Multiple sequence alignment - TraesCS2D01G565200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G565200 chr2D 100.000 6470 0 0 1 6470 635232451 635225982 0.000000e+00 11948.0
1 TraesCS2D01G565200 chr2B 93.981 3871 168 27 550 4375 779344509 779340659 0.000000e+00 5797.0
2 TraesCS2D01G565200 chr2B 84.735 1795 122 81 4397 6115 779340565 779338847 0.000000e+00 1657.0
3 TraesCS2D01G565200 chr2B 87.867 511 44 11 59 554 779345044 779344537 9.350000e-163 584.0
4 TraesCS2D01G565200 chr2B 95.833 96 4 0 6027 6122 779320165 779320070 8.690000e-34 156.0
5 TraesCS2D01G565200 chr2B 100.000 37 0 0 5964 6000 779338261 779338225 1.160000e-07 69.4
6 TraesCS2D01G565200 chr2A 91.264 4350 234 67 1729 6005 777517813 777522089 0.000000e+00 5794.0
7 TraesCS2D01G565200 chr2A 90.528 1478 97 19 550 2004 777516457 777517914 0.000000e+00 1914.0
8 TraesCS2D01G565200 chr2A 88.577 534 46 8 30 554 777515898 777516425 9.150000e-178 634.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G565200 chr2D 635225982 635232451 6469 True 11948.000000 11948 100.00000 1 6470 1 chr2D.!!$R1 6469
1 TraesCS2D01G565200 chr2B 779338225 779345044 6819 True 2026.850000 5797 91.64575 59 6115 4 chr2B.!!$R2 6056
2 TraesCS2D01G565200 chr2A 777515898 777522089 6191 False 2780.666667 5794 90.12300 30 6005 3 chr2A.!!$F1 5975

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
818 875 0.251474 AATTTGCAGAGGCTCAGGCA 60.251 50.0 24.21 24.21 41.91 4.75 F
1065 1128 0.810031 CATCGGCACTCCCCTTTACG 60.810 60.0 0.00 0.00 0.00 3.18 F
2720 2985 0.244721 GAACAGTCCCTTGGCATTGC 59.755 55.0 0.00 0.00 0.00 3.56 F
4361 4641 0.109342 CCCTTTGACTGCTGTGTCCT 59.891 55.0 0.00 0.00 36.21 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2720 2985 0.036010 AGTGGTGGCCGATTCTTCTG 60.036 55.000 0.0 0.0 0.0 3.02 R
2731 2996 0.819259 TCAGTTGCTTCAGTGGTGGC 60.819 55.000 0.0 0.0 0.0 5.01 R
4658 5027 1.227263 CCAGTCGTCTAATGGGGCG 60.227 63.158 0.0 0.0 0.0 6.13 R
6064 6558 0.033504 TTCTTGTGCAGTCCGTCCTC 59.966 55.000 0.0 0.0 0.0 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.972198 TAGCACACAGAGAACGGGG 59.028 57.895 0.00 0.00 0.00 5.73
19 20 1.541310 TAGCACACAGAGAACGGGGG 61.541 60.000 0.00 0.00 0.00 5.40
20 21 2.879233 GCACACAGAGAACGGGGGA 61.879 63.158 0.00 0.00 0.00 4.81
21 22 1.293498 CACACAGAGAACGGGGGAG 59.707 63.158 0.00 0.00 0.00 4.30
22 23 1.152312 ACACAGAGAACGGGGGAGT 60.152 57.895 0.00 0.00 0.00 3.85
23 24 0.763223 ACACAGAGAACGGGGGAGTT 60.763 55.000 0.00 0.00 36.99 3.01
29 30 4.641792 AACGGGGGAGTTCACTCT 57.358 55.556 6.91 0.00 42.48 3.24
30 31 2.850016 AACGGGGGAGTTCACTCTT 58.150 52.632 6.91 0.00 42.48 2.85
31 32 0.685660 AACGGGGGAGTTCACTCTTC 59.314 55.000 6.91 0.60 42.48 2.87
32 33 1.192803 ACGGGGGAGTTCACTCTTCC 61.193 60.000 6.91 8.62 42.48 3.46
33 34 1.192146 CGGGGGAGTTCACTCTTCCA 61.192 60.000 16.29 0.00 42.48 3.53
34 35 0.325272 GGGGGAGTTCACTCTTCCAC 59.675 60.000 16.29 5.77 42.48 4.02
35 36 1.353091 GGGGAGTTCACTCTTCCACT 58.647 55.000 6.91 0.00 42.48 4.00
36 37 2.537143 GGGGAGTTCACTCTTCCACTA 58.463 52.381 6.91 0.00 42.48 2.74
37 38 3.108376 GGGGAGTTCACTCTTCCACTAT 58.892 50.000 6.91 0.00 42.48 2.12
38 39 3.133183 GGGGAGTTCACTCTTCCACTATC 59.867 52.174 6.91 0.00 42.48 2.08
39 40 4.027437 GGGAGTTCACTCTTCCACTATCT 58.973 47.826 6.91 0.00 42.48 1.98
82 83 9.751542 AACAGAGACAGTACATAGCATATTTAC 57.248 33.333 0.00 0.00 0.00 2.01
83 84 8.914011 ACAGAGACAGTACATAGCATATTTACA 58.086 33.333 0.00 0.00 0.00 2.41
84 85 9.920133 CAGAGACAGTACATAGCATATTTACAT 57.080 33.333 0.00 0.00 0.00 2.29
103 107 5.655893 ACATTTTCGAAAAGCAATGTTGG 57.344 34.783 25.87 10.53 36.64 3.77
115 119 6.790285 AAGCAATGTTGGTTTCAAATGATC 57.210 33.333 4.48 0.00 45.64 2.92
120 124 5.720371 TGTTGGTTTCAAATGATCGGATT 57.280 34.783 0.00 0.00 34.28 3.01
121 125 5.468592 TGTTGGTTTCAAATGATCGGATTG 58.531 37.500 0.00 0.00 34.28 2.67
129 133 8.861033 TTTCAAATGATCGGATTGAAATCATC 57.139 30.769 20.27 1.91 43.99 2.92
143 147 6.492007 TGAAATCATCAAACTCAAGAGCTC 57.508 37.500 5.27 5.27 34.30 4.09
148 152 2.964740 TCAAACTCAAGAGCTCCATCG 58.035 47.619 10.93 0.00 0.00 3.84
156 160 2.191128 AGAGCTCCATCGCTTGTTTT 57.809 45.000 10.93 0.00 41.08 2.43
198 202 0.389426 GGTACCACGCTGACATCGTT 60.389 55.000 7.15 0.00 38.19 3.85
237 241 1.200252 CAGTTCCATCTCGACGACACT 59.800 52.381 0.00 0.00 0.00 3.55
267 271 4.025401 CACAAGCACCGGGTTCGC 62.025 66.667 6.32 2.35 30.99 4.70
331 339 6.144078 ACAGTCCTACAATTCAAACCAAAC 57.856 37.500 0.00 0.00 0.00 2.93
410 418 2.584391 GGGCAAGGTCCTGTCGACT 61.584 63.158 17.92 0.00 41.64 4.18
503 511 4.630505 GCCAAGTAAAACTGTAGAGCTACC 59.369 45.833 5.29 0.00 35.26 3.18
537 552 2.846693 CGTATATGATCGTGTGCGCTA 58.153 47.619 9.73 0.00 38.14 4.26
576 626 0.256464 TGGATCCAGTGCATGCATCA 59.744 50.000 25.64 8.47 0.00 3.07
785 842 6.126863 TGGATTATCCAGACACTCTGTTTT 57.873 37.500 10.29 0.00 42.67 2.43
786 843 6.542821 TGGATTATCCAGACACTCTGTTTTT 58.457 36.000 10.29 0.00 42.67 1.94
787 844 6.430925 TGGATTATCCAGACACTCTGTTTTTG 59.569 38.462 10.29 0.00 42.67 2.44
794 851 5.220662 CCAGACACTCTGTTTTTGTACTGTG 60.221 44.000 0.00 0.00 42.80 3.66
796 853 6.533723 CAGACACTCTGTTTTTGTACTGTGTA 59.466 38.462 0.00 0.00 39.58 2.90
818 875 0.251474 AATTTGCAGAGGCTCAGGCA 60.251 50.000 24.21 24.21 41.91 4.75
844 901 2.037649 CAATGTTTGCGCGTAAACGAA 58.962 42.857 35.74 25.34 42.11 3.85
881 939 1.822990 CTCCTGTACGTTAAGCCCTCA 59.177 52.381 0.00 0.00 0.00 3.86
899 957 1.283613 TCAATGAAGCGGTATGGGGTT 59.716 47.619 0.00 0.00 0.00 4.11
1034 1097 1.728672 CCGCCGTCTCTAACCTCTC 59.271 63.158 0.00 0.00 0.00 3.20
1044 1107 1.076192 TAACCTCTCCCTCCGCCTC 60.076 63.158 0.00 0.00 0.00 4.70
1047 1110 4.465446 CTCTCCCTCCGCCTCCCA 62.465 72.222 0.00 0.00 0.00 4.37
1061 1124 3.411517 CCCATCGGCACTCCCCTT 61.412 66.667 0.00 0.00 0.00 3.95
1065 1128 0.810031 CATCGGCACTCCCCTTTACG 60.810 60.000 0.00 0.00 0.00 3.18
1109 1172 2.434884 CATTCCACACGCTCCGCT 60.435 61.111 0.00 0.00 0.00 5.52
1147 1213 2.105128 CCTCGCGAACCCTAGCAG 59.895 66.667 11.33 0.00 0.00 4.24
1383 1449 3.564027 CTGGATTTCGGCGGCGTC 61.564 66.667 31.06 20.67 0.00 5.19
1459 1525 3.916392 GAGATATGCGGCGTCGGGG 62.916 68.421 13.05 0.00 36.79 5.73
1534 1602 2.641815 GAGATGCCAGATGGGAGGTAAT 59.358 50.000 0.12 0.00 39.50 1.89
1539 1607 2.352371 CCAGATGGGAGGTAATGGGAT 58.648 52.381 0.00 0.00 40.01 3.85
1567 1637 5.186996 CAGCTTAACTGTTGTGGAAATGT 57.813 39.130 2.69 0.00 41.86 2.71
1578 1648 5.580691 TGTTGTGGAAATGTAATCGAGCTAG 59.419 40.000 0.00 0.00 0.00 3.42
1595 1671 5.812642 CGAGCTAGAATGTAGTGATTTGGTT 59.187 40.000 0.00 0.00 0.00 3.67
1662 1738 2.096248 TCAGACACAAAACCCACCAAC 58.904 47.619 0.00 0.00 0.00 3.77
1711 1795 4.630894 TGGAACACTGAAACACAACATC 57.369 40.909 0.00 0.00 0.00 3.06
1718 1807 4.905866 CACTGAAACACAACATCGATGAAC 59.094 41.667 31.33 12.44 0.00 3.18
1836 1926 6.685828 CAGTTAGCAAATCATCTTGATGAACG 59.314 38.462 15.98 9.29 37.15 3.95
1856 1946 7.335627 TGAACGATTTTCTGTATGTAGGGAAT 58.664 34.615 0.00 0.00 0.00 3.01
1930 2194 5.083533 TCAGAAGGTTTGTTTGTGCAATT 57.916 34.783 0.00 0.00 0.00 2.32
1978 2242 2.983592 CAGTGCCCCGTTTGGACC 60.984 66.667 0.00 0.00 37.49 4.46
2013 2277 2.550830 ACTCAGCTTGGGTTGTACAG 57.449 50.000 0.00 0.00 0.00 2.74
2014 2278 1.768870 ACTCAGCTTGGGTTGTACAGT 59.231 47.619 0.00 0.00 0.00 3.55
2028 2292 7.336427 TGGGTTGTACAGTATTATTTTTACCGG 59.664 37.037 0.00 0.00 0.00 5.28
2042 2306 2.973694 TACCGGTGGCATCTTAAGAC 57.026 50.000 19.93 0.00 0.00 3.01
2089 2354 6.951198 CAGGTACACCTCTCTTCTGGATATAT 59.049 42.308 0.00 0.00 46.65 0.86
