Multiple sequence alignment - TraesCS2D01G564800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G564800 chr2D 100.000 3225 0 0 1 3225 635094797 635091573 0.000000e+00 5956
1 TraesCS2D01G564800 chr2B 93.477 2729 107 34 1 2679 779103549 779100842 0.000000e+00 3988
2 TraesCS2D01G564800 chr2B 80.632 253 22 9 2801 3047 779101258 779101027 1.540000e-38 171
3 TraesCS2D01G564800 chr2A 92.526 2328 120 29 1 2290 778018826 778021137 0.000000e+00 3286
4 TraesCS2D01G564800 chr2A 88.434 415 31 3 2308 2722 778021122 778021519 4.840000e-133 484
5 TraesCS2D01G564800 chr2A 83.088 136 15 5 3070 3203 778021292 778021421 2.030000e-22 117


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G564800 chr2D 635091573 635094797 3224 True 5956.000000 5956 100.0000 1 3225 1 chr2D.!!$R1 3224
1 TraesCS2D01G564800 chr2B 779100842 779103549 2707 True 2079.500000 3988 87.0545 1 3047 2 chr2B.!!$R1 3046
2 TraesCS2D01G564800 chr2A 778018826 778021519 2693 False 1295.666667 3286 88.0160 1 3203 3 chr2A.!!$F1 3202

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
451 479 0.110373 CTTTTCTACAACGGTGGCGC 60.11 55.0 4.97 0.0 0.00 6.53 F
863 904 0.329596 GGCAAACCACCATCTCCTCT 59.67 55.0 0.00 0.0 35.26 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2064 2133 0.322277 CTGAATCTGCAGCCTGTGGT 60.322 55.0 9.47 0.0 0.0 4.16 R
2526 2598 0.032815 TCGACATCAAGAACGCCACA 59.967 50.0 0.00 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 88 5.683876 TCAAGGAGGAGTCTTTGGATTAG 57.316 43.478 0.00 0.00 39.64 1.73
90 106 6.480763 TGGATTAGCACACCTTTTCTATTCA 58.519 36.000 0.00 0.00 0.00 2.57
185 209 1.865865 GATGTCGTGGTAATGGCGAT 58.134 50.000 0.00 0.00 37.00 4.58
209 233 1.724623 TCGAGCCGAAAACAAGAATCG 59.275 47.619 0.00 0.00 36.39 3.34
278 302 0.757188 CAGATAGGGCCGACAGAGGT 60.757 60.000 0.00 0.00 0.00 3.85
288 312 1.423395 CGACAGAGGTGAAGCAAGTC 58.577 55.000 0.00 0.00 0.00 3.01
451 479 0.110373 CTTTTCTACAACGGTGGCGC 60.110 55.000 4.97 0.00 0.00 6.53
472 500 3.439825 GCGGGAGAAAAATTTACCGGTAA 59.560 43.478 23.17 23.17 41.46 2.85
527 555 9.435688 GCACTCCCTTTTGTTTATTTATTTCAT 57.564 29.630 0.00 0.00 0.00 2.57
600 629 8.700439 TCTGTTTGTTTTAGGCCTATAAGTTT 57.300 30.769 14.74 0.00 0.00 2.66
601 630 8.789762 TCTGTTTGTTTTAGGCCTATAAGTTTC 58.210 33.333 14.74 3.97 0.00 2.78
735 769 2.202566 GCTGTTAAGGCCTATCACGAC 58.797 52.381 5.16 0.00 0.00 4.34
857 892 4.114997 CGCCGGCAAACCACCATC 62.115 66.667 28.98 0.00 34.57 3.51
863 904 0.329596 GGCAAACCACCATCTCCTCT 59.670 55.000 0.00 0.00 35.26 3.69
1278 1327 2.047844 CGCAGCTACAGCCACAGT 60.048 61.111 0.00 0.00 43.38 3.55
1478 1533 2.777692 ACGAGGTGATACCCATTTCCAT 59.222 45.455 0.00 0.00 39.75 3.41
1532 1596 2.505118 GCTCGCCGTGTCTCTGAC 60.505 66.667 0.00 0.00 0.00 3.51
1746 1815 3.197790 GCACCATGAGATGCGCGT 61.198 61.111 8.43 0.00 30.97 6.01
1924 1993 1.220206 CTCTGCCATCTTCCGCTGT 59.780 57.895 0.00 0.00 0.00 4.40
2226 2295 0.323629 GTGGTGGCTGGTAACTAGCA 59.676 55.000 8.73 0.00 40.90 3.49
2262 2331 0.790207 CTGGACCGTCATTGTCGTTG 59.210 55.000 0.00 0.00 33.46 4.10
2280 2349 1.246649 TGTGGTTGCAGCATTACCTG 58.753 50.000 15.89 0.00 35.93 4.00
2377 2446 3.737266 TGTTGGTGAATTCGTTAGTCGTC 59.263 43.478 0.04 0.00 40.80 4.20
2482 2552 2.243221 CTGAGGAGGGTGAATTGGGATT 59.757 50.000 0.00 0.00 0.00 3.01
2497 2567 2.633967 TGGGATTTGCTGAATTTGCTGT 59.366 40.909 6.07 0.00 0.00 4.40
2526 2598 4.686191 TTGTTTTGGTGCATTTCTGGAT 57.314 36.364 0.00 0.00 0.00 3.41
2533 2605 0.608856 TGCATTTCTGGATGTGGCGT 60.609 50.000 0.00 0.00 0.00 5.68
2567 2639 2.637025 CGTGAACGCTTTGGGTGG 59.363 61.111 0.00 0.00 0.00 4.61
2612 2684 2.092882 GTTGCTGTCTACCGGTCGC 61.093 63.158 12.40 8.12 0.00 5.19
2632 2704 6.035758 GGTCGCGAGTTCATTAGTTTATTCTT 59.964 38.462 10.24 0.00 0.00 2.52
2633 2705 7.111768 GTCGCGAGTTCATTAGTTTATTCTTC 58.888 38.462 10.24 0.00 0.00 2.87
2634 2706 7.009357 GTCGCGAGTTCATTAGTTTATTCTTCT 59.991 37.037 10.24 0.00 0.00 2.85
2635 2707 8.186163 TCGCGAGTTCATTAGTTTATTCTTCTA 58.814 33.333 3.71 0.00 0.00 2.10
2662 2734 2.040278 AGTTTTCAGATGGTGCCTGCTA 59.960 45.455 0.00 0.00 0.00 3.49
2676 2748 5.178797 GTGCCTGCTAGAGTTTATTCTTCA 58.821 41.667 0.00 0.00 0.00 3.02
2679 2751 5.877564 GCCTGCTAGAGTTTATTCTTCAAGT 59.122 40.000 0.00 0.00 0.00 3.16
2695 2767 0.745845 AAGTAGCTGCTGAATGCCGG 60.746 55.000 13.43 0.00 42.00 6.13
2708 2780 1.762708 ATGCCGGGGTAAACTGAATG 58.237 50.000 2.18 0.00 0.00 2.67
2709 2781 0.402504 TGCCGGGGTAAACTGAATGT 59.597 50.000 2.18 0.00 0.00 2.71
2715 2787 5.130350 CCGGGGTAAACTGAATGTCATATT 58.870 41.667 0.00 0.00 0.00 1.28
2718 2790 6.273071 GGGGTAAACTGAATGTCATATTTGC 58.727 40.000 0.00 0.00 0.00 3.68
2722 2794 7.698130 GGTAAACTGAATGTCATATTTGCTGAC 59.302 37.037 0.00 0.00 42.68 3.51
2723 2795 7.458409 AAACTGAATGTCATATTTGCTGACT 57.542 32.000 4.86 0.00 42.78 3.41
2724 2796 6.432607 ACTGAATGTCATATTTGCTGACTG 57.567 37.500 4.86 0.00 42.78 3.51
2725 2797 5.163683 ACTGAATGTCATATTTGCTGACTGC 60.164 40.000 4.86 0.00 42.78 4.40
2726 2798 4.945543 TGAATGTCATATTTGCTGACTGCT 59.054 37.500 5.87 0.00 42.78 4.24
2727 2799 5.065602 TGAATGTCATATTTGCTGACTGCTC 59.934 40.000 5.87 0.63 42.78 4.26
2728 2800 4.212143 TGTCATATTTGCTGACTGCTCT 57.788 40.909 5.87 0.00 42.78 4.09
2729 2801 3.937079 TGTCATATTTGCTGACTGCTCTG 59.063 43.478 5.87 0.00 42.78 3.35
2730 2802 3.937706 GTCATATTTGCTGACTGCTCTGT 59.062 43.478 5.87 0.00 43.37 3.41
2731 2803 5.111989 GTCATATTTGCTGACTGCTCTGTA 58.888 41.667 5.87 0.00 43.37 2.74
2732 2804 5.757320 GTCATATTTGCTGACTGCTCTGTAT 59.243 40.000 5.87 0.00 43.37 2.29
2733 2805 6.259608 GTCATATTTGCTGACTGCTCTGTATT 59.740 38.462 5.87 0.00 43.37 1.89
2734 2806 6.481313 TCATATTTGCTGACTGCTCTGTATTC 59.519 38.462 5.87 0.00 43.37 1.75
2735 2807 2.680312 TGCTGACTGCTCTGTATTCC 57.320 50.000 5.87 0.00 43.37 3.01
2736 2808 1.134995 TGCTGACTGCTCTGTATTCCG 60.135 52.381 5.87 0.00 43.37 4.30
