69 0.00 36.03 1.98
4060 4332 0.111446 TCTCGGGAGGGCTGATCTAG 59.889 60.000 0.00 0.00 0.00 2.43
4061 4333 0.111446 CTCGGGAGGGCTGATCTAGA 59.889 60.000 0.00 0.00 0.00 2.43
4062 4334 0.111446 TCGGGAGGGCTGATCTAGAG 59.889 60.000 0.00 0.00 0.00 2.43
4063 4335 0.178975 CGGGAGGGCTGATCTAGAGT 60.179 60.000 0.00 0.00 0.00 3.24
4064 4336 1.627864 GGGAGGGCTGATCTAGAGTC 58.372 60.000 0.00 0.00 0.00 3.36
4065 4337 1.627864 GGAGGGCTGATCTAGAGTCC 58.372 60.000 0.00 0.00 0.00 3.85
4066 4338 1.243902 GAGGGCTGATCTAGAGTCCG 58.756 60.000 0.00 0.00 0.00 4.79
4067 4339 0.553819 AGGGCTGATCTAGAGTCCGT 59.446 55.000 0.00 0.00 0.00 4.69
4068 4340 1.063567 AGGGCTGATCTAGAGTCCGTT 60.064 52.381 0.00 0.00 0.00 4.44
4069 4341 1.338655 GGGCTGATCTAGAGTCCGTTC 59.661 57.143 0.00 0.00 0.00 3.95
4070 4342 1.002251 GGCTGATCTAGAGTCCGTTCG 60.002 57.143 0.00 0.00 0.00 3.95
4071 4343 1.002251 GCTGATCTAGAGTCCGTTCGG 60.002 57.143 4.74 4.74 0.00 4.30
4072 4344 1.604755 CTGATCTAGAGTCCGTTCGGG 59.395 57.143 11.37 0.00 37.02 5.14
4073 4345 0.953003 GATCTAGAGTCCGTTCGGGG 59.047 60.000 11.37 0.00 36.01 5.73
4074 4346 1.108132 ATCTAGAGTCCGTTCGGGGC 61.108 60.000 11.37 5.21 42.41 5.80
4079 4351 4.452733 GTCCGTTCGGGGCTCTGG 62.453 72.222 11.37 0.00 37.47 3.86
4080 4352 4.689549 TCCGTTCGGGGCTCTGGA 62.690 66.667 11.37 0.00 36.01 3.86
4081 4353 4.148825 CCGTTCGGGGCTCTGGAG 62.149 72.222 3.04 0.00 0.00 3.86
4082 4354 3.068691 CGTTCGGGGCTCTGGAGA 61.069 66.667 1.35 0.00 0.00 3.71
4083 4355 2.896443 GTTCGGGGCTCTGGAGAG 59.104 66.667 1.35 0.00 44.75 3.20
4084 4356 2.364317 TTCGGGGCTCTGGAGAGG 60.364 66.667 5.82 0.00 42.29 3.69
4085 4357 3.984186 TTCGGGGCTCTGGAGAGGG 62.984 68.421 5.82 0.00 42.29 4.30
4087 4359 4.095400 GGGGCTCTGGAGAGGGGA 62.095 72.222 5.82 0.00 42.29 4.81
4088 4360 2.041265 GGGCTCTGGAGAGGGGAA 59.959 66.667 5.82 0.00 42.29 3.97
4089 4361 1.385206 GGGCTCTGGAGAGGGGAAT 60.385 63.158 5.82 0.00 42.29 3.01
4090 4362 1.414866 GGGCTCTGGAGAGGGGAATC 61.415 65.000 5.82 0.00 42.29 2.52
4091 4363 1.414866 GGCTCTGGAGAGGGGAATCC 61.415 65.000 5.82 0.00 42.29 3.01
4092 4364 1.753368 GCTCTGGAGAGGGGAATCCG 61.753 65.000 5.82 0.00 42.29 4.18
4093 4365 0.397816 CTCTGGAGAGGGGAATCCGT 60.398 60.000 0.00 0.00 41.52 4.69
4094 4366 0.397254 TCTGGAGAGGGGAATCCGTC 60.397 60.000 0.00 0.00 45.60 4.79
4101 4373 2.661866 GGGAATCCGTCGCCATCG 60.662 66.667 0.00 0.00 33.06 3.84
4102 4374 2.106332 GGAATCCGTCGCCATCGT 59.894 61.111 0.00 0.00 36.96 3.73
4103 4375 1.949631 GGAATCCGTCGCCATCGTC 60.950 63.158 0.00 0.00 36.96 4.20
4104 4376 1.226859 GAATCCGTCGCCATCGTCA 60.227 57.895 0.00 0.00 36.96 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
128 136 7.855375 TGGGATAGAGATGAAATTGCCTATAG 58.145 38.462 0.00 0.00 0.00 1.31
134 142 5.319453 TCCATGGGATAGAGATGAAATTGC 58.681 41.667 13.02 0.00 0.00 3.56
153 161 6.251471 ACAATCTTTGACTCTGGAATTCCAT 58.749 36.000 27.20 13.29 46.46 3.41
163 171 3.005155 GGCAGCAAACAATCTTTGACTCT 59.995 43.478 0.00 0.00 0.00 3.24
167 175 2.694628 AGTGGCAGCAAACAATCTTTGA 59.305 40.909 0.00 0.00 0.00 2.69
198 209 4.265436 GAGCCCATCTCTCGATCTGTCG 62.265 59.091 0.00 0.00 39.47 4.35
262 273 6.332901 AGACAGATATAAATAGTTTGGGGGCT 59.667 38.462 0.00 0.00 0.00 5.19
282 293 2.551459 CTCAAAGGGCTTGTTCAGACAG 59.449 50.000 0.00 0.00 37.04 3.51
290 301 5.531287 CACTAACTAAACTCAAAGGGCTTGT 59.469 40.000 0.00 0.00 36.34 3.16
329 341 8.974238 CATAGTCATACGTTAGGGGGATTATTA 58.026 37.037 0.00 0.00 0.00 0.98
383 395 6.530019 AATTCTAAAACCTTGGCGAATCAT 57.470 33.333 0.00 0.00 0.00 2.45
458 470 4.797471 TCTAAATGAGTTGTGCATGCAAC 58.203 39.130 24.58 18.32 46.49 4.17
459 471 5.050644 CTCTAAATGAGTTGTGCATGCAA 57.949 39.130 24.58 10.26 37.99 4.08
460 472 4.690184 CTCTAAATGAGTTGTGCATGCA 57.310 40.909 18.46 18.46 37.99 3.96
618 724 8.891671 GTATGTCACGGGGATTAAATTAAGTA 57.108 34.615 0.00 0.00 0.00 2.24
635 741 3.432782 GTGGTAGCAGTACGTATGTCAC 58.567 50.000 0.00 0.00 0.00 3.67
645 751 3.329520 ACATTCTTTGGGTGGTAGCAGTA 59.670 43.478 0.00 0.00 0.00 2.74
646 752 2.108250 ACATTCTTTGGGTGGTAGCAGT 59.892 45.455 0.00 0.00 0.00 4.40
648 754 2.969821 ACATTCTTTGGGTGGTAGCA 57.030 45.000 0.00 0.00 0.00 3.49
649 755 4.038642 TGAAAACATTCTTTGGGTGGTAGC 59.961 41.667 0.00 0.00 0.00 3.58
