AutoCloner

Multiple sequence alignment - TraesCS2D01G565100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2D01G565100	chr2D	100.000	7921	0	0	1	7921	635227501	635219581	0.000000e+00	14628.0
1	TraesCS2D01G565100	chr2A	93.791	4316	203	33	3255	7543	777524093	777528370	0.000000e+00	6425.0
2	TraesCS2D01G565100	chr2A	82.396	1102	89	54	1	1055	777521046	777522089	0.000000e+00	863.0
3	TraesCS2D01G565100	chr2A	82.851	863	58	41	2342	3130	777523252	777524098	0.000000e+00	691.0
4	TraesCS2D01G565100	chr2A	85.802	486	38	15	1765	2240	777522736	777523200	3.320000e-133	486.0
5	TraesCS2D01G565100	chr2A	95.763	236	9	1	7570	7804	777528656	777528891	5.800000e-101	379.0
6	TraesCS2D01G565100	chr2A	97.101	69	2	0	7853	7921	777528900	777528968	5.020000e-22	117.0
7	TraesCS2D01G565100	chr2A	88.158	76	6	3	1603	1677	777522641	777522714	3.940000e-13	87.9
8	TraesCS2D01G565100	chr2B	89.531	3200	191	69	2713	5816	779317162	779314011	0.000000e+00	3921.0
9	TraesCS2D01G565100	chr2B	96.026	1988	58	9	5826	7804	779313971	779311996	0.000000e+00	3214.0
10	TraesCS2D01G565100	chr2B	81.626	1230	94	76	1	1165	779340009	779338847	0.000000e+00	898.0
11	TraesCS2D01G565100	chr2B	95.833	96	4	0	1077	1172	779320165	779320070	1.060000e-33	156.0
12	TraesCS2D01G565100	chr2B	87.903	124	7	6	1611	1733	779319639	779319523	1.070000e-28	139.0
13	TraesCS2D01G565100	chr2B	90.816	98	9	0	7579	7676	779289362	779289265	1.790000e-26	132.0
14	TraesCS2D01G565100	chr2B	81.098	164	27	2	1735	1898	779318063	779317904	2.320000e-25	128.0
15	TraesCS2D01G565100	chr2B	98.485	66	1	0	7856	7921	779311984	779311919	5.020000e-22	117.0
16	TraesCS2D01G565100	chr2B	100.000	37	0	0	1014	1050	779338261	779338225	1.430000e-07	69.4
17	TraesCS2D01G565100	chr1B	98.413	63	1	0	7796	7858	645248564	645248626	2.340000e-20	111.0
18	TraesCS2D01G565100	chr7A	95.455	66	3	0	7796	7861	425789664	425789599	1.090000e-18	106.0
19	TraesCS2D01G565100	chr7A	96.825	63	2	0	7796	7858	549352235	549352297	1.090000e-18	106.0
20	TraesCS2D01G565100	chr6D	95.455	66	3	0	7796	7861	115044647	115044582	1.090000e-18	106.0
21	TraesCS2D01G565100	chr6D	96.825	63	2	0	7796	7858	423681237	423681299	1.090000e-18	106.0
22	TraesCS2D01G565100	chr5D	96.825	63	2	0	7796	7858	115924631	115924569	1.090000e-18	106.0
23	TraesCS2D01G565100	chr5D	96.825	63	2	0	7796	7858	241844095	241844157	1.090000e-18	106.0
24	TraesCS2D01G565100	chr3D	96.825	63	2	0	7796	7858	6168847	6168785	1.090000e-18	106.0
25	TraesCS2D01G565100	chr1D	96.825	63	2	0	7796	7858	44666239	44666177	1.090000e-18	106.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2D01G565100	chr2D	635219581	635227501	7920	True	14628.000000	14628	100.000000	1	7921	1	chr2D.!!$R1	7920
1	TraesCS2D01G565100	chr2A	777521046	777528968	7922	False	1292.700000	6425	89.408857	1	7921	7	chr2A.!!$F1	7920
2	TraesCS2D01G565100	chr2B	779311919	779320165	8246	True	1279.166667	3921	91.479333	1077	7921	6	chr2B.!!$R2	6844
3	TraesCS2D01G565100	chr2B	779338225	779340009	1784	True	483.700000	898	90.813000	1	1165	2	chr2B.!!$R3	1164

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
20	21	0.107654	GCAAAGCTAGACCGGTGGAT	60.108	55.0	14.63	0.00	0.00	3.41	F
996	1116	0.108472	CATCAGTGCGCTTCTCTGGA	60.108	55.0	9.73	1.79	37.03	3.86	F
1487	1824	0.037232	GGACGTTTAGCTGGCAGTCT	60.037	55.0	17.16	15.47	0.00	3.24	F
2166	4013	0.097325	CGCTAGGTGACAGTCGAGAC	59.903	60.0	0.00	0.00	0.00	3.36	F
2986	5309	0.108019	ACAACTCAAACGGACCCCTC	59.892	55.0	0.00	0.00	0.00	4.30	F
3625	5959	0.040067	CCGTGCAACAAAGAAGAGGC	60.040	55.0	0.00	0.00	35.74	4.70	F
3626	5960	0.947244	CGTGCAACAAAGAAGAGGCT	59.053	50.0	0.00	0.00	35.74	4.58	F
5161	7509	0.667993	ACCACAATCTTGCACCAACG	59.332	50.0	0.00	0.00	0.00	4.10	F
6271	8692	0.883153	TTCACATGACATGCCACAGC	59.117	50.0	15.49	0.00	40.48	4.40	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1269	1535	0.173708	AAATCTCGGTCGACTGAGGC	59.826	55.000	40.33	15.3	46.70	4.70	R
2695	4962	0.110486	TTCTTGGTCCCACTTCCTGC	59.890	55.000	0.00	0.0	0.00	4.85	R
3118	5449	0.100503	GTCGTGCCTGCACAACTTTT	59.899	50.000	21.01	0.0	46.47	2.27	R
3234	5565	0.245539	TGCAGTACGGTGCTAGGAAC	59.754	55.000	8.39	0.0	44.32	3.62	R
4042	6385	0.539438	TGGACCTGCCAACATCCAAC	60.539	55.000	0.00	0.0	45.87	3.77	R
4981	7326	2.138535	TCCAAGATGGCCCAGGATAT	57.861	50.000	0.00	0.0	37.47	1.63	R
5575	7951	4.460382	GGAGCATTTGAATCCAGTTGAGAA	59.540	41.667	0.00	0.0	33.08	2.87	R
6536	8970	1.583495	CGTAGTCGAGGGAGCACACA	61.583	60.000	0.00	0.0	39.71	3.72	R
7572	10270	0.036875	AACACTCCCTTGCAGGCTAC	59.963	55.000	0.00	0.0	32.73	3.58	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
20	21	0.107654	GCAAAGCTAGACCGGTGGAT	60.108	55.000	14.63	0.00	0.00	3.41
48	49	5.261209	TCCATGCATGCACCTTAATTAAC	57.739	39.130	25.37	0.00	0.00	2.01
76	77	5.069648	ACTCCCATCATATATCATGTAGGCG	59.930	44.000	0.00	0.00	0.00	5.52
89	90	0.249741	GTAGGCGGCGTATGATTGGT	60.250	55.000	9.37	0.00	0.00	3.67
97	98	3.211045	GGCGTATGATTGGTTGTATGGT	58.789	45.455	0.00	0.00	0.00	3.55
102	103	4.963276	ATGATTGGTTGTATGGTCAACG	57.037	40.909	0.00	0.00	45.75	4.10
115	116	7.778083	TGTATGGTCAACGTTGTCTATTATCT	58.222	34.615	26.47	7.54	0.00	1.98
116	117	8.905850	TGTATGGTCAACGTTGTCTATTATCTA	58.094	33.333	26.47	7.55	0.00	1.98
117	118	9.909644	GTATGGTCAACGTTGTCTATTATCTAT	57.090	33.333	26.47	13.00	0.00	1.98
119	120	8.002984	TGGTCAACGTTGTCTATTATCTATCA	57.997	34.615	26.47	8.05	0.00	2.15
120	121	7.919091	TGGTCAACGTTGTCTATTATCTATCAC	59.081	37.037	26.47	12.36	0.00	3.06
121	122	7.381678	GGTCAACGTTGTCTATTATCTATCACC	59.618	40.741	26.47	17.07	0.00	4.02
122	123	7.919091	GTCAACGTTGTCTATTATCTATCACCA	59.081	37.037	26.47	0.00	0.00	4.17
123	124	8.471609	TCAACGTTGTCTATTATCTATCACCAA	58.528	33.333	26.47	0.00	0.00	3.67
124	125	8.755941	CAACGTTGTCTATTATCTATCACCAAG	58.244	37.037	20.21	0.00	0.00	3.61
125	126	6.924060	ACGTTGTCTATTATCTATCACCAAGC	59.076	38.462	0.00	0.00	0.00	4.01
126	127	6.366332	CGTTGTCTATTATCTATCACCAAGCC	59.634	42.308	0.00	0.00	0.00	4.35
141	142	3.160269	CCAAGCCTTGGTTCTTCAATCT	58.840	45.455	15.63	0.00	45.93	2.40
149	150	2.108075	TGGTTCTTCAATCTTGCCCTGA	59.892	45.455	0.00	0.00	0.00	3.86
150	151	3.245371	TGGTTCTTCAATCTTGCCCTGAT	60.245	43.478	0.00	0.00	0.00	2.90
387	457	1.079336	GCCGTACCAGGTCCTGTTC	60.079	63.158	17.85	6.63	0.00	3.18
526	596	3.735208	CGCCTACATCGAGTGAATGAAGT	60.735	47.826	0.00	0.00	0.00	3.01
545	615	1.433053	TTACAAATCGATGGCGGCGG	61.433	55.000	9.78	0.00	38.28	6.13
560	630	3.117171	CGGCACTGCTGACTGCTC	61.117	66.667	3.48	0.00	43.37	4.26
561	631	2.745492	GGCACTGCTGACTGCTCC	60.745	66.667	5.87	0.00	43.37	4.70
562	632	2.031616	GCACTGCTGACTGCTCCA	59.968	61.111	5.87	0.00	43.37	3.86
563	633	2.323580	GCACTGCTGACTGCTCCAC	61.324	63.158	5.87	0.00	43.37	4.02
564	634	1.370437	CACTGCTGACTGCTCCACT	59.630	57.895	5.87	0.00	43.37	4.00
565	635	0.669932	CACTGCTGACTGCTCCACTC	60.670	60.000	5.87	0.00	43.37	3.51
566	636	1.079266	CTGCTGACTGCTCCACTCC	60.079	63.158	5.87	0.00	43.37	3.85
567	637	2.125753	GCTGACTGCTCCACTCCG	60.126	66.667	0.00	0.00	38.95	4.63
568	638	2.936912	GCTGACTGCTCCACTCCGT	61.937	63.158	0.00	0.00	38.95	4.69
569	639	1.595993	GCTGACTGCTCCACTCCGTA	61.596	60.000	0.00	0.00	38.95	4.02
570	640	0.171455	CTGACTGCTCCACTCCGTAC	59.829	60.000	0.00	0.00	0.00	3.67
572	642	0.966370	GACTGCTCCACTCCGTACCT	60.966	60.000	0.00	0.00	0.00	3.08
600	680	3.085443	GCGACAGCTATACATCACAGT	57.915	47.619	0.00	0.00	41.01	3.55
608	688	6.127225	ACAGCTATACATCACAGTTCACAGAT	60.127	38.462	0.00	0.00	0.00	2.90
609	689	6.200475	CAGCTATACATCACAGTTCACAGATG	59.800	42.308	0.00	0.00	42.61	2.90
610	690	6.097412	AGCTATACATCACAGTTCACAGATGA	59.903	38.462	8.11	0.00	40.10	2.92
611	691	6.199908	GCTATACATCACAGTTCACAGATGAC	59.800	42.308	8.11	0.00	40.10	3.06
612	692	4.341366	ACATCACAGTTCACAGATGACA	57.659	40.909	8.11	0.00	40.10	3.58
613	693	4.060900	ACATCACAGTTCACAGATGACAC	58.939	43.478	8.11	0.00	40.10	3.67
614	694	3.817709	TCACAGTTCACAGATGACACA	57.182	42.857	0.00	0.00	33.38	3.72
615	695	3.457234	TCACAGTTCACAGATGACACAC	58.543	45.455	0.00	0.00	33.38	3.82
616	696	3.118811	TCACAGTTCACAGATGACACACA	60.119	43.478	0.00	0.00	33.38	3.72
617	697	3.622612	CACAGTTCACAGATGACACACAA	59.377	43.478	0.00	0.00	33.38	3.33
618	698	3.873361	ACAGTTCACAGATGACACACAAG	59.127	43.478	0.00	0.00	33.38	3.16
622	702	2.874086	TCACAGATGACACACAAGCAAG	59.126	45.455	0.00	0.00	0.00	4.01
638	718	1.606737	GCAAGAGAGTTCTCCTGCGTT	60.607	52.381	14.86	0.00	46.49	4.84
651	731	4.750098	TCTCCTGCGTTTTGTAGAGAAAAG	59.250	41.667	0.00	0.00	30.84	2.27
652	732	4.448210	TCCTGCGTTTTGTAGAGAAAAGT	58.552	39.130	0.00	0.00	30.84	2.66
654	734	6.050432	TCCTGCGTTTTGTAGAGAAAAGTAA	58.950	36.000	0.00	0.00	30.84	2.24
655	735	6.539464	TCCTGCGTTTTGTAGAGAAAAGTAAA	59.461	34.615	0.00	0.00	30.84	2.01
679	777	3.245284	CACACAACAGAGTTGGAACTACG	59.755	47.826	13.71	0.00	39.88	3.51
718	823	5.049680	GGAAATTACGCAACAGAGTTTCTCA	60.050	40.000	0.00	0.00	32.06	3.27
719	824	6.371809	AAATTACGCAACAGAGTTTCTCAA	57.628	33.333	0.00	0.00	32.06	3.02
720	825	6.560253	AATTACGCAACAGAGTTTCTCAAT	57.440	33.333	0.00	0.00	32.06	2.57
721	826	3.885484	ACGCAACAGAGTTTCTCAATG	57.115	42.857	0.00	0.00	32.06	2.82
723	828	2.578495	GCAACAGAGTTTCTCAATGCG	58.422	47.619	0.00	0.00	32.06	4.73
724	829	2.224079	GCAACAGAGTTTCTCAATGCGA	59.776	45.455	0.00	0.00	32.06	5.10
725	830	3.303990	GCAACAGAGTTTCTCAATGCGAA	60.304	43.478	0.00	0.00	32.06	4.70
726	831	4.789481	GCAACAGAGTTTCTCAATGCGAAA	60.789	41.667	0.00	0.00	32.06	3.46
727	832	4.474226	ACAGAGTTTCTCAATGCGAAAC	57.526	40.909	18.03	18.03	46.50	2.78
740	860	5.912396	TCAATGCGAAACTGTTGTTTACATC	59.088	36.000	0.00	0.00	45.36	3.06
759	879	3.667497	TCAGAAGATATCCATCCACGC	57.333	47.619	0.00	0.00	0.00	5.34
782	902	2.440247	GGGTGGAATTGAGCCGGG	60.440	66.667	2.18	0.00	0.00	5.73
798	918	2.273449	GGCCTGGTGACATGGGAG	59.727	66.667	0.00	0.00	41.51	4.30
805	925	0.543749	GGTGACATGGGAGGAAGAGG	59.456	60.000	0.00	0.00	0.00	3.69
806	926	0.543749	GTGACATGGGAGGAAGAGGG	59.456	60.000	0.00	0.00	0.00	4.30
807	927	0.119155	TGACATGGGAGGAAGAGGGT	59.881	55.000	0.00	0.00	0.00	4.34