2157 2422 1.556911 TGCCTTGACTCCAATCTCTCC 59.443 52.381 0.00 0.00 0.00 3.71
2163 2428 3.184628 TGACTCCAATCTCTCCATGGTT 58.815 45.455 12.58 0.00 35.66 3.67
2219 2484 2.100418 GCAAGGAAAGGAGGATGAATGC 59.900 50.000 0.00 0.00 0.00 3.56
2319 2584 2.875786 GCGCCGCTCTAGAATGTGC 61.876 63.158 0.00 0.00 0.00 4.57
2490 2755 1.474077 GAGTTGGCAGTATTGGGCTTG 59.526 52.381 0.00 0.00 0.00 4.01
2517 2782 4.162320 ACTTCAAGAATAGCAGATTCCCGA 59.838 41.667 7.53 3.12 0.00 5.14
2548 2813 4.405358 TCAGGCATTTGATGGGGAAAATAC 59.595 41.667 0.00 0.00 0.00 1.89
2630 2895 2.237143 CTGCCTTCAGTGACAGGGATAA 59.763 50.000 17.67 2.07 35.61 1.75
2700 2965 3.797039 CATTCGACATCCTTTGCTCCTA 58.203 45.455 0.00 0.00 0.00 2.94
2715 2980 1.208293 CTCCTAGAACAGTCCCTTGGC 59.792 57.143 0.00 0.00 0.00 4.52
2717 2982 1.561542 CCTAGAACAGTCCCTTGGCAT 59.438 52.381 0.00 0.00 0.00 4.40
2720 2985 0.244721 GAACAGTCCCTTGGCATTGC 59.755 55.000 0.00 0.00 0.00 3.56
2729 2994 2.159142 CCCTTGGCATTGCAGAAGAATC 60.159 50.000 17.01 0.00 0.00 2.52
2731 2996 1.097232 TGGCATTGCAGAAGAATCGG 58.903 50.000 11.39 0.00 0.00 4.18
2732 2997 0.248784 GGCATTGCAGAAGAATCGGC 60.249 55.000 11.39 0.00 45.61 5.54
2733 2998 0.248784 GCATTGCAGAAGAATCGGCC 60.249 55.000 3.15 0.00 44.91 6.13
2758 3023 0.823356 TGAAGCAACTGAAGTGGGGC 60.823 55.000 0.00 0.00 0.00 5.80
2761 3026 1.109323 AGCAACTGAAGTGGGGCAAC 61.109 55.000 0.00 0.00 0.00 4.17
3370 3635 6.385649 TTGGAAACTCTGAAACCAACATAC 57.614 37.500 0.00 0.00 36.00 2.39
3400 3665 2.549082 TGGGGAAGTACCGGTAATTCA 58.451 47.619 39.95 26.24 40.65 2.57
3448 3713 7.231317 TCAATTGGCTTTGATCAGAAAGTACTT 59.769 33.333 1.12 1.12 35.67 2.24
3850 4117 9.503427 AACTTTGAAGTTCAACTTAAGAATTCG 57.497 29.630 17.85 0.00 45.65 3.34
3919 4186 1.654954 CCTCATTGGCTGCTGCTCAC 61.655 60.000 15.64 0.00 39.59 3.51
3948 4215 1.891060 GAGTTTGCTGTCAGCGACGG 61.891 60.000 19.68 11.61 46.26 4.79
3982 4249 8.000780 AGAGTTTATATGTTCCTCAAATTGGC 57.999 34.615 0.00 0.00 0.00 4.52
4196 4463 7.601073 TTTGCATCCGCTCTATAATAGATTG 57.399 36.000 0.00 0.00 39.64 2.67
4206 4473 6.574073 GCTCTATAATAGATTGTCCAGCTGCT 60.574 42.308 8.66 0.00 33.66 4.24
4264 4539 8.702438 CAACATGATAAACCTGTTTGAAATGTC 58.298 33.333 0.00 0.00 35.72 3.06
4361 4641 0.109342 CCCTTTGACTGCTGTGTCCT 59.891 55.000 0.00 0.00 36.21 3.85
4374 4733 6.149474 ACTGCTGTGTCCTTGATAAAATGTAC 59.851 38.462 0.00 0.00 0.00 2.90
4377 4736 6.348213 GCTGTGTCCTTGATAAAATGTACGTT 60.348 38.462 0.00 0.00 0.00 3.99
4415 4774 3.173151 TGAGGTTCTCACTGGCATCTAA 58.827 45.455 0.00 0.00 35.39 2.10
4486 4845 4.556233 CAGGTCTCGTTAACACTCATCAA 58.444 43.478 6.39 0.00 0.00 2.57
4658 5027 1.930908 ATCGAGTTGGGTCGTCGGAC 61.931 60.000 0.00 0.00 40.93 4.79
4970 5348 0.107654 GCAAAGCTAGACCGGTGGAT 60.108 55.000 14.63 0.00 0.00 3.41
4998 5376 5.261209 TCCATGCATGCACCTTAATTAAC 57.739 39.130 25.37 0.00 0.00 2.01
5026 5404 5.069648 ACTCCCATCATATATCATGTAGGCG 59.930 44.000 0.00 0.00 0.00 5.52
5039 5417 0.249741 GTAGGCGGCGTATGATTGGT 60.250 55.000 9.37 0.00 0.00 3.67
5047 5425 3.211045 GGCGTATGATTGGTTGTATGGT 58.789 45.455 0.00 0.00 0.00 3.55
5052 5430 4.963276 ATGATTGGTTGTATGGTCAACG 57.037 40.909 0.00 0.00 45.75 4.10
5065 5443 7.778083 TGTATGGTCAACGTTGTCTATTATCT 58.222 34.615 26.47 7.54 0.00 1.98
5066 5444 8.905850 TGTATGGTCAACGTTGTCTATTATCTA 58.094 33.333 26.47 7.55 0.00 1.98
5067 5445 9.909644 GTATGGTCAACGTTGTCTATTATCTAT 57.090 33.333 26.47 13.00 0.00 1.98
5069 5447 8.002984 TGGTCAACGTTGTCTATTATCTATCA 57.997 34.615 26.47 8.05 0.00 2.15
5070 5448 7.919091 TGGTCAACGTTGTCTATTATCTATCAC 59.081 37.037 26.47 12.36 0.00 3.06
5071 5449 7.381678 GGTCAACGTTGTCTATTATCTATCACC 59.618 40.741 26.47 17.07 0.00 4.02
5072 5450 7.919091 GTCAACGTTGTCTATTATCTATCACCA 59.081 37.037 26.47 0.00 0.00 4.17
5073 5451 8.471609 TCAACGTTGTCTATTATCTATCACCAA 58.528 33.333 26.47 0.00 0.00 3.67
5074 5452 8.755941 CAACGTTGTCTATTATCTATCACCAAG 58.244 37.037 20.21 0.00 0.00 3.61
5075 5453 6.924060 ACGTTGTCTATTATCTATCACCAAGC 59.076 38.462 0.00 0.00 0.00 4.01
5076 5454 6.366332 CGTTGTCTATTATCTATCACCAAGCC 59.634 42.308 0.00 0.00 0.00 4.35
5091 5469 3.160269 CCAAGCCTTGGTTCTTCAATCT 58.840 45.455 15.63 0.00 45.93 2.40
5099 5477 2.108075 TGGTTCTTCAATCTTGCCCTGA 59.892 45.455 0.00 0.00 0.00 3.86
5100 5478 3.245371 TGGTTCTTCAATCTTGCCCTGAT 60.245 43.478 0.00 0.00 0.00 2.90
5337 5784 1.079336 GCCGTACCAGGTCCTGTTC 60.079 63.158 17.85 6.63 0.00 3.18
5476 5923 3.735208 CGCCTACATCGAGTGAATGAAGT 60.735 47.826 0.00 0.00 0.00 3.01
5495 5942 1.433053 TTACAAATCGATGGCGGCGG 61.433 55.000 9.78 0.00 38.28 6.13
5512 5959 2.031616 GCACTGCTGACTGCTCCA 59.968 61.111 5.87 0.00 43.37 3.86
5513 5960 2.323580 GCACTGCTGACTGCTCCAC 61.324 63.158 5.87 0.00 43.37 4.02
5514 5961 1.370437 CACTGCTGACTGCTCCACT 59.630 57.895 5.87 0.00 43.37 4.00
5515 5962 0.669932 CACTGCTGACTGCTCCACTC 60.670 60.000 5.87 0.00 43.37 3.51
5516 5963 1.079266 CTGCTGACTGCTCCACTCC 60.079 63.158 5.87 0.00 43.37 3.85
5517 5964 2.125753 GCTGACTGCTCCACTCCG 60.126 66.667 0.00 0.00 38.95 4.63
5518 5965 2.936912 GCTGACTGCTCCACTCCGT 61.937 63.158 0.00 0.00 38.95 4.69
5519 5966 1.595993 GCTGACTGCTCCACTCCGTA 61.596 60.000 0.00 0.00 38.95 4.02
5520 5967 0.171455 CTGACTGCTCCACTCCGTAC 59.829 60.000 0.00 0.00 0.00 3.67
5521 5968 1.248785 TGACTGCTCCACTCCGTACC 61.249 60.000 0.00 0.00 0.00 3.34
5522 5969 0.966370 GACTGCTCCACTCCGTACCT 60.966 60.000 0.00 0.00 0.00 3.08
5550 6007 3.085443 GCGACAGCTATACATCACAGT 57.915 47.619 0.00 0.00 41.01 3.55
5558 6015 6.127225 ACAGCTATACATCACAGTTCACAGAT 60.127 38.462 0.00 0.00 0.00 2.90
5559 6016 6.200475 CAGCTATACATCACAGTTCACAGATG 59.800 42.308 0.00 0.00 42.61 2.90
5560 6017 6.097412 AGCTATACATCACAGTTCACAGATGA 59.903 38.462 8.11 0.00 40.10 2.92
5561 6018 6.199908 GCTATACATCACAGTTCACAGATGAC 59.800 42.308 8.11 0.00 40.10 3.06
5562 6019 4.341366 ACATCACAGTTCACAGATGACA 57.659 40.909 8.11 0.00 40.10 3.58
5563 6020 4.060900 ACATCACAGTTCACAGATGACAC 58.939 43.478 8.11 0.00 40.10 3.67
5564 6021 3.817709 TCACAGTTCACAGATGACACA 57.182 42.857 0.00 0.00 33.38 3.72
5565 6022 3.457234 TCACAGTTCACAGATGACACAC 58.543 45.455 0.00 0.00 33.38 3.82
5566 6023 3.118811 TCACAGTTCACAGATGACACACA 60.119 43.478 0.00 0.00 33.38 3.72
5567 6024 3.622612 CACAGTTCACAGATGACACACAA 59.377 43.478 0.00 0.00 33.38 3.33
5568 6025 3.873361 ACAGTTCACAGATGACACACAAG 59.127 43.478 0.00 0.00 33.38 3.16
5572 6029 2.874086 TCACAGATGACACACAAGCAAG 59.126 45.455 0.00 0.00 0.00 4.01
5588 6045 1.606737 GCAAGAGAGTTCTCCTGCGTT 60.607 52.381 14.86 0.00 46.49 4.84
5601 6058 4.750098 TCTCCTGCGTTTTGTAGAGAAAAG 59.250 41.667 0.00 0.00 30.84 2.27
5602 6059 4.448210 TCCTGCGTTTTGTAGAGAAAAGT 58.552 39.130 0.00 0.00 30.84 2.66
5604 6061 6.050432 TCCTGCGTTTTGTAGAGAAAAGTAA 58.950 36.000 0.00 0.00 30.84 2.24
5605 6062 6.539464 TCCTGCGTTTTGTAGAGAAAAGTAAA 59.461 34.615 0.00 0.00 30.84 2.01
5629 6104 3.245284 CACACAACAGAGTTGGAACTACG 59.755 47.826 13.71 0.00 39.88 3.51
5666 6148 5.063880 AGGAAATTACGCAACAGAGTTTCT 58.936 37.500 0.00 0.00 0.00 2.52
5668 6150 5.049680 GGAAATTACGCAACAGAGTTTCTCA 60.050 40.000 0.00 0.00 32.06 3.27
5669 6151 6.371809 AAATTACGCAACAGAGTTTCTCAA 57.628 33.333 0.00 0.00 32.06 3.02
5670 6152 6.560253 AATTACGCAACAGAGTTTCTCAAT 57.440 33.333 0.00 0.00 32.06 2.57
5671 6153 3.885484 ACGCAACAGAGTTTCTCAATG 57.115 42.857 0.00 0.00 32.06 2.82
5673 6155 2.578495 GCAACAGAGTTTCTCAATGCG 58.422 47.619 0.00 0.00 32.06 4.73
5674 6156 2.224079 GCAACAGAGTTTCTCAATGCGA 59.776 45.455 0.00 0.00 32.06 5.10