723 868 2.660612 GCGTGTGGTTAACCGGACG 61.661 63.158 30.09 30.09 42.62 4.79
725 870 1.145598 TTGCGTGTGGTTAACCGGA 59.854 52.632 19.65 6.14 39.43 5.14
787 939 6.867816 GCAACTTGAAATTCATCAACCACATA 59.132 34.615 0.00 0.00 35.55 2.29
788 940 5.697633 GCAACTTGAAATTCATCAACCACAT 59.302 36.000 0.00 0.00 35.55 3.21
789 941 5.049167 GCAACTTGAAATTCATCAACCACA 58.951 37.500 0.00 0.00 35.55 4.17
790 942 5.049167 TGCAACTTGAAATTCATCAACCAC 58.951 37.500 0.00 0.00 35.55 4.16
791 943 5.273674 TGCAACTTGAAATTCATCAACCA 57.726 34.783 0.00 0.00 35.55 3.67
792 944 9.754382 ATATATGCAACTTGAAATTCATCAACC 57.246 29.630 0.00 0.00 35.55 3.77
851 1020 5.247110 AGTTTGATCCAGTCAGTCAGTACAT 59.753 40.000 0.00 0.00 38.29 2.29
856 1025 4.021632 TGAGAGTTTGATCCAGTCAGTCAG 60.022 45.833 0.00 0.00 38.29 3.51
880 1057 2.594592 GGAGCGGTGGTGCAAACT 60.595 61.111 0.00 0.00 37.31 2.66
881 1058 2.594592 AGGAGCGGTGGTGCAAAC 60.595 61.111 0.00 0.00 37.31 2.93
893 1080 4.382386 AGGAGAAGTATAGAGGAGGAGC 57.618 50.000 0.00 0.00 0.00 4.70
985 1177 6.686630 TCTTTGCCATGGTGTTTATAACTTG 58.313 36.000 14.67 0.00 0.00 3.16
986 1178 6.909550 TCTTTGCCATGGTGTTTATAACTT 57.090 33.333 14.67 0.00 0.00 2.66
987 1179 7.039082 ACAATCTTTGCCATGGTGTTTATAACT 60.039 33.333 14.67 0.00 0.00 2.24
988 1180 7.063308 CACAATCTTTGCCATGGTGTTTATAAC 59.937 37.037 14.67 0.00 0.00 1.89
989 1181 7.095910 CACAATCTTTGCCATGGTGTTTATAA 58.904 34.615 14.67 0.00 0.00 0.98
990 1182 6.629128 CACAATCTTTGCCATGGTGTTTATA 58.371 36.000 14.67 0.00 0.00 0.98
997 1197 1.547372 GAGCACAATCTTTGCCATGGT 59.453 47.619 14.67 0.00 41.18 3.55
1021 1221 2.270527 GGAGAGCAAGGGCAGGAC 59.729 66.667 0.00 0.00 44.61 3.85
1022 1222 3.011517 GGGAGAGCAAGGGCAGGA 61.012 66.667 0.00 0.00 44.61 3.86
1023 1223 3.013932 AGGGAGAGCAAGGGCAGG 61.014 66.667 0.00 0.00 44.61 4.85
1024 1224 2.271497 CAGGGAGAGCAAGGGCAG 59.729 66.667 0.00 0.00 44.61 4.85
1025 1225 4.039092 GCAGGGAGAGCAAGGGCA 62.039 66.667 0.00 0.00 44.61 5.36
1026 1226 3.726144 AGCAGGGAGAGCAAGGGC 61.726 66.667 0.00 0.00 41.61 5.19
1027 1227 2.271497 CAGCAGGGAGAGCAAGGG 59.729 66.667 0.00 0.00 0.00 3.95
1028 1228 2.438075 GCAGCAGGGAGAGCAAGG 60.438 66.667 0.00 0.00 0.00 3.61
1029 1229 1.745864 CAGCAGCAGGGAGAGCAAG 60.746 63.158 0.00 0.00 0.00 4.01
1030 1230 2.350134 CAGCAGCAGGGAGAGCAA 59.650 61.111 0.00 0.00 0.00 3.91
1031 1231 4.405671 GCAGCAGCAGGGAGAGCA 62.406 66.667 0.00 0.00 41.58 4.26
1542 1745 1.738099 CGCAAAGTCGAGGGTCTGG 60.738 63.158 0.00 0.00 0.00 3.86
1628 1831 1.365368 GAAGAGCGCCTTGAGCTTCC 61.365 60.000 14.63 0.00 46.13 3.46
1659 1862 1.493861 TGGAGAAGAGGATGGCTCAG 58.506 55.000 0.00 0.00 0.00 3.35
1666 1869 4.735369 ACACGATAGATGGAGAAGAGGAT 58.265 43.478 0.00 0.00 41.38 3.24
1667 1870 4.171878 ACACGATAGATGGAGAAGAGGA 57.828 45.455 0.00 0.00 41.38 3.71
1686 1895 3.061322 CAAGTTGAATTCGACCGGTACA 58.939 45.455 20.21 0.00 0.00 2.90
1687 1896 3.319755 TCAAGTTGAATTCGACCGGTAC 58.680 45.455 20.21 0.00 0.00 3.34
1688 1897 3.663995 TCAAGTTGAATTCGACCGGTA 57.336 42.857 20.21 0.00 0.00 4.02
1689 1898 2.536761 TCAAGTTGAATTCGACCGGT 57.463 45.000 20.21 6.92 0.00 5.28
1701 1920 3.044986 CAAGCACGACCAATTCAAGTTG 58.955 45.455 0.00 0.00 0.00 3.16
1900 2132 1.372087 GCTGAAGCGGGTCCATGAAG 61.372 60.000 0.00 0.00 0.00 3.02
1901 2133 1.377202 GCTGAAGCGGGTCCATGAA 60.377 57.895 0.00 0.00 0.00 2.57
1902 2134 2.268920 GCTGAAGCGGGTCCATGA 59.731 61.111 0.00 0.00 0.00 3.07
1967 2199 7.443302 TGAATCTAGTTCCTGGATCTCAAAT 57.557 36.000 10.48 1.62 35.91 2.32
2018 2250 9.739786 GTTGAAATAGTTGTTTGTTTGAACTTG 57.260 29.630 0.00 0.00 32.27 3.16
2021 2253 9.134734 TGAGTTGAAATAGTTGTTTGTTTGAAC 57.865 29.630 0.00 0.00 31.00 3.18
2024 2256 7.489113 AGCTGAGTTGAAATAGTTGTTTGTTTG 59.511 33.333 0.00 0.00 0.00 2.93
2031 2263 5.300286 AGCAAAGCTGAGTTGAAATAGTTGT 59.700 36.000 0.71 0.00 37.57 3.32
2053 2285 2.121116 TGTAGATTCGCTTCGCTAGC 57.879 50.000 4.06 4.06 46.83 3.42
2085 2317 7.093771 GGTCCTGTTTGGTTCAGATTTGATATT 60.094 37.037 0.00 0.00 35.20 1.28
2087 2319 5.710099 GGTCCTGTTTGGTTCAGATTTGATA 59.290 40.000 0.00 0.00 35.20 2.15
2094 2326 0.534203 GCGGTCCTGTTTGGTTCAGA 60.534 55.000 0.00 0.00 35.20 3.27
2100 2332 2.328099 GCTCTGCGGTCCTGTTTGG 61.328 63.158 0.00 0.00 37.10 3.28