868	988	4.279169	CAGGGATTAATGTAATGGGCACTG	59.721	45.833	0.00	0.00	0.00	3.66
966	1086	0.322098	TTGGTGGGTAGGTTCATGCG	60.322	55.000	0.00	0.00	0.00	4.73
993	1113	4.198625	GCATCAGTGCGCTTCTCT	57.801	55.556	9.73	0.00	42.28	3.10
994	1114	1.714414	GCATCAGTGCGCTTCTCTG	59.286	57.895	9.73	12.02	42.28	3.35
995	1115	1.703438	GCATCAGTGCGCTTCTCTGG	61.703	60.000	9.73	2.32	42.28	3.86
996	1116	0.108472	CATCAGTGCGCTTCTCTGGA	60.108	55.000	9.73	1.79	37.03	3.86
1064	1184	4.157289	TCTTTCATCGGTTTCGCTACTACT	59.843	41.667	0.00	0.00	36.13	2.57
1065	1185	3.687572	TCATCGGTTTCGCTACTACTC	57.312	47.619	0.00	0.00	36.13	2.59
1066	1186	3.011818	TCATCGGTTTCGCTACTACTCA	58.988	45.455	0.00	0.00	36.13	3.41
1068	1188	1.470098	TCGGTTTCGCTACTACTCACC	59.530	52.381	0.00	0.00	36.13	4.02
1069	1189	1.200716	CGGTTTCGCTACTACTCACCA	59.799	52.381	0.00	0.00	0.00	4.17
1070	1190	2.731341	CGGTTTCGCTACTACTCACCAG	60.731	54.545	0.00	0.00	0.00	4.00
1071	1191	2.230750	GGTTTCGCTACTACTCACCAGT	59.769	50.000	0.00	0.00	36.55	4.00
1072	1192	3.243336	GTTTCGCTACTACTCACCAGTG	58.757	50.000	0.00	0.00	33.62	3.66
1073	1193	0.809385	TCGCTACTACTCACCAGTGC	59.191	55.000	0.00	0.00	33.62	4.40
1074	1194	0.811915	CGCTACTACTCACCAGTGCT	59.188	55.000	0.00	0.00	33.62	4.40
1075	1195	1.468224	CGCTACTACTCACCAGTGCTG	60.468	57.143	0.00	0.00	33.62	4.41
1096	1216	1.949525	CCAGGGGCTATGTTTCATTCG	59.050	52.381	0.00	0.00	0.00	3.34
1172	1307	2.388232	CGGTCAACGCCTAACCAGC	61.388	63.158	0.00	0.00	34.82	4.85
1205	1382	5.528690	GGCTGTCTGCTGATGATAACATTAA	59.471	40.000	0.00	0.00	42.39	1.40
1207	1384	6.909357	GCTGTCTGCTGATGATAACATTAAAC	59.091	38.462	0.00	0.00	36.38	2.01
1208	1385	7.201679	GCTGTCTGCTGATGATAACATTAAACT	60.202	37.037	0.00	0.00	36.38	2.66
1211	1388	6.479990	TCTGCTGATGATAACATTAAACTCCG	59.520	38.462	0.00	0.00	36.82	4.63
1215	1401	7.640240	GCTGATGATAACATTAAACTCCGTTTC	59.360	37.037	0.00	0.00	35.69	2.78
1223	1489	8.861033	AACATTAAACTCCGTTTCTTTAAACC	57.139	30.769	0.00	0.00	41.68	3.27
1241	1507	5.689383	AAACCACAATATACATCCGATGC	57.311	39.130	8.36	0.00	0.00	3.91
1254	1520	3.281727	TCCGATGCCAGATTTTTAGCT	57.718	42.857	0.00	0.00	0.00	3.32
1257	1523	4.107622	CCGATGCCAGATTTTTAGCTTTG	58.892	43.478	0.00	0.00	0.00	2.77
1258	1524	4.107622	CGATGCCAGATTTTTAGCTTTGG	58.892	43.478	0.00	0.00	0.00	3.28
1259	1525	3.959535	TGCCAGATTTTTAGCTTTGGG	57.040	42.857	0.00	0.00	0.00	4.12
1260	1526	2.566724	TGCCAGATTTTTAGCTTTGGGG	59.433	45.455	0.00	0.00	0.00	4.96
1261	1527	2.567169	GCCAGATTTTTAGCTTTGGGGT	59.433	45.455	0.00	0.00	0.00	4.95
1263	1529	4.568956	CCAGATTTTTAGCTTTGGGGTTG	58.431	43.478	0.00	0.00	0.00	3.77
1264	1530	4.563374	CCAGATTTTTAGCTTTGGGGTTGG	60.563	45.833	0.00	0.00	0.00	3.77
1265	1531	2.920724	TTTTTAGCTTTGGGGTTGGC	57.079	45.000	0.00	0.00	0.00	4.52
1266	1532	2.095604	TTTTAGCTTTGGGGTTGGCT	57.904	45.000	0.00	0.00	38.62	4.75
1267	1533	2.982339	TTTAGCTTTGGGGTTGGCTA	57.018	45.000	0.00	0.00	36.40	3.93
1269	1535	0.623723	TAGCTTTGGGGTTGGCTAGG	59.376	55.000	0.00	0.00	36.40	3.02
1280	1546	2.809010	GGCTAGGCCTCAGTCGAC	59.191	66.667	9.68	7.70	46.69	4.20
1281	1547	2.787567	GGCTAGGCCTCAGTCGACC	61.788	68.421	9.68	0.00	46.69	4.79
1282	1548	3.111939	CTAGGCCTCAGTCGACCG	58.888	66.667	9.68	1.05	0.00	4.79
1285	1551	1.907222	TAGGCCTCAGTCGACCGAGA	61.907	60.000	26.72	15.01	0.00	4.04
1286	1552	2.122167	GGCCTCAGTCGACCGAGAT	61.122	63.158	26.72	0.00	0.00	2.75
1287	1553	1.668101	GGCCTCAGTCGACCGAGATT	61.668	60.000	26.72	0.00	0.00	2.40
1288	1554	0.173708	GCCTCAGTCGACCGAGATTT	59.826	55.000	26.72	0.00	0.00	2.17
1289	1555	1.404391	GCCTCAGTCGACCGAGATTTA	59.596	52.381	26.72	0.00	0.00	1.40
1290	1556	2.159282	GCCTCAGTCGACCGAGATTTAA	60.159	50.000	26.72	0.00	0.00	1.52
1291	1557	3.491104	GCCTCAGTCGACCGAGATTTAAT	60.491	47.826	26.72	0.00	0.00	1.40
1292	1558	4.291783	CCTCAGTCGACCGAGATTTAATC	58.708	47.826	26.72	0.00	0.00	1.75
1293	1559	4.202020	CCTCAGTCGACCGAGATTTAATCA	60.202	45.833	26.72	0.00	0.00	2.57
1294	1560	4.669318	TCAGTCGACCGAGATTTAATCAC	58.331	43.478	13.01	0.00	0.00	3.06
1295	1561	4.157105	TCAGTCGACCGAGATTTAATCACA	59.843	41.667	13.01	0.00	0.00	3.58
1296	1562	4.500837	CAGTCGACCGAGATTTAATCACAG	59.499	45.833	13.01	0.00	0.00	3.66
1297	1563	4.398358	AGTCGACCGAGATTTAATCACAGA	59.602	41.667	13.01	0.00	0.00	3.41
1298	1564	5.067936	AGTCGACCGAGATTTAATCACAGAT	59.932	40.000	13.01	0.00	0.00	2.90
1299	1565	6.262496	AGTCGACCGAGATTTAATCACAGATA	59.738	38.462	13.01	0.00	0.00	1.98
1300	1566	7.040340	AGTCGACCGAGATTTAATCACAGATAT	60.040	37.037	13.01	0.00	0.00	1.63
1301	1567	8.235226	GTCGACCGAGATTTAATCACAGATATA	58.765	37.037	3.51	0.00	0.00	0.86
1302	1568	8.235226	TCGACCGAGATTTAATCACAGATATAC	58.765	37.037	7.74	0.00	0.00	1.47
1303	1569	7.485277	CGACCGAGATTTAATCACAGATATACC	59.515	40.741	7.74	0.00	0.00	2.73
1304	1570	8.190326	ACCGAGATTTAATCACAGATATACCA	57.810	34.615	7.74	0.00	0.00	3.25
1305	1571	8.816894	ACCGAGATTTAATCACAGATATACCAT	58.183	33.333	7.74	0.00	0.00	3.55
1306	1572	9.091784	CCGAGATTTAATCACAGATATACCATG	57.908	37.037	7.74	0.00	0.00	3.66
1307	1573	9.091784	CGAGATTTAATCACAGATATACCATGG	57.908	37.037	11.19	11.19	0.00	3.66
1308	1574	9.388506	GAGATTTAATCACAGATATACCATGGG	57.611	37.037	18.09	0.00	0.00	4.00
1309	1575	8.894592	AGATTTAATCACAGATATACCATGGGT	58.105	33.333	18.09	6.93	40.16	4.51
1310	1576	9.520515	GATTTAATCACAGATATACCATGGGTT	57.479	33.333	18.09	5.23	37.09	4.11
1314	1580	7.872061	ATCACAGATATACCATGGGTTAAGA	57.128	36.000	18.09	2.49	37.09	2.10
1315	1581	7.062749	TCACAGATATACCATGGGTTAAGAC	57.937	40.000	18.09	1.25	37.09	3.01
1316	1582	6.844388	TCACAGATATACCATGGGTTAAGACT	59.156	38.462	18.09	3.64	37.09	3.24
1317	1583	7.347222	TCACAGATATACCATGGGTTAAGACTT	59.653	37.037	18.09	0.00	37.09	3.01
1318	1584	7.442364	CACAGATATACCATGGGTTAAGACTTG	59.558	40.741	18.09	5.82	37.09	3.16
1319	1585	7.347222	ACAGATATACCATGGGTTAAGACTTGA	59.653	37.037	18.09	0.00	37.09	3.02
1320	1586	7.875041	CAGATATACCATGGGTTAAGACTTGAG	59.125	40.741	18.09	0.00	37.09	3.02
1321	1587	7.789831	AGATATACCATGGGTTAAGACTTGAGA	59.210	37.037	18.09	0.00	37.09	3.27
1322	1588	6.831664	ATACCATGGGTTAAGACTTGAGAT	57.168	37.500	18.09	0.00	37.09	2.75
1323	1589	5.104259	ACCATGGGTTAAGACTTGAGATC	57.896	43.478	18.09	0.00	27.29	2.75
1324	1590	4.080299	ACCATGGGTTAAGACTTGAGATCC	60.080	45.833	18.09	0.00	27.29	3.36
1325	1591	4.080356	CCATGGGTTAAGACTTGAGATCCA	60.080	45.833	2.85	0.48	0.00	3.41
1326	1592	4.826274	TGGGTTAAGACTTGAGATCCAG	57.174	45.455	0.00	0.00	0.00	3.86
1327	1593	4.425772	TGGGTTAAGACTTGAGATCCAGA	58.574	43.478	0.00	0.00	0.00	3.86
1328	1594	5.032846	TGGGTTAAGACTTGAGATCCAGAT	58.967	41.667	0.00	0.00	0.00	2.90
1329	1595	5.488919	TGGGTTAAGACTTGAGATCCAGATT	59.511	40.000	0.00	0.00	0.00	2.40
1330	1596	6.012508	TGGGTTAAGACTTGAGATCCAGATTT	60.013	38.462	0.00	0.00	0.00	2.17
1331	1597	7.182026	TGGGTTAAGACTTGAGATCCAGATTTA	59.818	37.037	0.00	0.00	0.00	1.40
1332	1598	7.713073	GGGTTAAGACTTGAGATCCAGATTTAG	59.287	40.741	0.00	0.00	0.00	1.85
1333	1599	7.225734	GGTTAAGACTTGAGATCCAGATTTAGC	59.774	40.741	0.00	0.00	0.00	3.09
1334	1600	5.946942	AGACTTGAGATCCAGATTTAGCA	57.053	39.130	0.00	0.00	0.00	3.49
1335	1601	6.305272	AGACTTGAGATCCAGATTTAGCAA	57.695	37.500	0.00	0.00	0.00	3.91
1336	1602	6.347696	AGACTTGAGATCCAGATTTAGCAAG	58.652	40.000	0.00	0.00	37.92	4.01
1337	1603	6.155910	AGACTTGAGATCCAGATTTAGCAAGA	59.844	38.462	0.00	0.00	36.08	3.02
1338	1604	6.112058	ACTTGAGATCCAGATTTAGCAAGAC	58.888	40.000	0.00	0.00	36.08	3.01
1339	1605	5.946942	TGAGATCCAGATTTAGCAAGACT	57.053	39.130	0.00	0.00	0.00	3.24
1340	1606	5.668471	TGAGATCCAGATTTAGCAAGACTG	58.332	41.667	0.00	0.00	0.00	3.51
1341	1607	5.188555	TGAGATCCAGATTTAGCAAGACTGT	59.811	40.000	0.00	0.00	0.00	3.55
1342	1608	5.669477	AGATCCAGATTTAGCAAGACTGTC	58.331	41.667	0.00	0.00	0.00	3.51
1343	1609	4.890158	TCCAGATTTAGCAAGACTGTCA	57.110	40.909	10.88	0.00	0.00	3.58
1344	1610	4.569943	TCCAGATTTAGCAAGACTGTCAC	58.430	43.478	10.88	0.00	0.00	3.67
1345	1611	3.369147	CCAGATTTAGCAAGACTGTCACG	59.631	47.826	10.88	1.33	0.00	4.35
1346	1612	3.990469	CAGATTTAGCAAGACTGTCACGT	59.010	43.478	10.88	0.00	0.00	4.49
1347	1613	4.090642	CAGATTTAGCAAGACTGTCACGTC	59.909	45.833	10.88	0.00	0.00	4.34
1348	1614	2.046283	TTAGCAAGACTGTCACGTCG	57.954	50.000	10.88	0.00	38.90	5.12
1349	1615	0.949397	TAGCAAGACTGTCACGTCGT	59.051	50.000	10.88	0.00	38.90	4.34
1358	1624	2.753452	ACTGTCACGTCGTATCCTGATT	59.247	45.455	0.00	0.00	0.00	2.57
1403	1740	2.158058	CCGCATGGCAATTTTCAGTTTG	59.842	45.455	0.00	0.00	0.00	2.93
1411	1748	4.213906	GGCAATTTTCAGTTTGGAACATGG	59.786	41.667	0.00	0.00	39.30	3.66
1412	1749	4.319694	GCAATTTTCAGTTTGGAACATGGC	60.320	41.667	0.00	0.00	39.30	4.40
1421	1758	5.634859	CAGTTTGGAACATGGCAAATCTTAC	59.365	40.000	0.00	0.00	39.30	2.34
1422	1759	5.304101	AGTTTGGAACATGGCAAATCTTACA	59.696	36.000	0.00	0.00	39.30	2.41
1426	1763	5.163513	GGAACATGGCAAATCTTACACAAG	58.836	41.667	0.00	0.00	0.00	3.16
1427	1764	5.048083	GGAACATGGCAAATCTTACACAAGA	60.048	40.000	0.00	0.00	44.77	3.02
1432	1769	4.082625	TGGCAAATCTTACACAAGAGCATG	60.083	41.667	0.00	0.00	43.92	4.06
1434	1771	5.091431	GCAAATCTTACACAAGAGCATGAC	58.909	41.667	0.00	0.00	43.92	3.06
1435	1772	5.319139	CAAATCTTACACAAGAGCATGACG	58.681	41.667	0.00	0.00	43.92	4.35
1436	1773	2.337583	TCTTACACAAGAGCATGACGC	58.662	47.619	0.00	0.00	35.82	5.19
1437	1774	2.068519	CTTACACAAGAGCATGACGCA	58.931	47.619	0.00	0.00	46.13	5.24
1439	1776	1.527034	ACACAAGAGCATGACGCAAT	58.473	45.000	0.00	0.00	46.13	3.56
1440	1777	1.881973	ACACAAGAGCATGACGCAATT	59.118	42.857	0.00	0.00	46.13	2.32
1445	1782	5.678483	CACAAGAGCATGACGCAATTTATAC	59.322	40.000	0.00	0.00	46.13	1.47
1460	1797	6.343924	GCAATTTATACTATGTTTTCGCGTGC	60.344	38.462	5.77	0.00	0.00	5.34
1464	1801	1.196808	ACTATGTTTTCGCGTGCCAAG	59.803	47.619	5.77	0.00	0.00	3.61
1473	1810	4.988598	CGTGCCAAGCCTGGACGT	62.989	66.667	5.23	0.00	46.92	4.34
1476	1813	0.887387	GTGCCAAGCCTGGACGTTTA	60.887	55.000	5.23	0.00	46.92	2.01
1484	1821	1.021390	CCTGGACGTTTAGCTGGCAG	61.021	60.000	10.94	10.94	0.00	4.85
1485	1822	0.320771	CTGGACGTTTAGCTGGCAGT	60.321	55.000	17.16	5.61	0.00	4.40
1486	1823	0.320421	TGGACGTTTAGCTGGCAGTC	60.320	55.000	17.16	8.57	0.00	3.51