2737 2809 1.134965 GCTGACTGCTCTGTATTCCGT 60.135 52.381 0.00 0.00 38.95 4.69
2738 2810 2.534298 CTGACTGCTCTGTATTCCGTG 58.466 52.381 0.00 0.00 0.00 4.94
2739 2811 1.204704 TGACTGCTCTGTATTCCGTGG 59.795 52.381 0.00 0.00 0.00 4.94
2740 2812 0.537188 ACTGCTCTGTATTCCGTGGG 59.463 55.000 0.00 0.00 0.00 4.61
2741 2813 0.537188 CTGCTCTGTATTCCGTGGGT 59.463 55.000 0.00 0.00 0.00 4.51
2742 2814 0.981183 TGCTCTGTATTCCGTGGGTT 59.019 50.000 0.00 0.00 0.00 4.11
2743 2815 1.349688 TGCTCTGTATTCCGTGGGTTT 59.650 47.619 0.00 0.00 0.00 3.27
2744 2816 2.224670 TGCTCTGTATTCCGTGGGTTTT 60.225 45.455 0.00 0.00 0.00 2.43
2745 2817 2.418976 GCTCTGTATTCCGTGGGTTTTC 59.581 50.000 0.00 0.00 0.00 2.29
2746 2818 3.007635 CTCTGTATTCCGTGGGTTTTCC 58.992 50.000 0.00 0.00 39.75 3.13
2747 2819 2.372504 TCTGTATTCCGTGGGTTTTCCA 59.627 45.455 0.00 0.00 44.79 3.53
2759 2831 4.701765 TGGGTTTTCCAATGACATTTGTG 58.298 39.130 0.00 0.00 43.84 3.33
2760 2832 4.163078 TGGGTTTTCCAATGACATTTGTGT 59.837 37.500 0.00 0.00 43.84 3.72
2761 2833 4.749598 GGGTTTTCCAATGACATTTGTGTC 59.250 41.667 0.00 1.76 42.91 3.67
2762 2834 4.444056 GGTTTTCCAATGACATTTGTGTCG 59.556 41.667 0.00 0.00 39.57 4.35
2763 2835 4.909696 TTTCCAATGACATTTGTGTCGT 57.090 36.364 0.00 1.17 41.43 4.34
2764 2836 4.481930 TTCCAATGACATTTGTGTCGTC 57.518 40.909 0.00 0.00 41.43 4.20
2765 2837 3.471680 TCCAATGACATTTGTGTCGTCA 58.528 40.909 0.00 0.00 43.35 4.35
2767 2839 4.154015 TCCAATGACATTTGTGTCGTCATC 59.846 41.667 0.00 0.00 46.85 2.92
2768 2840 3.997319 ATGACATTTGTGTCGTCATCG 57.003 42.857 0.00 0.00 44.96 3.84
2769 2841 2.065512 TGACATTTGTGTCGTCATCGG 58.934 47.619 4.34 0.00 41.43 4.18
2770 2842 2.288518 TGACATTTGTGTCGTCATCGGA 60.289 45.455 4.34 0.00 41.43 4.55
2771 2843 2.066262 ACATTTGTGTCGTCATCGGAC 58.934 47.619 0.00 0.00 40.77 4.79
2772 2844 1.393539 CATTTGTGTCGTCATCGGACC 59.606 52.381 0.00 0.00 41.13 4.46
2773 2845 0.665068 TTTGTGTCGTCATCGGACCG 60.665 55.000 7.84 7.84 41.13 4.79
2774 2846 1.798234 TTGTGTCGTCATCGGACCGT 61.798 55.000 14.79 0.00 41.13 4.83
2775 2847 1.080974 GTGTCGTCATCGGACCGTT 60.081 57.895 14.79 1.91 41.13 4.44
2776 2848 0.168788 GTGTCGTCATCGGACCGTTA 59.831 55.000 14.79 0.00 41.13 3.18
2777 2849 1.097232 TGTCGTCATCGGACCGTTAT 58.903 50.000 14.79 0.00 41.13 1.89
2778 2850 1.202211 TGTCGTCATCGGACCGTTATG 60.202 52.381 14.79 11.40 41.13 1.90
2779 2851 0.382873 TCGTCATCGGACCGTTATGG 59.617 55.000 14.79 2.32 41.13 2.74
2780 2852 0.382873 CGTCATCGGACCGTTATGGA 59.617 55.000 14.79 2.89 41.13 3.41
2781 2853 1.849097 GTCATCGGACCGTTATGGAC 58.151 55.000 14.79 11.26 42.00 4.02
2782 2854 1.407979 GTCATCGGACCGTTATGGACT 59.592 52.381 14.79 0.00 42.00 3.85
2783 2855 1.407618 TCATCGGACCGTTATGGACTG 59.592 52.381 14.79 0.00 42.00 3.51
2784 2856 1.136305 CATCGGACCGTTATGGACTGT 59.864 52.381 14.79 0.00 42.00 3.55
2785 2857 0.813184 TCGGACCGTTATGGACTGTC 59.187 55.000 14.79 0.00 42.00 3.51
2786 2858 0.528924 CGGACCGTTATGGACTGTCA 59.471 55.000 5.48 0.00 42.35 3.58
2787 2859 1.136305 CGGACCGTTATGGACTGTCAT 59.864 52.381 5.48 4.32 42.35 3.06
2788 2860 2.418197 CGGACCGTTATGGACTGTCATT 60.418 50.000 5.48 0.00 42.35 2.57
2789 2861 2.936498 GGACCGTTATGGACTGTCATTG 59.064 50.000 10.38 0.00 42.35 2.82
2790 2862 3.596214 GACCGTTATGGACTGTCATTGT 58.404 45.455 10.38 0.00 40.84 2.71
2791 2863 4.000988 GACCGTTATGGACTGTCATTGTT 58.999 43.478 10.38 0.00 40.84 2.83
2792 2864 3.751175 ACCGTTATGGACTGTCATTGTTG 59.249 43.478 10.38 0.00 42.00 3.33
2793 2865 3.751175 CCGTTATGGACTGTCATTGTTGT 59.249 43.478 10.38 0.00 42.00 3.32
2794 2866 4.215399 CCGTTATGGACTGTCATTGTTGTT 59.785 41.667 10.38 0.00 42.00 2.83
2795 2867 5.278266 CCGTTATGGACTGTCATTGTTGTTT 60.278 40.000 10.38 0.00 42.00 2.83
2796 2868 6.072948 CCGTTATGGACTGTCATTGTTGTTTA 60.073 38.462 10.38 0.00 42.00 2.01
2797 2869 6.795114 CGTTATGGACTGTCATTGTTGTTTAC 59.205 38.462 10.38 0.00 0.00 2.01
2798 2870 7.307751 CGTTATGGACTGTCATTGTTGTTTACT 60.308 37.037 10.38 0.00 0.00 2.24
2799 2871 6.959639 ATGGACTGTCATTGTTGTTTACTT 57.040 33.333 10.38 0.00 0.00 2.24
2800 2872 6.130298 TGGACTGTCATTGTTGTTTACTTG 57.870 37.500 10.38 0.00 0.00 3.16
2801 2873 5.650266 TGGACTGTCATTGTTGTTTACTTGT 59.350 36.000 10.38 0.00 0.00 3.16
2802 2874 6.151985 TGGACTGTCATTGTTGTTTACTTGTT 59.848 34.615 10.38 0.00 0.00 2.83
2803 2875 6.691388 GGACTGTCATTGTTGTTTACTTGTTC 59.309 38.462 10.38 0.00 0.00 3.18
2804 2876 7.391148 ACTGTCATTGTTGTTTACTTGTTCT 57.609 32.000 0.00 0.00 0.00 3.01
2805 2877 7.250569 ACTGTCATTGTTGTTTACTTGTTCTG 58.749 34.615 0.00 0.00 0.00 3.02
2806 2878 6.559810 TGTCATTGTTGTTTACTTGTTCTGG 58.440 36.000 0.00 0.00 0.00 3.86
2807 2879 6.151985 TGTCATTGTTGTTTACTTGTTCTGGT 59.848 34.615 0.00 0.00 0.00 4.00
2808 2880 7.033185 GTCATTGTTGTTTACTTGTTCTGGTT 58.967 34.615 0.00 0.00 0.00 3.67
2809 2881 7.009174 GTCATTGTTGTTTACTTGTTCTGGTTG 59.991 37.037 0.00 0.00 0.00 3.77
2810 2882 4.739195 TGTTGTTTACTTGTTCTGGTTGC 58.261 39.130 0.00 0.00 0.00 4.17
2811 2883 4.218635 TGTTGTTTACTTGTTCTGGTTGCA 59.781 37.500 0.00 0.00 0.00 4.08
2812 2884 4.630894 TGTTTACTTGTTCTGGTTGCAG 57.369 40.909 0.00 0.00 0.00 4.41
2813 2885 3.181491 TGTTTACTTGTTCTGGTTGCAGC 60.181 43.478 0.00 0.00 0.00 5.25
2814 2886 2.340210 TACTTGTTCTGGTTGCAGCA 57.660 45.000 2.05 0.00 0.00 4.41
2815 2887 1.696063 ACTTGTTCTGGTTGCAGCAT 58.304 45.000 2.05 0.00 0.00 3.79
2816 2888 2.034124 ACTTGTTCTGGTTGCAGCATT 58.966 42.857 2.05 0.00 0.00 3.56
2817 2889 3.221771 ACTTGTTCTGGTTGCAGCATTA 58.778 40.909 2.05 0.00 0.00 1.90
2818 2890 3.004734 ACTTGTTCTGGTTGCAGCATTAC 59.995 43.478 2.05 0.00 0.00 1.89
2819 2891 1.885887 TGTTCTGGTTGCAGCATTACC 59.114 47.619 9.11 9.11 0.00 2.85
2820 2892 2.162681 GTTCTGGTTGCAGCATTACCT 58.837 47.619 15.89 0.00 33.05 3.08
2821 2893 3.244735 TGTTCTGGTTGCAGCATTACCTA 60.245 43.478 15.89 3.45 33.05 3.08
2822 2894 3.931907 TCTGGTTGCAGCATTACCTAT 57.068 42.857 15.89 0.00 33.05 2.57