2114 2346 0.890542 TCATTGGCAAAGTGCGCTCT 60.891 50.000 9.73 7.80 46.21 4.09
2117 2349 1.620413 GCTTCATTGGCAAAGTGCGC 61.620 55.000 3.01 0.00 46.21 6.09
2118 2350 0.318869 TGCTTCATTGGCAAAGTGCG 60.319 50.000 3.01 0.00 46.21 5.34
2130 2362 7.211573 TCAAATTGTCTGTGAATTTGCTTCAT 58.788 30.769 15.70 0.00 45.36 2.57
2141 2373 4.892345 TGGTTGGATTCAAATTGTCTGTGA 59.108 37.500 0.00 0.00 34.28 3.58
2146 2378 5.178067 CAGCTTTGGTTGGATTCAAATTGTC 59.822 40.000 0.00 0.00 34.28 3.18
2162 2394 1.269936 CCCTGCTTGTTTCAGCTTTGG 60.270 52.381 0.00 0.00 40.79 3.28
2190 2441 9.945633 ATACTCTAGAAAGAAATCTTCTACCCT 57.054 33.333 0.00 0.00 39.61 4.34
2222 2473 8.600449 TCAACATCGGCAAAAAGAATAAAAAT 57.400 26.923 0.00 0.00 0.00 1.82
2223 2474 7.923344 TCTCAACATCGGCAAAAAGAATAAAAA 59.077 29.630 0.00 0.00 0.00 1.94
2228 2480 4.761739 TCTCTCAACATCGGCAAAAAGAAT 59.238 37.500 0.00 0.00 0.00 2.40
2239 2491 5.748592 TCATATGTACGTCTCTCAACATCG 58.251 41.667 1.90 0.00 34.54 3.84
2265 2517 8.624776 AGCCAATGTAAAGCTTCTATTATTGTC 58.375 33.333 0.00 0.00 31.27 3.18
2284 2536 6.932356 TTTTCTATAGCAGAGAAGCCAATG 57.068 37.500 0.00 0.00 34.50 2.82
2285 2537 7.285566 TCATTTTCTATAGCAGAGAAGCCAAT 58.714 34.615 0.00 0.00 34.50 3.16
2294 2546 4.270084 CGCGGTTTCATTTTCTATAGCAGA 59.730 41.667 0.00 0.00 0.00 4.26
2302 2554 1.000717 CCCAACGCGGTTTCATTTTCT 60.001 47.619 12.47 0.00 0.00 2.52
2475 2728 1.131638 TCTCTTGGAACCTGCAGTGT 58.868 50.000 13.81 7.51 0.00 3.55
2709 2965 2.290577 CCCACCTCTTTTTCCTCTCCTG 60.291 54.545 0.00 0.00 0.00 3.86
2851 3107 2.238646 ACACAAGTTCTTGGACTGTCCA 59.761 45.455 25.12 25.12 46.61 4.02
3231 3488 2.736144 AGTGCTCATTTTGCCACATG 57.264 45.000 0.00 0.00 0.00 3.21
3375 3632 3.678056 AGACGCACCTTGACATTTCTA 57.322 42.857 0.00 0.00 0.00 2.10
3562 3819 5.630121 ACTTAACTTGATCATCCAACACCA 58.370 37.500 0.00 0.00 0.00 4.17
3614 3886 2.746279 TATTCGCAACATCCCCCAAT 57.254 45.000 0.00 0.00 0.00 3.16
3655 3927 4.095483 TGGAAAAGTAGATACGACGGAGAC 59.905 45.833 0.00 0.00 0.00 3.36
3656 3928 4.264253 TGGAAAAGTAGATACGACGGAGA 58.736 43.478 0.00 0.00 0.00 3.71
3657 3929 4.627611 TGGAAAAGTAGATACGACGGAG 57.372 45.455 0.00 0.00 0.00 4.63
3658 3930 5.163513 GTTTGGAAAAGTAGATACGACGGA 58.836 41.667 0.00 0.00 0.00 4.69
3659 3931 4.925054 TGTTTGGAAAAGTAGATACGACGG 59.075 41.667 0.00 0.00 0.00 4.79
3660 3932 5.632347 AGTGTTTGGAAAAGTAGATACGACG 59.368 40.000 0.00 0.00 0.00 5.12
3661 3933 7.417496 AAGTGTTTGGAAAAGTAGATACGAC 57.583 36.000 0.00 0.00 0.00 4.34
3662 3934 8.339714 CAAAAGTGTTTGGAAAAGTAGATACGA 58.660 33.333 0.00 0.00 40.47 3.43
3663 3935 7.112984 GCAAAAGTGTTTGGAAAAGTAGATACG 59.887 37.037 1.72 0.00 43.73 3.06
3664 3936 7.381408 GGCAAAAGTGTTTGGAAAAGTAGATAC 59.619 37.037 1.72 0.00 43.73 2.24
3665 3937 7.430441 GGCAAAAGTGTTTGGAAAAGTAGATA 58.570 34.615 1.72 0.00 43.73 1.98
3666 3938 6.280643 GGCAAAAGTGTTTGGAAAAGTAGAT 58.719 36.000 1.72 0.00 43.73 1.98
3667 3939 5.394773 GGGCAAAAGTGTTTGGAAAAGTAGA 60.395 40.000 1.72 0.00 43.73 2.59
3668 3940 4.808895 GGGCAAAAGTGTTTGGAAAAGTAG 59.191 41.667 1.72 0.00 43.73 2.57
3669 3941 4.468153 AGGGCAAAAGTGTTTGGAAAAGTA 59.532 37.500 1.72 0.00 43.73 2.24
3670 3942 3.263170 AGGGCAAAAGTGTTTGGAAAAGT 59.737 39.130 1.72 0.00 43.73 2.66
3671 3943 3.872696 AGGGCAAAAGTGTTTGGAAAAG 58.127 40.909 1.72 0.00 43.73 2.27
3672 3944 3.990959 AGGGCAAAAGTGTTTGGAAAA 57.009 38.095 1.72 0.00 43.73 2.29
3673 3945 3.008485 ACAAGGGCAAAAGTGTTTGGAAA 59.992 39.130 1.72 0.00 43.73 3.13
3674 3946 2.569404 ACAAGGGCAAAAGTGTTTGGAA 59.431 40.909 1.72 0.00 43.73 3.53
3675 3947 2.183679 ACAAGGGCAAAAGTGTTTGGA 58.816 42.857 1.72 0.00 43.73 3.53
3676 3948 2.689553 ACAAGGGCAAAAGTGTTTGG 57.310 45.000 1.72 0.00 43.73 3.28
3677 3949 4.379290 CCAAAACAAGGGCAAAAGTGTTTG 60.379 41.667 1.73 0.00 41.94 2.93
3678 3950 3.755905 CCAAAACAAGGGCAAAAGTGTTT 59.244 39.130 0.00 0.00 44.01 2.83
3679 3951 3.008485 TCCAAAACAAGGGCAAAAGTGTT 59.992 39.130 0.00 0.00 35.77 3.32
3680 3952 2.569404 TCCAAAACAAGGGCAAAAGTGT 59.431 40.909 0.00 0.00 0.00 3.55
3681 3953 2.935849 GTCCAAAACAAGGGCAAAAGTG 59.064 45.455 0.00 0.00 0.00 3.16
3682 3954 2.837591 AGTCCAAAACAAGGGCAAAAGT 59.162 40.909 0.00 0.00 31.65 2.66