1487	1824	0.037232	GGACGTTTAGCTGGCAGTCT	60.037	55.000	17.16	15.47	0.00	3.24
1488	1825	1.351153	GACGTTTAGCTGGCAGTCTC	58.649	55.000	17.16	0.00	0.00	3.36
1489	1826	0.969894	ACGTTTAGCTGGCAGTCTCT	59.030	50.000	17.16	7.36	0.00	3.10
1491	1828	2.561419	ACGTTTAGCTGGCAGTCTCTAA	59.439	45.455	17.16	12.08	0.00	2.10
1493	1830	3.994392	CGTTTAGCTGGCAGTCTCTAAAA	59.006	43.478	20.26	11.71	34.16	1.52
1496	1833	6.547283	GTTTAGCTGGCAGTCTCTAAAAATC	58.453	40.000	20.26	10.04	34.16	2.17
1497	1834	4.566426	AGCTGGCAGTCTCTAAAAATCT	57.434	40.909	17.16	0.00	0.00	2.40
1498	1835	4.260170	AGCTGGCAGTCTCTAAAAATCTG	58.740	43.478	17.16	0.00	0.00	2.90
1499	1836	3.376546	GCTGGCAGTCTCTAAAAATCTGG	59.623	47.826	17.16	0.00	0.00	3.86
1500	1837	4.583871	CTGGCAGTCTCTAAAAATCTGGT	58.416	43.478	6.28	0.00	0.00	4.00
1501	1838	4.326826	TGGCAGTCTCTAAAAATCTGGTG	58.673	43.478	0.00	0.00	0.00	4.17
1502	1839	4.202461	TGGCAGTCTCTAAAAATCTGGTGT	60.202	41.667	0.00	0.00	0.00	4.16
1503	1840	4.393371	GGCAGTCTCTAAAAATCTGGTGTC	59.607	45.833	0.00	0.00	0.00	3.67
1504	1841	4.997395	GCAGTCTCTAAAAATCTGGTGTCA	59.003	41.667	0.00	0.00	0.00	3.58
1505	1842	5.121454	GCAGTCTCTAAAAATCTGGTGTCAG	59.879	44.000	0.00	0.00	42.21	3.51
1521	1858	9.444600	TCTGGTGTCAGATTTTTAATACTAACC	57.555	33.333	0.00	0.00	44.39	2.85
1523	1860	9.747898	TGGTGTCAGATTTTTAATACTAACCAT	57.252	29.630	0.00	0.00	0.00	3.55
1541	1878	9.470399	ACTAACCATTTTTATAGGATTTTCCGT	57.530	29.630	0.00	0.00	42.75	4.69
1579	1917	3.450817	TGATTTGATAGGCGTGAGAAGGA	59.549	43.478	0.00	0.00	0.00	3.36
1594	1932	4.072088	GGAAGTTGACCGTGCGCG	62.072	66.667	13.88	13.88	37.95	6.86
1595	1933	3.335534	GAAGTTGACCGTGCGCGT	61.336	61.111	19.61	6.69	36.15	6.01
1596	1934	2.877974	GAAGTTGACCGTGCGCGTT	61.878	57.895	19.61	3.39	36.15	4.84
1597	1935	2.369477	GAAGTTGACCGTGCGCGTTT	62.369	55.000	19.61	4.64	36.15	3.60
1598	1936	1.152989	AAGTTGACCGTGCGCGTTTA	61.153	50.000	19.61	0.00	36.15	2.01
1599	1937	0.947180	AGTTGACCGTGCGCGTTTAT	60.947	50.000	19.61	0.38	36.15	1.40
1600	1938	0.110554	GTTGACCGTGCGCGTTTATT	60.111	50.000	19.61	0.00	36.15	1.40
1601	1939	0.587285	TTGACCGTGCGCGTTTATTT	59.413	45.000	19.61	0.00	36.15	1.40
1602	1940	1.426423	TGACCGTGCGCGTTTATTTA	58.574	45.000	19.61	0.00	36.15	1.40
1658	2028	4.040636	TACGCGCGCACACCTACA	62.041	61.111	32.58	2.74	0.00	2.74
1661	2031	4.072088	GCGCGCACACCTACACAC	62.072	66.667	29.10	0.00	0.00	3.82
1733	2104	2.485795	GCCTCGTCCTCGCTCTGAT	61.486	63.158	0.00	0.00	36.96	2.90
1739	3568	2.484651	TCGTCCTCGCTCTGATATAAGC	59.515	50.000	0.00	0.00	36.96	3.09
1754	3583	0.330267	TAAGCGGGGGAGAAAAAGGG	59.670	55.000	0.00	0.00	0.00	3.95
1755	3584	1.726192	AAGCGGGGGAGAAAAAGGGT	61.726	55.000	0.00	0.00	0.00	4.34
1756	3585	1.228769	GCGGGGGAGAAAAAGGGTT	60.229	57.895	0.00	0.00	0.00	4.11
1757	3586	0.830444	GCGGGGGAGAAAAAGGGTTT	60.830	55.000	0.00	0.00	0.00	3.27
1758	3587	1.548355	GCGGGGGAGAAAAAGGGTTTA	60.548	52.381	0.00	0.00	0.00	2.01
1759	3588	2.886809	GCGGGGGAGAAAAAGGGTTTAT	60.887	50.000	0.00	0.00	0.00	1.40
1760	3589	3.625463	GCGGGGGAGAAAAAGGGTTTATA	60.625	47.826	0.00	0.00	0.00	0.98
1899	3728	0.926155	CGTCAGCGTCTACGTAGCTA	59.074	55.000	18.00	0.00	39.48	3.32
1900	3729	1.331854	CGTCAGCGTCTACGTAGCTAC	60.332	57.143	18.00	14.19	39.48	3.58
1919	3754	2.182791	CGAGCGAGTCATGTGCCT	59.817	61.111	0.00	0.00	0.00	4.75
1920	3755	2.163390	CGAGCGAGTCATGTGCCTG	61.163	63.158	0.00	0.00	0.00	4.85
1921	3756	2.435586	AGCGAGTCATGTGCCTGC	60.436	61.111	0.00	0.00	0.00	4.85
1923	3758	2.046988	CGAGTCATGTGCCTGCCA	60.047	61.111	0.00	0.00	0.00	4.92
1924	3759	2.104859	CGAGTCATGTGCCTGCCAG	61.105	63.158	0.00	0.00	0.00	4.85
1925	3760	2.360852	AGTCATGTGCCTGCCAGC	60.361	61.111	0.00	0.00	0.00	4.85
1926	3761	3.446570	GTCATGTGCCTGCCAGCC	61.447	66.667	0.00	0.00	0.00	4.85
1927	3762	3.654143	TCATGTGCCTGCCAGCCT	61.654	61.111	0.00	0.00	0.00	4.58
1928	3763	3.138798	CATGTGCCTGCCAGCCTC	61.139	66.667	0.00	0.00	0.00	4.70
1929	3764	4.437587	ATGTGCCTGCCAGCCTCC	62.438	66.667	0.00	0.00	0.00	4.30
1992	3831	3.972227	GCAGAAGCAGCGAGGAAA	58.028	55.556	0.00	0.00	41.58	3.13
2016	3855	4.760220	AGCCCCACCCCCGAATCT	62.760	66.667	0.00	0.00	0.00	2.40
2017	3856	3.739613	GCCCCACCCCCGAATCTT	61.740	66.667	0.00	0.00	0.00	2.40
2018	3857	2.595655	CCCCACCCCCGAATCTTC	59.404	66.667	0.00	0.00	0.00	2.87
2020	3859	1.571773	CCCCACCCCCGAATCTTCTT	61.572	60.000	0.00	0.00	0.00	2.52
2021	3860	0.107165	CCCACCCCCGAATCTTCTTC	60.107	60.000	0.00	0.00	0.00	2.87
2022	3861	0.107165	CCACCCCCGAATCTTCTTCC	60.107	60.000	0.00	0.00	0.00	3.46
2087	3931	5.009911	CGGCTAATGATTCATTCCATTCCAA	59.990	40.000	14.99	0.00	35.54	3.53
2088	3932	6.294899	CGGCTAATGATTCATTCCATTCCAAT	60.295	38.462	14.99	0.00	35.54	3.16
2092	3936	7.626999	AATGATTCATTCCATTCCAATCCAT	57.373	32.000	6.06	0.00	26.27	3.41
2095	3939	2.624364	TCATTCCATTCCAATCCATGCG	59.376	45.455	0.00	0.00	0.00	4.73
2097	3941	2.662535	TCCATTCCAATCCATGCGAT	57.337	45.000	0.00	0.00	0.00	4.58
2098	3942	2.232399	TCCATTCCAATCCATGCGATG	58.768	47.619	0.00	0.00	0.00	3.84
2099	3943	1.336517	CCATTCCAATCCATGCGATGC	60.337	52.381	0.00	0.00	0.00	3.91
2100	3944	0.594602	ATTCCAATCCATGCGATGCG	59.405	50.000	0.00	0.00	0.00	4.73
2101	3945	0.463474	TTCCAATCCATGCGATGCGA	60.463	50.000	0.00	0.00	0.00	5.10
2161	4008	1.132643	CCACTACGCTAGGTGACAGTC	59.867	57.143	0.00	0.00	35.69	3.51
2166	4013	0.097325	CGCTAGGTGACAGTCGAGAC	59.903	60.000	0.00	0.00	0.00	3.36
2235	4091	8.147704	TCTTCTTCTTCTTCTTCTTCTTCTTCC	58.852	37.037	0.00	0.00	0.00	3.46
2236	4092	7.610580	TCTTCTTCTTCTTCTTCTTCTTCCT	57.389	36.000	0.00	0.00	0.00	3.36
2237	4093	7.441017	TCTTCTTCTTCTTCTTCTTCTTCCTG	58.559	38.462	0.00	0.00	0.00	3.86
2238	4094	6.739331	TCTTCTTCTTCTTCTTCTTCCTGT	57.261	37.500	0.00	0.00	0.00	4.00
2239	4095	6.520272	TCTTCTTCTTCTTCTTCTTCCTGTG	58.480	40.000	0.00	0.00	0.00	3.66
2240	4096	5.220710	TCTTCTTCTTCTTCTTCCTGTGG	57.779	43.478	0.00	0.00	0.00	4.17
2241	4097	3.409026	TCTTCTTCTTCTTCCTGTGGC	57.591	47.619	0.00	0.00	0.00	5.01
2242	4098	2.705658	TCTTCTTCTTCTTCCTGTGGCA	59.294	45.455	0.00	0.00	0.00	4.92
2243	4099	2.847327	TCTTCTTCTTCCTGTGGCAG	57.153	50.000	0.00	0.00	0.00	4.85
2244	4100	1.163554	CTTCTTCTTCCTGTGGCAGC	58.836	55.000	0.00	0.00	0.00	5.25
2245	4101	0.473755	TTCTTCTTCCTGTGGCAGCA	59.526	50.000	0.00	0.00	0.00	4.41
2246	4102	0.694771	TCTTCTTCCTGTGGCAGCAT	59.305	50.000	0.00	0.00	0.00	3.79
2247	4103	1.074405	TCTTCTTCCTGTGGCAGCATT	59.926	47.619	0.00	0.00	0.00	3.56
2248	4104	1.891150	CTTCTTCCTGTGGCAGCATTT	59.109	47.619	0.00	0.00	0.00	2.32
2249	4105	1.999648	TCTTCCTGTGGCAGCATTTT	58.000	45.000	0.00	0.00	0.00	1.82
2250	4106	1.614903	TCTTCCTGTGGCAGCATTTTG	59.385	47.619	0.00	0.00	0.00	2.44
2251	4107	1.342174	CTTCCTGTGGCAGCATTTTGT	59.658	47.619	0.00	0.00	0.00	2.83
2252	4108	1.412079	TCCTGTGGCAGCATTTTGTT	58.588	45.000	0.00	0.00	0.00	2.83
2253	4109	1.068895	TCCTGTGGCAGCATTTTGTTG	59.931	47.619	0.00	0.00	0.00	3.33
2254	4110	1.202557	CCTGTGGCAGCATTTTGTTGT	60.203	47.619	0.00	0.00	30.85	3.32
2255	4111	2.553086	CTGTGGCAGCATTTTGTTGTT	58.447	42.857	0.00	0.00	30.85	2.83
2256	4112	2.937799	CTGTGGCAGCATTTTGTTGTTT	59.062	40.909	0.00	0.00	30.85	2.83
2257	4113	2.935201	TGTGGCAGCATTTTGTTGTTTC	59.065	40.909	0.00	0.00	30.85	2.78
2258	4114	3.197265	GTGGCAGCATTTTGTTGTTTCT	58.803	40.909	0.00	0.00	30.85	2.52
2259	4115	3.245990	GTGGCAGCATTTTGTTGTTTCTC	59.754	43.478	0.00	0.00	30.85	2.87
2260	4116	2.802247	GGCAGCATTTTGTTGTTTCTCC	59.198	45.455	0.00	0.00	30.85	3.71
2261	4117	2.802247	GCAGCATTTTGTTGTTTCTCCC	59.198	45.455	0.00	0.00	30.85	4.30
2262	4118	3.392882	CAGCATTTTGTTGTTTCTCCCC	58.607	45.455	0.00	0.00	0.00	4.81
2263	4119	3.070015	CAGCATTTTGTTGTTTCTCCCCT	59.930	43.478	0.00	0.00	0.00	4.79
2264	4120	3.321968	AGCATTTTGTTGTTTCTCCCCTC	59.678	43.478	0.00	0.00	0.00	4.30
2265	4121	3.321968	GCATTTTGTTGTTTCTCCCCTCT	59.678	43.478	0.00	0.00	0.00	3.69
2266	4122	4.559502	GCATTTTGTTGTTTCTCCCCTCTC	60.560	45.833	0.00	0.00	0.00	3.20
2267	4123	4.519906	TTTTGTTGTTTCTCCCCTCTCT	57.480	40.909	0.00	0.00	0.00	3.10
2268	4124	4.519906	TTTGTTGTTTCTCCCCTCTCTT	57.480	40.909	0.00	0.00	0.00	2.85
2269	4125	3.771577	TGTTGTTTCTCCCCTCTCTTC	57.228	47.619	0.00	0.00	0.00	2.87
2270	4126	3.318313	TGTTGTTTCTCCCCTCTCTTCT	58.682	45.455	0.00	0.00	0.00	2.85
2271	4127	3.071602	TGTTGTTTCTCCCCTCTCTTCTG	59.928	47.826	0.00	0.00	0.00	3.02
2272	4128	1.625818	TGTTTCTCCCCTCTCTTCTGC	59.374	52.381	0.00	0.00	0.00	4.26
2273	4129	1.905894	GTTTCTCCCCTCTCTTCTGCT	59.094	52.381	0.00	0.00	0.00	4.24
2274	4130	2.304470	GTTTCTCCCCTCTCTTCTGCTT	59.696	50.000	0.00	0.00	0.00	3.91
2275	4131	1.859302	TCTCCCCTCTCTTCTGCTTC	58.141	55.000	0.00	0.00	0.00	3.86
2276	4132	0.829990	CTCCCCTCTCTTCTGCTTCC	59.170	60.000	0.00	0.00	0.00	3.46
2277	4133	0.415429	TCCCCTCTCTTCTGCTTCCT	59.585	55.000	0.00	0.00	0.00	3.36
2278	4134	0.829990	CCCCTCTCTTCTGCTTCCTC	59.170	60.000	0.00	0.00	0.00	3.71
2279	4135	0.829990	CCCTCTCTTCTGCTTCCTCC	59.170	60.000	0.00	0.00	0.00	4.30
2280	4136	1.622173	CCCTCTCTTCTGCTTCCTCCT	60.622	57.143	0.00	0.00	0.00	3.69
2281	4137	1.756538	CCTCTCTTCTGCTTCCTCCTC	59.243	57.143	0.00	0.00	0.00	3.71
2282	4138	1.756538	CTCTCTTCTGCTTCCTCCTCC	59.243	57.143	0.00	0.00	0.00	4.30
2283	4139	0.829990	CTCTTCTGCTTCCTCCTCCC	59.170	60.000	0.00	0.00	0.00	4.30
2284	4140	0.117140	TCTTCTGCTTCCTCCTCCCA	59.883	55.000	0.00	0.00	0.00	4.37
2285	4141	1.211456	CTTCTGCTTCCTCCTCCCAT	58.789	55.000	0.00	0.00	0.00	4.00
2286	4142	1.140652	CTTCTGCTTCCTCCTCCCATC	59.859	57.143	0.00	0.00	0.00	3.51
2287	4143	0.341258	TCTGCTTCCTCCTCCCATCT	59.659	55.000	0.00	0.00	0.00	2.90
2288	4144	1.211456	CTGCTTCCTCCTCCCATCTT	58.789	55.000	0.00	0.00	0.00	2.40
2289	4145	1.140652	CTGCTTCCTCCTCCCATCTTC	59.859	57.143	0.00	0.00	0.00	2.87
2290	4146	1.274069	TGCTTCCTCCTCCCATCTTCT	60.274	52.381	0.00	0.00	0.00	2.85
2291	4147	1.843206	GCTTCCTCCTCCCATCTTCTT	59.157	52.381	0.00	0.00	0.00	2.52
2292	4148	3.041946	GCTTCCTCCTCCCATCTTCTTA	58.958	50.000	0.00	0.00	0.00	2.10
2308	4164	3.821421	TCTTATTCTTCTTCCTCCCGC	57.179	47.619	0.00	0.00	0.00	6.13
2309	4165	3.104512	TCTTATTCTTCTTCCTCCCGCA	58.895	45.455	0.00	0.00	0.00	5.69