2823 2895 3.808728 TCTGGTTGCAGCATTACCTATC 58.191 45.455 15.89 0.00 33.05 2.08
2824 2896 3.455910 TCTGGTTGCAGCATTACCTATCT 59.544 43.478 15.89 0.00 33.05 1.98
2825 2897 3.544684 TGGTTGCAGCATTACCTATCTG 58.455 45.455 15.89 0.00 33.05 2.90
2826 2898 2.880890 GGTTGCAGCATTACCTATCTGG 59.119 50.000 8.81 0.00 42.93 3.86
2846 2918 7.246171 TCTGGTTCTAGGATTAATATCTGCC 57.754 40.000 0.00 0.00 0.00 4.85
2847 2919 7.019388 TCTGGTTCTAGGATTAATATCTGCCT 58.981 38.462 0.00 0.00 0.00 4.75
2848 2920 7.009179 TGGTTCTAGGATTAATATCTGCCTG 57.991 40.000 3.47 0.00 0.00 4.85
2849 2921 6.787458 TGGTTCTAGGATTAATATCTGCCTGA 59.213 38.462 3.47 0.00 0.00 3.86
2850 2922 7.292356 TGGTTCTAGGATTAATATCTGCCTGAA 59.708 37.037 3.47 3.32 0.00 3.02
2851 2923 8.325046 GGTTCTAGGATTAATATCTGCCTGAAT 58.675 37.037 3.47 0.00 0.00 2.57
2852 2924 9.160496 GTTCTAGGATTAATATCTGCCTGAATG 57.840 37.037 3.47 0.00 0.00 2.67
2853 2925 7.334090 TCTAGGATTAATATCTGCCTGAATGC 58.666 38.462 3.47 0.00 0.00 3.56
2854 2926 6.137104 AGGATTAATATCTGCCTGAATGCT 57.863 37.500 0.00 0.00 0.00 3.79
2855 2927 7.262990 AGGATTAATATCTGCCTGAATGCTA 57.737 36.000 0.00 0.00 0.00 3.49
2856 2928 7.337167 AGGATTAATATCTGCCTGAATGCTAG 58.663 38.462 0.00 0.00 0.00 3.42
2857 2929 7.181665 AGGATTAATATCTGCCTGAATGCTAGA 59.818 37.037 0.00 0.00 0.00 2.43
2858 2930 7.495279 GGATTAATATCTGCCTGAATGCTAGAG 59.505 40.741 0.00 0.00 0.00 2.43
2859 2931 5.822132 AATATCTGCCTGAATGCTAGAGT 57.178 39.130 0.00 0.00 0.00 3.24
2860 2932 5.822132 ATATCTGCCTGAATGCTAGAGTT 57.178 39.130 0.00 0.00 0.00 3.01
2861 2933 3.988976 TCTGCCTGAATGCTAGAGTTT 57.011 42.857 0.00 0.00 0.00 2.66
2862 2934 3.866651 TCTGCCTGAATGCTAGAGTTTC 58.133 45.455 0.00 0.00 0.00 2.78
2863 2935 3.261643 TCTGCCTGAATGCTAGAGTTTCA 59.738 43.478 0.00 0.00 0.00 2.69
2864 2936 3.603532 TGCCTGAATGCTAGAGTTTCAG 58.396 45.455 16.70 16.70 43.75 3.02
2867 2939 3.871485 CTGAATGCTAGAGTTTCAGGCT 58.129 45.455 16.20 0.00 41.58 4.58
2868 2940 4.260170 CTGAATGCTAGAGTTTCAGGCTT 58.740 43.478 16.20 0.00 41.58 4.35
2869 2941 4.655963 TGAATGCTAGAGTTTCAGGCTTT 58.344 39.130 0.00 0.00 0.00 3.51
2870 2942 4.697352 TGAATGCTAGAGTTTCAGGCTTTC 59.303 41.667 0.00 0.00 37.48 2.62
2871 2943 3.769739 TGCTAGAGTTTCAGGCTTTCA 57.230 42.857 0.00 0.00 0.00 2.69
2872 2944 3.668447 TGCTAGAGTTTCAGGCTTTCAG 58.332 45.455 0.00 0.00 0.00 3.02
2873 2945 3.071602 TGCTAGAGTTTCAGGCTTTCAGT 59.928 43.478 0.00 0.00 0.00 3.41
2874 2946 4.068599 GCTAGAGTTTCAGGCTTTCAGTT 58.931 43.478 0.00 0.00 0.00 3.16
2875 2947 4.153296 GCTAGAGTTTCAGGCTTTCAGTTC 59.847 45.833 0.00 0.00 0.00 3.01
2876 2948 4.156455 AGAGTTTCAGGCTTTCAGTTCA 57.844 40.909 0.00 0.00 0.00 3.18
2877 2949 4.723309 AGAGTTTCAGGCTTTCAGTTCAT 58.277 39.130 0.00 0.00 0.00 2.57
2878 2950 5.869579 AGAGTTTCAGGCTTTCAGTTCATA 58.130 37.500 0.00 0.00 0.00 2.15
2879 2951 5.936956 AGAGTTTCAGGCTTTCAGTTCATAG 59.063 40.000 0.00 0.00 0.00 2.23
2880 2952 4.457257 AGTTTCAGGCTTTCAGTTCATAGC 59.543 41.667 0.00 0.00 0.00 2.97
2883 2955 2.024176 GGCTTTCAGTTCATAGCCGA 57.976 50.000 0.00 0.00 43.24 5.54
2884 2956 1.936547 GGCTTTCAGTTCATAGCCGAG 59.063 52.381 0.00 0.00 43.24 4.63
2885 2957 2.622436 GCTTTCAGTTCATAGCCGAGT 58.378 47.619 0.00 0.00 0.00 4.18
2886 2958 3.430374 GGCTTTCAGTTCATAGCCGAGTA 60.430 47.826 0.00 0.00 43.24 2.59
2887 2959 4.181578 GCTTTCAGTTCATAGCCGAGTAA 58.818 43.478 0.00 0.00 0.00 2.24
2888 2960 4.630069 GCTTTCAGTTCATAGCCGAGTAAA 59.370 41.667 0.00 0.00 0.00 2.01
2889 2961 5.446073 GCTTTCAGTTCATAGCCGAGTAAAC 60.446 44.000 0.00 0.00 0.00 2.01
2890 2962 5.401531 TTCAGTTCATAGCCGAGTAAACT 57.598 39.130 0.00 0.00 0.00 2.66
2891 2963 5.401531 TCAGTTCATAGCCGAGTAAACTT 57.598 39.130 0.00 0.00 0.00 2.66
2892 2964 5.168569 TCAGTTCATAGCCGAGTAAACTTG 58.831 41.667 0.00 0.00 0.00 3.16
2893 2965 5.047590 TCAGTTCATAGCCGAGTAAACTTGA 60.048 40.000 0.00 0.00 0.00 3.02
2894 2966 5.637810 CAGTTCATAGCCGAGTAAACTTGAA 59.362 40.000 0.00 0.00 0.00 2.69
2895 2967 5.638234 AGTTCATAGCCGAGTAAACTTGAAC 59.362 40.000 12.16 12.16 41.07 3.18
2896 2968 4.171005 TCATAGCCGAGTAAACTTGAACG 58.829 43.478 0.00 0.00 0.00 3.95
2897 2969 1.145803 AGCCGAGTAAACTTGAACGC 58.854 50.000 0.00 0.00 0.00 4.84
2898 2970 0.165295 GCCGAGTAAACTTGAACGCC 59.835 55.000 0.00 0.00 0.00 5.68
2899 2971 1.504359 CCGAGTAAACTTGAACGCCA 58.496 50.000 0.00 0.00 0.00 5.69
2900 2972 2.073816 CCGAGTAAACTTGAACGCCAT 58.926 47.619 0.00 0.00 0.00 4.40
2901 2973 2.159707 CCGAGTAAACTTGAACGCCATG 60.160 50.000 0.00 0.00 0.00 3.66
2902 2974 2.724839 CGAGTAAACTTGAACGCCATGC 60.725 50.000 0.00 0.00 0.00 4.06
2914 2986 1.727467 GCCATGCGTATTGGTGACC 59.273 57.895 0.00 0.00 36.57 4.02
2915 2987 0.748005 GCCATGCGTATTGGTGACCT 60.748 55.000 2.11 0.00 36.57 3.85
2916 2988 1.299541 CCATGCGTATTGGTGACCTC 58.700 55.000 2.11 0.00 0.00 3.85
2917 2989 0.930310 CATGCGTATTGGTGACCTCG 59.070 55.000 2.11 4.07 0.00 4.63
2918 2990 0.535335 ATGCGTATTGGTGACCTCGT 59.465 50.000 2.11 0.00 0.00 4.18
2919 2991 0.319083 TGCGTATTGGTGACCTCGTT 59.681 50.000 2.11 0.00 0.00 3.85
2920 2992 1.545136 TGCGTATTGGTGACCTCGTTA 59.455 47.619 2.11 0.00 0.00 3.18
2921 2993 2.190981 GCGTATTGGTGACCTCGTTAG 58.809 52.381 2.11 0.00 0.00 2.34
2922 2994 2.416431 GCGTATTGGTGACCTCGTTAGT 60.416 50.000 2.11 0.00 0.00 2.24
2923 2995 3.432782 CGTATTGGTGACCTCGTTAGTC 58.567 50.000 2.11 0.00 34.72 2.59
2924 2996 3.128242 CGTATTGGTGACCTCGTTAGTCT 59.872 47.826 2.11 0.00 35.21 3.24
2925 2997 4.380233 CGTATTGGTGACCTCGTTAGTCTT 60.380 45.833 2.11 0.00 35.21 3.01
2926 2998 4.618920 ATTGGTGACCTCGTTAGTCTTT 57.381 40.909 2.11 0.00 35.21 2.52
2927 2999 3.380479 TGGTGACCTCGTTAGTCTTTG 57.620 47.619 2.11 0.00 35.21 2.77
2928 3000 2.036733 TGGTGACCTCGTTAGTCTTTGG 59.963 50.000 2.11 0.00 35.21 3.28
2929 3001 2.036862 GGTGACCTCGTTAGTCTTTGGT 59.963 50.000 0.00 0.00 35.21 3.67
2930 3002 3.256631 GGTGACCTCGTTAGTCTTTGGTA 59.743 47.826 0.00 0.00 35.21 3.25