3683 3955 3.132824 AGAGTCCAAAACAAGGGCAAAAG 59.867 43.478 0.00 0.00 31.65 2.27
3684 3956 3.103742 AGAGTCCAAAACAAGGGCAAAA 58.896 40.909 0.00 0.00 31.65 2.44
3685 3957 2.745968 AGAGTCCAAAACAAGGGCAAA 58.254 42.857 0.00 0.00 31.65 3.68
3686 3958 2.452600 AGAGTCCAAAACAAGGGCAA 57.547 45.000 0.00 0.00 31.65 4.52
3687 3959 3.117663 AGTTAGAGTCCAAAACAAGGGCA 60.118 43.478 0.00 0.00 31.65 5.36
3688 3960 3.487372 AGTTAGAGTCCAAAACAAGGGC 58.513 45.455 4.12 0.00 0.00 5.19
3689 3961 4.261614 GCAAGTTAGAGTCCAAAACAAGGG 60.262 45.833 4.12 0.00 0.00 3.95
3690 3962 4.338118 TGCAAGTTAGAGTCCAAAACAAGG 59.662 41.667 0.00 0.00 0.00 3.61
3691 3963 5.499139 TGCAAGTTAGAGTCCAAAACAAG 57.501 39.130 0.00 0.00 0.00 3.16
3692 3964 5.592282 TCATGCAAGTTAGAGTCCAAAACAA 59.408 36.000 0.00 0.00 0.00 2.83
3693 3965 5.129634 TCATGCAAGTTAGAGTCCAAAACA 58.870 37.500 0.00 0.00 0.00 2.83
3694 3966 5.689383 TCATGCAAGTTAGAGTCCAAAAC 57.311 39.130 0.00 0.00 0.00 2.43
3695 3967 6.899393 AATCATGCAAGTTAGAGTCCAAAA 57.101 33.333 0.00 0.00 0.00 2.44
3696 3968 6.489700 TCAAATCATGCAAGTTAGAGTCCAAA 59.510 34.615 0.00 0.00 0.00 3.28
3697 3969 6.003326 TCAAATCATGCAAGTTAGAGTCCAA 58.997 36.000 0.00 0.00 0.00 3.53
3698 3970 5.559770 TCAAATCATGCAAGTTAGAGTCCA 58.440 37.500 0.00 0.00 0.00 4.02
3699 3971 6.500684 TTCAAATCATGCAAGTTAGAGTCC 57.499 37.500 0.00 0.00 0.00 3.85
3700 3972 6.971184 CCATTCAAATCATGCAAGTTAGAGTC 59.029 38.462 0.00 0.00 0.00 3.36
3701 3973 6.660521 TCCATTCAAATCATGCAAGTTAGAGT 59.339 34.615 0.00 0.00 0.00 3.24
3702 3974 7.092137 TCCATTCAAATCATGCAAGTTAGAG 57.908 36.000 0.00 0.00 0.00 2.43
3703 3975 7.177216 AGTTCCATTCAAATCATGCAAGTTAGA 59.823 33.333 0.00 0.00 0.00 2.10
3704 3976 7.318141 AGTTCCATTCAAATCATGCAAGTTAG 58.682 34.615 0.00 0.00 0.00 2.34
3705 3977 7.230849 AGTTCCATTCAAATCATGCAAGTTA 57.769 32.000 0.00 0.00 0.00 2.24
3706 3978 6.105397 AGTTCCATTCAAATCATGCAAGTT 57.895 33.333 0.00 0.00 0.00 2.66
3707 3979 5.733620 AGTTCCATTCAAATCATGCAAGT 57.266 34.783 0.00 0.00 0.00 3.16
3708 3980 7.318141 AGTTAGTTCCATTCAAATCATGCAAG 58.682 34.615 0.00 0.00 0.00 4.01
3709 3981 7.230849 AGTTAGTTCCATTCAAATCATGCAA 57.769 32.000 0.00 0.00 0.00 4.08
3710 3982 6.839124 AGTTAGTTCCATTCAAATCATGCA 57.161 33.333 0.00 0.00 0.00 3.96
3711 3983 6.532657 CCAAGTTAGTTCCATTCAAATCATGC 59.467 38.462 0.00 0.00 0.00 4.06
3712 3984 7.756722 GTCCAAGTTAGTTCCATTCAAATCATG 59.243 37.037 0.00 0.00 0.00 3.07
3713 3985 7.671398 AGTCCAAGTTAGTTCCATTCAAATCAT 59.329 33.333 0.00 0.00 0.00 2.45
3714 3986 7.004086 AGTCCAAGTTAGTTCCATTCAAATCA 58.996 34.615 0.00 0.00 0.00 2.57
3715 3987 7.174946 TCAGTCCAAGTTAGTTCCATTCAAATC 59.825 37.037 0.00 0.00 0.00 2.17
3716 3988 7.004086 TCAGTCCAAGTTAGTTCCATTCAAAT 58.996 34.615 0.00 0.00 0.00 2.32
3717 3989 6.262273 GTCAGTCCAAGTTAGTTCCATTCAAA 59.738 38.462 0.00 0.00 0.00 2.69
3718 3990 5.763204 GTCAGTCCAAGTTAGTTCCATTCAA 59.237 40.000 0.00 0.00 0.00 2.69
3719 3991 5.305585 GTCAGTCCAAGTTAGTTCCATTCA 58.694 41.667 0.00 0.00 0.00 2.57
3720 3992 4.389077 CGTCAGTCCAAGTTAGTTCCATTC 59.611 45.833 0.00 0.00 0.00 2.67
3721 3993 4.315803 CGTCAGTCCAAGTTAGTTCCATT 58.684 43.478 0.00 0.00 0.00 3.16
3722 3994 3.864921 GCGTCAGTCCAAGTTAGTTCCAT 60.865 47.826 0.00 0.00 0.00 3.41
3723 3995 2.547218 GCGTCAGTCCAAGTTAGTTCCA 60.547 50.000 0.00 0.00 0.00 3.53
3724 3996 2.067013 GCGTCAGTCCAAGTTAGTTCC 58.933 52.381 0.00 0.00 0.00 3.62
3725 3997 2.731976 CAGCGTCAGTCCAAGTTAGTTC 59.268 50.000 0.00 0.00 0.00 3.01
3726 3998 2.102588 ACAGCGTCAGTCCAAGTTAGTT 59.897 45.455 0.00 0.00 0.00 2.24
3727 3999 1.687123 ACAGCGTCAGTCCAAGTTAGT 59.313 47.619 0.00 0.00 0.00 2.24
3728 4000 2.440539 ACAGCGTCAGTCCAAGTTAG 57.559 50.000 0.00 0.00 0.00 2.34
3729 4001 2.902705 AACAGCGTCAGTCCAAGTTA 57.097 45.000 0.00 0.00 0.00 2.24
3730 4002 2.038387 AAACAGCGTCAGTCCAAGTT 57.962 45.000 0.00 0.00 0.00 2.66
3731 4003 2.038387 AAAACAGCGTCAGTCCAAGT 57.962 45.000 0.00 0.00 0.00 3.16
3732 4004 3.607078 GCTAAAAACAGCGTCAGTCCAAG 60.607 47.826 0.00 0.00 0.00 3.61
3733 4005 2.289547 GCTAAAAACAGCGTCAGTCCAA 59.710 45.455 0.00 0.00 0.00 3.53
3734 4006 1.871039 GCTAAAAACAGCGTCAGTCCA 59.129 47.619 0.00 0.00 0.00 4.02
3735 4007 1.871039 TGCTAAAAACAGCGTCAGTCC 59.129 47.619 0.00 0.00 44.88 3.85