2320	4176	1.367471	CTCCCGCACTCACTGTTGA	59.633	57.895	0.00	0.00	0.00	3.18
2332	4188	0.687354	ACTGTTGACGCCATTCTCCT	59.313	50.000	0.00	0.00	0.00	3.69
2337	4193	1.260538	TGACGCCATTCTCCTGCTCT	61.261	55.000	0.00	0.00	0.00	4.09
2338	4194	0.809241	GACGCCATTCTCCTGCTCTG	60.809	60.000	0.00	0.00	0.00	3.35
2339	4195	2.178890	CGCCATTCTCCTGCTCTGC	61.179	63.158	0.00	0.00	0.00	4.26
2350	4275	1.605971	CTGCTCTGCTCAGGCTCTGA	61.606	60.000	5.03	5.03	38.25	3.27
2387	4603	3.160047	CCCATCCGCTCCTGCTCT	61.160	66.667	0.00	0.00	36.97	4.09
2393	4609	2.511145	CGCTCCTGCTCTTGCTCC	60.511	66.667	0.00	0.00	40.48	4.70
2396	4612	3.306595	CTCCTGCTCTTGCTCCGCA	62.307	63.158	0.00	0.00	40.48	5.69
2400	4616	1.712977	CTGCTCTTGCTCCGCATTCC	61.713	60.000	0.00	0.00	38.76	3.01
2405	4621	2.541547	CTTGCTCCGCATTCCCTCCA	62.542	60.000	0.00	0.00	38.76	3.86
2409	4625	2.438434	CCGCATTCCCTCCACACC	60.438	66.667	0.00	0.00	0.00	4.16
2410	4626	2.438434	CGCATTCCCTCCACACCC	60.438	66.667	0.00	0.00	0.00	4.61
2411	4627	2.043953	GCATTCCCTCCACACCCC	60.044	66.667	0.00	0.00	0.00	4.95
2412	4628	2.917897	GCATTCCCTCCACACCCCA	61.918	63.158	0.00	0.00	0.00	4.96
2413	4629	1.000896	CATTCCCTCCACACCCCAC	60.001	63.158	0.00	0.00	0.00	4.61
2415	4631	1.208165	ATTCCCTCCACACCCCACTC	61.208	60.000	0.00	0.00	0.00	3.51
2416	4632	3.330720	CCCTCCACACCCCACTCC	61.331	72.222	0.00	0.00	0.00	3.85
2418	4634	2.596851	CCTCCACACCCCACTCCTG	61.597	68.421	0.00	0.00	0.00	3.86
2419	4635	3.249189	TCCACACCCCACTCCTGC	61.249	66.667	0.00	0.00	0.00	4.85
2420	4636	3.252284	CCACACCCCACTCCTGCT	61.252	66.667	0.00	0.00	0.00	4.24
2421	4637	2.348998	CACACCCCACTCCTGCTC	59.651	66.667	0.00	0.00	0.00	4.26
2422	4638	2.930562	ACACCCCACTCCTGCTCC	60.931	66.667	0.00	0.00	0.00	4.70
2474	4701	3.419264	CGAGCAGCAGCCTAGATATAG	57.581	52.381	0.00	0.00	43.56	1.31
2505	4732	2.430921	CACGGCCGAGACAGACAC	60.431	66.667	35.90	0.00	0.00	3.67
2506	4733	2.910479	ACGGCCGAGACAGACACA	60.910	61.111	35.90	0.00	0.00	3.72
2507	4734	2.126307	CGGCCGAGACAGACACAG	60.126	66.667	24.07	0.00	0.00	3.66
2508	4735	2.262915	GGCCGAGACAGACACAGG	59.737	66.667	0.00	0.00	0.00	4.00
2509	4736	2.262915	GCCGAGACAGACACAGGG	59.737	66.667	0.00	0.00	0.00	4.45
2510	4737	2.262915	CCGAGACAGACACAGGGC	59.737	66.667	0.00	0.00	0.00	5.19
2511	4738	2.262915	CGAGACAGACACAGGGCC	59.737	66.667	0.00	0.00	0.00	5.80
2512	4739	2.574018	CGAGACAGACACAGGGCCA	61.574	63.158	6.18	0.00	0.00	5.36
2525	4752	1.206849	CAGGGCCAGAGAGAGAAAGAC	59.793	57.143	6.18	0.00	0.00	3.01
2553	4784	3.201708	GGGGATATCATATTGCTGCTCCT	59.798	47.826	4.83	0.00	0.00	3.69
2568	4799	1.690845	GCTCCTCCTCCAAGATCTCCA	60.691	57.143	0.00	0.00	0.00	3.86
2657	4913	0.594110	GAGAGGAATAGGAGGCGTCG	59.406	60.000	0.00	0.00	0.00	5.12
2659	4915	2.029221	GGAATAGGAGGCGTCGGC	59.971	66.667	11.43	11.43	38.90	5.54
2660	4916	2.354773	GAATAGGAGGCGTCGGCG	60.355	66.667	13.61	4.29	41.24	6.46
2662	4918	2.624437	GAATAGGAGGCGTCGGCGTT	62.624	60.000	12.58	0.00	41.24	4.84
2663	4919	2.901051	AATAGGAGGCGTCGGCGTTG	62.901	60.000	12.58	1.19	41.24	4.10
2708	4975	1.003233	GGACAGCAGGAAGTGGGAC	60.003	63.158	0.00	0.00	0.00	4.46
2717	4984	2.106511	CAGGAAGTGGGACCAAGAAGAA	59.893	50.000	0.00	0.00	0.00	2.52
2720	4987	2.278332	AGTGGGACCAAGAAGAAAGC	57.722	50.000	0.00	0.00	0.00	3.51
2722	4989	0.250727	TGGGACCAAGAAGAAAGCGG	60.251	55.000	0.00	0.00	0.00	5.52
2729	4996	1.179174	AAGAAGAAAGCGGGGGCAAC	61.179	55.000	0.00	0.00	0.00	4.17
2730	4997	1.901464	GAAGAAAGCGGGGGCAACA	60.901	57.895	0.00	0.00	39.74	3.33
2731	4998	1.228862	AAGAAAGCGGGGGCAACAT	60.229	52.632	0.00	0.00	39.74	2.71
2732	4999	1.535204	AAGAAAGCGGGGGCAACATG	61.535	55.000	0.00	0.00	39.74	3.21
2733	5000	2.996734	AAAGCGGGGGCAACATGG	60.997	61.111	0.00	0.00	39.74	3.66
2962	5277	1.867233	CAGTTGGTCTCAAGTGTTCCG	59.133	52.381	5.95	0.00	44.89	4.30
2981	5304	3.742369	TCCGAATAACAACTCAAACGGAC	59.258	43.478	0.00	0.00	42.32	4.79
2983	5306	3.120442	CGAATAACAACTCAAACGGACCC	60.120	47.826	0.00	0.00	0.00	4.46
2985	5308	0.549469	AACAACTCAAACGGACCCCT	59.451	50.000	0.00	0.00	0.00	4.79
2986	5309	0.108019	ACAACTCAAACGGACCCCTC	59.892	55.000	0.00	0.00	0.00	4.30
2987	5310	0.949105	CAACTCAAACGGACCCCTCG	60.949	60.000	0.00	0.00	0.00	4.63
3016	5339	2.304761	TCTGCTACGGGATTTTGTCCTT	59.695	45.455	0.00	0.00	46.91	3.36
3059	5382	5.070047	GGAACGAAATCCCTATCAGGAGTAA	59.930	44.000	0.00	0.00	39.95	2.24
3061	5384	5.209659	ACGAAATCCCTATCAGGAGTAACT	58.790	41.667	0.00	0.00	39.95	2.24
3088	5418	3.504906	TCCTAGTACTGTACTGTGTGTGC	59.495	47.826	26.45	0.73	39.81	4.57
3112	5443	4.320935	GCACACCGAATTCCAAACATAAGT	60.321	41.667	0.00	0.00	0.00	2.24
3118	5449	5.335583	CCGAATTCCAAACATAAGTGAGCAA	60.336	40.000	0.00	0.00	0.00	3.91
3126	5457	6.534793	CCAAACATAAGTGAGCAAAAAGTTGT	59.465	34.615	0.00	0.00	37.06	3.32
3127	5458	7.393327	CAAACATAAGTGAGCAAAAAGTTGTG	58.607	34.615	0.00	0.00	37.06	3.33
3128	5459	5.043248	ACATAAGTGAGCAAAAAGTTGTGC	58.957	37.500	0.00	0.00	41.22	4.57
3129	5460	3.591196	AAGTGAGCAAAAAGTTGTGCA	57.409	38.095	8.84	0.00	43.42	4.57
3130	5461	3.155093	AGTGAGCAAAAAGTTGTGCAG	57.845	42.857	8.84	0.00	43.42	4.41
3131	5462	2.159198	AGTGAGCAAAAAGTTGTGCAGG	60.159	45.455	8.84	0.00	43.42	4.85
3132	5463	1.211743	GAGCAAAAAGTTGTGCAGGC	58.788	50.000	8.84	0.00	43.42	4.85
3133	5464	0.536260	AGCAAAAAGTTGTGCAGGCA	59.464	45.000	8.84	0.00	43.42	4.75
3134	5465	0.652071	GCAAAAAGTTGTGCAGGCAC	59.348	50.000	17.11	17.11	46.33	5.01
3155	5486	2.559440	GACCTCTGCATGATTCCACTC	58.441	52.381	0.00	0.00	0.00	3.51
3175	5506	8.470805	TCCACTCTTCATAAGCTTTTCTAGTAG	58.529	37.037	3.20	0.00	0.00	2.57
3176	5507	8.254508	CCACTCTTCATAAGCTTTTCTAGTAGT	58.745	37.037	3.20	0.00	0.00	2.73
3182	5513	9.649167	TTCATAAGCTTTTCTAGTAGTACAACC	57.351	33.333	3.20	0.00	0.00	3.77
3183	5514	9.032624	TCATAAGCTTTTCTAGTAGTACAACCT	57.967	33.333	3.20	0.00	0.00	3.50
3184	5515	9.654663	CATAAGCTTTTCTAGTAGTACAACCTT	57.345	33.333	3.20	0.00	0.00	3.50
3185	5516	7.964604	AAGCTTTTCTAGTAGTACAACCTTG	57.035	36.000	2.52	0.00	0.00	3.61
3186	5517	7.063934	AGCTTTTCTAGTAGTACAACCTTGT	57.936	36.000	2.52	0.00	44.86	3.16
3187	5518	7.506971	AGCTTTTCTAGTAGTACAACCTTGTT	58.493	34.615	2.52	0.00	42.35	2.83
3188	5519	8.645110	AGCTTTTCTAGTAGTACAACCTTGTTA	58.355	33.333	2.52	0.00	42.35	2.41
3189	5520	8.706936	GCTTTTCTAGTAGTACAACCTTGTTAC	58.293	37.037	2.52	0.00	42.35	2.50
3190	5521	9.978044	CTTTTCTAGTAGTACAACCTTGTTACT	57.022	33.333	2.52	2.51	42.35	2.24
3193	5524	8.696043	TCTAGTAGTACAACCTTGTTACTGAA	57.304	34.615	2.52	0.58	42.35	3.02
3198	5529	9.048446	GTAGTACAACCTTGTTACTGAATGAAA	57.952	33.333	0.00	0.00	42.35	2.69
3200	5531	9.131791	AGTACAACCTTGTTACTGAATGAAAAT	57.868	29.630	0.00	0.00	42.35	1.82
3201	5532	9.744468	GTACAACCTTGTTACTGAATGAAAATT	57.256	29.630	0.00	0.00	42.35	1.82
3202	5533	8.871686	ACAACCTTGTTACTGAATGAAAATTC	57.128	30.769	0.00	0.00	38.47	2.17
3204	5535	9.311916	CAACCTTGTTACTGAATGAAAATTCAA	57.688	29.630	0.00	0.00	41.13	2.69
3205	5536	9.883142	AACCTTGTTACTGAATGAAAATTCAAA	57.117	25.926	0.00	0.00	41.13	2.69
3239	5570	7.009179	TCTTGTTCATTATCACTGAGTTCCT	57.991	36.000	0.00	0.00	0.00	3.36
3245	5576	4.737855	TTATCACTGAGTTCCTAGCACC	57.262	45.455	0.00	0.00	0.00	5.01
3249	5580	1.817447	ACTGAGTTCCTAGCACCGTAC	59.183	52.381	0.00	0.00	0.00	3.67
3250	5581	2.093106	CTGAGTTCCTAGCACCGTACT	58.907	52.381	0.00	0.00	0.00	2.73
3251	5582	1.816835	TGAGTTCCTAGCACCGTACTG	59.183	52.381	0.00	0.00	0.00	2.74
3252	5583	0.531200	AGTTCCTAGCACCGTACTGC	59.469	55.000	0.00	0.00	37.44	4.40
3255	5586	0.459899	TCCTAGCACCGTACTGCATG	59.540	55.000	9.50	0.00	39.86	4.06
3264	5595	1.625759	CGTACTGCATGCGCACTGAA	61.626	55.000	14.90	6.26	45.36	3.02
3266	5597	1.009078	TACTGCATGCGCACTGAATC	58.991	50.000	14.90	0.00	45.36	2.52
3324	5656	2.790433	TCACTTGGTGGGCTAATTCAC	58.210	47.619	0.00	0.00	33.87	3.18
3327	5659	0.402504	TTGGTGGGCTAATTCACGGT	59.597	50.000	0.00	0.00	34.93	4.83
3340	5672	1.295792	TCACGGTGTTCTTGTGCTTC	58.704	50.000	8.17	0.00	33.69	3.86
3440	5772	3.003793	GCTGTTCCTTTGTTTGTCCTCTC	59.996	47.826	0.00	0.00	0.00	3.20
3465	5797	5.426504	TCTCATTTCTCTTCTCTGAATGCC	58.573	41.667	0.00	0.00	0.00	4.40
3613	5947	2.429930	CAGGTTCTCCCCGTGCAA	59.570	61.111	0.00	0.00	0.00	4.08
3620	5954	0.181587	TCTCCCCGTGCAACAAAGAA	59.818	50.000	0.00	0.00	35.74	2.52
3625	5959	0.040067	CCGTGCAACAAAGAAGAGGC	60.040	55.000	0.00	0.00	35.74	4.70
3626	5960	0.947244	CGTGCAACAAAGAAGAGGCT	59.053	50.000	0.00	0.00	35.74	4.58
3630	5964	1.068679	GCAACAAAGAAGAGGCTGAGC	60.069	52.381	0.00	0.00	0.00	4.26
3689	6026	3.243501	GCAACCACATAATCGATGCCATT	60.244	43.478	0.00	0.00	39.39	3.16
3810	6151	1.278127	TCTGGGAATCCTTTCGGTGAC	59.722	52.381	0.00	0.00	32.28	3.67
3957	6299	6.594159	TGTTGCTAGCTATACTCAAGGTTTTC	59.406	38.462	17.23	0.00	0.00	2.29
3979	6321	5.640147	TCCCCCATTATCATGTGGATTAAC	58.360	41.667	1.70	0.00	37.72	2.01
4142	6485	6.127366	CGTAAGTGTACTTATCTTTACCCCCA	60.127	42.308	7.66	0.00	40.20	4.96
4189	6532	3.065019	ACAACGTTGAAACACATCTGC	57.935	42.857	33.66	0.00	0.00	4.26
4190	6533	2.036217	CAACGTTGAAACACATCTGCG	58.964	47.619	23.90	0.00	0.00	5.18
4191	6534	1.577468	ACGTTGAAACACATCTGCGA	58.423	45.000	0.00	0.00	0.00	5.10
4192	6535	1.937223	ACGTTGAAACACATCTGCGAA	59.063	42.857	0.00	0.00	0.00	4.70
4193	6536	2.353269	ACGTTGAAACACATCTGCGAAA	59.647	40.909	0.00	0.00	0.00	3.46
4194	6537	2.966708	CGTTGAAACACATCTGCGAAAG	59.033	45.455	0.00	0.00	0.00	2.62
4245	6588	9.155975	GATATGTGAGCTTCTAAAAGTGAGAAA	57.844	33.333	0.00	0.00	32.64	2.52
4252	6595	8.572855	AGCTTCTAAAAGTGAGAAAGCATAAT	57.427	30.769	7.54	0.00	32.64	1.28
4270	6613	9.933723	AAGCATAATTTAAACAGAAGCAATTCT	57.066	25.926	0.00	0.00	0.00	2.40
4404	6747	5.864628	AGGAAGATTTTAAGCACGTCTTC	57.135	39.130	5.16	5.16	42.38	2.87
4433	6776	2.744741	GCTTTAGCAGTTCCTCTTGTCC	59.255	50.000	0.00	0.00	41.59	4.02
4631	6975	6.291377	CCACTGTATACTTAGCCATGTTGAT	58.709	40.000	4.17	0.00	0.00	2.57
4648	6992	6.065976	TGTTGATGTTAACCTCCATCTGAT	57.934	37.500	2.48	0.00	38.59	2.90
4803	7148	8.203485	TGTTGAGGAAAATAATTCTTGTTGCTT	58.797	29.630	0.00	0.00	0.00	3.91
4846	7191	8.218488	TCTCCTTTCATGTATAGAGCTACTGTA	58.782	37.037	0.00	0.00	0.00	2.74
4862	7207	9.250624	GAGCTACTGTAATTTCACTGTTATAGG	57.749	37.037	0.00	0.00	33.32	2.57