2931 3003 4.483311 GTGACCTCGTTAGTCTTTGGTAG 58.517 47.826 0.00 0.00 35.21 3.18
2932 3004 4.217118 GTGACCTCGTTAGTCTTTGGTAGA 59.783 45.833 0.00 0.00 35.21 2.59
2933 3005 5.014858 TGACCTCGTTAGTCTTTGGTAGAT 58.985 41.667 0.00 0.00 34.79 1.98
2934 3006 5.125097 TGACCTCGTTAGTCTTTGGTAGATC 59.875 44.000 0.00 0.00 34.79 2.75
2935 3007 5.262804 ACCTCGTTAGTCTTTGGTAGATCT 58.737 41.667 0.00 0.00 34.79 2.75
2936 3008 5.715753 ACCTCGTTAGTCTTTGGTAGATCTT 59.284 40.000 0.00 0.00 34.79 2.40
2937 3009 6.127675 ACCTCGTTAGTCTTTGGTAGATCTTC 60.128 42.308 0.00 0.00 34.79 2.87
2938 3010 6.127703 CCTCGTTAGTCTTTGGTAGATCTTCA 60.128 42.308 0.00 0.00 34.79 3.02
2939 3011 7.406031 TCGTTAGTCTTTGGTAGATCTTCAT 57.594 36.000 0.00 0.00 34.79 2.57
2940 3012 7.837863 TCGTTAGTCTTTGGTAGATCTTCATT 58.162 34.615 0.00 0.00 34.79 2.57
2941 3013 8.311836 TCGTTAGTCTTTGGTAGATCTTCATTT 58.688 33.333 0.00 0.00 34.79 2.32
2942 3014 8.936864 CGTTAGTCTTTGGTAGATCTTCATTTT 58.063 33.333 0.00 0.00 34.79 1.82
2945 3017 8.558973 AGTCTTTGGTAGATCTTCATTTTCTG 57.441 34.615 0.00 0.00 34.79 3.02
2946 3018 7.609532 AGTCTTTGGTAGATCTTCATTTTCTGG 59.390 37.037 0.00 0.00 34.79 3.86
2947 3019 7.391833 GTCTTTGGTAGATCTTCATTTTCTGGT 59.608 37.037 0.00 0.00 34.79 4.00
2948 3020 8.602424 TCTTTGGTAGATCTTCATTTTCTGGTA 58.398 33.333 0.00 0.00 0.00 3.25
2949 3021 9.231297 CTTTGGTAGATCTTCATTTTCTGGTAA 57.769 33.333 0.00 0.00 0.00 2.85
2950 3022 8.792830 TTGGTAGATCTTCATTTTCTGGTAAG 57.207 34.615 0.00 0.00 0.00 2.34
2951 3023 7.918076 TGGTAGATCTTCATTTTCTGGTAAGT 58.082 34.615 0.00 0.00 0.00 2.24
2952 3024 7.824289 TGGTAGATCTTCATTTTCTGGTAAGTG 59.176 37.037 0.00 0.00 0.00 3.16
2953 3025 8.041323 GGTAGATCTTCATTTTCTGGTAAGTGA 58.959 37.037 0.00 0.00 0.00 3.41
2954 3026 9.092876 GTAGATCTTCATTTTCTGGTAAGTGAG 57.907 37.037 0.00 0.00 0.00 3.51
2955 3027 7.684529 AGATCTTCATTTTCTGGTAAGTGAGT 58.315 34.615 0.00 0.00 0.00 3.41
2956 3028 8.160106 AGATCTTCATTTTCTGGTAAGTGAGTT 58.840 33.333 0.00 0.00 0.00 3.01
2957 3029 7.496529 TCTTCATTTTCTGGTAAGTGAGTTG 57.503 36.000 0.00 0.00 0.00 3.16
2958 3030 6.486657 TCTTCATTTTCTGGTAAGTGAGTTGG 59.513 38.462 0.00 0.00 0.00 3.77
2959 3031 5.935945 TCATTTTCTGGTAAGTGAGTTGGA 58.064 37.500 0.00 0.00 0.00 3.53
2960 3032 6.361433 TCATTTTCTGGTAAGTGAGTTGGAA 58.639 36.000 0.00 0.00 0.00 3.53
2961 3033 6.486657 TCATTTTCTGGTAAGTGAGTTGGAAG 59.513 38.462 0.00 0.00 0.00 3.46
2962 3034 3.402628 TCTGGTAAGTGAGTTGGAAGC 57.597 47.619 0.00 0.00 0.00 3.86
2963 3035 2.703536 TCTGGTAAGTGAGTTGGAAGCA 59.296 45.455 0.00 0.00 0.00 3.91
2964 3036 3.327757 TCTGGTAAGTGAGTTGGAAGCAT 59.672 43.478 0.00 0.00 0.00 3.79
2965 3037 4.530553 TCTGGTAAGTGAGTTGGAAGCATA 59.469 41.667 0.00 0.00 0.00 3.14
2966 3038 4.832248 TGGTAAGTGAGTTGGAAGCATAG 58.168 43.478 0.00 0.00 0.00 2.23
2967 3039 4.192317 GGTAAGTGAGTTGGAAGCATAGG 58.808 47.826 0.00 0.00 0.00 2.57
2968 3040 2.409948 AGTGAGTTGGAAGCATAGGC 57.590 50.000 0.00 0.00 41.61 3.93
2969 3041 1.630369 AGTGAGTTGGAAGCATAGGCA 59.370 47.619 0.67 0.00 44.61 4.75
2970 3042 1.740025 GTGAGTTGGAAGCATAGGCAC 59.260 52.381 0.67 0.00 44.61 5.01
2971 3043 1.340017 TGAGTTGGAAGCATAGGCACC 60.340 52.381 0.67 5.38 44.61 5.01
2972 3044 0.034089 AGTTGGAAGCATAGGCACCC 60.034 55.000 0.67 2.37 44.61 4.61
2973 3045 1.037579 GTTGGAAGCATAGGCACCCC 61.038 60.000 0.67 0.00 44.61 4.95
2974 3046 2.203209 GGAAGCATAGGCACCCCG 60.203 66.667 0.67 0.00 44.61 5.73
2975 3047 2.590092 GAAGCATAGGCACCCCGT 59.410 61.111 0.67 0.00 44.61 5.28
2976 3048 1.819632 GAAGCATAGGCACCCCGTG 60.820 63.158 0.67 0.00 44.61 4.94
2985 3057 4.758251 CACCCCGTGCATCGCAGA 62.758 66.667 0.00 0.00 40.08 4.26
2986 3058 3.785859 ACCCCGTGCATCGCAGAT 61.786 61.111 0.00 0.00 45.12 2.90
2987 3059 3.274586 CCCCGTGCATCGCAGATG 61.275 66.667 12.35 12.35 45.12 2.90
2988 3060 3.945434 CCCGTGCATCGCAGATGC 61.945 66.667 26.21 26.21 45.12 3.91
2993 3065 3.817787 GCATCGCAGATGCAAGGA 58.182 55.556 27.26 0.00 45.12 3.36
2994 3066 2.100846 GCATCGCAGATGCAAGGAA 58.899 52.632 27.26 0.00 45.12 3.36
2995 3067 0.248377 GCATCGCAGATGCAAGGAAC 60.248 55.000 27.26 6.52 45.12 3.62
2996 3068 1.376543 CATCGCAGATGCAAGGAACT 58.623 50.000 5.55 0.00 45.12 3.01
2997 3069 1.063616 CATCGCAGATGCAAGGAACTG 59.936 52.381 5.55 0.00 45.12 3.16
2998 3070 0.035317 TCGCAGATGCAAGGAACTGT 59.965 50.000 5.55 0.00 42.21 3.55
2999 3071 0.167470 CGCAGATGCAAGGAACTGTG 59.833 55.000 5.55 0.00 42.21 3.66
3000 3072 1.242076 GCAGATGCAAGGAACTGTGT 58.758 50.000 0.00 0.00 40.86 3.72
3001 3073 1.068748 GCAGATGCAAGGAACTGTGTG 60.069 52.381 0.00 0.00 40.86 3.82
3002 3074 1.538512 CAGATGCAAGGAACTGTGTGG 59.461 52.381 0.00 0.00 40.86 4.17
3003 3075 1.421268 AGATGCAAGGAACTGTGTGGA 59.579 47.619 0.00 0.00 40.86 4.02
3004 3076 2.040813 AGATGCAAGGAACTGTGTGGAT 59.959 45.455 0.00 0.00 40.86 3.41
3005 3077 3.264193 AGATGCAAGGAACTGTGTGGATA 59.736 43.478 0.00 0.00 40.86 2.59
3006 3078 3.719268 TGCAAGGAACTGTGTGGATAT 57.281 42.857 0.00 0.00 40.86 1.63
3007 3079 4.032960 TGCAAGGAACTGTGTGGATATT 57.967 40.909 0.00 0.00 40.86 1.28
3008 3080 3.758023 TGCAAGGAACTGTGTGGATATTG 59.242 43.478 0.00 0.00 40.86 1.90
3009 3081 3.758554 GCAAGGAACTGTGTGGATATTGT 59.241 43.478 0.00 0.00 40.86 2.71
3010 3082 4.142600 GCAAGGAACTGTGTGGATATTGTC 60.143 45.833 0.00 0.00 40.86 3.18
3011 3083 5.248640 CAAGGAACTGTGTGGATATTGTCT 58.751 41.667 0.00 0.00 40.86 3.41
3012 3084 5.505181 AGGAACTGTGTGGATATTGTCTT 57.495 39.130 0.00 0.00 37.18 3.01
3013 3085 5.880901 AGGAACTGTGTGGATATTGTCTTT 58.119 37.500 0.00 0.00 37.18 2.52
3014 3086 6.306987 AGGAACTGTGTGGATATTGTCTTTT 58.693 36.000 0.00 0.00 37.18 2.27
3015 3087 6.777580 AGGAACTGTGTGGATATTGTCTTTTT 59.222 34.615 0.00 0.00 37.18 1.94
3034 3106 4.750833 TTTTGAGGAGGGTAAATTGGGA 57.249 40.909 0.00 0.00 0.00 4.37
3035 3107 4.965283 TTTGAGGAGGGTAAATTGGGAT 57.035 40.909 0.00 0.00 0.00 3.85
3036 3108 6.410222 TTTTGAGGAGGGTAAATTGGGATA 57.590 37.500 0.00 0.00 0.00 2.59