3736 4008 2.800544 TCTGCTAAAAACAGCGTCAGTC 59.199 45.455 0.00 0.00 44.88 3.51
3737 4009 2.833794 TCTGCTAAAAACAGCGTCAGT 58.166 42.857 0.00 0.00 44.88 3.41
3738 4010 3.878086 TTCTGCTAAAAACAGCGTCAG 57.122 42.857 0.00 0.00 44.88 3.51
3739 4011 4.536065 CAATTCTGCTAAAAACAGCGTCA 58.464 39.130 0.00 0.00 44.88 4.35
3740 4012 3.361940 GCAATTCTGCTAAAAACAGCGTC 59.638 43.478 0.00 0.00 45.74 5.19
3741 4013 3.308530 GCAATTCTGCTAAAAACAGCGT 58.691 40.909 0.00 0.00 45.74 5.07
3742 4014 3.959609 GCAATTCTGCTAAAAACAGCG 57.040 42.857 0.00 0.00 45.74 5.18
3754 4026 5.587388 AAGATAACACCATGGCAATTCTG 57.413 39.130 13.04 3.66 0.00 3.02
3755 4027 5.481473 ACAAAGATAACACCATGGCAATTCT 59.519 36.000 13.04 5.33 0.00 2.40
3756 4028 5.577945 CACAAAGATAACACCATGGCAATTC 59.422 40.000 13.04 2.86 0.00 2.17
3757 4029 5.481105 CACAAAGATAACACCATGGCAATT 58.519 37.500 13.04 6.30 0.00 2.32
3758 4030 4.621274 GCACAAAGATAACACCATGGCAAT 60.621 41.667 13.04 0.00 0.00 3.56
3759 4031 3.305950 GCACAAAGATAACACCATGGCAA 60.306 43.478 13.04 0.00 0.00 4.52
3760 4032 2.230992 GCACAAAGATAACACCATGGCA 59.769 45.455 13.04 0.00 0.00 4.92
3761 4033 2.230992 TGCACAAAGATAACACCATGGC 59.769 45.455 13.04 0.00 0.00 4.40
3762 4034 3.758023 TCTGCACAAAGATAACACCATGG 59.242 43.478 11.19 11.19 0.00 3.66
3763 4035 5.375417 TTCTGCACAAAGATAACACCATG 57.625 39.130 0.00 0.00 0.00 3.66
3764 4036 5.301551 TGTTTCTGCACAAAGATAACACCAT 59.698 36.000 0.00 0.00 29.87 3.55
3765 4037 4.642437 TGTTTCTGCACAAAGATAACACCA 59.358 37.500 0.00 0.00 29.87 4.17
3766 4038 5.181690 TGTTTCTGCACAAAGATAACACC 57.818 39.130 0.00 0.00 29.87 4.16
3767 4039 7.275560 ACTTTTGTTTCTGCACAAAGATAACAC 59.724 33.333 1.17 0.00 45.21 3.32
3768 4040 7.319646 ACTTTTGTTTCTGCACAAAGATAACA 58.680 30.769 1.17 0.00 45.21 2.41
3769 4041 7.755582 ACTTTTGTTTCTGCACAAAGATAAC 57.244 32.000 1.17 0.00 45.21 1.89
3770 4042 8.250332 AGAACTTTTGTTTCTGCACAAAGATAA 58.750 29.630 1.17 0.00 45.21 1.75
3771 4043 7.771183 AGAACTTTTGTTTCTGCACAAAGATA 58.229 30.769 1.17 0.00 45.21 1.98
3772 4044 6.633856 AGAACTTTTGTTTCTGCACAAAGAT 58.366 32.000 1.17 0.00 45.21 2.40
3773 4045 6.024552 AGAACTTTTGTTTCTGCACAAAGA 57.975 33.333 1.17 0.00 45.21 2.52
3774 4046 5.003778 CGAGAACTTTTGTTTCTGCACAAAG 59.996 40.000 1.17 0.00 45.21 2.77
3775 4047 4.856487 CGAGAACTTTTGTTTCTGCACAAA 59.144 37.500 0.00 0.00 43.42 2.83
3776 4048 4.411327 CGAGAACTTTTGTTTCTGCACAA 58.589 39.130 0.00 0.00 43.66 3.33
3777 4049 3.181501 CCGAGAACTTTTGTTTCTGCACA 60.182 43.478 0.00 0.00 43.66 4.57
3778 4050 3.064820 TCCGAGAACTTTTGTTTCTGCAC 59.935 43.478 0.00 0.00 43.66 4.57
3779 4051 3.275143 TCCGAGAACTTTTGTTTCTGCA 58.725 40.909 0.00 0.00 43.66 4.41
3780 4052 3.963383 TCCGAGAACTTTTGTTTCTGC 57.037 42.857 0.00 0.00 43.66 4.26
3781 4053 5.909610 GTCATTCCGAGAACTTTTGTTTCTG 59.090 40.000 0.00 0.00 43.66 3.02
3782 4054 5.008712 GGTCATTCCGAGAACTTTTGTTTCT 59.991 40.000 0.00 0.00 43.66 2.52
3783 4055 5.008712 AGGTCATTCCGAGAACTTTTGTTTC 59.991 40.000 0.00 0.00 41.30 2.78
3784 4056 4.887655 AGGTCATTCCGAGAACTTTTGTTT 59.112 37.500 0.00 0.00 41.30 2.83
3785 4057 4.275936 CAGGTCATTCCGAGAACTTTTGTT 59.724 41.667 0.00 0.00 42.83 2.83
3786 4058 3.815401 CAGGTCATTCCGAGAACTTTTGT 59.185 43.478 0.00 0.00 41.99 2.83
3787 4059 4.065088 TCAGGTCATTCCGAGAACTTTTG 58.935 43.478 0.00 0.00 41.99 2.44
3788 4060 4.351874 TCAGGTCATTCCGAGAACTTTT 57.648 40.909 0.00 0.00 41.99 2.27
3789 4061 4.351874 TTCAGGTCATTCCGAGAACTTT 57.648 40.909 0.00 0.00 41.99 2.66
3790 4062 4.065789 GTTTCAGGTCATTCCGAGAACTT 58.934 43.478 0.00 0.00 41.99 2.66
3791 4063 3.325135 AGTTTCAGGTCATTCCGAGAACT 59.675 43.478 0.00 0.00 41.99 3.01
3792 4064 3.665190 AGTTTCAGGTCATTCCGAGAAC 58.335 45.455 0.00 0.00 41.99 3.01
3793 4065 4.202315 TGAAGTTTCAGGTCATTCCGAGAA 60.202 41.667 0.00 0.00 41.99 2.87
3794 4066 3.323691 TGAAGTTTCAGGTCATTCCGAGA 59.676 43.478 0.00 0.00 41.99 4.04
3795 4067 3.433615 GTGAAGTTTCAGGTCATTCCGAG 59.566 47.826 0.00 0.00 41.99 4.63
3796 4068 3.399330 GTGAAGTTTCAGGTCATTCCGA 58.601 45.455 0.00 0.00 41.99 4.55
3797 4069 2.157668 CGTGAAGTTTCAGGTCATTCCG 59.842 50.000 6.44 0.00 41.99 4.30
3798 4070 2.484264 CCGTGAAGTTTCAGGTCATTCC 59.516 50.000 12.06 0.00 40.44 3.01
3799 4071 3.399330 TCCGTGAAGTTTCAGGTCATTC 58.601 45.455 12.06 0.00 40.44 2.67