5675 6157 3.303990 GCAACAGAGTTTCTCAATGCGAA 60.304 43.478 0.00 0.00 32.06 4.70
5676 6158 4.789481 GCAACAGAGTTTCTCAATGCGAAA 60.789 41.667 0.00 0.00 32.06 3.46
5682 6164 4.936396 GTTTCTCAATGCGAAACTGTTG 57.064 40.909 18.32 0.00 44.12 3.33
5683 6165 4.351192 GTTTCTCAATGCGAAACTGTTGT 58.649 39.130 18.32 0.00 44.12 3.32
5690 6184 5.912396 TCAATGCGAAACTGTTGTTTACATC 59.088 36.000 0.00 0.00 45.36 3.06
5709 6203 3.667497 TCAGAAGATATCCATCCACGC 57.333 47.619 0.00 0.00 0.00 5.34
5732 6226 2.440247 GGGTGGAATTGAGCCGGG 60.440 66.667 2.18 0.00 0.00 5.73
5748 6242 2.273449 GGCCTGGTGACATGGGAG 59.727 66.667 0.00 0.00 41.51 4.30
5755 6249 0.543749 GGTGACATGGGAGGAAGAGG 59.456 60.000 0.00 0.00 0.00 3.69
5756 6250 0.543749 GTGACATGGGAGGAAGAGGG 59.456 60.000 0.00 0.00 0.00 4.30
5757 6251 0.119155 TGACATGGGAGGAAGAGGGT 59.881 55.000 0.00 0.00 0.00 4.34
5819 6313 3.573967 GGGATTAATGTAATGGGCACTGG 59.426 47.826 0.00 0.00 0.00 4.00
5916 6410 0.322098 TTGGTGGGTAGGTTCATGCG 60.322 55.000 0.00 0.00 0.00 4.73
5943 6437 4.198625 GCATCAGTGCGCTTCTCT 57.801 55.556 9.73 0.00 42.28 3.10
5944 6438 1.714414 GCATCAGTGCGCTTCTCTG 59.286 57.895 9.73 12.02 42.28 3.35
5945 6439 1.703438 GCATCAGTGCGCTTCTCTGG 61.703 60.000 9.73 2.32 42.28 3.86
5946 6440 0.108472 CATCAGTGCGCTTCTCTGGA 60.108 55.000 9.73 1.79 37.03 3.86
6014 6508 4.157289 TCTTTCATCGGTTTCGCTACTACT 59.843 41.667 0.00 0.00 36.13 2.57
6015 6509 3.687572 TCATCGGTTTCGCTACTACTC 57.312 47.619 0.00 0.00 36.13 2.59
6016 6510 3.011818 TCATCGGTTTCGCTACTACTCA 58.988 45.455 0.00 0.00 36.13 3.41
6018 6512 1.470098 TCGGTTTCGCTACTACTCACC 59.530 52.381 0.00 0.00 36.13 4.02
6019 6513 1.200716 CGGTTTCGCTACTACTCACCA 59.799 52.381 0.00 0.00 0.00 4.17
6020 6514 2.731341 CGGTTTCGCTACTACTCACCAG 60.731 54.545 0.00 0.00 0.00 4.00
6021 6515 2.230750 GGTTTCGCTACTACTCACCAGT 59.769 50.000 0.00 0.00 36.55 4.00
6022 6516 3.243336 GTTTCGCTACTACTCACCAGTG 58.757 50.000 0.00 0.00 33.62 3.66
6023 6517 0.809385 TCGCTACTACTCACCAGTGC 59.191 55.000 0.00 0.00 33.62 4.40
6024 6518 0.811915 CGCTACTACTCACCAGTGCT 59.188 55.000 0.00 0.00 33.62 4.40
6025 6519 1.468224 CGCTACTACTCACCAGTGCTG 60.468 57.143 0.00 0.00 33.62 4.41
6046 6540 1.949525 CCAGGGGCTATGTTTCATTCG 59.050 52.381 0.00 0.00 0.00 3.34
6051 6545 2.477863 GGGCTATGTTTCATTCGCACAC 60.478 50.000 0.00 0.00 0.00 3.82
6054 6548 3.120199 GCTATGTTTCATTCGCACACAGT 60.120 43.478 0.00 0.00 0.00 3.55
6055 6549 2.753989 TGTTTCATTCGCACACAGTG 57.246 45.000 0.00 0.00 36.51 3.66
6065 6559 2.603915 CACACAGTGCATCACGTGA 58.396 52.632 22.48 22.48 39.35 4.35
6066 6560 0.509929 CACACAGTGCATCACGTGAG 59.490 55.000 24.41 16.12 39.35 3.51
6069 6563 0.319900 ACAGTGCATCACGTGAGGAC 60.320 55.000 32.36 26.55 39.64 3.85
6078 6572 2.430921 CGTGAGGACGGACTGCAC 60.431 66.667 0.00 0.00 42.18 4.57
6081 6577 0.946221 GTGAGGACGGACTGCACAAG 60.946 60.000 0.00 0.00 0.00 3.16
6084 6580 0.249911 AGGACGGACTGCACAAGAAC 60.250 55.000 0.00 0.00 0.00 3.01
6087 6583 1.668751 GACGGACTGCACAAGAACAAA 59.331 47.619 0.00 0.00 0.00 2.83
6095 6591 4.576463 ACTGCACAAGAACAAAGAGGTAAG 59.424 41.667 0.00 0.00 0.00 2.34
6105 6601 2.853731 AAGAGGTAAGATCACTCGCG 57.146 50.000 0.00 0.00 36.40 5.87
6107 6603 0.739561 GAGGTAAGATCACTCGCGGT 59.260 55.000 6.13 0.00 0.00 5.68
6108 6604 0.739561 AGGTAAGATCACTCGCGGTC 59.260 55.000 6.13 0.00 0.00 4.79
6109 6605 0.454600 GGTAAGATCACTCGCGGTCA 59.545 55.000 6.13 0.00 0.00 4.02
6110 6606 1.135199 GGTAAGATCACTCGCGGTCAA 60.135 52.381 6.13 0.00 0.00 3.18
6122 6630 2.388232 CGGTCAACGCCTAACCAGC 61.388 63.158 0.00 0.00 34.82 4.85
6129 6637 4.096003 GCCTAACCAGCGCCTCCA 62.096 66.667 2.29 0.00 0.00 3.86
6130 6638 2.125106 CCTAACCAGCGCCTCCAC 60.125 66.667 2.29 0.00 0.00 4.02
6131 6639 2.509336 CTAACCAGCGCCTCCACG 60.509 66.667 2.29 0.00 0.00 4.94
6132 6640 4.077184 TAACCAGCGCCTCCACGG 62.077 66.667 2.29 0.00 0.00 4.94
6155 6698 5.528690 GGCTGTCTGCTGATGATAACATTAA 59.471 40.000 0.00 0.00 42.39 1.40
6156 6699 6.038603 GGCTGTCTGCTGATGATAACATTAAA 59.961 38.462 0.00 0.00 42.39 1.52
6157 6700 6.909357 GCTGTCTGCTGATGATAACATTAAAC 59.091 38.462 0.00 0.00 36.38 2.01
6158 6701 7.201679 GCTGTCTGCTGATGATAACATTAAACT 60.202 37.037 0.00 0.00 36.38 2.66
6159 6702 8.201554 TGTCTGCTGATGATAACATTAAACTC 57.798 34.615 0.00 0.00 36.82 3.01
6160 6703 7.280876 TGTCTGCTGATGATAACATTAAACTCC 59.719 37.037 0.00 0.00 36.82 3.85
6161 6704 6.479990 TCTGCTGATGATAACATTAAACTCCG 59.520 38.462 0.00 0.00 36.82 4.63
6162 6705 6.112734 TGCTGATGATAACATTAAACTCCGT 58.887 36.000 0.00 0.00 36.82 4.69
6163 6706 6.597672 TGCTGATGATAACATTAAACTCCGTT 59.402 34.615 0.00 0.00 36.82 4.44
6164 6707 7.120579 TGCTGATGATAACATTAAACTCCGTTT 59.879 33.333 0.00 0.00 36.93 3.60
6165 6708 7.640240 GCTGATGATAACATTAAACTCCGTTTC 59.360 37.037 0.00 0.00 35.69 2.78
6187 6739 9.498307 GTTTCTTTAAACCACAATATACATCCG 57.502 33.333 0.00 0.00 39.29 4.18
6191 6743 5.689383 AAACCACAATATACATCCGATGC 57.311 39.130 8.36 0.00 0.00 3.91
6196 6748 5.181009 CACAATATACATCCGATGCCAGAT 58.819 41.667 8.36 0.00 0.00 2.90
6203 6755 3.316308 ACATCCGATGCCAGATTTTTAGC 59.684 43.478 8.36 0.00 0.00 3.09
6204 6756 3.281727 TCCGATGCCAGATTTTTAGCT 57.718 42.857 0.00 0.00 0.00 3.32
6207 6759 4.107622 CCGATGCCAGATTTTTAGCTTTG 58.892 43.478 0.00 0.00 0.00 2.77
6208 6760 4.107622 CGATGCCAGATTTTTAGCTTTGG 58.892 43.478 0.00 0.00 0.00 3.28
6209 6761 3.959535 TGCCAGATTTTTAGCTTTGGG 57.040 42.857 0.00 0.00 0.00 4.12
6210 6762 2.566724 TGCCAGATTTTTAGCTTTGGGG 59.433 45.455 0.00 0.00 0.00 4.96
6211 6763 2.567169 GCCAGATTTTTAGCTTTGGGGT 59.433 45.455 0.00 0.00 0.00 4.95
6213 6765 4.568956 CCAGATTTTTAGCTTTGGGGTTG 58.431 43.478 0.00 0.00 0.00 3.77
6214 6766 4.563374 CCAGATTTTTAGCTTTGGGGTTGG 60.563 45.833 0.00 0.00 0.00 3.77
6215 6767 2.920724 TTTTTAGCTTTGGGGTTGGC 57.079 45.000 0.00 0.00 0.00 4.52
6216 6768 2.095604 TTTTAGCTTTGGGGTTGGCT 57.904 45.000 0.00 0.00 38.62 4.75
6217 6769 2.982339 TTTAGCTTTGGGGTTGGCTA 57.018 45.000 0.00 0.00 36.40 3.93
6219 6771 0.623723 TAGCTTTGGGGTTGGCTAGG 59.376 55.000 0.00 0.00 36.40 3.02
6230 6782 2.809010 GGCTAGGCCTCAGTCGAC 59.191 66.667 9.68 7.70 46.69 4.20
6231 6783 2.787567 GGCTAGGCCTCAGTCGACC 61.788 68.421 9.68 0.00 46.69 4.79
6232 6784 3.111939 CTAGGCCTCAGTCGACCG 58.888 66.667 9.68 1.05 0.00 4.79
6233 6785 1.451567 CTAGGCCTCAGTCGACCGA 60.452 63.158 9.68 6.63 0.00 4.69
6234 6786 1.440938 CTAGGCCTCAGTCGACCGAG 61.441 65.000 19.86 19.86 0.00 4.63
6237 6789 1.668101 GGCCTCAGTCGACCGAGATT 61.668 60.000 26.72 0.00 0.00 2.40
6238 6790 0.173708 GCCTCAGTCGACCGAGATTT 59.826 55.000 26.72 0.00 0.00 2.17
6239 6791 1.404391 GCCTCAGTCGACCGAGATTTA 59.596 52.381 26.72 0.00 0.00 1.40
6241 6793 3.491104 GCCTCAGTCGACCGAGATTTAAT 60.491 47.826 26.72 0.00 0.00 1.40
6242 6794 4.291783 CCTCAGTCGACCGAGATTTAATC 58.708 47.826 26.72 0.00 0.00 1.75
6243 6795 4.202020 CCTCAGTCGACCGAGATTTAATCA 60.202 45.833 26.72 0.00 0.00 2.57
6244 6796 4.669318 TCAGTCGACCGAGATTTAATCAC 58.331 43.478 13.01 0.00 0.00 3.06
6245 6797 4.157105 TCAGTCGACCGAGATTTAATCACA 59.843 41.667 13.01 0.00 0.00 3.58
6247 6799 4.398358 AGTCGACCGAGATTTAATCACAGA 59.602 41.667 13.01 0.00 0.00 3.41
6249 6801 6.262496 AGTCGACCGAGATTTAATCACAGATA 59.738 38.462 13.01 0.00 0.00 1.98
6250 6802 7.040340 AGTCGACCGAGATTTAATCACAGATAT 60.040 37.037 13.01 0.00 0.00 1.63
6251 6803 8.235226 GTCGACCGAGATTTAATCACAGATATA 58.765 37.037 3.51 0.00 0.00 0.86
6252 6804 8.235226 TCGACCGAGATTTAATCACAGATATAC 58.765 37.037 7.74 0.00 0.00 1.47