3037 3109 6.606241 TTTGAGGAGGGTAAATTGGGATAT 57.394 37.500 0.00 0.00 0.00 1.63
3038 3110 5.582950 TGAGGAGGGTAAATTGGGATATG 57.417 43.478 0.00 0.00 0.00 1.78
3039 3111 4.202567 TGAGGAGGGTAAATTGGGATATGC 60.203 45.833 0.00 0.00 0.00 3.14
3040 3112 3.990245 AGGAGGGTAAATTGGGATATGCT 59.010 43.478 0.00 0.00 0.00 3.79
3041 3113 4.082125 GGAGGGTAAATTGGGATATGCTG 58.918 47.826 0.00 0.00 0.00 4.41
3042 3114 4.202567 GGAGGGTAAATTGGGATATGCTGA 60.203 45.833 0.00 0.00 0.00 4.26
3043 3115 5.517299 GGAGGGTAAATTGGGATATGCTGAT 60.517 44.000 0.00 0.00 0.00 2.90
3044 3116 5.969086 AGGGTAAATTGGGATATGCTGATT 58.031 37.500 0.00 0.00 0.00 2.57
3045 3117 6.384603 AGGGTAAATTGGGATATGCTGATTT 58.615 36.000 11.02 11.02 0.00 2.17
3046 3118 6.845975 AGGGTAAATTGGGATATGCTGATTTT 59.154 34.615 11.33 3.39 0.00 1.82
3047 3119 7.348011 AGGGTAAATTGGGATATGCTGATTTTT 59.652 33.333 11.33 2.10 0.00 1.94
3075 3147 1.479709 TTTTTGCGGGGTGGGATATG 58.520 50.000 0.00 0.00 0.00 1.78
3076 3148 1.040339 TTTTGCGGGGTGGGATATGC 61.040 55.000 0.00 0.00 0.00 3.14
3077 3149 1.932156 TTTGCGGGGTGGGATATGCT 61.932 55.000 0.00 0.00 0.00 3.79
3078 3150 2.281761 GCGGGGTGGGATATGCTG 60.282 66.667 0.00 0.00 0.00 4.41
3079 3151 2.818169 GCGGGGTGGGATATGCTGA 61.818 63.158 0.00 0.00 0.00 4.26
3080 3152 1.836391 CGGGGTGGGATATGCTGAA 59.164 57.895 0.00 0.00 0.00 3.02
3081 3153 0.401738 CGGGGTGGGATATGCTGAAT 59.598 55.000 0.00 0.00 0.00 2.57
3082 3154 1.202927 CGGGGTGGGATATGCTGAATT 60.203 52.381 0.00 0.00 0.00 2.17
3083 3155 2.752829 CGGGGTGGGATATGCTGAATTT 60.753 50.000 0.00 0.00 0.00 1.82
3084 3156 2.629617 GGGGTGGGATATGCTGAATTTG 59.370 50.000 0.00 0.00 0.00 2.32
3085 3157 2.036346 GGGTGGGATATGCTGAATTTGC 59.964 50.000 0.00 0.00 0.00 3.68
3086 3158 2.961062 GGTGGGATATGCTGAATTTGCT 59.039 45.455 0.00 0.00 0.00 3.91
3087 3159 3.243636 GGTGGGATATGCTGAATTTGCTG 60.244 47.826 0.00 0.00 0.00 4.41
3088 3160 2.960384 TGGGATATGCTGAATTTGCTGG 59.040 45.455 0.00 0.00 0.00 4.85
3089 3161 2.961062 GGGATATGCTGAATTTGCTGGT 59.039 45.455 0.00 0.00 0.00 4.00
3090 3162 4.144297 GGGATATGCTGAATTTGCTGGTA 58.856 43.478 0.00 0.00 0.00 3.25
3091 3163 4.584325 GGGATATGCTGAATTTGCTGGTAA 59.416 41.667 0.00 0.00 0.00 2.85
3092 3164 5.278660 GGGATATGCTGAATTTGCTGGTAAG 60.279 44.000 0.00 0.00 0.00 2.34
3105 3177 4.322080 GCTGGTAAGCTTTTCTTTTGGT 57.678 40.909 3.20 0.00 46.60 3.67
3106 3178 5.447624 GCTGGTAAGCTTTTCTTTTGGTA 57.552 39.130 3.20 0.00 46.60 3.25
3107 3179 5.220381 GCTGGTAAGCTTTTCTTTTGGTAC 58.780 41.667 3.20 0.00 46.60 3.34
3108 3180 5.009710 GCTGGTAAGCTTTTCTTTTGGTACT 59.990 40.000 3.20 0.00 46.60 2.73
3109 3181 6.461092 GCTGGTAAGCTTTTCTTTTGGTACTT 60.461 38.462 3.20 0.00 46.60 2.24
3110 3182 7.255346 GCTGGTAAGCTTTTCTTTTGGTACTTA 60.255 37.037 3.20 0.00 46.60 2.24
3111 3183 8.700439 TGGTAAGCTTTTCTTTTGGTACTTAT 57.300 30.769 3.20 0.00 36.25 1.73
3112 3184 8.789762 TGGTAAGCTTTTCTTTTGGTACTTATC 58.210 33.333 3.20 0.00 36.25 1.75
3113 3185 9.011095 GGTAAGCTTTTCTTTTGGTACTTATCT 57.989 33.333 3.20 0.00 36.25 1.98
3114 3186 9.827411 GTAAGCTTTTCTTTTGGTACTTATCTG 57.173 33.333 3.20 0.00 36.25 2.90
3115 3187 7.454260 AGCTTTTCTTTTGGTACTTATCTGG 57.546 36.000 0.00 0.00 0.00 3.86
3116 3188 7.231467 AGCTTTTCTTTTGGTACTTATCTGGA 58.769 34.615 0.00 0.00 0.00 3.86
3117 3189 7.890655 AGCTTTTCTTTTGGTACTTATCTGGAT 59.109 33.333 0.00 0.00 0.00 3.41
3118 3190 7.970614 GCTTTTCTTTTGGTACTTATCTGGATG 59.029 37.037 0.00 0.00 0.00 3.51
3119 3191 8.934023 TTTTCTTTTGGTACTTATCTGGATGT 57.066 30.769 0.00 0.00 0.00 3.06
3120 3192 7.921786 TTCTTTTGGTACTTATCTGGATGTG 57.078 36.000 0.00 0.00 0.00 3.21
3121 3193 7.252612 TCTTTTGGTACTTATCTGGATGTGA 57.747 36.000 0.00 0.00 0.00 3.58
3122 3194 7.103641 TCTTTTGGTACTTATCTGGATGTGAC 58.896 38.462 0.00 0.00 0.00 3.67
3123 3195 4.649088 TGGTACTTATCTGGATGTGACG 57.351 45.455 0.00 0.00 0.00 4.35
3124 3196 4.274978 TGGTACTTATCTGGATGTGACGA 58.725 43.478 0.00 0.00 0.00 4.20
3125 3197 4.338400 TGGTACTTATCTGGATGTGACGAG 59.662 45.833 0.00 0.00 0.00 4.18
3126 3198 4.579340 GGTACTTATCTGGATGTGACGAGA 59.421 45.833 0.00 0.00 0.00 4.04
3127 3199 5.241949 GGTACTTATCTGGATGTGACGAGAT 59.758 44.000 0.00 0.00 38.49 2.75
3128 3200 5.860941 ACTTATCTGGATGTGACGAGATT 57.139 39.130 0.00 0.00 36.85 2.40
3129 3201 5.595885 ACTTATCTGGATGTGACGAGATTG 58.404 41.667 0.00 0.00 36.85 2.67
3130 3202 5.360999 ACTTATCTGGATGTGACGAGATTGA 59.639 40.000 0.00 0.00 36.85 2.57
3131 3203 4.952071 ATCTGGATGTGACGAGATTGAT 57.048 40.909 0.00 0.00 32.93 2.57
3132 3204 4.050852 TCTGGATGTGACGAGATTGATG 57.949 45.455 0.00 0.00 0.00 3.07
3133 3205 3.448660 TCTGGATGTGACGAGATTGATGT 59.551 43.478 0.00 0.00 0.00 3.06
3134 3206 3.785486 TGGATGTGACGAGATTGATGTC 58.215 45.455 0.00 0.00 0.00 3.06
3136 3208 3.489229 GGATGTGACGAGATTGATGTCGA 60.489 47.826 16.07 0.00 45.17 4.20
3137 3209 3.569250 TGTGACGAGATTGATGTCGAA 57.431 42.857 16.07 2.84 45.17 3.71
3138 3210 3.908213 TGTGACGAGATTGATGTCGAAA 58.092 40.909 16.07 2.52 45.17 3.46
3139 3211 4.494484 TGTGACGAGATTGATGTCGAAAT 58.506 39.130 16.07 0.00 45.17 2.17
3140 3212 4.327087 TGTGACGAGATTGATGTCGAAATG 59.673 41.667 16.07 0.00 45.17 2.32
3141 3213 3.306973 TGACGAGATTGATGTCGAAATGC 59.693 43.478 16.07 2.70 45.17 3.56
3142 3214 2.282555 ACGAGATTGATGTCGAAATGCG 59.717 45.455 16.07 0.00 45.17 4.73
3143 3215 2.347939 CGAGATTGATGTCGAAATGCGG 60.348 50.000 4.71 0.00 45.17 5.69
3144 3216 1.942657 AGATTGATGTCGAAATGCGGG 59.057 47.619 0.00 0.00 41.33 6.13
3145 3217 1.939934 GATTGATGTCGAAATGCGGGA 59.060 47.619 0.00 0.00 41.33 5.14
3146 3218 1.814793 TTGATGTCGAAATGCGGGAA 58.185 45.000 0.00 0.00 41.33 3.97
3147 3219 1.083489 TGATGTCGAAATGCGGGAAC 58.917 50.000 0.00 0.00 41.33 3.62
3160 3232 1.205820 GGGAACGCGGTTTCTTTCG 59.794 57.895 12.47 0.00 0.00 3.46
3161 3233 1.205820 GGAACGCGGTTTCTTTCGG 59.794 57.895 12.47 0.00 0.00 4.30