3800 4072 3.071023 TCTCCGTGAAGTTTCAGGTCATT 59.929 43.478 12.06 0.00 40.44 2.57
3801 4073 2.632996 TCTCCGTGAAGTTTCAGGTCAT 59.367 45.455 12.06 0.00 40.44 3.06
3802 4074 2.036387 TCTCCGTGAAGTTTCAGGTCA 58.964 47.619 12.06 0.54 40.44 4.02
3803 4075 2.814280 TCTCCGTGAAGTTTCAGGTC 57.186 50.000 12.06 0.00 40.44 3.85
3804 4076 3.771577 AATCTCCGTGAAGTTTCAGGT 57.228 42.857 12.06 0.00 40.44 4.00
3805 4077 6.743575 AAATAATCTCCGTGAAGTTTCAGG 57.256 37.500 7.41 7.41 41.39 3.86
3806 4078 7.538678 CCAAAAATAATCTCCGTGAAGTTTCAG 59.461 37.037 0.00 0.00 37.98 3.02
3807 4079 7.229707 TCCAAAAATAATCTCCGTGAAGTTTCA 59.770 33.333 0.00 0.00 34.20 2.69
3808 4080 7.590279 TCCAAAAATAATCTCCGTGAAGTTTC 58.410 34.615 0.00 0.00 0.00 2.78
3809 4081 7.519032 TCCAAAAATAATCTCCGTGAAGTTT 57.481 32.000 0.00 0.00 0.00 2.66
3810 4082 7.519032 TTCCAAAAATAATCTCCGTGAAGTT 57.481 32.000 0.00 0.00 0.00 2.66
3811 4083 7.519032 TTTCCAAAAATAATCTCCGTGAAGT 57.481 32.000 0.00 0.00 0.00 3.01
3812 4084 8.986477 ATTTTCCAAAAATAATCTCCGTGAAG 57.014 30.769 0.00 0.00 0.00 3.02
3841 4113 6.389906 CCTTGATTCTTTCGCCAGTATTTTT 58.610 36.000 0.00 0.00 0.00 1.94
3842 4114 5.622233 GCCTTGATTCTTTCGCCAGTATTTT 60.622 40.000 0.00 0.00 0.00 1.82
3843 4115 4.142381 GCCTTGATTCTTTCGCCAGTATTT 60.142 41.667 0.00 0.00 0.00 1.40
3844 4116 3.378427 GCCTTGATTCTTTCGCCAGTATT 59.622 43.478 0.00 0.00 0.00 1.89
3845 4117 2.945668 GCCTTGATTCTTTCGCCAGTAT 59.054 45.455 0.00 0.00 0.00 2.12
3846 4118 2.356135 GCCTTGATTCTTTCGCCAGTA 58.644 47.619 0.00 0.00 0.00 2.74
3847 4119 1.168714 GCCTTGATTCTTTCGCCAGT 58.831 50.000 0.00 0.00 0.00 4.00
3848 4120 0.453390 GGCCTTGATTCTTTCGCCAG 59.547 55.000 0.00 0.00 36.38 4.85
3849 4121 0.251121 TGGCCTTGATTCTTTCGCCA 60.251 50.000 3.32 0.00 43.84 5.69
3850 4122 0.453390 CTGGCCTTGATTCTTTCGCC 59.547 55.000 3.32 0.00 36.91 5.54
3851 4123 0.453390 CCTGGCCTTGATTCTTTCGC 59.547 55.000 3.32 0.00 0.00 4.70
3852 4124 1.098050 CCCTGGCCTTGATTCTTTCG 58.902 55.000 3.32 0.00 0.00 3.46
3853 4125 1.478631 CCCCTGGCCTTGATTCTTTC 58.521 55.000 3.32 0.00 0.00 2.62
3854 4126 0.041684 CCCCCTGGCCTTGATTCTTT 59.958 55.000 3.32 0.00 0.00 2.52
3855 4127 1.699752 CCCCCTGGCCTTGATTCTT 59.300 57.895 3.32 0.00 0.00 2.52
3856 4128 3.431658 CCCCCTGGCCTTGATTCT 58.568 61.111 3.32 0.00 0.00 2.40
3872 4144 4.660938 GTGGACAGGGTGTGGGCC 62.661 72.222 0.00 0.00 0.00 5.80
3874 4146 3.238497 TCGTGGACAGGGTGTGGG 61.238 66.667 0.00 0.00 0.00 4.61
3875 4147 2.343758 CTCGTGGACAGGGTGTGG 59.656 66.667 0.00 0.00 0.00 4.17
3876 4148 2.343758 CCTCGTGGACAGGGTGTG 59.656 66.667 0.00 0.00 34.57 3.82
3877 4149 2.923035 CCCTCGTGGACAGGGTGT 60.923 66.667 4.76 0.00 45.35 4.16
3932 4204 1.292541 GGAGTTGAGGTCGGTGGAC 59.707 63.158 0.00 0.00 42.66 4.02
3933 4205 0.761323 TTGGAGTTGAGGTCGGTGGA 60.761 55.000 0.00 0.00 0.00 4.02
3934 4206 0.602905 GTTGGAGTTGAGGTCGGTGG 60.603 60.000 0.00 0.00 0.00 4.61
3935 4207 0.393077 AGTTGGAGTTGAGGTCGGTG 59.607 55.000 0.00 0.00 0.00 4.94
3936 4208 1.129058 AAGTTGGAGTTGAGGTCGGT 58.871 50.000 0.00 0.00 0.00 4.69
3937 4209 2.256117 AAAGTTGGAGTTGAGGTCGG 57.744 50.000 0.00 0.00 0.00 4.79
3938 4210 8.888579 AATATATAAAGTTGGAGTTGAGGTCG 57.111 34.615 0.00 0.00 0.00 4.79
3939 4211 8.979574 CGAATATATAAAGTTGGAGTTGAGGTC 58.020 37.037 0.00 0.00 0.00 3.85
3940 4212 8.483758 ACGAATATATAAAGTTGGAGTTGAGGT 58.516 33.333 0.00 0.00 0.00 3.85
3941 4213 8.765219 CACGAATATATAAAGTTGGAGTTGAGG 58.235 37.037 0.00 0.00 0.00 3.86
3942 4214 9.314321 ACACGAATATATAAAGTTGGAGTTGAG 57.686 33.333 0.00 0.00 0.00 3.02
3943 4215 9.661563 AACACGAATATATAAAGTTGGAGTTGA 57.338 29.630 0.00 0.00 0.00 3.18
3944 4216 9.916397 GAACACGAATATATAAAGTTGGAGTTG 57.084 33.333 0.00 0.00 0.00 3.16
3945 4217 8.814235 CGAACACGAATATATAAAGTTGGAGTT 58.186 33.333 0.00 0.00 0.00 3.01
3946 4218 7.437267 CCGAACACGAATATATAAAGTTGGAGT 59.563 37.037 0.00 0.00 0.00 3.85
3947 4219 7.095774 CCCGAACACGAATATATAAAGTTGGAG 60.096 40.741 0.00 0.00 0.00 3.86
3948 4220 6.702723 CCCGAACACGAATATATAAAGTTGGA 59.297 38.462 0.00 0.00 0.00 3.53
3949 4221 6.073440 CCCCGAACACGAATATATAAAGTTGG 60.073 42.308 0.00 0.00 0.00 3.77
3950 4222 6.702723 TCCCCGAACACGAATATATAAAGTTG 59.297 38.462 0.00 0.00 0.00 3.16