6253 6805 7.485277 CGACCGAGATTTAATCACAGATATACC 59.515 40.741 7.74 0.00 0.00 2.73
6254 6806 8.190326 ACCGAGATTTAATCACAGATATACCA 57.810 34.615 7.74 0.00 0.00 3.25
6257 6809 9.091784 CGAGATTTAATCACAGATATACCATGG 57.908 37.037 11.19 11.19 0.00 3.66
6266 6818 6.844388 TCACAGATATACCATGGGTTAAGACT 59.156 38.462 18.09 3.64 37.09 3.24
6267 6819 7.347222 TCACAGATATACCATGGGTTAAGACTT 59.653 37.037 18.09 0.00 37.09 3.01
6268 6820 7.442364 CACAGATATACCATGGGTTAAGACTTG 59.558 40.741 18.09 5.82 37.09 3.16
6270 6822 7.875041 CAGATATACCATGGGTTAAGACTTGAG 59.125 40.741 18.09 0.00 37.09 3.02
6271 6823 7.789831 AGATATACCATGGGTTAAGACTTGAGA 59.210 37.037 18.09 0.00 37.09 3.27
6272 6824 6.831664 ATACCATGGGTTAAGACTTGAGAT 57.168 37.500 18.09 0.00 37.09 2.75
6275 6827 4.080356 CCATGGGTTAAGACTTGAGATCCA 60.080 45.833 2.85 0.48 0.00 3.41
6276 6828 4.826274 TGGGTTAAGACTTGAGATCCAG 57.174 45.455 0.00 0.00 0.00 3.86
6277 6829 4.425772 TGGGTTAAGACTTGAGATCCAGA 58.574 43.478 0.00 0.00 0.00 3.86
6278 6830 5.032846 TGGGTTAAGACTTGAGATCCAGAT 58.967 41.667 0.00 0.00 0.00 2.90
6280 6832 6.012508 TGGGTTAAGACTTGAGATCCAGATTT 60.013 38.462 0.00 0.00 0.00 2.17
6281 6833 7.182026 TGGGTTAAGACTTGAGATCCAGATTTA 59.818 37.037 0.00 0.00 0.00 1.40
6282 6834 7.713073 GGGTTAAGACTTGAGATCCAGATTTAG 59.287 40.741 0.00 0.00 0.00 1.85
6283 6835 7.225734 GGTTAAGACTTGAGATCCAGATTTAGC 59.774 40.741 0.00 0.00 0.00 3.09
6286 6838 6.347696 AGACTTGAGATCCAGATTTAGCAAG 58.652 40.000 0.00 0.00 37.92 4.01
6287 6839 6.155910 AGACTTGAGATCCAGATTTAGCAAGA 59.844 38.462 0.00 0.00 36.08 3.02
6288 6840 6.112058 ACTTGAGATCCAGATTTAGCAAGAC 58.888 40.000 0.00 0.00 36.08 3.01
6290 6842 5.668471 TGAGATCCAGATTTAGCAAGACTG 58.332 41.667 0.00 0.00 0.00 3.51
6291 6843 5.188555 TGAGATCCAGATTTAGCAAGACTGT 59.811 40.000 0.00 0.00 0.00 3.55
6292 6844 5.669477 AGATCCAGATTTAGCAAGACTGTC 58.331 41.667 0.00 0.00 0.00 3.51
6293 6845 4.890158 TCCAGATTTAGCAAGACTGTCA 57.110 40.909 10.88 0.00 0.00 3.58
6294 6846 4.569943 TCCAGATTTAGCAAGACTGTCAC 58.430 43.478 10.88 0.00 0.00 3.67
6295 6847 3.369147 CCAGATTTAGCAAGACTGTCACG 59.631 47.826 10.88 1.33 0.00 4.35
6297 6849 4.090642 CAGATTTAGCAAGACTGTCACGTC 59.909 45.833 10.88 0.00 0.00 4.34
6298 6850 2.046283 TTAGCAAGACTGTCACGTCG 57.954 50.000 10.88 0.00 38.90 5.12
6299 6851 0.949397 TAGCAAGACTGTCACGTCGT 59.051 50.000 10.88 0.00 38.90 4.34
6301 6853 1.540267 AGCAAGACTGTCACGTCGTAT 59.460 47.619 10.88 0.00 38.90 3.06
6302 6854 1.912110 GCAAGACTGTCACGTCGTATC 59.088 52.381 10.88 0.00 38.90 2.24
6303 6855 2.516923 CAAGACTGTCACGTCGTATCC 58.483 52.381 10.88 0.00 38.90 2.59
6304 6856 2.110901 AGACTGTCACGTCGTATCCT 57.889 50.000 10.88 0.00 38.90 3.24
6305 6857 1.738350 AGACTGTCACGTCGTATCCTG 59.262 52.381 10.88 0.00 38.90 3.86
6306 6858 1.736126 GACTGTCACGTCGTATCCTGA 59.264 52.381 2.24 0.00 0.00 3.86
6309 6861 3.108881 CTGTCACGTCGTATCCTGATTG 58.891 50.000 0.00 0.00 0.00 2.67
6310 6862 2.159296 TGTCACGTCGTATCCTGATTGG 60.159 50.000 0.00 0.00 37.10 3.16
6319 6871 3.196040 TCCTGATTGGATGCAAGGC 57.804 52.632 5.69 0.77 40.56 4.35
6321 6873 1.187974 CCTGATTGGATGCAAGGCAA 58.812 50.000 5.69 0.00 43.62 4.52
6322 6874 1.760613 CCTGATTGGATGCAAGGCAAT 59.239 47.619 5.69 0.00 43.62 3.56
6323 6875 2.169769 CCTGATTGGATGCAAGGCAATT 59.830 45.455 5.69 0.00 43.62 2.32
6326 6878 4.025360 TGATTGGATGCAAGGCAATTAGT 58.975 39.130 5.69 0.00 43.62 2.24
6327 6879 4.098349 TGATTGGATGCAAGGCAATTAGTC 59.902 41.667 5.69 0.00 43.62 2.59
6328 6880 2.016318 TGGATGCAAGGCAATTAGTCG 58.984 47.619 0.00 0.00 43.62 4.18
6329 6881 1.268743 GGATGCAAGGCAATTAGTCGC 60.269 52.381 0.00 0.00 43.62 5.19
6330 6882 1.672881 GATGCAAGGCAATTAGTCGCT 59.327 47.619 0.00 0.00 43.62 4.93
6332 6884 0.524180 GCAAGGCAATTAGTCGCTGC 60.524 55.000 0.00 0.00 35.28 5.25
6337 6890 2.016961 CAATTAGTCGCTGCCGCAT 58.983 52.632 0.00 0.00 35.30 4.73
6353 6906 2.158058 CCGCATGGCAATTTTCAGTTTG 59.842 45.455 0.00 0.00 0.00 2.93
6361 6914 4.213906 GGCAATTTTCAGTTTGGAACATGG 59.786 41.667 0.00 0.00 39.30 3.66
6362 6915 4.319694 GCAATTTTCAGTTTGGAACATGGC 60.320 41.667 0.00 0.00 39.30 4.40
6371 6924 5.634859 CAGTTTGGAACATGGCAAATCTTAC 59.365 40.000 0.00 0.00 39.30 2.34
6372 6925 5.304101 AGTTTGGAACATGGCAAATCTTACA 59.696 36.000 0.00 0.00 39.30 2.41
6373 6926 4.782019 TGGAACATGGCAAATCTTACAC 57.218 40.909 0.00 0.00 0.00 2.90
6374 6927 4.148079 TGGAACATGGCAAATCTTACACA 58.852 39.130 0.00 0.00 0.00 3.72
6376 6929 5.163513 GGAACATGGCAAATCTTACACAAG 58.836 41.667 0.00 0.00 0.00 3.16
6377 6930 5.048083 GGAACATGGCAAATCTTACACAAGA 60.048 40.000 0.00 0.00 44.77 3.02
6382 6935 4.082625 TGGCAAATCTTACACAAGAGCATG 60.083 41.667 0.00 0.00 43.92 4.06
6384 6937 5.091431 GCAAATCTTACACAAGAGCATGAC 58.909 41.667 0.00 0.00 43.92 3.06
6385 6938 5.319139 CAAATCTTACACAAGAGCATGACG 58.681 41.667 0.00 0.00 43.92 4.35
6386 6939 2.337583 TCTTACACAAGAGCATGACGC 58.662 47.619 0.00 0.00 35.82 5.19
6387 6940 2.068519 CTTACACAAGAGCATGACGCA 58.931 47.619 0.00 0.00 46.13 5.24
6389 6942 1.527034 ACACAAGAGCATGACGCAAT 58.473 45.000 0.00 0.00 46.13 3.56
6390 6943 1.881973 ACACAAGAGCATGACGCAATT 59.118 42.857 0.00 0.00 46.13 2.32
6392 6945 3.501828 ACACAAGAGCATGACGCAATTTA 59.498 39.130 0.00 0.00 46.13 1.40
6395 6948 5.678483 CACAAGAGCATGACGCAATTTATAC 59.322 40.000 0.00 0.00 46.13 1.47
6403 6956 8.405531 AGCATGACGCAATTTATACTATGTTTT 58.594 29.630 0.00 0.00 46.13 2.43
6410 6963 6.343924 GCAATTTATACTATGTTTTCGCGTGC 60.344 38.462 5.77 0.00 0.00 5.34
6414 6967 1.196808 ACTATGTTTTCGCGTGCCAAG 59.803 47.619 5.77 0.00 0.00 3.61
6416 6969 2.729491 GTTTTCGCGTGCCAAGCC 60.729 61.111 5.77 0.00 0.00 4.35
6418 6971 3.192954 TTTTCGCGTGCCAAGCCTG 62.193 57.895 5.77 0.00 0.00 4.85
6423 6976 4.988598 CGTGCCAAGCCTGGACGT 62.989 66.667 5.23 0.00 46.92 4.34
6424 6977 2.594592 GTGCCAAGCCTGGACGTT 60.595 61.111 5.23 0.00 46.92 3.99
6425 6978 2.193536 GTGCCAAGCCTGGACGTTT 61.194 57.895 5.23 0.00 46.92 3.60
6427 6980 0.605319 TGCCAAGCCTGGACGTTTAG 60.605 55.000 5.23 0.00 46.92 1.85
6428 6981 1.923227 GCCAAGCCTGGACGTTTAGC 61.923 60.000 5.23 0.00 46.92 3.09
6430 6983 0.798776 CAAGCCTGGACGTTTAGCTG 59.201 55.000 0.00 0.00 33.18 4.24
6431 6984 0.321653 AAGCCTGGACGTTTAGCTGG 60.322 55.000 0.00 0.00 33.18 4.85
6432 6985 2.399356 GCCTGGACGTTTAGCTGGC 61.399 63.158 0.00 0.00 0.00 4.85
6433 6986 1.003839 CCTGGACGTTTAGCTGGCA 60.004 57.895 0.00 0.00 0.00 4.92
6435 6988 0.320771 CTGGACGTTTAGCTGGCAGT 60.321 55.000 17.16 5.61 0.00 4.40
6436 6989 0.320421 TGGACGTTTAGCTGGCAGTC 60.320 55.000 17.16 8.57 0.00 3.51
6437 6990 0.037232 GGACGTTTAGCTGGCAGTCT 60.037 55.000 17.16 15.47 0.00 3.24
6438 6991 1.351153 GACGTTTAGCTGGCAGTCTC 58.649 55.000 17.16 0.00 0.00 3.36
6439 6992 0.969894 ACGTTTAGCTGGCAGTCTCT 59.030 50.000 17.16 7.36 0.00 3.10
6441 6994 2.561419 ACGTTTAGCTGGCAGTCTCTAA 59.439 45.455 17.16 12.08 0.00 2.10
6442 6995 3.006537 ACGTTTAGCTGGCAGTCTCTAAA 59.993 43.478 17.16 16.93 0.00 1.85
6443 6996 3.994392 CGTTTAGCTGGCAGTCTCTAAAA 59.006 43.478 20.26 11.71 34.16 1.52
6446 6999 6.547283 GTTTAGCTGGCAGTCTCTAAAAATC 58.453 40.000 20.26 10.04 34.16 2.17
6447 7000 4.566426 AGCTGGCAGTCTCTAAAAATCT 57.434 40.909 17.16 0.00 0.00 2.40
6448 7001 4.260170 AGCTGGCAGTCTCTAAAAATCTG 58.740 43.478 17.16 0.00 0.00 2.90
6449 7002 3.376546 GCTGGCAGTCTCTAAAAATCTGG 59.623 47.826 17.16 0.00 0.00 3.86
6450 7003 4.583871 CTGGCAGTCTCTAAAAATCTGGT 58.416 43.478 6.28 0.00 0.00 4.00
6451 7004 4.326826 TGGCAGTCTCTAAAAATCTGGTG 58.673 43.478 0.00 0.00 0.00 4.17