3162 3234 1.501337 GGAACGCGGTTTCTTTCGGT 61.501 55.000 12.47 0.00 0.00 4.69
3163 3235 0.383860 GAACGCGGTTTCTTTCGGTG 60.384 55.000 12.47 0.00 0.00 4.94
3164 3236 1.778027 AACGCGGTTTCTTTCGGTGG 61.778 55.000 12.47 0.00 0.00 4.61
3165 3237 1.957186 CGCGGTTTCTTTCGGTGGA 60.957 57.895 0.00 0.00 0.00 4.02
3166 3238 1.296056 CGCGGTTTCTTTCGGTGGAT 61.296 55.000 0.00 0.00 0.00 3.41
3167 3239 0.879090 GCGGTTTCTTTCGGTGGATT 59.121 50.000 0.00 0.00 0.00 3.01
3168 3240 1.401018 GCGGTTTCTTTCGGTGGATTG 60.401 52.381 0.00 0.00 0.00 2.67
3169 3241 1.401018 CGGTTTCTTTCGGTGGATTGC 60.401 52.381 0.00 0.00 0.00 3.56
3170 3242 1.067846 GGTTTCTTTCGGTGGATTGCC 60.068 52.381 0.00 0.00 0.00 4.52
3171 3243 1.886542 GTTTCTTTCGGTGGATTGCCT 59.113 47.619 0.00 0.00 34.31 4.75
3172 3244 3.078837 GTTTCTTTCGGTGGATTGCCTA 58.921 45.455 0.00 0.00 34.31 3.93
3173 3245 3.426787 TTCTTTCGGTGGATTGCCTAA 57.573 42.857 0.00 0.00 34.31 2.69
3174 3246 3.426787 TCTTTCGGTGGATTGCCTAAA 57.573 42.857 0.00 0.00 34.31 1.85
3175 3247 3.963129 TCTTTCGGTGGATTGCCTAAAT 58.037 40.909 0.00 0.00 34.31 1.40
3176 3248 3.694072 TCTTTCGGTGGATTGCCTAAATG 59.306 43.478 0.00 0.00 34.31 2.32
3177 3249 2.799126 TCGGTGGATTGCCTAAATGT 57.201 45.000 0.00 0.00 34.31 2.71
3178 3250 3.080300 TCGGTGGATTGCCTAAATGTT 57.920 42.857 0.00 0.00 34.31 2.71
3179 3251 3.426615 TCGGTGGATTGCCTAAATGTTT 58.573 40.909 0.00 0.00 34.31 2.83
3180 3252 4.590918 TCGGTGGATTGCCTAAATGTTTA 58.409 39.130 0.00 0.00 34.31 2.01
3181 3253 5.197451 TCGGTGGATTGCCTAAATGTTTAT 58.803 37.500 0.00 0.00 34.31 1.40
3182 3254 5.298276 TCGGTGGATTGCCTAAATGTTTATC 59.702 40.000 0.00 0.00 34.31 1.75
3183 3255 5.067153 CGGTGGATTGCCTAAATGTTTATCA 59.933 40.000 0.00 0.00 34.31 2.15
3184 3256 6.239008 CGGTGGATTGCCTAAATGTTTATCAT 60.239 38.462 0.00 0.00 34.93 2.45
3185 3257 7.040755 CGGTGGATTGCCTAAATGTTTATCATA 60.041 37.037 0.00 0.00 33.79 2.15
3186 3258 8.299570 GGTGGATTGCCTAAATGTTTATCATAG 58.700 37.037 0.00 0.00 33.79 2.23
3187 3259 9.066892 GTGGATTGCCTAAATGTTTATCATAGA 57.933 33.333 0.00 0.00 33.79 1.98
3188 3260 9.812347 TGGATTGCCTAAATGTTTATCATAGAT 57.188 29.630 0.00 0.00 33.79 1.98
3193 3265 8.352201 TGCCTAAATGTTTATCATAGATGTTGC 58.648 33.333 0.00 0.00 35.48 4.17
3194 3266 8.571336 GCCTAAATGTTTATCATAGATGTTGCT 58.429 33.333 0.00 0.00 35.48 3.91
3195 3267 9.888878 CCTAAATGTTTATCATAGATGTTGCTG 57.111 33.333 0.00 0.00 35.48 4.41
3198 3270 8.743085 AATGTTTATCATAGATGTTGCTGTCT 57.257 30.769 0.00 0.00 35.48 3.41
3199 3271 9.836864 AATGTTTATCATAGATGTTGCTGTCTA 57.163 29.630 0.00 0.00 35.48 2.59
3200 3272 8.648557 TGTTTATCATAGATGTTGCTGTCTAC 57.351 34.615 0.00 0.00 30.35 2.59
3201 3273 7.710907 TGTTTATCATAGATGTTGCTGTCTACC 59.289 37.037 0.00 0.00 30.35 3.18
3202 3274 4.307443 TCATAGATGTTGCTGTCTACCG 57.693 45.455 0.00 0.00 30.35 4.02
3203 3275 3.699538 TCATAGATGTTGCTGTCTACCGT 59.300 43.478 0.00 0.00 30.35 4.83
3204 3276 4.159693 TCATAGATGTTGCTGTCTACCGTT 59.840 41.667 0.00 0.00 30.35 4.44
3205 3277 3.402628 AGATGTTGCTGTCTACCGTTT 57.597 42.857 0.00 0.00 0.00 3.60
3206 3278 3.067106 AGATGTTGCTGTCTACCGTTTG 58.933 45.455 0.00 0.00 0.00 2.93
3207 3279 0.941542 TGTTGCTGTCTACCGTTTGC 59.058 50.000 0.00 0.00 0.00 3.68
3208 3280 0.941542 GTTGCTGTCTACCGTTTGCA 59.058 50.000 0.00 0.00 0.00 4.08
3209 3281 1.332375 GTTGCTGTCTACCGTTTGCAA 59.668 47.619 0.00 0.00 37.96 4.08
3210 3282 1.225855 TGCTGTCTACCGTTTGCAAG 58.774 50.000 0.00 0.00 0.00 4.01
3211 3283 1.226746 GCTGTCTACCGTTTGCAAGT 58.773 50.000 0.00 0.00 0.00 3.16
3212 3284 1.602377 GCTGTCTACCGTTTGCAAGTT 59.398 47.619 0.00 0.00 0.00 2.66
3213 3285 2.349532 GCTGTCTACCGTTTGCAAGTTC 60.350 50.000 0.00 0.00 0.00 3.01
3214 3286 2.869801 CTGTCTACCGTTTGCAAGTTCA 59.130 45.455 0.00 0.00 0.00 3.18
3215 3287 2.869801 TGTCTACCGTTTGCAAGTTCAG 59.130 45.455 0.00 0.00 0.00 3.02
3216 3288 3.128349 GTCTACCGTTTGCAAGTTCAGA 58.872 45.455 0.00 0.00 0.00 3.27
3217 3289 3.184581 GTCTACCGTTTGCAAGTTCAGAG 59.815 47.826 0.00 0.00 0.00 3.35
3218 3290 2.038387 ACCGTTTGCAAGTTCAGAGT 57.962 45.000 0.00 0.00 0.00 3.24
3219 3291 2.365582 ACCGTTTGCAAGTTCAGAGTT 58.634 42.857 0.00 0.00 0.00 3.01
3220 3292 2.752903 ACCGTTTGCAAGTTCAGAGTTT 59.247 40.909 0.00 0.00 0.00 2.66
3221 3293 3.942748 ACCGTTTGCAAGTTCAGAGTTTA 59.057 39.130 0.00 0.00 0.00 2.01
3222 3294 4.578928 ACCGTTTGCAAGTTCAGAGTTTAT 59.421 37.500 0.00 0.00 0.00 1.40
3223 3295 5.067283 ACCGTTTGCAAGTTCAGAGTTTATT 59.933 36.000 0.00 0.00 0.00 1.40
3224 3296 5.625311 CCGTTTGCAAGTTCAGAGTTTATTC 59.375 40.000 0.00 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 15 5.560724 TCCTACAGGATGAAAAAGGTCTTG 58.439 41.667 0.00 0.00 39.78 3.02
38 40 4.096681 TCCTCCTTGATCACTTGAAGCTA 58.903 43.478 0.00 0.00 0.00 3.32
73 88 7.816640 TGAATAGTTGAATAGAAAAGGTGTGC 58.183 34.615 0.00 0.00 0.00 4.57
134 158 6.144175 CCAAAATAAAATTGTTGCAGCTTGG 58.856 36.000 1.17 0.19 0.00 3.61
209 233 4.392940 AGGAATAATGTAGCCAGTCATGC 58.607 43.478 0.00 0.00 0.00 4.06
278 302 1.455849 CCCACCCAGACTTGCTTCA 59.544 57.895 0.00 0.00 0.00 3.02
288 312 3.661648 CACCCCTTCCCCACCCAG 61.662 72.222 0.00 0.00 0.00 4.45
309 333 1.772979 ACCCCCTTCTTCCGGTGTT 60.773 57.895 0.00 0.00 0.00 3.32
368 395 0.977627 ATCCCCGTCAGCAGTGATCA 60.978 55.000 0.00 0.00 34.36 2.92
371 398 0.977627 ATCATCCCCGTCAGCAGTGA 60.978 55.000 0.00 0.00 0.00 3.41
409 437 2.483876 CACCACGTTGTTGATCTGTCT 58.516 47.619 0.00 0.00 0.00 3.41
413 441 0.944386 GTGCACCACGTTGTTGATCT 59.056 50.000 5.22 0.00 0.00 2.75
451 479 5.625921 TTTACCGGTAAATTTTTCTCCCG 57.374 39.130 31.25 1.37 30.78 5.14
472 500 5.699097 TTCCATCGACGGAAGAAAAATTT 57.301 34.783 9.28 0.00 40.20 1.82
600 629 5.419542 ACACTATTCGCAGCTGATAAAAGA 58.580 37.500 20.43 3.15 0.00 2.52
601 630 5.725110 ACACTATTCGCAGCTGATAAAAG 57.275 39.130 20.43 10.88 0.00 2.27
609 642 2.472695 TTGGAACACTATTCGCAGCT 57.527 45.000 0.00 0.00 39.29 4.24
727 761 3.054166 CAAAACAGTGGTCGTCGTGATA 58.946 45.455 0.00 0.00 0.00 2.15