3951 4223 6.819284 TCCCCGAACACGAATATATAAAGTT 58.181 36.000 0.00 0.00 0.00 2.66
3952 4224 6.266103 TCTCCCCGAACACGAATATATAAAGT 59.734 38.462 0.00 0.00 0.00 2.66
3953 4225 6.684686 TCTCCCCGAACACGAATATATAAAG 58.315 40.000 0.00 0.00 0.00 1.85
3954 4226 6.653526 TCTCCCCGAACACGAATATATAAA 57.346 37.500 0.00 0.00 0.00 1.40
3955 4227 6.653526 TTCTCCCCGAACACGAATATATAA 57.346 37.500 0.00 0.00 0.00 0.98
3956 4228 6.653526 TTTCTCCCCGAACACGAATATATA 57.346 37.500 0.00 0.00 0.00 0.86
3957 4229 5.540400 TTTCTCCCCGAACACGAATATAT 57.460 39.130 0.00 0.00 0.00 0.86
3958 4230 5.341872 TTTTCTCCCCGAACACGAATATA 57.658 39.130 0.00 0.00 0.00 0.86
3959 4231 3.899052 TTTCTCCCCGAACACGAATAT 57.101 42.857 0.00 0.00 0.00 1.28
3960 4232 3.681593 TTTTCTCCCCGAACACGAATA 57.318 42.857 0.00 0.00 0.00 1.75
3961 4233 2.554370 TTTTCTCCCCGAACACGAAT 57.446 45.000 0.00 0.00 0.00 3.34
3962 4234 2.328819 TTTTTCTCCCCGAACACGAA 57.671 45.000 0.00 0.00 0.00 3.85
3978 4250 7.065563 CGTGATGAATCCTTCTCTCTGATTTTT 59.934 37.037 0.00 0.00 0.00 1.94
3979 4251 6.538021 CGTGATGAATCCTTCTCTCTGATTTT 59.462 38.462 0.00 0.00 0.00 1.82
3980 4252 6.047870 CGTGATGAATCCTTCTCTCTGATTT 58.952 40.000 0.00 0.00 0.00 2.17
3981 4253 5.128499 ACGTGATGAATCCTTCTCTCTGATT 59.872 40.000 0.00 0.00 0.00 2.57
3982 4254 4.648762 ACGTGATGAATCCTTCTCTCTGAT 59.351 41.667 0.00 0.00 0.00 2.90
3983 4255 4.019858 ACGTGATGAATCCTTCTCTCTGA 58.980 43.478 0.00 0.00 0.00 3.27
3984 4256 4.383850 ACGTGATGAATCCTTCTCTCTG 57.616 45.455 0.00 0.00 0.00 3.35
3985 4257 5.413309 AAACGTGATGAATCCTTCTCTCT 57.587 39.130 0.00 0.00 0.00 3.10
3986 4258 6.237595 CGTAAAACGTGATGAATCCTTCTCTC 60.238 42.308 0.00 0.00 36.74 3.20
3987 4259 5.577164 CGTAAAACGTGATGAATCCTTCTCT 59.423 40.000 0.00 0.00 36.74 3.10
3988 4260 5.575606 TCGTAAAACGTGATGAATCCTTCTC 59.424 40.000 0.00 0.00 43.14 2.87
3989 4261 5.475719 TCGTAAAACGTGATGAATCCTTCT 58.524 37.500 0.00 0.00 43.14 2.85
3990 4262 5.773239 TCGTAAAACGTGATGAATCCTTC 57.227 39.130 0.00 0.00 43.14 3.46
3991 4263 6.020121 CGTATCGTAAAACGTGATGAATCCTT 60.020 38.462 0.00 0.00 43.14 3.36
3992 4264 5.457799 CGTATCGTAAAACGTGATGAATCCT 59.542 40.000 0.00 0.00 43.14 3.24
3993 4265 5.332055 CCGTATCGTAAAACGTGATGAATCC 60.332 44.000 0.00 0.00 43.14 3.01
3994 4266 5.456497 TCCGTATCGTAAAACGTGATGAATC 59.544 40.000 0.00 0.00 43.14 2.52
3995 4267 5.342433 TCCGTATCGTAAAACGTGATGAAT 58.658 37.500 0.00 0.00 43.14 2.57
3996 4268 4.731720 TCCGTATCGTAAAACGTGATGAA 58.268 39.130 0.00 0.00 43.14 2.57
3997 4269 4.345288 CTCCGTATCGTAAAACGTGATGA 58.655 43.478 0.00 0.00 43.14 2.92
3998 4270 3.061403 GCTCCGTATCGTAAAACGTGATG 60.061 47.826 0.00 0.00 43.14 3.07
3999 4271 3.111098 GCTCCGTATCGTAAAACGTGAT 58.889 45.455 0.00 0.00 43.14 3.06
4000 4272 2.518949 GCTCCGTATCGTAAAACGTGA 58.481 47.619 0.00 0.00 43.14 4.35
4001 4273 1.585214 GGCTCCGTATCGTAAAACGTG 59.415 52.381 0.00 0.00 43.14 4.49
4002 4274 1.795162 CGGCTCCGTATCGTAAAACGT 60.795 52.381 0.00 0.00 37.50 3.99
4003 4275 0.841984 CGGCTCCGTATCGTAAAACG 59.158 55.000 0.00 0.00 37.54 3.60
4004 4276 0.573987 GCGGCTCCGTATCGTAAAAC 59.426 55.000 10.24 0.00 42.09 2.43
4005 4277 0.528249 GGCGGCTCCGTATCGTAAAA 60.528 55.000 10.24 0.00 42.09 1.52
4006 4278 1.066257 GGCGGCTCCGTATCGTAAA 59.934 57.895 10.24 0.00 42.09 2.01
4007 4279 2.723746 GGCGGCTCCGTATCGTAA 59.276 61.111 10.24 0.00 42.09 3.18
4021 4293 3.810896 GTTTAGGGCTTGGCGGCG 61.811 66.667 0.51 0.51 39.52 6.46
4022 4294 2.361230 AGTTTAGGGCTTGGCGGC 60.361 61.111 0.00 0.00 37.49 6.53
4023 4295 0.744771 GAGAGTTTAGGGCTTGGCGG 60.745 60.000 0.00 0.00 0.00 6.13
4024 4296 0.250513 AGAGAGTTTAGGGCTTGGCG 59.749 55.000 0.00 0.00 0.00 5.69
4025 4297 1.740718 CGAGAGAGTTTAGGGCTTGGC 60.741 57.143 0.00 0.00 0.00 4.52
4026 4298 1.134670 CCGAGAGAGTTTAGGGCTTGG 60.135 57.143 0.00 0.00 0.00 3.61
4027 4299 1.134670 CCCGAGAGAGTTTAGGGCTTG 60.135 57.143 0.00 0.00 35.09 4.01
4028 4300 1.196012 CCCGAGAGAGTTTAGGGCTT 58.804 55.000 0.00 0.00 35.09 4.35
4029 4301 0.335361 TCCCGAGAGAGTTTAGGGCT 59.665 55.000 0.00 0.00 41.76 5.19
4030 4302 0.747852 CTCCCGAGAGAGTTTAGGGC 59.252 60.000 0.00 0.00 43.39 5.19
4031 4303 1.404843 CCTCCCGAGAGAGTTTAGGG 58.595 60.000 0.00 0.00 43.39 3.53