4886	7231	5.215160	CACCACTTAAGATTCTTGTTGTGC	58.785	41.667	10.09	0.00	0.00	4.57
4891	7236	6.364165	CACTTAAGATTCTTGTTGTGCCATTG	59.636	38.462	10.09	0.00	0.00	2.82
4911	7256	3.287222	TGTACAGTTTTGCTTCCTTGCT	58.713	40.909	0.00	0.00	0.00	3.91
4981	7326	9.569122	GCAAGGGTTTTATAATGGTAAGATAGA	57.431	33.333	0.00	0.00	0.00	1.98
5006	7351	2.175499	CCTGGGCCATCTTGGATAGAAA	59.825	50.000	6.72	0.00	40.96	2.52
5046	7393	5.175673	GGCAGACTCTGTTTATTTGTTTTGC	59.824	40.000	7.89	0.00	33.43	3.68
5050	7398	7.377928	CAGACTCTGTTTATTTGTTTTGCTGAG	59.622	37.037	0.00	0.00	0.00	3.35
5095	7443	6.090898	GCATACTGTAGTTACACTGAACTTGG	59.909	42.308	0.00	0.00	40.22	3.61
5161	7509	0.667993	ACCACAATCTTGCACCAACG	59.332	50.000	0.00	0.00	0.00	4.10
5575	7951	8.237811	AGGTAGTTTCACTCAAATTTTGATGT	57.762	30.769	12.04	9.57	39.30	3.06
5744	8120	1.692411	ACCAAAGTTTCTCCTGTGGC	58.308	50.000	0.00	0.00	42.75	5.01
5752	8128	2.479566	TTCTCCTGTGGCTGATTCAC	57.520	50.000	0.00	0.00	35.82	3.18
5798	8180	4.380761	CCTGCAATGCTTGTTAATGTGCTA	60.381	41.667	6.82	0.00	0.00	3.49
5857	8269	4.081697	ACAAACCTAAACTTATGCATGCCC	60.082	41.667	16.68	0.00	0.00	5.36
5943	8355	6.704493	CACTTCTTACTTGCCTACTGTTAACA	59.296	38.462	8.28	8.28	0.00	2.41
5997	8409	4.966168	TGGCATGAGGAGTTAACATACCTA	59.034	41.667	15.46	7.86	31.11	3.08
6091	8507	3.279434	CCTTGTATTGGGGTAAGCAGTC	58.721	50.000	0.00	0.00	0.00	3.51
6233	8654	1.535028	CCTGTTTATGCGCTTGTCACA	59.465	47.619	9.73	6.42	0.00	3.58
6260	8681	9.689976	CAGGTAACAATTTGTTTATTCACATGA	57.310	29.630	19.15	0.00	41.45	3.07
6270	8691	4.968812	TTATTCACATGACATGCCACAG	57.031	40.909	15.49	1.31	0.00	3.66
6271	8692	0.883153	TTCACATGACATGCCACAGC	59.117	50.000	15.49	0.00	40.48	4.40
6536	8970	0.892358	TTCGTACGGAGACCAGCACT	60.892	55.000	16.52	0.00	0.00	4.40
6925	9362	4.416901	TGCCCATGCATAGGAGGA	57.583	55.556	16.01	4.90	44.23	3.71
7199	9637	4.776435	TGATCTTCACAATATCTGCCCA	57.224	40.909	0.00	0.00	0.00	5.36
7328	9766	2.680805	GCAGCACCCTAATCTGCTTACA	60.681	50.000	6.24	0.00	46.93	2.41
7559	9997	3.298320	CCCCCACCCCAATTACAAG	57.702	57.895	0.00	0.00	0.00	3.16
7572	10270	7.047271	CCCCAATTACAAGAAAATTATGGTGG	58.953	38.462	0.00	0.00	0.00	4.61
7750	10448	7.364522	TCTAGATCACCAATTCGTCTTTTTG	57.635	36.000	0.00	0.00	0.00	2.44
7798	10496	6.795098	TGTACGAAATTGTACTGAGCAATT	57.205	33.333	11.27	7.82	45.21	2.32
7801	10499	6.560253	ACGAAATTGTACTGAGCAATTCTT	57.440	33.333	11.94	2.20	43.30	2.52
7802	10500	6.373779	ACGAAATTGTACTGAGCAATTCTTG	58.626	36.000	11.94	8.85	43.30	3.02
7803	10501	6.017109	ACGAAATTGTACTGAGCAATTCTTGT	60.017	34.615	11.94	9.25	43.30	3.16
7804	10502	6.521133	CGAAATTGTACTGAGCAATTCTTGTC	59.479	38.462	11.94	7.36	43.30	3.18
7806	10504	7.516198	AATTGTACTGAGCAATTCTTGTCTT	57.484	32.000	0.00	0.00	41.13	3.01
7807	10505	8.621532	AATTGTACTGAGCAATTCTTGTCTTA	57.378	30.769	0.00	0.00	41.13	2.10
7808	10506	7.658179	TTGTACTGAGCAATTCTTGTCTTAG	57.342	36.000	0.00	0.00	31.64	2.18
7810	10508	7.615403	TGTACTGAGCAATTCTTGTCTTAGAT	58.385	34.615	0.00	0.00	30.70	1.98
7811	10509	8.097038	TGTACTGAGCAATTCTTGTCTTAGATT	58.903	33.333	0.00	0.00	30.70	2.40
7813	10511	7.814642	ACTGAGCAATTCTTGTCTTAGATTTG	58.185	34.615	0.00	0.00	38.02	2.32
7814	10512	7.446625	ACTGAGCAATTCTTGTCTTAGATTTGT	59.553	33.333	0.00	0.00	37.61	2.83
7815	10513	7.810658	TGAGCAATTCTTGTCTTAGATTTGTC	58.189	34.615	0.00	0.00	37.61	3.18
7816	10514	7.663081	TGAGCAATTCTTGTCTTAGATTTGTCT	59.337	33.333	0.00	0.00	37.61	3.41
7817	10515	9.155975	GAGCAATTCTTGTCTTAGATTTGTCTA	57.844	33.333	0.00	0.00	37.61	2.59
7818	10516	9.507329	AGCAATTCTTGTCTTAGATTTGTCTAA	57.493	29.630	0.00	0.00	37.61	2.10
7824	10522	9.582431	TCTTGTCTTAGATTTGTCTAAATACGG	57.418	33.333	0.26	0.99	36.66	4.02
7825	10523	9.582431	CTTGTCTTAGATTTGTCTAAATACGGA	57.418	33.333	0.26	0.00	36.66	4.69
7846	10544	8.345224	ACGGATTTATCTAGTTACGTTTTAGC	57.655	34.615	0.00	0.00	0.00	3.09
7847	10545	7.166473	ACGGATTTATCTAGTTACGTTTTAGCG	59.834	37.037	0.00	0.00	37.94	4.26
7849	10547	8.811378	GGATTTATCTAGTTACGTTTTAGCGTT	58.189	33.333	0.00	0.00	43.04	4.84

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
20	21	1.038681	GGTGCATGCATGGATCCACA	61.039	55.000	25.64	12.43	0.00	4.17
48	49	8.202811	CCTACATGATATATGATGGGAGTTCAG	58.797	40.741	15.42	2.73	0.00	3.02
76	77	3.211045	ACCATACAACCAATCATACGCC	58.789	45.455	0.00	0.00	0.00	5.68
89	90	8.255206	AGATAATAGACAACGTTGACCATACAA	58.745	33.333	33.66	12.01	0.00	2.41
97	98	8.002984	TGGTGATAGATAATAGACAACGTTGA	57.997	34.615	33.66	13.02	0.00	3.18
102	103	7.445945	AGGCTTGGTGATAGATAATAGACAAC	58.554	38.462	0.00	0.00	0.00	3.32
121	122	4.553323	CAAGATTGAAGAACCAAGGCTTG	58.447	43.478	20.31	20.31	36.73	4.01
122	123	3.006217	GCAAGATTGAAGAACCAAGGCTT	59.994	43.478	0.00	0.00	0.00	4.35
123	124	2.560105	GCAAGATTGAAGAACCAAGGCT	59.440	45.455	0.00	0.00	0.00	4.58
124	125	2.353109	GGCAAGATTGAAGAACCAAGGC	60.353	50.000	0.00	0.00	0.00	4.35
125	126	2.232208	GGGCAAGATTGAAGAACCAAGG	59.768	50.000	0.00	0.00	0.00	3.61
126	127	3.057033	CAGGGCAAGATTGAAGAACCAAG	60.057	47.826	0.00	0.00	0.00	3.61
130	131	5.824624	TGATATCAGGGCAAGATTGAAGAAC	59.175	40.000	0.00	0.00	0.00	3.01
133	134	4.518211	GGTGATATCAGGGCAAGATTGAAG	59.482	45.833	5.42	0.00	0.00	3.02
149	150	1.492176	CAGAACAGGGCCTGGTGATAT	59.508	52.381	35.34	12.48	35.51	1.63
150	151	0.911769	CAGAACAGGGCCTGGTGATA	59.088	55.000	35.34	0.00	35.51	2.15
173	243	4.445052	CACCGTAGACGTAAAACATCAACA	59.555	41.667	0.85	0.00	37.74	3.33
526	596	1.433053	CCGCCGCCATCGATTTGTAA	61.433	55.000	0.00	0.00	38.10	2.41
550	620	1.595993	TACGGAGTGGAGCAGTCAGC	61.596	60.000	0.00	0.00	45.73	4.26
551	621	0.171455	GTACGGAGTGGAGCAGTCAG	59.829	60.000	0.00	0.00	45.73	3.51
552	622	1.248785	GGTACGGAGTGGAGCAGTCA	61.249	60.000	0.00	0.00	45.73	3.41
554	624	0.542232	AAGGTACGGAGTGGAGCAGT	60.542	55.000	0.00	0.00	45.73	4.40
556	626	1.180029	GTAAGGTACGGAGTGGAGCA	58.820	55.000	0.00	0.00	45.73	4.26
558	628	1.134560	GCTGTAAGGTACGGAGTGGAG	59.865	57.143	0.00	0.00	45.73	3.86
559	629	1.180029	GCTGTAAGGTACGGAGTGGA	58.820	55.000	0.00	0.00	45.73	4.02
560	630	0.892755	TGCTGTAAGGTACGGAGTGG	59.107	55.000	0.00	0.00	45.73	4.00
561	631	1.736032	GCTGCTGTAAGGTACGGAGTG	60.736	57.143	0.00	0.00	45.73	3.51
563	633	0.525668	CGCTGCTGTAAGGTACGGAG	60.526	60.000	0.00	0.00	37.22	4.63
564	634	0.961857	TCGCTGCTGTAAGGTACGGA	60.962	55.000	0.00	0.00	37.22	4.69
565	635	0.801067	GTCGCTGCTGTAAGGTACGG	60.801	60.000	0.00	0.00	38.10	4.02
566	636	0.109458	TGTCGCTGCTGTAAGGTACG	60.109	55.000	0.00	0.00	0.00	3.67
567	637	1.630148	CTGTCGCTGCTGTAAGGTAC	58.370	55.000	0.00	0.00	0.00	3.34
568	638	0.108804	GCTGTCGCTGCTGTAAGGTA	60.109	55.000	0.00	0.00	0.00	3.08
569	639	1.374758	GCTGTCGCTGCTGTAAGGT	60.375	57.895	0.00	0.00	0.00	3.50
570	640	1.079543	AGCTGTCGCTGCTGTAAGG	60.080	57.895	9.65	0.00	46.86	2.69
600	680	2.916640	TGCTTGTGTGTCATCTGTGAA	58.083	42.857	0.00	0.00	35.80	3.18
608	688	2.988010	ACTCTCTTGCTTGTGTGTCA	57.012	45.000	0.00	0.00	0.00	3.58
609	689	3.462021	AGAACTCTCTTGCTTGTGTGTC	58.538	45.455	0.00	0.00	0.00	3.67
610	690	3.462021	GAGAACTCTCTTGCTTGTGTGT	58.538	45.455	0.00	0.00	39.81	3.72
611	691	2.805099	GGAGAACTCTCTTGCTTGTGTG	59.195	50.000	6.68	0.00	42.48	3.82
612	692	2.703007	AGGAGAACTCTCTTGCTTGTGT	59.297	45.455	6.68	0.00	42.48	3.72
613	693	3.065655	CAGGAGAACTCTCTTGCTTGTG	58.934	50.000	5.97	0.00	41.95	3.33
614	694	3.399440	CAGGAGAACTCTCTTGCTTGT	57.601	47.619	5.97	0.00	41.95	3.16
622	702	2.484889	ACAAAACGCAGGAGAACTCTC	58.515	47.619	0.00	0.00	42.14	3.20
638	718	9.615295	GTTGTGTGTTTTACTTTTCTCTACAAA	57.385	29.630	0.00	0.00	0.00	2.83
651	731	5.554822	TCCAACTCTGTTGTGTGTTTTAC	57.445	39.130	9.20	0.00	0.00	2.01
652	732	5.708230	AGTTCCAACTCTGTTGTGTGTTTTA	59.292	36.000	9.20	0.00	32.86	1.52
654	734	4.079253	AGTTCCAACTCTGTTGTGTGTTT	58.921	39.130	9.20	0.00	32.86	2.83
655	735	3.686016	AGTTCCAACTCTGTTGTGTGTT	58.314	40.909	9.20	0.00	32.86	3.32
695	800	5.985781	TGAGAAACTCTGTTGCGTAATTTC	58.014	37.500	0.00	0.00	0.00	2.17
718	823	5.826586	TGATGTAAACAACAGTTTCGCATT	58.173	33.333	0.00	0.00	42.70	3.56
719	824	5.238432	TCTGATGTAAACAACAGTTTCGCAT	59.762	36.000	16.84	4.33	44.16	4.73
720	825	4.572795	TCTGATGTAAACAACAGTTTCGCA	59.427	37.500	16.84	0.00	44.16	5.10
721	826	5.090652	TCTGATGTAAACAACAGTTTCGC	57.909	39.130	16.84	0.00	44.16	4.70
725	830	9.167311	GGATATCTTCTGATGTAAACAACAGTT	57.833	33.333	16.84	6.67	44.16	3.16
726	831	8.321353	TGGATATCTTCTGATGTAAACAACAGT	58.679	33.333	16.84	4.12	44.16	3.55
727	832	8.722480	TGGATATCTTCTGATGTAAACAACAG	57.278	34.615	12.68	12.68	44.86	3.16
729	834	8.778358	GGATGGATATCTTCTGATGTAAACAAC	58.222	37.037	2.05	0.00	34.32	3.32
730	835	8.493607	TGGATGGATATCTTCTGATGTAAACAA	58.506	33.333	2.05	0.00	34.32	2.83
731	836	7.933577	GTGGATGGATATCTTCTGATGTAAACA	59.066	37.037	2.05	0.00	34.32	2.83
740	860	2.332104	CGCGTGGATGGATATCTTCTG	58.668	52.381	0.00	0.00	33.68	3.02
759	879	1.378514	CTCAATTCCACCCCCACCG	60.379	63.158	0.00	0.00	0.00	4.94
782	902	1.852157	TTCCTCCCATGTCACCAGGC	61.852	60.000	0.00	0.00	0.00	4.85
794	914	0.840722	TCCAACACCCTCTTCCTCCC	60.841	60.000	0.00	0.00	0.00	4.30
798	918	0.840722	TCCCTCCAACACCCTCTTCC	60.841	60.000	0.00	0.00	0.00	3.46
805	925	2.032071	CCGTGTCCCTCCAACACC	59.968	66.667	1.17	0.00	43.24	4.16
806	926	2.032071	CCCGTGTCCCTCCAACAC	59.968	66.667	0.00	0.00	42.83	3.32
807	927	2.446994	ACCCGTGTCCCTCCAACA	60.447	61.111	0.00	0.00	0.00	3.33
840	960	4.082125	CCATTACATTAATCCCTGCCTCC	58.918	47.826	0.00	0.00	0.00	4.30
844	964	3.005791	GTGCCCATTACATTAATCCCTGC	59.994	47.826	0.00	0.00	0.00	4.85
868	988	0.883833	CACCAGAATCAACCAGCACC	59.116	55.000	0.00	0.00	0.00	5.01
978	1098	0.175302	CTCCAGAGAAGCGCACTGAT	59.825	55.000	11.47	0.00	37.38	2.90
981	1101	2.264166	GCTCCAGAGAAGCGCACT	59.736	61.111	11.47	8.76	0.00	4.40
982	1102	3.184683	CGCTCCAGAGAAGCGCAC	61.185	66.667	11.47	2.78	44.91	5.34
986	1106	0.532417	ATGCATCGCTCCAGAGAAGC	60.532	55.000	0.00	1.13	38.65	3.86
988	1108	0.179065	CCATGCATCGCTCCAGAGAA	60.179	55.000	0.00	0.00	0.00	2.87
989	1109	1.444672	CCATGCATCGCTCCAGAGA	59.555	57.895	0.00	0.00	0.00	3.10
990	1110	1.597302	CCCATGCATCGCTCCAGAG	60.597	63.158	0.00	0.00	0.00	3.35