735 769 0.315869 GCGTGACAAAACAGTGGTCG 60.316 55.000 0.00 0.00 34.32 4.79
852 887 2.430610 GCTGCGGAGAGGAGATGGT 61.431 63.158 8.65 0.00 41.23 3.55
854 889 2.420890 GGCTGCGGAGAGGAGATG 59.579 66.667 8.65 0.00 41.23 2.90
855 890 3.222855 CGGCTGCGGAGAGGAGAT 61.223 66.667 8.65 0.00 41.23 2.75
918 962 4.722535 AGGGGCTCGGGCAGAAGA 62.723 66.667 10.74 0.00 40.87 2.87
1274 1323 4.436998 GGCTGCGGCTACGACTGT 62.437 66.667 18.85 0.00 44.60 3.55
1368 1417 3.066190 CTGTACTCGCCGTCCCCA 61.066 66.667 0.00 0.00 0.00 4.96
1478 1533 2.335316 AACGTGCTGTAGGTTGGAAA 57.665 45.000 3.08 0.00 36.14 3.13
1532 1596 0.647410 GATGCCATCACGACGAGTTG 59.353 55.000 0.00 0.00 0.00 3.16
1813 1882 1.380112 GGACTCCAGGTCGTAGGCT 60.380 63.158 0.00 0.00 45.35 4.58
1924 1993 2.045242 AGCTCGCCGTAGTCCTCA 60.045 61.111 0.00 0.00 0.00 3.86
2064 2133 0.322277 CTGAATCTGCAGCCTGTGGT 60.322 55.000 9.47 0.00 0.00 4.16
2236 2305 0.904649 AATGACGGTCCAGATCAGCA 59.095 50.000 5.55 0.00 0.00 4.41
2239 2308 1.135112 CGACAATGACGGTCCAGATCA 60.135 52.381 5.55 0.00 31.55 2.92
2262 2331 1.200020 GACAGGTAATGCTGCAACCAC 59.800 52.381 21.89 12.97 35.64 4.16
2280 2349 8.196378 ACATTAATCCTATCCTAGAACCAGAC 57.804 38.462 0.00 0.00 0.00 3.51
2377 2446 4.339530 TCTCACTTACCAGAAGATCCATCG 59.660 45.833 0.00 0.00 0.00 3.84
2427 2497 1.467734 CAGACAGTTTCCTGCATCAGC 59.532 52.381 0.00 0.00 42.81 4.26
2428 2498 2.082231 CCAGACAGTTTCCTGCATCAG 58.918 52.381 0.00 0.00 42.81 2.90
2497 2567 6.597280 AGAAATGCACCAAAACAAAAGCTTAA 59.403 30.769 0.00 0.00 0.00 1.85
2526 2598 0.032815 TCGACATCAAGAACGCCACA 59.967 50.000 0.00 0.00 0.00 4.17
2533 2605 3.063485 TCACGCATTTCGACATCAAGAA 58.937 40.909 0.00 0.00 41.67 2.52
2632 2704 6.127423 GGCACCATCTGAAAACTACTAGTAGA 60.127 42.308 31.93 13.56 36.97 2.59
2633 2705 6.043411 GGCACCATCTGAAAACTACTAGTAG 58.957 44.000 25.30 25.30 39.04 2.57
2634 2706 5.720041 AGGCACCATCTGAAAACTACTAGTA 59.280 40.000 1.89 1.89 0.00 1.82
2635 2707 4.532521 AGGCACCATCTGAAAACTACTAGT 59.467 41.667 0.00 0.00 0.00 2.57
2662 2734 6.593382 CAGCAGCTACTTGAAGAATAAACTCT 59.407 38.462 0.00 0.00 0.00 3.24
2695 2767 6.974622 CAGCAAATATGACATTCAGTTTACCC 59.025 38.462 0.00 0.00 0.00 3.69
2718 2790 2.534298 CACGGAATACAGAGCAGTCAG 58.466 52.381 0.00 0.00 0.00 3.51
2722 2794 0.537188 ACCCACGGAATACAGAGCAG 59.463 55.000 0.00 0.00 0.00 4.24
2723 2795 0.981183 AACCCACGGAATACAGAGCA 59.019 50.000 0.00 0.00 0.00 4.26
2724 2796 2.109425 AAACCCACGGAATACAGAGC 57.891 50.000 0.00 0.00 0.00 4.09
2725 2797 3.007635 GGAAAACCCACGGAATACAGAG 58.992 50.000 0.00 0.00 34.14 3.35
2726 2798 2.372504 TGGAAAACCCACGGAATACAGA 59.627 45.455 0.00 0.00 40.82 3.41
2727 2799 2.785562 TGGAAAACCCACGGAATACAG 58.214 47.619 0.00 0.00 40.82 2.74
2728 2800 2.953284 TGGAAAACCCACGGAATACA 57.047 45.000 0.00 0.00 40.82 2.29
2729 2801 3.759618 TCATTGGAAAACCCACGGAATAC 59.240 43.478 0.00 0.00 46.62 1.89
2730 2802 3.759618 GTCATTGGAAAACCCACGGAATA 59.240 43.478 0.00 0.00 46.62 1.75
2731 2803 2.560981 GTCATTGGAAAACCCACGGAAT 59.439 45.455 0.00 0.00 46.62 3.01
2732 2804 1.957877 GTCATTGGAAAACCCACGGAA 59.042 47.619 0.00 0.00 46.62 4.30
2733 2805 1.133761 TGTCATTGGAAAACCCACGGA 60.134 47.619 0.00 0.00 46.62 4.69
2734 2806 1.323412 TGTCATTGGAAAACCCACGG 58.677 50.000 0.00 0.00 46.62 4.94
2735 2807 3.658757 AATGTCATTGGAAAACCCACG 57.341 42.857 0.00 0.00 46.62 4.94
2736 2808 4.511082 CACAAATGTCATTGGAAAACCCAC 59.489 41.667 6.96 0.00 46.62 4.61
2737 2809 4.163078 ACACAAATGTCATTGGAAAACCCA 59.837 37.500 6.96 0.00 37.62 4.51
2738 2810 4.702831 ACACAAATGTCATTGGAAAACCC 58.297 39.130 6.96 0.00 31.55 4.11
2751 2823 2.066262 GTCCGATGACGACACAAATGT 58.934 47.619 0.00 0.00 43.71 2.71
2752 2824 1.393539 GGTCCGATGACGACACAAATG 59.606 52.381 0.00 0.00 42.73 2.32
2753 2825 1.722011 GGTCCGATGACGACACAAAT 58.278 50.000 0.00 0.00 42.73 2.32
2754 2826 0.665068 CGGTCCGATGACGACACAAA 60.665 55.000 4.91 0.00 42.73 2.83
2755 2827 1.081041 CGGTCCGATGACGACACAA 60.081 57.895 4.91 0.00 42.73 3.33
2756 2828 1.798234 AACGGTCCGATGACGACACA 61.798 55.000 20.51 0.00 42.73 3.72
2757 2829 0.168788 TAACGGTCCGATGACGACAC 59.831 55.000 20.51 0.00 42.73 3.67
2758 2830 1.097232 ATAACGGTCCGATGACGACA 58.903 50.000 20.51 0.00 42.73 4.35
2759 2831 1.474017 CATAACGGTCCGATGACGAC 58.526 55.000 20.51 0.00 42.73 4.34
2760 2832 0.382873 CCATAACGGTCCGATGACGA 59.617 55.000 20.51 0.00 42.73 4.20
2761 2833 0.382873 TCCATAACGGTCCGATGACG 59.617 55.000 20.51 2.11 42.73 4.35
2762 2834 1.407979 AGTCCATAACGGTCCGATGAC 59.592 52.381 20.51 15.13 40.98 3.06
2763 2835 1.407618 CAGTCCATAACGGTCCGATGA 59.592 52.381 20.51 2.33 35.57 2.92
2764 2836 1.136305 ACAGTCCATAACGGTCCGATG 59.864 52.381 20.51 12.10 29.58 3.84
2765 2837 1.407979 GACAGTCCATAACGGTCCGAT 59.592 52.381 20.51 9.18 44.45 4.18
2766 2838 0.813184 GACAGTCCATAACGGTCCGA 59.187 55.000 20.51 0.00 44.45 4.55
2767 2839 3.340727 GACAGTCCATAACGGTCCG 57.659 57.895 10.48 10.48 44.45 4.79
2770 2842 3.695830 ACAATGACAGTCCATAACGGT 57.304 42.857 0.00 0.00 39.13 4.83
2771 2843 3.751175 ACAACAATGACAGTCCATAACGG 59.249 43.478 0.00 0.00 0.00 4.44
2772 2844 5.356882 AACAACAATGACAGTCCATAACG 57.643 39.130 0.00 0.00 0.00 3.18
2773 2845 7.871853 AGTAAACAACAATGACAGTCCATAAC 58.128 34.615 0.00 0.00 0.00 1.89
2774 2846 8.349245 CAAGTAAACAACAATGACAGTCCATAA 58.651 33.333 0.00 0.00 0.00 1.90
2775 2847 7.500892 ACAAGTAAACAACAATGACAGTCCATA 59.499 33.333 0.00 0.00 0.00 2.74
2776 2848 6.321181 ACAAGTAAACAACAATGACAGTCCAT 59.679 34.615 0.00 0.00 0.00 3.41
2777 2849 5.650266 ACAAGTAAACAACAATGACAGTCCA 59.350 36.000 0.00 0.00 0.00 4.02
2778 2850 6.131544 ACAAGTAAACAACAATGACAGTCC 57.868 37.500 0.00 0.00 0.00 3.85
2779 2851 7.429340 CAGAACAAGTAAACAACAATGACAGTC 59.571 37.037 0.00 0.00 0.00 3.51
2780 2852 7.250569 CAGAACAAGTAAACAACAATGACAGT 58.749 34.615 0.00 0.00 0.00 3.55