6452 7005 4.202461 TGGCAGTCTCTAAAAATCTGGTGT 60.202 41.667 0.00 0.00 0.00 4.16
6455 7008 5.121454 GCAGTCTCTAAAAATCTGGTGTCAG 59.879 44.000 0.00 0.00 42.21 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.743718 CCCCGTTCTCTGTGTGCT 59.256 61.111 0.00 0.00 0.00 4.40
2 3 2.358737 CCCCCGTTCTCTGTGTGC 60.359 66.667 0.00 0.00 0.00 4.57
6 7 0.471211 TGAACTCCCCCGTTCTCTGT 60.471 55.000 5.43 0.00 42.82 3.41
7 8 0.037232 GTGAACTCCCCCGTTCTCTG 60.037 60.000 5.43 0.00 42.82 3.35
8 9 0.178929 AGTGAACTCCCCCGTTCTCT 60.179 55.000 5.43 4.32 42.82 3.10
9 10 0.246910 GAGTGAACTCCCCCGTTCTC 59.753 60.000 0.00 2.27 42.82 2.87
10 11 0.178929 AGAGTGAACTCCCCCGTTCT 60.179 55.000 6.84 0.00 43.88 3.01
11 12 0.685660 AAGAGTGAACTCCCCCGTTC 59.314 55.000 6.84 0.00 43.88 3.95
12 13 0.685660 GAAGAGTGAACTCCCCCGTT 59.314 55.000 6.84 0.00 43.88 4.44
13 14 1.192803 GGAAGAGTGAACTCCCCCGT 61.193 60.000 6.84 0.00 43.88 5.28
14 15 1.192146 TGGAAGAGTGAACTCCCCCG 61.192 60.000 6.84 0.00 43.88 5.73
15 16 0.325272 GTGGAAGAGTGAACTCCCCC 59.675 60.000 6.84 8.85 43.88 5.40
16 17 1.353091 AGTGGAAGAGTGAACTCCCC 58.647 55.000 6.84 9.17 43.88 4.81
17 18 4.027437 AGATAGTGGAAGAGTGAACTCCC 58.973 47.826 6.84 3.21 43.88 4.30
18 19 5.420739 AGAAGATAGTGGAAGAGTGAACTCC 59.579 44.000 6.84 0.00 43.88 3.85
19 20 6.151985 TCAGAAGATAGTGGAAGAGTGAACTC 59.848 42.308 2.06 2.06 43.17 3.01
20 21 6.013379 TCAGAAGATAGTGGAAGAGTGAACT 58.987 40.000 0.00 0.00 0.00 3.01
21 22 6.274157 TCAGAAGATAGTGGAAGAGTGAAC 57.726 41.667 0.00 0.00 0.00 3.18
22 23 6.918067 TTCAGAAGATAGTGGAAGAGTGAA 57.082 37.500 0.00 0.00 0.00 3.18
23 24 6.721668 TCTTTCAGAAGATAGTGGAAGAGTGA 59.278 38.462 0.00 0.00 34.02 3.41
24 25 6.929625 TCTTTCAGAAGATAGTGGAAGAGTG 58.070 40.000 0.00 0.00 34.02 3.51
25 26 7.015682 TGTTCTTTCAGAAGATAGTGGAAGAGT 59.984 37.037 0.00 0.00 39.08 3.24
26 27 7.382110 TGTTCTTTCAGAAGATAGTGGAAGAG 58.618 38.462 0.00 0.00 39.08 2.85
27 28 7.303182 TGTTCTTTCAGAAGATAGTGGAAGA 57.697 36.000 0.00 0.00 41.35 2.87
28 29 7.969536 TTGTTCTTTCAGAAGATAGTGGAAG 57.030 36.000 0.00 0.00 41.35 3.46
37 38 9.613428 TCTCTGTTTTATTGTTCTTTCAGAAGA 57.387 29.630 0.00 0.00 40.07 2.87
38 39 9.657121 GTCTCTGTTTTATTGTTCTTTCAGAAG 57.343 33.333 0.00 0.00 34.42 2.85
39 40 9.173021 TGTCTCTGTTTTATTGTTCTTTCAGAA 57.827 29.630 0.00 0.00 31.81 3.02
50 51 8.479313 TGCTATGTACTGTCTCTGTTTTATTG 57.521 34.615 0.00 0.00 0.00 1.90
82 83 5.655893 ACCAACATTGCTTTTCGAAAATG 57.344 34.783 22.73 19.23 36.35 2.32
83 84 6.314896 TGAAACCAACATTGCTTTTCGAAAAT 59.685 30.769 22.73 6.22 34.21 1.82
84 85 5.639506 TGAAACCAACATTGCTTTTCGAAAA 59.360 32.000 21.35 21.35 34.21 2.29
88 89 5.462034 TTTGAAACCAACATTGCTTTTCG 57.538 34.783 10.16 0.00 34.21 3.46
89 90 7.014092 TCATTTGAAACCAACATTGCTTTTC 57.986 32.000 8.78 8.78 33.11 2.29
95 99 5.468592 TCCGATCATTTGAAACCAACATTG 58.531 37.500 0.00 0.00 0.00 2.82
103 107 8.638685 ATGATTTCAATCCGATCATTTGAAAC 57.361 30.769 20.66 16.49 46.30 2.78
106 110 7.571080 TGATGATTTCAATCCGATCATTTGA 57.429 32.000 0.00 0.00 39.81 2.69
108 112 8.472413 AGTTTGATGATTTCAATCCGATCATTT 58.528 29.630 0.00 0.00 43.73 2.32
109 113 8.004087 AGTTTGATGATTTCAATCCGATCATT 57.996 30.769 0.00 0.00 43.73 2.57
115 119 6.845302 TCTTGAGTTTGATGATTTCAATCCG 58.155 36.000 0.00 0.00 43.73 4.18
120 124 5.413833 GGAGCTCTTGAGTTTGATGATTTCA 59.586 40.000 14.64 0.00 0.00 2.69
121 125 5.413833 TGGAGCTCTTGAGTTTGATGATTTC 59.586 40.000 14.64 0.00 0.00 2.17
129 133 1.396301 GCGATGGAGCTCTTGAGTTTG 59.604 52.381 14.64 0.00 0.00 2.93
148 152 2.356194 CCCCTGCGCAAAACAAGC 60.356 61.111 13.05 0.00 0.00 4.01
156 160 1.522092 CAGAATAGACCCCTGCGCA 59.478 57.895 10.98 10.98 0.00 6.09
189 193 1.944024 GGTTTCCACACAACGATGTCA 59.056 47.619 0.00 0.00 37.82 3.58
198 202 2.112297 GCCTCGGGTTTCCACACA 59.888 61.111 0.00 0.00 0.00 3.72
237 241 1.208293 TGCTTGTGGTATACGGCATGA 59.792 47.619 0.00 0.00 36.31 3.07
286 293 5.215160 GTTGGAGCAGTGTAAAGTTTCATG 58.785 41.667 0.00 0.00 0.00 3.07
292 299 3.560636 ACTGTTGGAGCAGTGTAAAGT 57.439 42.857 0.00 0.00 46.72 2.66
331 339 4.253685 ACGAAGTGTGAAATGAGTATGGG 58.746 43.478 0.00 0.00 42.51 4.00
410 418 1.758592 CAGGTTCCCCCTCACGAAA 59.241 57.895 0.00 0.00 43.86 3.46
576 626 4.141018 GGGTATACACAATGGAGGGGAATT 60.141 45.833 5.01 0.00 0.00 2.17
647 699 8.410673 TCAGAAGTTCAGAACTAGTACATCTT 57.589 34.615 16.46 0.00 41.91 2.40
727 784 1.156736 ACAGCTGAAAATTCGTCGGG 58.843 50.000 23.35 0.00 0.00 5.14
785 842 5.051153 TCTGCAAATTCGTACACAGTACAA 58.949 37.500 7.93 2.53 0.00 2.41
786 843 4.623002 TCTGCAAATTCGTACACAGTACA 58.377 39.130 7.93 0.00 0.00 2.90
787 844 4.091509 CCTCTGCAAATTCGTACACAGTAC 59.908 45.833 0.00 0.00 0.00 2.73
794 851 2.346803 TGAGCCTCTGCAAATTCGTAC 58.653 47.619 0.00 0.00 41.13 3.67
796 853 1.446907 CTGAGCCTCTGCAAATTCGT 58.553 50.000 0.00 0.00 41.13 3.85
830 887 1.286354 CTCCCTTCGTTTACGCGCAA 61.286 55.000 5.73 0.00 39.60 4.85
833 890 0.989890 CTTCTCCCTTCGTTTACGCG 59.010 55.000 3.53 3.53 39.60 6.01
864 922 3.857052 TCATTGAGGGCTTAACGTACAG 58.143 45.455 0.00 0.00 0.00 2.74
881 939 2.525105 AAACCCCATACCGCTTCATT 57.475 45.000 0.00 0.00 0.00 2.57
899 957 2.825532 GTTCAGCCAGCCTTATCCAAAA 59.174 45.455 0.00 0.00 0.00 2.44
981 1039 2.588034 GCCGCCGGAATGGTAGTC 60.588 66.667 7.68 0.00 41.21 2.59
1022 1085 0.106619 GCGGAGGGAGAGGTTAGAGA 60.107 60.000 0.00 0.00 0.00 3.10
1024 1087 1.076192 GGCGGAGGGAGAGGTTAGA 60.076 63.158 0.00 0.00 0.00 2.10
1026 1089 1.076192 GAGGCGGAGGGAGAGGTTA 60.076 63.158 0.00 0.00 0.00 2.85
1044 1107 1.632018 TAAAGGGGAGTGCCGATGGG 61.632 60.000 0.00 0.00 33.83 4.00
1047 1110 1.520666 CGTAAAGGGGAGTGCCGAT 59.479 57.895 0.00 0.00 33.83 4.18
1061 1124 0.401356 GGTGGGGAAGGAAACCGTAA 59.599 55.000 0.00 0.00 0.00 3.18
1065 1128 2.035155 CGGGTGGGGAAGGAAACC 59.965 66.667 0.00 0.00 0.00 3.27
1129 1195 2.361992 TGCTAGGGTTCGCGAGGA 60.362 61.111 9.59 0.00 0.00 3.71
1176 1242 2.604686 TCCAACCGCAGCTCCTCT 60.605 61.111 0.00 0.00 0.00 3.69
1299 1365 2.277072 CTCTCCTCCCGGCTCTGA 59.723 66.667 0.00 0.00 0.00 3.27
1534 1602 3.806949 AGTTAAGCTGAACCAATCCCA 57.193 42.857 10.57 0.00 0.00 4.37
1567 1637 7.867909 CCAAATCACTACATTCTAGCTCGATTA 59.132 37.037 0.00 0.00 0.00 1.75
1578 1648 6.867816 TGCATTTCAACCAAATCACTACATTC 59.132 34.615 0.00 0.00 31.79 2.67
1616 1692 7.647827 TGAAATGGAACCAGGGAGATTTTATA 58.352 34.615 0.00 0.00 0.00 0.98
1662 1738 2.125106 GCGCTGAACCTACTGGGG 60.125 66.667 0.00 0.00 40.03 4.96
1688 1765 4.855715 TGTTGTGTTTCAGTGTTCCAAA 57.144 36.364 0.00 0.00 0.00 3.28
1690 1767 3.064682 CGATGTTGTGTTTCAGTGTTCCA 59.935 43.478 0.00 0.00 0.00 3.53
1718 1807 5.218885 CCTTATGAGCTACACTGATTCGAG 58.781 45.833 0.00 0.00 0.00 4.04
1765 1854 5.700373 TGCATTCAGAATTTTAGCCCAAAAC 59.300 36.000 0.00 0.00 38.90 2.43
1825 1915 7.905604 ACATACAGAAAATCGTTCATCAAGA 57.094 32.000 0.00 0.00 0.00 3.02
1856 1946 8.750416 CGAATTCAACAATGTTGTGTTTCAATA 58.250 29.630 23.41 0.46 41.31 1.90
1911 2175 3.939088 GCAATTGCACAAACAAACCTTC 58.061 40.909 25.36 0.00 41.59 3.46
1943 2207 4.618927 GCACTGCATTCAAAATCTTAGCCA 60.619 41.667 0.00 0.00 0.00 4.75
1950 2214 1.736696 CGGGGCACTGCATTCAAAATC 60.737 52.381 2.82 0.00 0.00 2.17
1978 2242 5.061853 AGCTGAGTTGCATAACTGGATATG 58.938 41.667 0.00 0.00 46.79 1.78
2010 2274 5.254901 TGCCACCGGTAAAAATAATACTGT 58.745 37.500 6.87 0.00 0.00 3.55
2011 2275 5.821516 TGCCACCGGTAAAAATAATACTG 57.178 39.130 6.87 0.00 0.00 2.74
2012 2276 6.362248 AGATGCCACCGGTAAAAATAATACT 58.638 36.000 6.87 0.00 0.00 2.12
2013 2277 6.628919 AGATGCCACCGGTAAAAATAATAC 57.371 37.500 6.87 0.00 0.00 1.89