4032 4304 1.404843 CCCTCCCGAGAGAGTTTAGG 58.595 60.000 0.00 0.00 43.39 2.69
4033 4305 0.747852 GCCCTCCCGAGAGAGTTTAG 59.252 60.000 0.00 0.00 43.39 1.85
4034 4306 0.335361 AGCCCTCCCGAGAGAGTTTA 59.665 55.000 0.00 0.00 43.39 2.01
4035 4307 1.079438 AGCCCTCCCGAGAGAGTTT 59.921 57.895 0.00 0.00 43.39 2.66
4036 4308 1.684049 CAGCCCTCCCGAGAGAGTT 60.684 63.158 0.00 0.00 43.39 3.01
4037 4309 1.943730 ATCAGCCCTCCCGAGAGAGT 61.944 60.000 0.00 0.00 43.39 3.24
4038 4310 1.152567 ATCAGCCCTCCCGAGAGAG 60.153 63.158 0.00 0.00 43.39 3.20
4039 4311 1.152652 GATCAGCCCTCCCGAGAGA 60.153 63.158 0.00 0.00 43.39 3.10
4040 4312 0.111446 TAGATCAGCCCTCCCGAGAG 59.889 60.000 0.00 0.00 40.09 3.20
4041 4313 0.111446 CTAGATCAGCCCTCCCGAGA 59.889 60.000 0.00 0.00 0.00 4.04
4042 4314 0.111446 TCTAGATCAGCCCTCCCGAG 59.889 60.000 0.00 0.00 0.00 4.63
4043 4315 0.111446 CTCTAGATCAGCCCTCCCGA 59.889 60.000 0.00 0.00 0.00 5.14
4044 4316 0.178975 ACTCTAGATCAGCCCTCCCG 60.179 60.000 0.00 0.00 0.00 5.14
4045 4317 1.627864 GACTCTAGATCAGCCCTCCC 58.372 60.000 0.00 0.00 0.00 4.30
4046 4318 1.627864 GGACTCTAGATCAGCCCTCC 58.372 60.000 0.00 0.00 0.00 4.30
4047 4319 1.243902 CGGACTCTAGATCAGCCCTC 58.756 60.000 0.00 0.00 0.00 4.30
4048 4320 0.553819 ACGGACTCTAGATCAGCCCT 59.446 55.000 0.00 0.00 0.00 5.19
4049 4321 1.338655 GAACGGACTCTAGATCAGCCC 59.661 57.143 0.00 0.00 0.00 5.19
4050 4322 1.002251 CGAACGGACTCTAGATCAGCC 60.002 57.143 0.00 0.00 0.00 4.85
4051 4323 1.002251 CCGAACGGACTCTAGATCAGC 60.002 57.143 7.53 0.00 37.50 4.26
4052 4324 1.604755 CCCGAACGGACTCTAGATCAG 59.395 57.143 15.07 0.00 37.50 2.90
4053 4325 1.676746 CCCGAACGGACTCTAGATCA 58.323 55.000 15.07 0.00 37.50 2.92
4054 4326 0.953003 CCCCGAACGGACTCTAGATC 59.047 60.000 15.07 0.00 37.50 2.75
4055 4327 1.108132 GCCCCGAACGGACTCTAGAT 61.108 60.000 15.07 0.00 37.50 1.98
4056 4328 1.751927 GCCCCGAACGGACTCTAGA 60.752 63.158 15.07 0.00 37.50 2.43
4057 4329 1.726533 GAGCCCCGAACGGACTCTAG 61.727 65.000 15.07 0.00 36.21 2.43
4058 4330 1.751927 GAGCCCCGAACGGACTCTA 60.752 63.158 15.07 0.00 36.21 2.43
4059 4331 3.069318 GAGCCCCGAACGGACTCT 61.069 66.667 15.07 7.99 36.21 3.24
4060 4332 3.069318 AGAGCCCCGAACGGACTC 61.069 66.667 20.32 20.32 38.05 3.36
4061 4333 3.382832 CAGAGCCCCGAACGGACT 61.383 66.667 15.07 11.15 37.50 3.85
4062 4334 4.452733 CCAGAGCCCCGAACGGAC 62.453 72.222 15.07 6.48 37.50 4.79
4063 4335 4.689549 TCCAGAGCCCCGAACGGA 62.690 66.667 15.07 0.00 37.50 4.69
4064 4336 4.148825 CTCCAGAGCCCCGAACGG 62.149 72.222 6.25 6.25 0.00 4.44
4065 4337 3.068691 TCTCCAGAGCCCCGAACG 61.069 66.667 0.00 0.00 0.00 3.95
4066 4338 2.726351 CCTCTCCAGAGCCCCGAAC 61.726 68.421 0.00 0.00 40.75 3.95
4067 4339 2.364317 CCTCTCCAGAGCCCCGAA 60.364 66.667 0.00 0.00 40.75 4.30
4068 4340 4.465446 CCCTCTCCAGAGCCCCGA 62.465 72.222 0.00 0.00 40.75 5.14
4070 4342 2.923852 ATTCCCCTCTCCAGAGCCCC 62.924 65.000 0.00 0.00 40.75 5.80
4071 4343 1.385206 ATTCCCCTCTCCAGAGCCC 60.385 63.158 0.00 0.00 40.75 5.19
4072 4344 1.414866 GGATTCCCCTCTCCAGAGCC 61.415 65.000 0.00 0.00 40.75 4.70
4073 4345 1.753368 CGGATTCCCCTCTCCAGAGC 61.753 65.000 0.00 0.00 40.75 4.09
4074 4346 0.397816 ACGGATTCCCCTCTCCAGAG 60.398 60.000 0.00 0.00 41.71 3.35
4075 4347 0.397254 GACGGATTCCCCTCTCCAGA 60.397 60.000 0.00 0.00 0.00 3.86
4076 4348 1.739338 CGACGGATTCCCCTCTCCAG 61.739 65.000 0.00 0.00 0.00 3.86
4077 4349 1.756950 CGACGGATTCCCCTCTCCA 60.757 63.158 0.00 0.00 0.00 3.86
4078 4350 3.130227 CGACGGATTCCCCTCTCC 58.870 66.667 0.00 0.00 0.00 3.71
4079 4351 2.417936 GCGACGGATTCCCCTCTC 59.582 66.667 0.00 0.00 0.00 3.20
4080 4352 3.155167 GGCGACGGATTCCCCTCT 61.155 66.667 0.00 0.00 0.00 3.69
4081 4353 2.717139 GATGGCGACGGATTCCCCTC 62.717 65.000 0.00 0.00 0.00 4.30
4082 4354 2.768344 ATGGCGACGGATTCCCCT 60.768 61.111 0.00 0.00 0.00 4.79
4083 4355 2.280865 GATGGCGACGGATTCCCC 60.281 66.667 0.00 0.00 0.00 4.81
4084 4356 2.661866 CGATGGCGACGGATTCCC 60.662 66.667 0.00 0.00 40.82 3.97
4085 4357 1.949631 GACGATGGCGACGGATTCC 60.950 63.158 0.00 0.00 41.64 3.01
4086 4358 1.226859 TGACGATGGCGACGGATTC 60.227 57.895 0.00 0.00 41.64 2.52
4087 4359 2.889617 TGACGATGGCGACGGATT 59.110 55.556 0.00 0.00 41.64 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.