992	1112	3.285215	GCCCATGCATCGCTCCAG	61.285	66.667	0.00	0.00	37.47	3.86
993	1113	4.112433	TGCCCATGCATCGCTCCA	62.112	61.111	14.65	0.00	44.23	3.86
1064	1184	3.957586	CCCTGGCAGCACTGGTGA	61.958	66.667	9.56	0.00	32.22	4.02
1111	1231	2.430921	GTGCAGTCCGTCCTCACG	60.431	66.667	0.00	0.00	46.29	4.35
1188	1365	6.112734	ACGGAGTTTAATGTTATCATCAGCA	58.887	36.000	0.00	0.00	37.78	4.41
1207	1384	8.723311	TGTATATTGTGGTTTAAAGAAACGGAG	58.277	33.333	0.00	0.00	45.06	4.63
1208	1385	8.618702	TGTATATTGTGGTTTAAAGAAACGGA	57.381	30.769	0.00	0.00	45.06	4.69
1211	1388	9.498307	CGGATGTATATTGTGGTTTAAAGAAAC	57.502	33.333	0.00	0.00	43.65	2.78
1215	1401	7.803189	GCATCGGATGTATATTGTGGTTTAAAG	59.197	37.037	18.54	0.00	0.00	1.85
1219	1405	4.518970	GGCATCGGATGTATATTGTGGTTT	59.481	41.667	18.54	0.00	0.00	3.27
1223	1489	4.568956	TCTGGCATCGGATGTATATTGTG	58.431	43.478	18.54	2.74	0.00	3.33
1241	1507	4.563374	CCAACCCCAAAGCTAAAAATCTGG	60.563	45.833	0.00	0.00	0.00	3.86
1264	1530	2.809010	GGTCGACTGAGGCCTAGC	59.191	66.667	16.46	0.00	32.02	3.42
1265	1531	1.440938	CTCGGTCGACTGAGGCCTAG	61.441	65.000	36.62	18.15	43.83	3.02
1266	1532	1.451567	CTCGGTCGACTGAGGCCTA	60.452	63.158	36.62	12.88	43.83	3.93
1267	1533	2.559922	ATCTCGGTCGACTGAGGCCT	62.560	60.000	40.33	27.45	46.70	5.19
1269	1535	0.173708	AAATCTCGGTCGACTGAGGC	59.826	55.000	40.33	15.30	46.70	4.70
1276	1542	4.976224	TCTGTGATTAAATCTCGGTCGA	57.024	40.909	0.00	0.00	32.48	4.20
1278	1544	8.304596	TGGTATATCTGTGATTAAATCTCGGTC	58.695	37.037	0.00	0.00	32.48	4.79
1279	1545	8.190326	TGGTATATCTGTGATTAAATCTCGGT	57.810	34.615	0.00	0.00	32.48	4.69
1280	1546	9.091784	CATGGTATATCTGTGATTAAATCTCGG	57.908	37.037	0.00	0.00	0.00	4.63
1281	1547	9.091784	CCATGGTATATCTGTGATTAAATCTCG	57.908	37.037	2.57	0.00	0.00	4.04
1282	1548	9.388506	CCCATGGTATATCTGTGATTAAATCTC	57.611	37.037	11.73	0.00	0.00	2.75
1288	1554	9.387397	TCTTAACCCATGGTATATCTGTGATTA	57.613	33.333	11.73	0.00	33.12	1.75
1289	1555	8.157476	GTCTTAACCCATGGTATATCTGTGATT	58.843	37.037	11.73	0.00	33.12	2.57
1290	1556	7.514127	AGTCTTAACCCATGGTATATCTGTGAT	59.486	37.037	11.73	0.00	33.12	3.06
1291	1557	6.844388	AGTCTTAACCCATGGTATATCTGTGA	59.156	38.462	11.73	0.00	33.12	3.58
1292	1558	7.067496	AGTCTTAACCCATGGTATATCTGTG	57.933	40.000	11.73	0.00	33.12	3.66
1293	1559	7.347222	TCAAGTCTTAACCCATGGTATATCTGT	59.653	37.037	11.73	0.00	33.12	3.41
1294	1560	7.735917	TCAAGTCTTAACCCATGGTATATCTG	58.264	38.462	11.73	0.00	33.12	2.90
1295	1561	7.789831	TCTCAAGTCTTAACCCATGGTATATCT	59.210	37.037	11.73	0.00	33.12	1.98
1296	1562	7.963532	TCTCAAGTCTTAACCCATGGTATATC	58.036	38.462	11.73	0.00	33.12	1.63
1297	1563	7.931015	TCTCAAGTCTTAACCCATGGTATAT	57.069	36.000	11.73	0.00	33.12	0.86
1298	1564	7.016268	GGATCTCAAGTCTTAACCCATGGTATA	59.984	40.741	11.73	0.00	33.12	1.47
1299	1565	6.183361	GGATCTCAAGTCTTAACCCATGGTAT	60.183	42.308	11.73	0.93	33.12	2.73
1300	1566	5.130477	GGATCTCAAGTCTTAACCCATGGTA	59.870	44.000	11.73	0.00	33.12	3.25
1301	1567	4.080299	GGATCTCAAGTCTTAACCCATGGT	60.080	45.833	11.73	0.00	37.65	3.55
1302	1568	4.080356	TGGATCTCAAGTCTTAACCCATGG	60.080	45.833	4.14	4.14	0.00	3.66
1303	1569	5.102953	TGGATCTCAAGTCTTAACCCATG	57.897	43.478	0.00	0.00	0.00	3.66
1304	1570	5.032846	TCTGGATCTCAAGTCTTAACCCAT	58.967	41.667	0.00	0.00	0.00	4.00
1305	1571	4.425772	TCTGGATCTCAAGTCTTAACCCA	58.574	43.478	0.00	0.00	0.00	4.51
1306	1572	5.622346	ATCTGGATCTCAAGTCTTAACCC	57.378	43.478	0.00	0.00	0.00	4.11
1307	1573	7.225734	GCTAAATCTGGATCTCAAGTCTTAACC	59.774	40.741	0.00	0.00	0.00	2.85
1308	1574	7.766278	TGCTAAATCTGGATCTCAAGTCTTAAC	59.234	37.037	0.00	0.00	0.00	2.01
1309	1575	7.851228	TGCTAAATCTGGATCTCAAGTCTTAA	58.149	34.615	0.00	0.00	0.00	1.85
1310	1576	7.423844	TGCTAAATCTGGATCTCAAGTCTTA	57.576	36.000	0.00	0.00	0.00	2.10
1311	1577	6.305272	TGCTAAATCTGGATCTCAAGTCTT	57.695	37.500	0.00	0.00	0.00	3.01
1312	1578	5.946942	TGCTAAATCTGGATCTCAAGTCT	57.053	39.130	0.00	0.00	0.00	3.24
1313	1579	6.257630	GTCTTGCTAAATCTGGATCTCAAGTC	59.742	42.308	0.00	0.00	33.48	3.01
1314	1580	6.070309	AGTCTTGCTAAATCTGGATCTCAAGT	60.070	38.462	0.00	0.00	33.48	3.16
1315	1581	6.258287	CAGTCTTGCTAAATCTGGATCTCAAG	59.742	42.308	0.00	0.00	0.00	3.02
1316	1582	6.111382	CAGTCTTGCTAAATCTGGATCTCAA	58.889	40.000	0.00	0.00	0.00	3.02
1317	1583	5.188555	ACAGTCTTGCTAAATCTGGATCTCA	59.811	40.000	0.00	0.00	0.00	3.27
1318	1584	5.669477	ACAGTCTTGCTAAATCTGGATCTC	58.331	41.667	0.00	0.00	0.00	2.75
1319	1585	5.188555	TGACAGTCTTGCTAAATCTGGATCT	59.811	40.000	1.31	0.00	0.00	2.75
1320	1586	5.293079	GTGACAGTCTTGCTAAATCTGGATC	59.707	44.000	1.31	0.00	0.00	3.36
1321	1587	5.181748	GTGACAGTCTTGCTAAATCTGGAT	58.818	41.667	1.31	0.00	0.00	3.41
1322	1588	4.569943	GTGACAGTCTTGCTAAATCTGGA	58.430	43.478	1.31	0.00	0.00	3.86
1323	1589	3.369147	CGTGACAGTCTTGCTAAATCTGG	59.631	47.826	1.31	0.00	0.00	3.86
1324	1590	3.990469	ACGTGACAGTCTTGCTAAATCTG	59.010	43.478	1.31	0.00	0.00	2.90
1325	1591	4.238514	GACGTGACAGTCTTGCTAAATCT	58.761	43.478	0.00	0.00	38.09	2.40
1326	1592	3.059570	CGACGTGACAGTCTTGCTAAATC	59.940	47.826	0.00	0.00	38.90	2.17
1327	1593	2.987149	CGACGTGACAGTCTTGCTAAAT	59.013	45.455	0.00	0.00	38.90	1.40
1328	1594	2.223641	ACGACGTGACAGTCTTGCTAAA	60.224	45.455	0.00	0.00	38.90	1.85
1329	1595	1.335810	ACGACGTGACAGTCTTGCTAA	59.664	47.619	0.00	0.00	38.90	3.09
1330	1596	0.949397	ACGACGTGACAGTCTTGCTA	59.051	50.000	0.00	0.00	38.90	3.49
1331	1597	0.949397	TACGACGTGACAGTCTTGCT	59.051	50.000	11.56	0.00	38.90	3.91
1332	1598	1.912110	GATACGACGTGACAGTCTTGC	59.088	52.381	11.56	0.00	38.90	4.01
1333	1599	2.161808	AGGATACGACGTGACAGTCTTG	59.838	50.000	11.56	0.00	46.39	3.02
1334	1600	2.161808	CAGGATACGACGTGACAGTCTT	59.838	50.000	11.56	0.00	46.39	3.01
1335	1601	1.738350	CAGGATACGACGTGACAGTCT	59.262	52.381	11.56	0.00	46.39	3.24
1336	1602	1.736126	TCAGGATACGACGTGACAGTC	59.264	52.381	11.56	0.00	46.39	3.51
1337	1603	1.817357	TCAGGATACGACGTGACAGT	58.183	50.000	11.56	0.00	46.39	3.55
1338	1604	3.108881	CAATCAGGATACGACGTGACAG	58.891	50.000	11.56	0.00	46.39	3.51
1339	1605	2.159296	CCAATCAGGATACGACGTGACA	60.159	50.000	11.56	0.00	46.39	3.58
1340	1606	2.098607	TCCAATCAGGATACGACGTGAC	59.901	50.000	11.56	4.23	43.07	3.67
1341	1607	2.371306	TCCAATCAGGATACGACGTGA	58.629	47.619	11.56	0.00	43.07	4.35
1342	1608	2.863401	TCCAATCAGGATACGACGTG	57.137	50.000	11.56	0.00	43.07	4.49
1358	1624	2.016318	CGACTAATTGCCTTGCATCCA	58.984	47.619	0.00	0.00	38.76	3.41
1362	1628	0.804364	CAGCGACTAATTGCCTTGCA	59.196	50.000	0.00	0.00	35.57	4.08
1383	1649	2.158058	CCAAACTGAAAATTGCCATGCG	59.842	45.455	0.00	0.00	0.00	4.73
1399	1736	5.405269	GTGTAAGATTTGCCATGTTCCAAAC	59.595	40.000	5.81	0.00	34.18	2.93
1403	1740	4.782019	TGTGTAAGATTTGCCATGTTCC	57.218	40.909	0.00	0.00	0.00	3.62
1411	1748	5.091431	GTCATGCTCTTGTGTAAGATTTGC	58.909	41.667	0.00	0.00	41.83	3.68
1412	1749	5.319139	CGTCATGCTCTTGTGTAAGATTTG	58.681	41.667	0.00	0.00	41.83	2.32
1421	1758	2.624316	AATTGCGTCATGCTCTTGTG	57.376	45.000	0.00	0.00	46.63	3.33
1422	1759	4.970662	ATAAATTGCGTCATGCTCTTGT	57.029	36.364	0.00	0.00	46.63	3.16
1426	1763	7.121974	ACATAGTATAAATTGCGTCATGCTC	57.878	36.000	0.00	0.00	46.63	4.26
1427	1764	7.496529	AACATAGTATAAATTGCGTCATGCT	57.503	32.000	0.00	0.00	46.63	3.79
1432	1769	6.083265	CGCGAAAACATAGTATAAATTGCGTC	59.917	38.462	0.00	1.73	35.17	5.19
1434	1771	5.899696	ACGCGAAAACATAGTATAAATTGCG	59.100	36.000	15.93	13.30	44.24	4.85
1435	1772	6.343924	GCACGCGAAAACATAGTATAAATTGC	60.344	38.462	15.93	0.64	0.00	3.56
1436	1773	6.140108	GGCACGCGAAAACATAGTATAAATTG	59.860	38.462	15.93	0.00	0.00	2.32
1437	1774	6.183360	TGGCACGCGAAAACATAGTATAAATT	60.183	34.615	15.93	0.00	0.00	1.82
1439	1776	4.630505	TGGCACGCGAAAACATAGTATAAA	59.369	37.500	15.93	0.00	0.00	1.40
1440	1777	4.182339	TGGCACGCGAAAACATAGTATAA	58.818	39.130	15.93	0.00	0.00	0.98
1445	1782	1.882198	CTTGGCACGCGAAAACATAG	58.118	50.000	15.93	0.00	0.00	2.23
1460	1797	0.321653	AGCTAAACGTCCAGGCTTGG	60.322	55.000	8.96	8.96	46.49	3.61
1464	1801	2.399356	GCCAGCTAAACGTCCAGGC	61.399	63.158	0.00	0.00	0.00	4.85
1473	1810	6.372659	CAGATTTTTAGAGACTGCCAGCTAAA	59.627	38.462	0.00	0.00	32.69	1.85
1476	1813	4.260170	CAGATTTTTAGAGACTGCCAGCT	58.740	43.478	0.00	0.00	0.00	4.24
1496	1833	9.226606	TGGTTAGTATTAAAAATCTGACACCAG	57.773	33.333	0.00	0.00	41.74	4.00
1497	1834	9.747898	ATGGTTAGTATTAAAAATCTGACACCA	57.252	29.630	0.00	0.00	0.00	4.17
1551	1888	5.937540	TCTCACGCCTATCAAATCAAGAAAA	59.062	36.000	0.00	0.00	0.00	2.29
1552	1889	5.487433	TCTCACGCCTATCAAATCAAGAAA	58.513	37.500	0.00	0.00	0.00	2.52
1554	1891	4.736126	TCTCACGCCTATCAAATCAAGA	57.264	40.909	0.00	0.00	0.00	3.02
1555	1892	4.272018	CCTTCTCACGCCTATCAAATCAAG	59.728	45.833	0.00	0.00	0.00	3.02
1557	1894	3.450817	TCCTTCTCACGCCTATCAAATCA	59.549	43.478	0.00	0.00	0.00	2.57
1559	1896	4.080863	ACTTCCTTCTCACGCCTATCAAAT	60.081	41.667	0.00	0.00	0.00	2.32
1566	1904	1.048601	TCAACTTCCTTCTCACGCCT	58.951	50.000	0.00	0.00	0.00	5.52
1579	1917	1.152989	TAAACGCGCACGGTCAACTT	61.153	50.000	5.73	0.00	39.25	2.66
1594	1932	5.508994	CCCGGATTTGATGGGCTAAATAAAC	60.509	44.000	0.73	0.00	35.82	2.01
1595	1933	4.586841	CCCGGATTTGATGGGCTAAATAAA	59.413	41.667	0.73	0.00	35.82	1.40
1596	1934	4.148838	CCCGGATTTGATGGGCTAAATAA	58.851	43.478	0.73	0.00	35.82	1.40
1597	1935	3.761897	CCCGGATTTGATGGGCTAAATA	58.238	45.455	0.73	0.00	35.82	1.40
1598	1936	2.597455	CCCGGATTTGATGGGCTAAAT	58.403	47.619	0.73	0.00	35.82	1.40
1599	1937	2.065899	CCCGGATTTGATGGGCTAAA	57.934	50.000	0.73	0.00	35.82	1.85
1600	1938	3.819245	CCCGGATTTGATGGGCTAA	57.181	52.632	0.73	0.00	35.82	3.09
1644	2014	4.072088	GTGTGTAGGTGTGCGCGC	62.072	66.667	27.26	27.26	0.00	6.86
1645	2015	3.762992	CGTGTGTAGGTGTGCGCG	61.763	66.667	0.00	0.00	0.00	6.86
1733	2104	2.173996	CCCTTTTTCTCCCCCGCTTATA	59.826	50.000	0.00	0.00	0.00	0.98
1739	3568	2.590282	TAAACCCTTTTTCTCCCCCG	57.410	50.000	0.00	0.00	0.00	5.73
1755	3584	9.101655	GCGGTTGGAGACTTAATTAACTATAAA	57.898	33.333	0.00	0.00	0.00	1.40
1756	3585	7.712205	GGCGGTTGGAGACTTAATTAACTATAA	59.288	37.037	0.00	0.00	0.00	0.98
1757	3586	7.212274	GGCGGTTGGAGACTTAATTAACTATA	58.788	38.462	0.00	0.00	0.00	1.31