2014 2278 8.749026 TTAAGATGCCACCGGTAAAAATAATA 57.251 30.769 6.87 0.00 0.00 0.98
2028 2292 5.634859 CCAACAAAATGTCTTAAGATGCCAC 59.365 40.000 8.75 0.00 0.00 5.01
2042 2306 4.240096 GCAGAGGATGAACCAACAAAATG 58.760 43.478 0.00 0.00 42.04 2.32
2157 2422 0.394216 TGGCCCGATCAAGAACCATG 60.394 55.000 0.00 0.00 0.00 3.66
2163 2428 2.178876 TTTCGCTGGCCCGATCAAGA 62.179 55.000 0.00 0.00 37.06 3.02
2219 2484 1.967066 ACAGGGATTCTAGCATCTCGG 59.033 52.381 1.10 1.10 0.00 4.63
2319 2584 3.181505 TGTGTGAAGCTTTAACACCAACG 60.182 43.478 29.04 0.00 42.81 4.10
2388 2653 1.488527 GCTCCATAAAGTAGGTCGCG 58.511 55.000 0.00 0.00 0.00 5.87
2466 2731 1.656652 CCAATACTGCCAACTCCTCG 58.343 55.000 0.00 0.00 0.00 4.63
2490 2755 6.017523 GGGAATCTGCTATTCTTGAAGTTAGC 60.018 42.308 17.08 17.08 38.01 3.09
2511 2776 0.108329 GCCTGATCTTCGTTCGGGAA 60.108 55.000 2.73 0.00 41.43 3.97
2517 2782 3.379372 CCATCAAATGCCTGATCTTCGTT 59.621 43.478 0.00 0.00 33.66 3.85
2548 2813 2.600729 AAGCCAGGTCCAGCTCCAG 61.601 63.158 6.87 0.00 38.74 3.86
2630 2895 1.296715 GGGTCCGATTCACTGCTGT 59.703 57.895 0.00 0.00 0.00 4.40
2700 2965 1.915141 CAATGCCAAGGGACTGTTCT 58.085 50.000 0.00 0.00 40.86 3.01
2715 2980 1.097232 TGGCCGATTCTTCTGCAATG 58.903 50.000 0.00 0.00 34.09 2.82
2717 2982 0.960364 GGTGGCCGATTCTTCTGCAA 60.960 55.000 0.00 0.00 34.09 4.08
2720 2985 0.036010 AGTGGTGGCCGATTCTTCTG 60.036 55.000 0.00 0.00 0.00 3.02
2729 2994 2.594303 TTGCTTCAGTGGTGGCCG 60.594 61.111 0.00 0.00 0.00 6.13
2731 2996 0.819259 TCAGTTGCTTCAGTGGTGGC 60.819 55.000 0.00 0.00 0.00 5.01
2732 2997 1.605710 CTTCAGTTGCTTCAGTGGTGG 59.394 52.381 0.00 0.00 0.00 4.61
2733 2998 2.032550 CACTTCAGTTGCTTCAGTGGTG 59.967 50.000 0.00 0.00 32.74 4.17
2758 3023 4.153117 GTGGTCTTCAGATAGCTGTTGTTG 59.847 45.833 8.04 0.00 42.84 3.33
2761 3026 3.265791 GGTGGTCTTCAGATAGCTGTTG 58.734 50.000 8.04 2.46 42.84 3.33
3370 3635 3.057033 CGGTACTTCCCCATAATACTCGG 60.057 52.174 0.00 0.00 0.00 4.63
3448 3713 1.271325 ACCCATTCTTGTGCACGATCA 60.271 47.619 13.13 0.00 0.00 2.92
3532 3797 3.181443 GGGACTCCAGAAGGTTTCTTTCA 60.181 47.826 0.00 0.00 38.11 2.69
3633 3898 5.432645 TCACTACTGTGGAAATGTCAAACA 58.567 37.500 0.00 0.00 43.94 2.83
3634 3899 6.560253 ATCACTACTGTGGAAATGTCAAAC 57.440 37.500 0.00 0.00 43.94 2.93
3695 3962 6.686253 GCTTCTAAGCGAATCTTCAAAATCAG 59.314 38.462 0.00 0.00 42.88 2.90
3841 4108 8.651391 TGTACTGTTCAAGTTTCGAATTCTTA 57.349 30.769 13.23 0.87 40.56 2.10
3948 4215 7.527457 AGGAACATATAAACTCTTGTTTTCGC 58.473 34.615 0.00 0.00 43.13 4.70
3949 4216 8.717821 TGAGGAACATATAAACTCTTGTTTTCG 58.282 33.333 0.00 0.00 43.13 3.46
3982 4249 4.750098 AGTCCTTCAACATACACTTTGTCG 59.250 41.667 0.00 0.00 0.00 4.35
4180 4447 5.804473 CAGCTGGACAATCTATTATAGAGCG 59.196 44.000 5.57 4.04 38.38 5.03
4196 4463 4.257267 ACCAAAATAAAAGCAGCTGGAC 57.743 40.909 17.12 0.00 0.00 4.02
4264 4539 2.005971 GTGGCTACACTAGGTTTCCG 57.994 55.000 0.00 0.00 44.29 4.30
4343 4623 1.605710 CAAGGACACAGCAGTCAAAGG 59.394 52.381 6.35 0.00 40.29 3.11
4374 4733 6.808212 ACCTCAGCAAAATATCATTTGAAACG 59.192 34.615 4.40 0.00 41.73 3.60
4377 4736 8.125978 AGAACCTCAGCAAAATATCATTTGAA 57.874 30.769 4.40 0.00 41.73 2.69
4393 4752 1.554160 AGATGCCAGTGAGAACCTCAG 59.446 52.381 0.00 0.00 41.46 3.35
4415 4774 6.688073 TTTGAATAGGGTCTGAGAAGAACT 57.312 37.500 0.00 0.00 0.00 3.01
4486 4845 3.054139 ACAACAGCACATGATGGGACTAT 60.054 43.478 0.00 0.00 36.07 2.12
4658 5027 1.227263 CCAGTCGTCTAATGGGGCG 60.227 63.158 0.00 0.00 0.00 6.13
4758 5127 1.206523 GGAGCGTACCGACATAAAGC 58.793 55.000 0.00 0.00 0.00 3.51
4970 5348 1.038681 GGTGCATGCATGGATCCACA 61.039 55.000 25.64 12.43 0.00 4.17
4998 5376 8.202811 CCTACATGATATATGATGGGAGTTCAG 58.797 40.741 15.42 2.73 0.00 3.02
5026 5404 3.211045 ACCATACAACCAATCATACGCC 58.789 45.455 0.00 0.00 0.00 5.68
5039 5417 8.255206 AGATAATAGACAACGTTGACCATACAA 58.745 33.333 33.66 12.01 0.00 2.41
5047 5425 8.002984 TGGTGATAGATAATAGACAACGTTGA 57.997 34.615 33.66 13.02 0.00 3.18
5052 5430 7.445945 AGGCTTGGTGATAGATAATAGACAAC 58.554 38.462 0.00 0.00 0.00 3.32
5071 5449 4.553323 CAAGATTGAAGAACCAAGGCTTG 58.447 43.478 20.31 20.31 36.73 4.01
5072 5450 3.006217 GCAAGATTGAAGAACCAAGGCTT 59.994 43.478 0.00 0.00 0.00 4.35
5073 5451 2.560105 GCAAGATTGAAGAACCAAGGCT 59.440 45.455 0.00 0.00 0.00 4.58
5074 5452 2.353109 GGCAAGATTGAAGAACCAAGGC 60.353 50.000 0.00 0.00 0.00 4.35
5075 5453 2.232208 GGGCAAGATTGAAGAACCAAGG 59.768 50.000 0.00 0.00 0.00 3.61
5076 5454 3.057033 CAGGGCAAGATTGAAGAACCAAG 60.057 47.826 0.00 0.00 0.00 3.61
5080 5458 5.824624 TGATATCAGGGCAAGATTGAAGAAC 59.175 40.000 0.00 0.00 0.00 3.01
5083 5461 4.518211 GGTGATATCAGGGCAAGATTGAAG 59.482 45.833 5.42 0.00 0.00 3.02
5099 5477 1.492176 CAGAACAGGGCCTGGTGATAT 59.508 52.381 35.34 12.48 35.51 1.63
5100 5478 0.911769 CAGAACAGGGCCTGGTGATA 59.088 55.000 35.34 0.00 35.51 2.15
5123 5570 4.445052 CACCGTAGACGTAAAACATCAACA 59.555 41.667 0.85 0.00 37.74 3.33
5476 5923 1.433053 CCGCCGCCATCGATTTGTAA 61.433 55.000 0.00 0.00 38.10 2.41
5500 5947 1.595993 TACGGAGTGGAGCAGTCAGC 61.596 60.000 0.00 0.00 45.73 4.26
5501 5948 0.171455 GTACGGAGTGGAGCAGTCAG 59.829 60.000 0.00 0.00 45.73 3.51
5502 5949 1.248785 GGTACGGAGTGGAGCAGTCA 61.249 60.000 0.00 0.00 45.73 3.41
5504 5951 0.542232 AAGGTACGGAGTGGAGCAGT 60.542 55.000 0.00 0.00 45.73 4.40
5506 5953 1.180029 GTAAGGTACGGAGTGGAGCA 58.820 55.000 0.00 0.00 45.73 4.26
5508 5955 1.134560 GCTGTAAGGTACGGAGTGGAG 59.865 57.143 0.00 0.00 45.73 3.86
5509 5956 1.180029 GCTGTAAGGTACGGAGTGGA 58.820 55.000 0.00 0.00 45.73 4.02
5513 5960 0.525668 CGCTGCTGTAAGGTACGGAG 60.526 60.000 0.00 0.00 37.22 4.63
5514 5961 0.961857 TCGCTGCTGTAAGGTACGGA 60.962 55.000 0.00 0.00 37.22 4.69
5515 5962 0.801067 GTCGCTGCTGTAAGGTACGG 60.801 60.000 0.00 0.00 38.10 4.02
5516 5963 0.109458 TGTCGCTGCTGTAAGGTACG 60.109 55.000 0.00 0.00 0.00 3.67
5517 5964 1.630148 CTGTCGCTGCTGTAAGGTAC 58.370 55.000 0.00 0.00 0.00 3.34
5518 5965 0.108804 GCTGTCGCTGCTGTAAGGTA 60.109 55.000 0.00 0.00 0.00 3.08
5519 5966 1.374758 GCTGTCGCTGCTGTAAGGT 60.375 57.895 0.00 0.00 0.00 3.50
5520 5967 1.079543 AGCTGTCGCTGCTGTAAGG 60.080 57.895 9.65 0.00 46.86 2.69
5521 5968 4.586618 AGCTGTCGCTGCTGTAAG 57.413 55.556 9.65 0.00 46.86 2.34
5550 6007 2.916640 TGCTTGTGTGTCATCTGTGAA 58.083 42.857 0.00 0.00 35.80 3.18
5558 6015 2.988010 ACTCTCTTGCTTGTGTGTCA 57.012 45.000 0.00 0.00 0.00 3.58
5559 6016 3.462021 AGAACTCTCTTGCTTGTGTGTC 58.538 45.455 0.00 0.00 0.00 3.67
5560 6017 3.462021 GAGAACTCTCTTGCTTGTGTGT 58.538 45.455 0.00 0.00 39.81 3.72
5561 6018 2.805099 GGAGAACTCTCTTGCTTGTGTG 59.195 50.000 6.68 0.00 42.48 3.82
5562 6019 2.703007 AGGAGAACTCTCTTGCTTGTGT 59.297 45.455 6.68 0.00 42.48 3.72
5563 6020 3.065655 CAGGAGAACTCTCTTGCTTGTG 58.934 50.000 5.97 0.00 41.95 3.33
5564 6021 3.399440 CAGGAGAACTCTCTTGCTTGT 57.601 47.619 5.97 0.00 41.95 3.16
5572 6029 2.484889 ACAAAACGCAGGAGAACTCTC 58.515 47.619 0.00 0.00 42.14 3.20
5588 6045 9.615295 GTTGTGTGTTTTACTTTTCTCTACAAA 57.385 29.630 0.00 0.00 0.00 2.83
5601 6058 5.554822 TCCAACTCTGTTGTGTGTTTTAC 57.445 39.130 9.20 0.00 0.00 2.01
5602 6059 5.708230 AGTTCCAACTCTGTTGTGTGTTTTA 59.292 36.000 9.20 0.00 32.86 1.52
5604 6061 4.079253 AGTTCCAACTCTGTTGTGTGTTT 58.921 39.130 9.20 0.00 32.86 2.83
5605 6062 3.686016 AGTTCCAACTCTGTTGTGTGTT 58.314 40.909 9.20 0.00 32.86 3.32
5645 6127 5.985781 TGAGAAACTCTGTTGCGTAATTTC 58.014 37.500 0.00 0.00 0.00 2.17
5666 6148 5.236655 TGTAAACAACAGTTTCGCATTGA 57.763 34.783 0.00 0.00 36.83 2.57