1758	3587	6.053650	GGCGGTTGGAGACTTAATTAACTAT	58.946	40.000	0.00	0.00	0.00	2.12
1759	3588	5.422145	GGCGGTTGGAGACTTAATTAACTA	58.578	41.667	0.00	0.00	0.00	2.24
1760	3589	4.259356	GGCGGTTGGAGACTTAATTAACT	58.741	43.478	0.00	0.00	0.00	2.24
1792	3621	3.479269	GACACAGCCTACGTGCGC	61.479	66.667	0.00	0.00	37.93	6.09
1807	3636	3.104766	CTGCATGTGCCGATGGAC	58.895	61.111	2.07	0.00	41.18	4.02
1899	3728	2.504899	CACATGACTCGCTCGCGT	60.505	61.111	5.77	0.00	40.74	6.01
1900	3729	3.906649	GCACATGACTCGCTCGCG	61.907	66.667	0.00	0.00	41.35	5.87
1901	3730	3.558411	GGCACATGACTCGCTCGC	61.558	66.667	0.00	0.00	0.00	5.03
1902	3731	2.163390	CAGGCACATGACTCGCTCG	61.163	63.158	0.00	0.00	0.00	5.03
1906	3741	2.046988	TGGCAGGCACATGACTCG	60.047	61.111	0.00	0.00	0.00	4.18
1907	3742	2.404995	GCTGGCAGGCACATGACTC	61.405	63.158	17.64	0.00	0.00	3.36
1960	3795	3.306088	GCTTCTGCAAGTACAGGTACAGA	60.306	47.826	11.78	3.44	38.26	3.41
2010	3849	1.134068	GGGGGAAGGGAAGAAGATTCG	60.134	57.143	0.00	0.00	0.00	3.34
2011	3850	2.738587	GGGGGAAGGGAAGAAGATTC	57.261	55.000	0.00	0.00	0.00	2.52
2035	3874	3.192422	TGGGCGTTAAACAAATGAGATGG	59.808	43.478	0.00	0.00	0.00	3.51
2087	3931	3.040175	CGCTCGCATCGCATGGAT	61.040	61.111	0.00	0.00	35.09	3.41
2088	3932	4.205877	TCGCTCGCATCGCATGGA	62.206	61.111	0.00	0.00	0.00	3.41
2095	3939	4.560856	ACCTCGCTCGCTCGCATC	62.561	66.667	0.00	0.00	0.00	3.91
2099	3943	3.805307	ACAGACCTCGCTCGCTCG	61.805	66.667	0.00	0.00	0.00	5.03
2100	3944	2.202544	CACAGACCTCGCTCGCTC	60.203	66.667	0.00	0.00	0.00	5.03
2101	3945	2.673341	TCACAGACCTCGCTCGCT	60.673	61.111	0.00	0.00	0.00	4.93
2161	4008	2.014068	GCAGATTGAAAGGGGGTCTCG	61.014	57.143	0.00	0.00	0.00	4.04
2166	4013	1.325476	GCCAGCAGATTGAAAGGGGG	61.325	60.000	0.00	0.00	0.00	5.40
2235	4091	2.228138	ACAACAAAATGCTGCCACAG	57.772	45.000	0.00	0.00	34.12	3.66
2236	4092	2.687700	AACAACAAAATGCTGCCACA	57.312	40.000	0.00	0.00	0.00	4.17
2237	4093	3.197265	AGAAACAACAAAATGCTGCCAC	58.803	40.909	0.00	0.00	0.00	5.01
2238	4094	3.456280	GAGAAACAACAAAATGCTGCCA	58.544	40.909	0.00	0.00	0.00	4.92
2239	4095	2.802247	GGAGAAACAACAAAATGCTGCC	59.198	45.455	0.00	0.00	0.00	4.85
2240	4096	2.802247	GGGAGAAACAACAAAATGCTGC	59.198	45.455	0.00	0.00	0.00	5.25
2241	4097	3.070015	AGGGGAGAAACAACAAAATGCTG	59.930	43.478	0.00	0.00	0.00	4.41
2242	4098	3.308401	AGGGGAGAAACAACAAAATGCT	58.692	40.909	0.00	0.00	0.00	3.79
2243	4099	3.321968	AGAGGGGAGAAACAACAAAATGC	59.678	43.478	0.00	0.00	0.00	3.56
2244	4100	4.829492	AGAGAGGGGAGAAACAACAAAATG	59.171	41.667	0.00	0.00	0.00	2.32
2245	4101	5.066913	AGAGAGGGGAGAAACAACAAAAT	57.933	39.130	0.00	0.00	0.00	1.82
2246	4102	4.519906	AGAGAGGGGAGAAACAACAAAA	57.480	40.909	0.00	0.00	0.00	2.44
2247	4103	4.166144	AGAAGAGAGGGGAGAAACAACAAA	59.834	41.667	0.00	0.00	0.00	2.83
2248	4104	3.716872	AGAAGAGAGGGGAGAAACAACAA	59.283	43.478	0.00	0.00	0.00	2.83
2249	4105	3.071602	CAGAAGAGAGGGGAGAAACAACA	59.928	47.826	0.00	0.00	0.00	3.33
2250	4106	3.669536	CAGAAGAGAGGGGAGAAACAAC	58.330	50.000	0.00	0.00	0.00	3.32
2251	4107	2.039084	GCAGAAGAGAGGGGAGAAACAA	59.961	50.000	0.00	0.00	0.00	2.83
2252	4108	1.625818	GCAGAAGAGAGGGGAGAAACA	59.374	52.381	0.00	0.00	0.00	2.83
2253	4109	1.905894	AGCAGAAGAGAGGGGAGAAAC	59.094	52.381	0.00	0.00	0.00	2.78
2254	4110	2.334006	AGCAGAAGAGAGGGGAGAAA	57.666	50.000	0.00	0.00	0.00	2.52
2255	4111	2.183679	GAAGCAGAAGAGAGGGGAGAA	58.816	52.381	0.00	0.00	0.00	2.87
2256	4112	1.621072	GGAAGCAGAAGAGAGGGGAGA	60.621	57.143	0.00	0.00	0.00	3.71
2257	4113	0.829990	GGAAGCAGAAGAGAGGGGAG	59.170	60.000	0.00	0.00	0.00	4.30
2258	4114	0.415429	AGGAAGCAGAAGAGAGGGGA	59.585	55.000	0.00	0.00	0.00	4.81
2259	4115	0.829990	GAGGAAGCAGAAGAGAGGGG	59.170	60.000	0.00	0.00	0.00	4.79
2260	4116	0.829990	GGAGGAAGCAGAAGAGAGGG	59.170	60.000	0.00	0.00	0.00	4.30
2261	4117	1.756538	GAGGAGGAAGCAGAAGAGAGG	59.243	57.143	0.00	0.00	0.00	3.69
2262	4118	1.756538	GGAGGAGGAAGCAGAAGAGAG	59.243	57.143	0.00	0.00	0.00	3.20
2263	4119	1.621072	GGGAGGAGGAAGCAGAAGAGA	60.621	57.143	0.00	0.00	0.00	3.10
2264	4120	0.829990	GGGAGGAGGAAGCAGAAGAG	59.170	60.000	0.00	0.00	0.00	2.85
2265	4121	0.117140	TGGGAGGAGGAAGCAGAAGA	59.883	55.000	0.00	0.00	0.00	2.87
2266	4122	1.140652	GATGGGAGGAGGAAGCAGAAG	59.859	57.143	0.00	0.00	0.00	2.85
2267	4123	1.207791	GATGGGAGGAGGAAGCAGAA	58.792	55.000	0.00	0.00	0.00	3.02
2268	4124	0.341258	AGATGGGAGGAGGAAGCAGA	59.659	55.000	0.00	0.00	0.00	4.26
2269	4125	1.140652	GAAGATGGGAGGAGGAAGCAG	59.859	57.143	0.00	0.00	0.00	4.24
2270	4126	1.207791	GAAGATGGGAGGAGGAAGCA	58.792	55.000	0.00	0.00	0.00	3.91
2271	4127	1.506025	AGAAGATGGGAGGAGGAAGC	58.494	55.000	0.00	0.00	0.00	3.86
2272	4128	5.606329	AGAATAAGAAGATGGGAGGAGGAAG	59.394	44.000	0.00	0.00	0.00	3.46
2273	4129	5.542743	AGAATAAGAAGATGGGAGGAGGAA	58.457	41.667	0.00	0.00	0.00	3.36
2274	4130	5.163259	AGAATAAGAAGATGGGAGGAGGA	57.837	43.478	0.00	0.00	0.00	3.71
2275	4131	5.606329	AGAAGAATAAGAAGATGGGAGGAGG	59.394	44.000	0.00	0.00	0.00	4.30
2276	4132	6.745794	AGAAGAATAAGAAGATGGGAGGAG	57.254	41.667	0.00	0.00	0.00	3.69
2277	4133	6.100424	GGAAGAAGAATAAGAAGATGGGAGGA	59.900	42.308	0.00	0.00	0.00	3.71
2278	4134	6.101005	AGGAAGAAGAATAAGAAGATGGGAGG	59.899	42.308	0.00	0.00	0.00	4.30
2279	4135	7.135591	AGGAAGAAGAATAAGAAGATGGGAG	57.864	40.000	0.00	0.00	0.00	4.30
2280	4136	6.100424	GGAGGAAGAAGAATAAGAAGATGGGA	59.900	42.308	0.00	0.00	0.00	4.37
2281	4137	6.295249	GGAGGAAGAAGAATAAGAAGATGGG	58.705	44.000	0.00	0.00	0.00	4.00
2282	4138	6.295249	GGGAGGAAGAAGAATAAGAAGATGG	58.705	44.000	0.00	0.00	0.00	3.51
2283	4139	5.988561	CGGGAGGAAGAAGAATAAGAAGATG	59.011	44.000	0.00	0.00	0.00	2.90
2284	4140	5.454045	GCGGGAGGAAGAAGAATAAGAAGAT	60.454	44.000	0.00	0.00	0.00	2.40
2285	4141	4.141914	GCGGGAGGAAGAAGAATAAGAAGA	60.142	45.833	0.00	0.00	0.00	2.87
2286	4142	4.123506	GCGGGAGGAAGAAGAATAAGAAG	58.876	47.826	0.00	0.00	0.00	2.85
2287	4143	3.517901	TGCGGGAGGAAGAAGAATAAGAA	59.482	43.478	0.00	0.00	0.00	2.52
2288	4144	3.104512	TGCGGGAGGAAGAAGAATAAGA	58.895	45.455	0.00	0.00	0.00	2.10
2289	4145	3.118592	AGTGCGGGAGGAAGAAGAATAAG	60.119	47.826	0.00	0.00	0.00	1.73
2290	4146	2.838202	AGTGCGGGAGGAAGAAGAATAA	59.162	45.455	0.00	0.00	0.00	1.40
2291	4147	2.431057	GAGTGCGGGAGGAAGAAGAATA	59.569	50.000	0.00	0.00	0.00	1.75
2292	4148	1.208293	GAGTGCGGGAGGAAGAAGAAT	59.792	52.381	0.00	0.00	0.00	2.40
2308	4164	1.195448	GAATGGCGTCAACAGTGAGTG	59.805	52.381	0.00	0.00	33.27	3.51
2309	4165	1.070758	AGAATGGCGTCAACAGTGAGT	59.929	47.619	0.00	0.00	33.27	3.41
2320	4176	1.220206	CAGAGCAGGAGAATGGCGT	59.780	57.895	0.00	0.00	0.00	5.68
2332	4188	1.608627	TCAGAGCCTGAGCAGAGCA	60.609	57.895	11.60	0.00	43.56	4.26
2363	4288	2.066999	GGAGCGGATGGGTCTCCTT	61.067	63.158	0.00	0.00	42.31	3.36
2393	4609	2.438434	GGGTGTGGAGGGAATGCG	60.438	66.667	0.00	0.00	0.00	4.73
2396	4612	1.151587	AGTGGGGTGTGGAGGGAAT	60.152	57.895	0.00	0.00	0.00	3.01
2400	4616	2.203998	AGGAGTGGGGTGTGGAGG	60.204	66.667	0.00	0.00	0.00	4.30
2405	4621	2.930562	GGAGCAGGAGTGGGGTGT	60.931	66.667	0.00	0.00	0.00	4.16
2409	4625	0.617249	AGAAGAGGAGCAGGAGTGGG	60.617	60.000	0.00	0.00	0.00	4.61
2410	4626	1.206849	GAAGAAGAGGAGCAGGAGTGG	59.793	57.143	0.00	0.00	0.00	4.00
2411	4627	2.166254	GAGAAGAAGAGGAGCAGGAGTG	59.834	54.545	0.00	0.00	0.00	3.51
2412	4628	2.456577	GAGAAGAAGAGGAGCAGGAGT	58.543	52.381	0.00	0.00	0.00	3.85
2413	4629	1.756538	GGAGAAGAAGAGGAGCAGGAG	59.243	57.143	0.00	0.00	0.00	3.69
2415	4631	0.829990	GGGAGAAGAAGAGGAGCAGG	59.170	60.000	0.00	0.00	0.00	4.85
2416	4632	0.459489	CGGGAGAAGAAGAGGAGCAG	59.541	60.000	0.00	0.00	0.00	4.24
2418	4634	1.142965	GCGGGAGAAGAAGAGGAGC	59.857	63.158	0.00	0.00	0.00	4.70
2419	4635	1.819905	GGCGGGAGAAGAAGAGGAG	59.180	63.158	0.00	0.00	0.00	3.69
2420	4636	2.052690	CGGCGGGAGAAGAAGAGGA	61.053	63.158	0.00	0.00	0.00	3.71
2421	4637	2.286127	GACGGCGGGAGAAGAAGAGG	62.286	65.000	13.24	0.00	0.00	3.69
2422	4638	1.139947	GACGGCGGGAGAAGAAGAG	59.860	63.158	13.24	0.00	0.00	2.85
2455	4679	3.799281	CCTATATCTAGGCTGCTGCTC	57.201	52.381	15.64	5.79	38.29	4.26
2497	4724	1.188219	TCTCTGGCCCTGTGTCTGTC	61.188	60.000	0.00	0.00	0.00	3.51
2500	4727	0.614415	CTCTCTCTGGCCCTGTGTCT	60.614	60.000	0.00	0.00	0.00	3.41
2503	4730	0.979665	TTTCTCTCTCTGGCCCTGTG	59.020	55.000	0.00	0.00	0.00	3.66
2505	4732	1.206849	GTCTTTCTCTCTCTGGCCCTG	59.793	57.143	0.00	0.00	0.00	4.45
2506	4733	1.567357	GTCTTTCTCTCTCTGGCCCT	58.433	55.000	0.00	0.00	0.00	5.19
2507	4734	0.539518	GGTCTTTCTCTCTCTGGCCC	59.460	60.000	0.00	0.00	0.00	5.80
2508	4735	1.270907	TGGTCTTTCTCTCTCTGGCC	58.729	55.000	0.00	0.00	0.00	5.36
2509	4736	2.354604	CCTTGGTCTTTCTCTCTCTGGC	60.355	54.545	0.00	0.00	0.00	4.85
2510	4737	2.235898	CCCTTGGTCTTTCTCTCTCTGG	59.764	54.545	0.00	0.00	0.00	3.86
2511	4738	2.235898	CCCCTTGGTCTTTCTCTCTCTG	59.764	54.545	0.00	0.00	0.00	3.35
2512	4739	2.545810	CCCCTTGGTCTTTCTCTCTCT	58.454	52.381	0.00	0.00	0.00	3.10
2538	4765	1.696336	GGAGGAGGAGCAGCAATATGA	59.304	52.381	0.00	0.00	0.00	2.15
2539	4766	1.419012	TGGAGGAGGAGCAGCAATATG	59.581	52.381	0.00	0.00	0.00	1.78
2553	4784	1.415126	GGGGATGGAGATCTTGGAGGA	60.415	57.143	0.00	0.00	0.00	3.71
2568	4799	2.073101	GGGGAGCTCGAAAGGGGAT	61.073	63.158	7.83	0.00	0.00	3.85
2593	4849	1.610673	GCTCACCAGTCAGGGAGGA	60.611	63.158	0.00	0.00	43.89	3.71
2633	4889	1.133009	GCCTCCTATTCCTCTCCCAGA	60.133	57.143	0.00	0.00	0.00	3.86
2657	4913	1.515521	CCAAGACCAAGACCAACGCC	61.516	60.000	0.00	0.00	0.00	5.68
2659	4915	1.675552	AACCAAGACCAAGACCAACG	58.324	50.000	0.00	0.00	0.00	4.10
2660	4916	2.032924	CGAAACCAAGACCAAGACCAAC	59.967	50.000	0.00	0.00	0.00	3.77
2662	4918	1.961793	CGAAACCAAGACCAAGACCA	58.038	50.000	0.00	0.00	0.00	4.02
2663	4919	0.591659	GCGAAACCAAGACCAAGACC	59.408	55.000	0.00	0.00	0.00	3.85
2665	4921	1.872237	CGAGCGAAACCAAGACCAAGA	60.872	52.381	0.00	0.00	0.00	3.02
2666	4922	0.512952	CGAGCGAAACCAAGACCAAG	59.487	55.000	0.00	0.00	0.00	3.61
2668	4924	1.959226	GCGAGCGAAACCAAGACCA	60.959	57.895	0.00	0.00	0.00	4.02
2695	4962	0.110486	TTCTTGGTCCCACTTCCTGC	59.890	55.000	0.00	0.00	0.00	4.85
2696	4963	1.699634	TCTTCTTGGTCCCACTTCCTG	59.300	52.381	0.00	0.00	0.00	3.86
2708	4975	2.343426	GCCCCCGCTTTCTTCTTGG	61.343	63.158	0.00	0.00	0.00	3.61
2920	5235	4.040461	TGTTTGGTGTTTGGTGAAAAAGGA	59.960	37.500	0.00	0.00	0.00	3.36
2962	5277	3.189910	GGGGTCCGTTTGAGTTGTTATTC	59.810	47.826	0.00	0.00	0.00	1.75
3016	5339	7.729116	TCGTTCCCTTTTCTAGAAGAAAGTAA	58.271	34.615	13.41	6.88	44.14	2.24
3059	5382	6.776603	ACACAGTACAGTACTAGGAAAAGAGT	59.223	38.462	13.12	1.20	37.23	3.24
3061	5384	6.548622	ACACACAGTACAGTACTAGGAAAAGA	59.451	38.462	13.12	0.00	37.23	2.52
3088	5418	0.309302	TGTTTGGAATTCGGTGTGCG	59.691	50.000	0.00	0.00	0.00	5.34
3112	5443	1.471327	GCCTGCACAACTTTTTGCTCA	60.471	47.619	2.07	0.00	39.62	4.26
3118	5449	0.100503	GTCGTGCCTGCACAACTTTT	59.899	50.000	21.01	0.00	46.47	2.27
3130	5461	0.745845	AATCATGCAGAGGTCGTGCC	60.746	55.000	0.00	0.00	40.43	5.01
3131	5462	0.654683	GAATCATGCAGAGGTCGTGC	59.345	55.000	0.00	0.00	41.59	5.34
3132	5463	1.293924	GGAATCATGCAGAGGTCGTG	58.706	55.000	0.00	0.00	0.00	4.35
3133	5464	0.904649	TGGAATCATGCAGAGGTCGT	59.095	50.000	0.00	0.00	0.00	4.34
3134	5465	1.134580	AGTGGAATCATGCAGAGGTCG	60.135	52.381	0.00	0.00	0.00	4.79
3135	5466	2.170187	AGAGTGGAATCATGCAGAGGTC	59.830	50.000	0.00	0.00	0.00	3.85
3175	5506	9.744468	AATTTTCATTCAGTAACAAGGTTGTAC	57.256	29.630	0.00	0.00	41.31	2.90
3176	5507	9.959749	GAATTTTCATTCAGTAACAAGGTTGTA	57.040	29.630	0.00	0.00	38.61	2.41
3214	5545	7.453393	AGGAACTCAGTGATAATGAACAAGAA	58.547	34.615	0.00	0.00	0.00	2.52
3216	5547	7.010923	GCTAGGAACTCAGTGATAATGAACAAG	59.989	40.741	0.00	0.00	41.75	3.16
3217	5548	6.818644	GCTAGGAACTCAGTGATAATGAACAA	59.181	38.462	0.00	0.00	41.75	2.83
3218	5549	6.070824	TGCTAGGAACTCAGTGATAATGAACA	60.071	38.462	0.00	0.00	41.75	3.18
3219	5550	6.256757	GTGCTAGGAACTCAGTGATAATGAAC	59.743	42.308	0.00	0.00	41.75	3.18
3220	5551	6.341316	GTGCTAGGAACTCAGTGATAATGAA	58.659	40.000	0.00	0.00	41.75	2.57
3221	5552	5.163405	GGTGCTAGGAACTCAGTGATAATGA	60.163	44.000	0.00	0.00	41.75	2.57
3234	5565	0.245539	TGCAGTACGGTGCTAGGAAC	59.754	55.000	8.39	0.00	44.32	3.62
3239	5570	1.518352	CGCATGCAGTACGGTGCTA	60.518	57.895	19.57	0.00	44.32	3.49
3251	5582	1.936436	TTGGGATTCAGTGCGCATGC	61.936	55.000	15.91	7.91	43.20	4.06
3252	5583	0.527113	TTTGGGATTCAGTGCGCATG	59.473	50.000	15.91	13.39	0.00	4.06
3255	5586	0.527565	ATGTTTGGGATTCAGTGCGC	59.472	50.000	0.00	0.00	0.00	6.09
3264	5595	3.804036	TCGAGCGATTTATGTTTGGGAT	58.196	40.909	0.00	0.00	0.00	3.85
3266	5597	4.552166	AATCGAGCGATTTATGTTTGGG	57.448	40.909	11.94	0.00	41.55	4.12
3311	5643	1.467342	GAACACCGTGAATTAGCCCAC	59.533	52.381	5.28	0.00	0.00	4.61
3315	5647	3.810373	CACAAGAACACCGTGAATTAGC	58.190	45.455	5.28	0.00	32.23	3.09
3324	5656	1.939934	TGAAGAAGCACAAGAACACCG	59.060	47.619	0.00	0.00	0.00	4.94
3327	5659	2.945008	CCACTGAAGAAGCACAAGAACA	59.055	45.455	0.00	0.00	0.00	3.18
3440	5772	6.037391	GGCATTCAGAGAAGAGAAATGAGAAG	59.963	42.308	0.00	0.00	0.00	2.85
3465	5797	5.807011	GCAAACCATTAGCTAACATTTCAGG	59.193	40.000	8.70	5.15	0.00	3.86
3613	5947	1.419387	ACTGCTCAGCCTCTTCTTTGT	59.581	47.619	0.00	0.00	0.00	2.83
3620	5954	1.207570	CTCAATGACTGCTCAGCCTCT	59.792	52.381	0.00	0.00	0.00	3.69
3625	5959	1.085091	GGTGCTCAATGACTGCTCAG	58.915	55.000	0.00	0.00	0.00	3.35
3626	5960	0.671472	CGGTGCTCAATGACTGCTCA	60.671	55.000	0.00	0.00	0.00	4.26
3630	5964	0.671472	TGCTCGGTGCTCAATGACTG	60.671	55.000	3.53	0.00	43.37	3.51
3652	5986	3.807631	TTGCGCTTGCGAGTCAGGT	62.808	57.895	19.55	0.00	43.34	4.00
3689	6026	1.747924	CTCCTGAGAGAACGATGCAGA	59.252	52.381	0.00	0.00	43.39	4.26
3957	6299	4.772100	GGTTAATCCACATGATAATGGGGG	59.228	45.833	11.81	4.17	45.13	5.40
3979	6321	2.836479	ACAAACGAAGGTGAAAACGG	57.164	45.000	0.00	0.00	0.00	4.44
4042	6385	0.539438	TGGACCTGCCAACATCCAAC	60.539	55.000	0.00	0.00	45.87	3.77
4166	6509	5.212194	GCAGATGTGTTTCAACGTTGTATT	58.788	37.500	26.47	7.17	0.00	1.89
4173	6516	2.661504	TTCGCAGATGTGTTTCAACG	57.338	45.000	0.00	0.00	35.04	4.10
4189	6532	4.795278	GCATCATACTGAAAAAGGCTTTCG	59.205	41.667	13.76	5.12	0.00	3.46
4190	6533	5.713025	TGCATCATACTGAAAAAGGCTTTC	58.287	37.500	13.76	2.15	0.00	2.62
4191	6534	5.726980	TGCATCATACTGAAAAAGGCTTT	57.273	34.783	6.68	6.68	0.00	3.51
4192	6535	5.726980	TTGCATCATACTGAAAAAGGCTT	57.273	34.783	0.00	0.00	0.00	4.35
4193	6536	5.477984	TCTTTGCATCATACTGAAAAAGGCT	59.522	36.000	0.00	0.00	31.72	4.58
4194	6537	5.713025	TCTTTGCATCATACTGAAAAAGGC	58.287	37.500	0.00	0.00	31.72	4.35
4195	6538	7.596494	TCTTCTTTGCATCATACTGAAAAAGG	58.404	34.615	0.00	0.00	31.72	3.11
4199	6542	9.399797	ACATATCTTCTTTGCATCATACTGAAA	57.600	29.630	0.00	0.00	0.00	2.69
4200	6543	8.833493	CACATATCTTCTTTGCATCATACTGAA	58.167	33.333	0.00	0.00	0.00	3.02
4201	6544	8.206189	TCACATATCTTCTTTGCATCATACTGA	58.794	33.333	0.00	0.00	0.00	3.41
4202	6545	8.374327	TCACATATCTTCTTTGCATCATACTG	57.626	34.615	0.00	0.00	0.00	2.74
4203	6546	7.172875	GCTCACATATCTTCTTTGCATCATACT	59.827	37.037	0.00	0.00	0.00	2.12
4204	6547	7.172875	AGCTCACATATCTTCTTTGCATCATAC	59.827	37.037	0.00	0.00	0.00	2.39
4205	6548	7.222161	AGCTCACATATCTTCTTTGCATCATA	58.778	34.615	0.00	0.00	0.00	2.15
4222	6565	6.072783	GCTTTCTCACTTTTAGAAGCTCACAT	60.073	38.462	0.00	0.00	36.29	3.21
4238	6581	8.854312	GCTTCTGTTTAAATTATGCTTTCTCAC	58.146	33.333	0.00	0.00	0.00	3.51
4240	6583	8.970691	TGCTTCTGTTTAAATTATGCTTTCTC	57.029	30.769	0.00	0.00	0.00	2.87
4270	6613	6.816134	TGCTTCTGTTAAGTTATGCATTCA	57.184	33.333	3.54	0.00	0.00	2.57
4279	6622	5.049405	CGTCCTCAATTGCTTCTGTTAAGTT	60.049	40.000	0.00	0.00	0.00	2.66
4433	6776	6.368516	AGGAATTAACATGGTTGCAAAATTCG	59.631	34.615	17.70	4.27	33.57	3.34
4546	6890	7.148205	ACAGAAGTAAAACAACGGTGTATTTGT	60.148	33.333	6.49	0.59	36.80	2.83
4648	6992	4.042809	TCAGGCAAATTAGAAGAGGAACCA	59.957	41.667	0.00	0.00	0.00	3.67
4846	7191	5.570320	AGTGGTGCCTATAACAGTGAAATT	58.430	37.500	0.00	0.00	0.00	1.82
4862	7207	5.215160	CACAACAAGAATCTTAAGTGGTGC	58.785	41.667	7.71	0.00	29.77	5.01
4886	7231	4.853924	AGGAAGCAAAACTGTACAATGG	57.146	40.909	0.00	0.00	0.00	3.16
4891	7236	3.315191	TGAGCAAGGAAGCAAAACTGTAC	59.685	43.478	0.00	0.00	36.85	2.90
4911	7256	5.298026	TCGAACAACAGATTGACCAAATTGA	59.702	36.000	0.00	0.00	39.30	2.57
4965	7310	9.381038	GCCCAGGATATCTATCTTACCATTATA	57.619	37.037	2.05	0.00	33.28	0.98
4981	7326	2.138535	TCCAAGATGGCCCAGGATAT	57.861	50.000	0.00	0.00	37.47	1.63
5006	7351	4.774726	AGTCTGCCCGATAGATACATCATT	59.225	41.667	0.00	0.00	39.76	2.57
5046	7393	6.648725	GCCTTTCTCATAAGGTATAAGCTCAG	59.351	42.308	0.00	0.00	45.34	3.35
5161	7509	4.801891	TCATGTAAGTGTGGAAGTCGTAC	58.198	43.478	0.00	0.00	0.00	3.67
5575	7951	4.460382	GGAGCATTTGAATCCAGTTGAGAA	59.540	41.667	0.00	0.00	33.08	2.87
5744	8120	5.180868	CCTGGAAGAGAACAAAGTGAATCAG	59.819	44.000	0.00	0.00	34.07	2.90
5752	8128	7.379098	GGTAATTACCTGGAAGAGAACAAAG	57.621	40.000	24.79	0.00	43.10	2.77
5798	8180	3.756117	GAACCAGAGGGAGTGTCATTTT	58.244	45.455	0.00	0.00	38.05	1.82
5857	8269	7.293018	GCATTCTGCAGAAATTTTTAAACCAG	58.707	34.615	31.55	9.94	44.26	4.00
5956	8368	3.252215	TGCCACTTGTAACTGAATTTCCG	59.748	43.478	0.00	0.00	0.00	4.30
5970	8382	3.411446	TGTTAACTCCTCATGCCACTTG	58.589	45.455	7.22	0.00	0.00	3.16
5997	8409	2.020694	GCCACTGCAGCACAAGGATAT	61.021	52.381	15.27	0.00	37.47	1.63
6091	8507	8.117988	CGAGAAACTAAGTAGTAGCTTCTACAG	58.882	40.741	26.42	19.50	42.68	2.74
6233	8654	9.474920	CATGTGAATAAACAAATTGTTACCTGT	57.525	29.630	12.11	0.00	40.14	4.00
6260	8681	5.742546	ACATTAAAATGTTGCTGTGGCATGT	60.743	36.000	2.47	0.00	46.95	3.21
6263	8684	4.333913	ACATTAAAATGTTGCTGTGGCA	57.666	36.364	2.47	0.00	46.95	4.92
6293	8714	7.792364	ATGCATAATGGGATCTTGATGATTT	57.208	32.000	0.00	0.00	35.14	2.17
6506	8940	1.826096	TCCGTACGAATGGTGGAATCA	59.174	47.619	18.76	0.00	33.06	2.57
6536	8970	1.583495	CGTAGTCGAGGGAGCACACA	61.583	60.000	0.00	0.00	39.71	3.72
6923	9360	5.995897	AGTAACACAAATAAGTCCAGTGTCC	59.004	40.000	0.00	0.00	42.08	4.02
6924	9361	6.482308	ACAGTAACACAAATAAGTCCAGTGTC	59.518	38.462	0.00	0.00	42.08	3.67
6925	9362	6.354130	ACAGTAACACAAATAAGTCCAGTGT	58.646	36.000	0.00	0.00	44.53	3.55
7328	9766	0.178953	AAAATGTCAGGGCAGCAGGT	60.179	50.000	0.00	0.00	0.00	4.00
7362	9800	4.245660	AGATGTTCGATCGCTCAAGAAAA	58.754	39.130	11.09	0.00	0.00	2.29
7492	9930	4.380531	CGCAGGGTGTAGAACATTATGAT	58.619	43.478	0.00	0.00	0.00	2.45
7558	9996	3.954258	GCAGGCTACCACCATAATTTTCT	59.046	43.478	0.00	0.00	0.00	2.52
7559	9997	3.699038	TGCAGGCTACCACCATAATTTTC	59.301	43.478	0.00	0.00	0.00	2.29
7572	10270	0.036875	AACACTCCCTTGCAGGCTAC	59.963	55.000	0.00	0.00	32.73	3.58
7798	10496	9.582431	CCGTATTTAGACAAATCTAAGACAAGA	57.418	33.333	9.81	0.00	45.93	3.02
7820	10518	9.450807	GCTAAAACGTAACTAGATAAATCCGTA	57.549	33.333	0.00	0.00	0.00	4.02
7821	10519	7.166473	CGCTAAAACGTAACTAGATAAATCCGT	59.834	37.037	0.00	0.00	0.00	4.69
7822	10520	7.166473	ACGCTAAAACGTAACTAGATAAATCCG	59.834	37.037	0.00	0.00	46.19	4.18
7823	10521	8.345224	ACGCTAAAACGTAACTAGATAAATCC	57.655	34.615	0.00	0.00	46.19	3.01
7838	10536	5.383984	TGCATGTATCTAACGCTAAAACG	57.616	39.130	0.00	0.00	39.50	3.60
7839	10537	6.192360	CCTTGCATGTATCTAACGCTAAAAC	58.808	40.000	0.00	0.00	0.00	2.43
7840	10538	5.295787	CCCTTGCATGTATCTAACGCTAAAA	59.704	40.000	0.00	0.00	0.00	1.52
7841	10539	4.814234	CCCTTGCATGTATCTAACGCTAAA	59.186	41.667	0.00	0.00	0.00	1.85
7842	10540	4.141801	ACCCTTGCATGTATCTAACGCTAA	60.142	41.667	0.00	0.00	0.00	3.09
7843	10541	3.386726	ACCCTTGCATGTATCTAACGCTA	59.613	43.478	0.00	0.00	0.00	4.26
7844	10542	2.170607	ACCCTTGCATGTATCTAACGCT	59.829	45.455	0.00	0.00	0.00	5.07
7845	10543	2.544267	GACCCTTGCATGTATCTAACGC	59.456	50.000	0.00	0.00	0.00	4.84
7846	10544	3.792401	TGACCCTTGCATGTATCTAACG	58.208	45.455	0.00	0.00	0.00	3.18
7847	10545	6.699575	AAATGACCCTTGCATGTATCTAAC	57.300	37.500	0.00	0.00	0.00	2.34
7848	10546	6.889177	TCAAAATGACCCTTGCATGTATCTAA	59.111	34.615	0.00	0.00	0.00	2.10
7849	10547	6.422333	TCAAAATGACCCTTGCATGTATCTA	58.578	36.000	0.00	0.00	0.00	1.98
7850	10548	5.263599	TCAAAATGACCCTTGCATGTATCT	58.736	37.500	0.00	0.00	0.00	1.98
7851	10549	5.581126	TCAAAATGACCCTTGCATGTATC	57.419	39.130	0.00	0.00	0.00	2.24

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.