5668 6150 5.826586 TGATGTAAACAACAGTTTCGCATT 58.173 33.333 0.00 0.00 42.70 3.56
5669 6151 5.238432 TCTGATGTAAACAACAGTTTCGCAT 59.762 36.000 16.84 4.33 44.16 4.73
5670 6152 4.572795 TCTGATGTAAACAACAGTTTCGCA 59.427 37.500 16.84 0.00 44.16 5.10
5671 6153 5.090652 TCTGATGTAAACAACAGTTTCGC 57.909 39.130 16.84 0.00 44.16 4.70
5675 6157 9.167311 GGATATCTTCTGATGTAAACAACAGTT 57.833 33.333 16.84 6.67 44.16 3.16
5676 6158 8.321353 TGGATATCTTCTGATGTAAACAACAGT 58.679 33.333 16.84 4.12 44.16 3.55
5681 6163 7.933577 GTGGATGGATATCTTCTGATGTAAACA 59.066 37.037 2.05 0.00 34.32 2.83
5682 6164 7.116948 CGTGGATGGATATCTTCTGATGTAAAC 59.883 40.741 2.05 0.00 34.32 2.01
5683 6165 7.154656 CGTGGATGGATATCTTCTGATGTAAA 58.845 38.462 2.05 0.00 34.32 2.01
5690 6184 2.332104 CGCGTGGATGGATATCTTCTG 58.668 52.381 0.00 0.00 33.68 3.02
5709 6203 1.378514 CTCAATTCCACCCCCACCG 60.379 63.158 0.00 0.00 0.00 4.94
5732 6226 1.852157 TTCCTCCCATGTCACCAGGC 61.852 60.000 0.00 0.00 0.00 4.85
5744 6238 0.840722 TCCAACACCCTCTTCCTCCC 60.841 60.000 0.00 0.00 0.00 4.30
5748 6242 0.840722 TCCCTCCAACACCCTCTTCC 60.841 60.000 0.00 0.00 0.00 3.46
5755 6249 2.032071 CCGTGTCCCTCCAACACC 59.968 66.667 1.17 0.00 43.24 4.16
5756 6250 2.032071 CCCGTGTCCCTCCAACAC 59.968 66.667 0.00 0.00 42.83 3.32
5757 6251 2.446994 ACCCGTGTCCCTCCAACA 60.447 61.111 0.00 0.00 0.00 3.33
5790 6284 4.082125 CCATTACATTAATCCCTGCCTCC 58.918 47.826 0.00 0.00 0.00 4.30
5794 6288 3.005791 GTGCCCATTACATTAATCCCTGC 59.994 47.826 0.00 0.00 0.00 4.85
5819 6313 0.883833 CCACCAGAATCAACCAGCAC 59.116 55.000 0.00 0.00 0.00 4.40
5928 6422 0.175302 CTCCAGAGAAGCGCACTGAT 59.825 55.000 11.47 0.00 37.38 2.90
5931 6425 2.264166 GCTCCAGAGAAGCGCACT 59.736 61.111 11.47 8.76 0.00 4.40
5932 6426 3.184683 CGCTCCAGAGAAGCGCAC 61.185 66.667 11.47 2.78 44.91 5.34
5936 6430 0.532417 ATGCATCGCTCCAGAGAAGC 60.532 55.000 0.00 1.13 38.65 3.86
5938 6432 0.179065 CCATGCATCGCTCCAGAGAA 60.179 55.000 0.00 0.00 0.00 2.87
5939 6433 1.444672 CCATGCATCGCTCCAGAGA 59.555 57.895 0.00 0.00 0.00 3.10
5940 6434 1.597302 CCCATGCATCGCTCCAGAG 60.597 63.158 0.00 0.00 0.00 3.35
5942 6436 3.285215 GCCCATGCATCGCTCCAG 61.285 66.667 0.00 0.00 37.47 3.86
5943 6437 4.112433 TGCCCATGCATCGCTCCA 62.112 61.111 14.65 0.00 44.23 3.86
6014 6508 3.957586 CCCTGGCAGCACTGGTGA 61.958 66.667 9.56 0.00 32.22 4.02
6051 6545 1.347097 CGTCCTCACGTGATGCACTG 61.347 60.000 20.40 5.95 41.42 3.66
6054 6548 2.261361 CCGTCCTCACGTGATGCA 59.739 61.111 20.40 2.70 45.17 3.96
6055 6549 1.805945 GTCCGTCCTCACGTGATGC 60.806 63.158 20.40 11.01 45.17 3.91
6056 6550 0.456824 CAGTCCGTCCTCACGTGATG 60.457 60.000 20.40 16.87 45.17 3.07
6057 6551 1.883732 CAGTCCGTCCTCACGTGAT 59.116 57.895 20.40 0.00 45.17 3.06
6058 6552 2.916052 GCAGTCCGTCCTCACGTGA 61.916 63.158 18.88 18.88 45.17 4.35
6059 6553 2.430921 GCAGTCCGTCCTCACGTG 60.431 66.667 9.94 9.94 45.17 4.49
6060 6554 2.910479 TGCAGTCCGTCCTCACGT 60.910 61.111 0.00 0.00 45.17 4.49
6061 6555 2.430921 GTGCAGTCCGTCCTCACG 60.431 66.667 0.00 0.00 46.29 4.35
6062 6556 0.946221 CTTGTGCAGTCCGTCCTCAC 60.946 60.000 0.00 0.00 0.00 3.51
6063 6557 1.112916 TCTTGTGCAGTCCGTCCTCA 61.113 55.000 0.00 0.00 0.00 3.86
6064 6558 0.033504 TTCTTGTGCAGTCCGTCCTC 59.966 55.000 0.00 0.00 0.00 3.71
6065 6559 0.249911 GTTCTTGTGCAGTCCGTCCT 60.250 55.000 0.00 0.00 0.00 3.85
6066 6560 0.531974 TGTTCTTGTGCAGTCCGTCC 60.532 55.000 0.00 0.00 0.00 4.79
6069 6563 1.939934 TCTTTGTTCTTGTGCAGTCCG 59.060 47.619 0.00 0.00 0.00 4.79
6071 6565 2.945668 ACCTCTTTGTTCTTGTGCAGTC 59.054 45.455 0.00 0.00 0.00 3.51
6072 6566 3.004752 ACCTCTTTGTTCTTGTGCAGT 57.995 42.857 0.00 0.00 0.00 4.40
6073 6567 4.816385 TCTTACCTCTTTGTTCTTGTGCAG 59.184 41.667 0.00 0.00 0.00 4.41
6074 6568 4.776349 TCTTACCTCTTTGTTCTTGTGCA 58.224 39.130 0.00 0.00 0.00 4.57
6075 6569 5.470098 TGATCTTACCTCTTTGTTCTTGTGC 59.530 40.000 0.00 0.00 0.00 4.57
6076 6570 6.708054 AGTGATCTTACCTCTTTGTTCTTGTG 59.292 38.462 0.00 0.00 0.00 3.33
6077 6571 6.831976 AGTGATCTTACCTCTTTGTTCTTGT 58.168 36.000 0.00 0.00 0.00 3.16
6078 6572 6.090088 CGAGTGATCTTACCTCTTTGTTCTTG 59.910 42.308 0.00 0.00 0.00 3.02
6081 6577 4.327627 GCGAGTGATCTTACCTCTTTGTTC 59.672 45.833 0.00 0.00 0.00 3.18
6084 6580 2.854777 CGCGAGTGATCTTACCTCTTTG 59.145 50.000 0.00 0.00 0.00 2.77
6087 6583 1.025812 CCGCGAGTGATCTTACCTCT 58.974 55.000 8.23 0.00 0.00 3.69
6095 6591 3.374330 CGTTGACCGCGAGTGATC 58.626 61.111 8.23 0.00 0.00 2.92
6105 6601 2.388232 CGCTGGTTAGGCGTTGACC 61.388 63.158 0.00 5.07 46.37 4.02
6129 6637 7.878555 AATGTTATCATCAGCAGACAGCCGT 62.879 44.000 0.00 0.00 37.33 5.68
6130 6638 5.509469 AATGTTATCATCAGCAGACAGCCG 61.509 45.833 0.00 0.00 37.33 5.52
6131 6639 3.881688 AATGTTATCATCAGCAGACAGCC 59.118 43.478 0.00 0.00 37.33 4.85
6132 6640 6.609237 TTAATGTTATCATCAGCAGACAGC 57.391 37.500 0.00 0.00 37.04 4.40
6133 6641 8.206325 AGTTTAATGTTATCATCAGCAGACAG 57.794 34.615 0.00 0.00 32.56 3.51
6134 6642 7.280876 GGAGTTTAATGTTATCATCAGCAGACA 59.719 37.037 0.00 0.00 32.56 3.41
6135 6643 7.517417 CGGAGTTTAATGTTATCATCAGCAGAC 60.517 40.741 0.00 0.00 32.56 3.51
6136 6644 6.479990 CGGAGTTTAATGTTATCATCAGCAGA 59.520 38.462 0.00 0.00 32.56 4.26
6137 6645 6.258727 ACGGAGTTTAATGTTATCATCAGCAG 59.741 38.462 0.00 0.00 37.78 4.24
6157 6700 8.723311 TGTATATTGTGGTTTAAAGAAACGGAG 58.277 33.333 0.00 0.00 45.06 4.63
6158 6701 8.618702 TGTATATTGTGGTTTAAAGAAACGGA 57.381 30.769 0.00 0.00 45.06 4.69
6159 6702 9.498307 GATGTATATTGTGGTTTAAAGAAACGG 57.502 33.333 0.00 0.00 45.06 4.44
6160 6703 9.498307 GGATGTATATTGTGGTTTAAAGAAACG 57.502 33.333 0.00 0.00 45.06 3.60
6161 6704 9.498307 CGGATGTATATTGTGGTTTAAAGAAAC 57.502 33.333 0.00 0.00 43.65 2.78
6162 6705 9.451002 TCGGATGTATATTGTGGTTTAAAGAAA 57.549 29.630 0.00 0.00 0.00 2.52
6163 6706 9.621629 ATCGGATGTATATTGTGGTTTAAAGAA 57.378 29.630 0.00 0.00 0.00 2.52
6164 6707 9.051679 CATCGGATGTATATTGTGGTTTAAAGA 57.948 33.333 9.85 0.00 0.00 2.52
6165 6708 7.803189 GCATCGGATGTATATTGTGGTTTAAAG 59.197 37.037 18.54 0.00 0.00 1.85
6169 6712 4.518970 GGCATCGGATGTATATTGTGGTTT 59.481 41.667 18.54 0.00 0.00 3.27
6170 6713 4.072131 GGCATCGGATGTATATTGTGGTT 58.928 43.478 18.54 0.00 0.00 3.67
6171 6714 3.072330 TGGCATCGGATGTATATTGTGGT 59.928 43.478 18.54 0.00 0.00 4.16
6172 6715 3.673902 TGGCATCGGATGTATATTGTGG 58.326 45.455 18.54 0.00 0.00 4.17
6187 6739 4.436332 CCCAAAGCTAAAAATCTGGCATC 58.564 43.478 0.00 0.00 0.00 3.91
6191 6743 4.563374 CCAACCCCAAAGCTAAAAATCTGG 60.563 45.833 0.00 0.00 0.00 3.86
6196 6748 2.403561 AGCCAACCCCAAAGCTAAAAA 58.596 42.857 0.00 0.00 32.73 1.94
6203 6755 4.018409 GCCTAGCCAACCCCAAAG 57.982 61.111 0.00 0.00 0.00 2.77
6214 6766 2.809010 GGTCGACTGAGGCCTAGC 59.191 66.667 16.46 0.00 32.02 3.42
6215 6767 1.440938 CTCGGTCGACTGAGGCCTAG 61.441 65.000 36.62 18.15 43.83 3.02
6216 6768 1.451567 CTCGGTCGACTGAGGCCTA 60.452 63.158 36.62 12.88 43.83 3.93
6217 6769 2.559922 ATCTCGGTCGACTGAGGCCT 62.560 60.000 40.33 27.45 46.70 5.19
6219 6771 0.173708 AAATCTCGGTCGACTGAGGC 59.826 55.000 40.33 15.30 46.70 4.70
6226 6778 4.976224 TCTGTGATTAAATCTCGGTCGA 57.024 40.909 0.00 0.00 32.48 4.20
6228 6780 8.304596 TGGTATATCTGTGATTAAATCTCGGTC 58.695 37.037 0.00 0.00 32.48 4.79
6229 6781 8.190326 TGGTATATCTGTGATTAAATCTCGGT 57.810 34.615 0.00 0.00 32.48 4.69
6230 6782 9.091784 CATGGTATATCTGTGATTAAATCTCGG 57.908 37.037 0.00 0.00 0.00 4.63
6231 6783 9.091784 CCATGGTATATCTGTGATTAAATCTCG 57.908 37.037 2.57 0.00 0.00 4.04
6232 6784 9.388506 CCCATGGTATATCTGTGATTAAATCTC 57.611 37.037 11.73 0.00 0.00 2.75
6233 6785 8.894592 ACCCATGGTATATCTGTGATTAAATCT 58.105 33.333 11.73 0.00 32.11 2.40
6234 6786 9.520515 AACCCATGGTATATCTGTGATTAAATC 57.479 33.333 11.73 0.00 33.12 2.17
6238 6790 9.387397 TCTTAACCCATGGTATATCTGTGATTA 57.613 33.333 11.73 0.00 33.12 1.75
6239 6791 8.157476 GTCTTAACCCATGGTATATCTGTGATT 58.843 37.037 11.73 0.00 33.12 2.57
6241 6793 6.844388 AGTCTTAACCCATGGTATATCTGTGA 59.156 38.462 11.73 0.00 33.12 3.58
6242 6794 7.067496 AGTCTTAACCCATGGTATATCTGTG 57.933 40.000 11.73 0.00 33.12 3.66
6243 6795 7.347222 TCAAGTCTTAACCCATGGTATATCTGT 59.653 37.037 11.73 0.00 33.12 3.41
6244 6796 7.735917 TCAAGTCTTAACCCATGGTATATCTG 58.264 38.462 11.73 0.00 33.12 2.90
6245 6797 7.789831 TCTCAAGTCTTAACCCATGGTATATCT 59.210 37.037 11.73 0.00 33.12 1.98
6247 6799 7.931015 TCTCAAGTCTTAACCCATGGTATAT 57.069 36.000 11.73 0.00 33.12 0.86
6249 6801 6.183361 GGATCTCAAGTCTTAACCCATGGTAT 60.183 42.308 11.73 0.93 33.12 2.73
6250 6802 5.130477 GGATCTCAAGTCTTAACCCATGGTA 59.870 44.000 11.73 0.00 33.12 3.25
6251 6803 4.080299 GGATCTCAAGTCTTAACCCATGGT 60.080 45.833 11.73 0.00 37.65 3.55
6252 6804 4.080356 TGGATCTCAAGTCTTAACCCATGG 60.080 45.833 4.14 4.14 0.00 3.66
6253 6805 5.102953 TGGATCTCAAGTCTTAACCCATG 57.897 43.478 0.00 0.00 0.00 3.66
6254 6806 5.032846 TCTGGATCTCAAGTCTTAACCCAT 58.967 41.667 0.00 0.00 0.00 4.00
6257 6809 7.225734 GCTAAATCTGGATCTCAAGTCTTAACC 59.774 40.741 0.00 0.00 0.00 2.85
6261 6813 6.305272 TGCTAAATCTGGATCTCAAGTCTT 57.695 37.500 0.00 0.00 0.00 3.01
6262 6814 5.946942 TGCTAAATCTGGATCTCAAGTCT 57.053 39.130 0.00 0.00 0.00 3.24
6263 6815 6.257630 GTCTTGCTAAATCTGGATCTCAAGTC 59.742 42.308 0.00 0.00 33.48 3.01
6266 6818 6.111382 CAGTCTTGCTAAATCTGGATCTCAA 58.889 40.000 0.00 0.00 0.00 3.02
6267 6819 5.188555 ACAGTCTTGCTAAATCTGGATCTCA 59.811 40.000 0.00 0.00 0.00 3.27
6268 6820 5.669477 ACAGTCTTGCTAAATCTGGATCTC 58.331 41.667 0.00 0.00 0.00 2.75
6270 6822 5.293079 GTGACAGTCTTGCTAAATCTGGATC 59.707 44.000 1.31 0.00 0.00 3.36
6271 6823 5.181748 GTGACAGTCTTGCTAAATCTGGAT 58.818 41.667 1.31 0.00 0.00 3.41
6272 6824 4.569943 GTGACAGTCTTGCTAAATCTGGA 58.430 43.478 1.31 0.00 0.00 3.86
6275 6827 4.238514 GACGTGACAGTCTTGCTAAATCT 58.761 43.478 0.00 0.00 38.09 2.40
6276 6828 3.059570 CGACGTGACAGTCTTGCTAAATC 59.940 47.826 0.00 0.00 38.90 2.17
6277 6829 2.987149 CGACGTGACAGTCTTGCTAAAT 59.013 45.455 0.00 0.00 38.90 1.40
6278 6830 2.223641 ACGACGTGACAGTCTTGCTAAA 60.224 45.455 0.00 0.00 38.90 1.85
6280 6832 0.949397 ACGACGTGACAGTCTTGCTA 59.051 50.000 0.00 0.00 38.90 3.49
6281 6833 0.949397 TACGACGTGACAGTCTTGCT 59.051 50.000 11.56 0.00 38.90 3.91
6282 6834 1.912110 GATACGACGTGACAGTCTTGC 59.088 52.381 11.56 0.00 38.90 4.01
6283 6835 2.161808 AGGATACGACGTGACAGTCTTG 59.838 50.000 11.56 0.00 46.39 3.02
6286 6838 1.736126 TCAGGATACGACGTGACAGTC 59.264 52.381 11.56 0.00 46.39 3.51
6287 6839 1.817357 TCAGGATACGACGTGACAGT 58.183 50.000 11.56 0.00 46.39 3.55
6288 6840 3.108881 CAATCAGGATACGACGTGACAG 58.891 50.000 11.56 0.00 46.39 3.51
6290 6842 2.098607 TCCAATCAGGATACGACGTGAC 59.901 50.000 11.56 4.23 43.07 3.67
6291 6843 2.371306 TCCAATCAGGATACGACGTGA 58.629 47.619 11.56 0.00 43.07 4.35
6292 6844 2.863401 TCCAATCAGGATACGACGTG 57.137 50.000 11.56 0.00 43.07 4.49
6302 6854 1.187974 TTGCCTTGCATCCAATCAGG 58.812 50.000 0.00 0.00 38.76 3.86
6303 6855 3.536956 AATTGCCTTGCATCCAATCAG 57.463 42.857 7.25 0.00 38.76 2.90
6304 6856 4.025360 ACTAATTGCCTTGCATCCAATCA 58.975 39.130 7.25 0.00 38.76 2.57
6305 6857 4.614946 GACTAATTGCCTTGCATCCAATC 58.385 43.478 7.25 0.00 38.76 2.67
6306 6858 3.067180 CGACTAATTGCCTTGCATCCAAT 59.933 43.478 0.00 0.00 38.76 3.16
6309 6861 1.268743 GCGACTAATTGCCTTGCATCC 60.269 52.381 0.00 0.00 38.76 3.51
6310 6862 1.672881 AGCGACTAATTGCCTTGCATC 59.327 47.619 0.00 0.00 38.76 3.91
6311 6863 1.402968 CAGCGACTAATTGCCTTGCAT 59.597 47.619 0.00 0.00 38.76 3.96
6313 6865 0.524180 GCAGCGACTAATTGCCTTGC 60.524 55.000 0.00 0.00 35.57 4.01
6314 6866 3.611433 GCAGCGACTAATTGCCTTG 57.389 52.632 0.00 0.00 35.57 3.61
6318 6870 2.023320 GCGGCAGCGACTAATTGC 59.977 61.111 0.00 0.00 37.11 3.56
6332 6884 2.083167 AACTGAAAATTGCCATGCGG 57.917 45.000 0.00 0.00 0.00 5.69
6333 6885 2.158058 CCAAACTGAAAATTGCCATGCG 59.842 45.455 0.00 0.00 0.00 4.73
6337 6890 4.478206 TGTTCCAAACTGAAAATTGCCA 57.522 36.364 0.00 0.00 0.00 4.92
6340 6893 4.815308 TGCCATGTTCCAAACTGAAAATTG 59.185 37.500 0.00 0.00 0.00 2.32
6344 6897 4.478206 TTTGCCATGTTCCAAACTGAAA 57.522 36.364 0.00 0.00 0.00 2.69
6347 6900 4.261578 AGATTTGCCATGTTCCAAACTG 57.738 40.909 5.81 0.00 34.18 3.16
6349 6902 5.405269 GTGTAAGATTTGCCATGTTCCAAAC 59.595 40.000 5.81 0.00 34.18 2.93
6353 6906 4.782019 TGTGTAAGATTTGCCATGTTCC 57.218 40.909 0.00 0.00 0.00 3.62
6361 6914 5.091431 GTCATGCTCTTGTGTAAGATTTGC 58.909 41.667 0.00 0.00 41.83 3.68
6362 6915 5.319139 CGTCATGCTCTTGTGTAAGATTTG 58.681 41.667 0.00 0.00 41.83 2.32
6371 6924 2.624316 AATTGCGTCATGCTCTTGTG 57.376 45.000 0.00 0.00 46.63 3.33
6372 6925 4.970662 ATAAATTGCGTCATGCTCTTGT 57.029 36.364 0.00 0.00 46.63 3.16
6373 6926 6.052840 AGTATAAATTGCGTCATGCTCTTG 57.947 37.500 0.00 0.00 46.63 3.02
6374 6927 7.442364 ACATAGTATAAATTGCGTCATGCTCTT 59.558 33.333 0.00 0.00 46.63 2.85
6376 6929 7.121974 ACATAGTATAAATTGCGTCATGCTC 57.878 36.000 0.00 0.00 46.63 4.26
6377 6930 7.496529 AACATAGTATAAATTGCGTCATGCT 57.503 32.000 0.00 0.00 46.63 3.79
6382 6935 6.083265 CGCGAAAACATAGTATAAATTGCGTC 59.917 38.462 0.00 1.73 35.17 5.19
6384 6937 5.899696 ACGCGAAAACATAGTATAAATTGCG 59.100 36.000 15.93 13.30 44.24 4.85
6385 6938 6.343924 GCACGCGAAAACATAGTATAAATTGC 60.344 38.462 15.93 0.64 0.00 3.56
6386 6939 6.140108 GGCACGCGAAAACATAGTATAAATTG 59.860 38.462 15.93 0.00 0.00 2.32
6387 6940 6.183360 TGGCACGCGAAAACATAGTATAAATT 60.183 34.615 15.93 0.00 0.00 1.82
6389 6942 4.630505 TGGCACGCGAAAACATAGTATAAA 59.369 37.500 15.93 0.00 0.00 1.40
6390 6943 4.182339 TGGCACGCGAAAACATAGTATAA 58.818 39.130 15.93 0.00 0.00 0.98
6392 6945 2.623535 TGGCACGCGAAAACATAGTAT 58.376 42.857 15.93 0.00 0.00 2.12
6395 6948 1.882198 CTTGGCACGCGAAAACATAG 58.118 50.000 15.93 0.00 0.00 2.23
6410 6963 0.321653 AGCTAAACGTCCAGGCTTGG 60.322 55.000 8.96 8.96 46.49 3.61
6414 6967 2.399356 GCCAGCTAAACGTCCAGGC 61.399 63.158 0.00 0.00 0.00 4.85
6416 6969 0.320771 ACTGCCAGCTAAACGTCCAG 60.321 55.000 0.00 0.00 0.00 3.86
6418 6971 0.037232 AGACTGCCAGCTAAACGTCC 60.037 55.000 0.00 0.00 0.00 4.79
6419 6972 1.067495 AGAGACTGCCAGCTAAACGTC 60.067 52.381 0.00 0.00 0.00 4.34
6421 6974 2.941453 TAGAGACTGCCAGCTAAACG 57.059 50.000 0.00 0.00 0.00 3.60
6422 6975 5.941948 TTTTTAGAGACTGCCAGCTAAAC 57.058 39.130 0.00 0.00 33.86 2.01
6423 6976 6.372659 CAGATTTTTAGAGACTGCCAGCTAAA 59.627 38.462 0.00 0.00 32.69 1.85
6424 6977 5.877012 CAGATTTTTAGAGACTGCCAGCTAA 59.123 40.000 0.00 0.00 0.00 3.09
6425 6978 5.423015 CAGATTTTTAGAGACTGCCAGCTA 58.577 41.667 0.00 0.00 0.00 3.32
6427 6980 3.376546 CCAGATTTTTAGAGACTGCCAGC 59.623 47.826 0.00 0.00 0.00 4.85
6428 6981 4.394300 CACCAGATTTTTAGAGACTGCCAG 59.606 45.833 0.00 0.00 0.00 4.85
6430 6983 4.327680 ACACCAGATTTTTAGAGACTGCC 58.672 43.478 0.00 0.00 0.00 4.85
6431 6984 4.997395 TGACACCAGATTTTTAGAGACTGC 59.003 41.667 0.00 0.00 0.00 4.40
6432 6985 6.459066 TCTGACACCAGATTTTTAGAGACTG 58.541 40.000 0.00 0.00 44.01 3.51
6433 6986 6.672266 TCTGACACCAGATTTTTAGAGACT 57.328 37.500 0.00 0.00 44.01 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.