2781 2853 6.692681 CCAGAACAAGTAAACAACAATGACAG 59.307 38.462 0.00 0.00 0.00 3.51
2782 2854 6.151985 ACCAGAACAAGTAAACAACAATGACA 59.848 34.615 0.00 0.00 0.00 3.58
2783 2855 6.560711 ACCAGAACAAGTAAACAACAATGAC 58.439 36.000 0.00 0.00 0.00 3.06
2784 2856 6.767524 ACCAGAACAAGTAAACAACAATGA 57.232 33.333 0.00 0.00 0.00 2.57
2785 2857 6.237808 GCAACCAGAACAAGTAAACAACAATG 60.238 38.462 0.00 0.00 0.00 2.82
2786 2858 5.810074 GCAACCAGAACAAGTAAACAACAAT 59.190 36.000 0.00 0.00 0.00 2.71
2787 2859 5.164954 GCAACCAGAACAAGTAAACAACAA 58.835 37.500 0.00 0.00 0.00 2.83
2788 2860 4.218635 TGCAACCAGAACAAGTAAACAACA 59.781 37.500 0.00 0.00 0.00 3.33
2789 2861 4.739195 TGCAACCAGAACAAGTAAACAAC 58.261 39.130 0.00 0.00 0.00 3.32
2790 2862 4.676723 GCTGCAACCAGAACAAGTAAACAA 60.677 41.667 0.00 0.00 41.77 2.83
2791 2863 3.181491 GCTGCAACCAGAACAAGTAAACA 60.181 43.478 0.00 0.00 41.77 2.83
2792 2864 3.181491 TGCTGCAACCAGAACAAGTAAAC 60.181 43.478 0.00 0.00 41.77 2.01
2793 2865 3.020274 TGCTGCAACCAGAACAAGTAAA 58.980 40.909 0.00 0.00 41.77 2.01
2794 2866 2.649190 TGCTGCAACCAGAACAAGTAA 58.351 42.857 0.00 0.00 41.77 2.24
2795 2867 2.340210 TGCTGCAACCAGAACAAGTA 57.660 45.000 0.00 0.00 41.77 2.24
2796 2868 1.696063 ATGCTGCAACCAGAACAAGT 58.304 45.000 6.36 0.00 41.77 3.16
2797 2869 2.806608 AATGCTGCAACCAGAACAAG 57.193 45.000 6.36 0.00 41.77 3.16
2798 2870 2.295909 GGTAATGCTGCAACCAGAACAA 59.704 45.455 16.61 0.00 41.77 2.83
2799 2871 1.885887 GGTAATGCTGCAACCAGAACA 59.114 47.619 16.61 0.00 41.77 3.18
2800 2872 2.162681 AGGTAATGCTGCAACCAGAAC 58.837 47.619 21.89 8.11 41.77 3.01
2801 2873 2.584835 AGGTAATGCTGCAACCAGAA 57.415 45.000 21.89 0.00 41.77 3.02
2802 2874 3.455910 AGATAGGTAATGCTGCAACCAGA 59.544 43.478 21.89 11.88 41.77 3.86
2803 2875 3.562973 CAGATAGGTAATGCTGCAACCAG 59.437 47.826 21.89 6.08 42.13 4.00
2804 2876 3.544684 CAGATAGGTAATGCTGCAACCA 58.455 45.455 21.89 10.80 35.64 3.67
2805 2877 2.880890 CCAGATAGGTAATGCTGCAACC 59.119 50.000 14.27 14.27 0.00 3.77
2820 2892 8.982723 GGCAGATATTAATCCTAGAACCAGATA 58.017 37.037 0.00 0.00 31.98 1.98
2821 2893 7.682028 AGGCAGATATTAATCCTAGAACCAGAT 59.318 37.037 0.00 0.00 31.98 2.90
2822 2894 7.019388 AGGCAGATATTAATCCTAGAACCAGA 58.981 38.462 0.00 0.00 31.98 3.86
2823 2895 7.038729 TCAGGCAGATATTAATCCTAGAACCAG 60.039 40.741 0.00 0.00 31.98 4.00
2824 2896 6.787458 TCAGGCAGATATTAATCCTAGAACCA 59.213 38.462 0.00 0.00 31.98 3.67
2825 2897 7.246171 TCAGGCAGATATTAATCCTAGAACC 57.754 40.000 0.00 0.00 31.98 3.62
2826 2898 9.160496 CATTCAGGCAGATATTAATCCTAGAAC 57.840 37.037 0.00 0.00 31.98 3.01
2827 2899 7.826252 GCATTCAGGCAGATATTAATCCTAGAA 59.174 37.037 0.00 0.47 31.98 2.10
2828 2900 7.181665 AGCATTCAGGCAGATATTAATCCTAGA 59.818 37.037 0.00 0.00 35.83 2.43
2829 2901 7.337167 AGCATTCAGGCAGATATTAATCCTAG 58.663 38.462 0.00 0.00 35.83 3.02
2830 2902 7.262990 AGCATTCAGGCAGATATTAATCCTA 57.737 36.000 0.00 0.00 35.83 2.94
2831 2903 6.137104 AGCATTCAGGCAGATATTAATCCT 57.863 37.500 0.00 0.00 35.83 3.24
2832 2904 7.334090 TCTAGCATTCAGGCAGATATTAATCC 58.666 38.462 0.00 0.00 35.83 3.01
2833 2905 8.040132 ACTCTAGCATTCAGGCAGATATTAATC 58.960 37.037 0.00 0.00 35.83 1.75
2834 2906 7.915930 ACTCTAGCATTCAGGCAGATATTAAT 58.084 34.615 0.00 0.00 35.83 1.40
2835 2907 7.308450 ACTCTAGCATTCAGGCAGATATTAA 57.692 36.000 0.00 0.00 35.83 1.40
2836 2908 6.924913 ACTCTAGCATTCAGGCAGATATTA 57.075 37.500 0.00 0.00 35.83 0.98
2837 2909 5.822132 ACTCTAGCATTCAGGCAGATATT 57.178 39.130 0.00 0.00 35.83 1.28
2838 2910 5.822132 AACTCTAGCATTCAGGCAGATAT 57.178 39.130 0.00 0.00 35.83 1.63
2839 2911 5.129320 TGAAACTCTAGCATTCAGGCAGATA 59.871 40.000 0.00 0.00 35.83 1.98
2840 2912 4.080695 TGAAACTCTAGCATTCAGGCAGAT 60.081 41.667 0.00 0.00 35.83 2.90
2841 2913 3.261643 TGAAACTCTAGCATTCAGGCAGA 59.738 43.478 0.00 0.00 35.83 4.26
2842 2914 3.603532 TGAAACTCTAGCATTCAGGCAG 58.396 45.455 0.00 0.00 35.83 4.85
2843 2915 3.603532 CTGAAACTCTAGCATTCAGGCA 58.396 45.455 17.39 0.00 43.92 4.75
2846 2918 3.871485 AGCCTGAAACTCTAGCATTCAG 58.129 45.455 17.88 17.88 46.06 3.02
2847 2919 3.988976 AGCCTGAAACTCTAGCATTCA 57.011 42.857 0.00 5.10 0.00 2.57
2848 2920 4.697352 TGAAAGCCTGAAACTCTAGCATTC 59.303 41.667 0.00 0.00 33.16 2.67
2849 2921 4.655963 TGAAAGCCTGAAACTCTAGCATT 58.344 39.130 0.00 0.00 0.00 3.56
2850 2922 4.260170 CTGAAAGCCTGAAACTCTAGCAT 58.740 43.478 0.00 0.00 0.00 3.79
2851 2923 3.071602 ACTGAAAGCCTGAAACTCTAGCA 59.928 43.478 0.00 0.00 37.60 3.49
2852 2924 3.669536 ACTGAAAGCCTGAAACTCTAGC 58.330 45.455 0.00 0.00 37.60 3.42
2853 2925 5.300752 TGAACTGAAAGCCTGAAACTCTAG 58.699 41.667 0.00 0.00 37.60 2.43
2854 2926 5.290493 TGAACTGAAAGCCTGAAACTCTA 57.710 39.130 0.00 0.00 37.60 2.43
2855 2927 4.156455 TGAACTGAAAGCCTGAAACTCT 57.844 40.909 0.00 0.00 37.60 3.24
2856 2928 5.391416 GCTATGAACTGAAAGCCTGAAACTC 60.391 44.000 0.00 0.00 37.60 3.01
2857 2929 4.457257 GCTATGAACTGAAAGCCTGAAACT 59.543 41.667 0.00 0.00 37.60 2.66
2858 2930 4.727475 GCTATGAACTGAAAGCCTGAAAC 58.273 43.478 0.00 0.00 37.60 2.78
2865 2937 2.622436 ACTCGGCTATGAACTGAAAGC 58.378 47.619 0.00 0.00 37.60 3.51
2866 2938 5.869888 AGTTTACTCGGCTATGAACTGAAAG 59.130 40.000 0.00 0.00 42.29 2.62
2867 2939 5.790593 AGTTTACTCGGCTATGAACTGAAA 58.209 37.500 0.00 0.00 0.00 2.69
2868 2940 5.401531 AGTTTACTCGGCTATGAACTGAA 57.598 39.130 0.00 0.00 0.00 3.02
2869 2941 5.047590 TCAAGTTTACTCGGCTATGAACTGA 60.048 40.000 0.00 0.00 0.00 3.41
2870 2942 5.168569 TCAAGTTTACTCGGCTATGAACTG 58.831 41.667 0.00 0.00 0.00 3.16
2871 2943 5.401531 TCAAGTTTACTCGGCTATGAACT 57.598 39.130 0.00 0.00 0.00 3.01
2872 2944 5.444218 CGTTCAAGTTTACTCGGCTATGAAC 60.444 44.000 10.61 10.61 41.02 3.18
2873 2945 4.624024 CGTTCAAGTTTACTCGGCTATGAA 59.376 41.667 0.00 0.00 0.00 2.57
2874 2946 4.171005 CGTTCAAGTTTACTCGGCTATGA 58.829 43.478 0.00 0.00 0.00 2.15
2875 2947 3.241995 GCGTTCAAGTTTACTCGGCTATG 60.242 47.826 0.00 0.00 0.00 2.23
2876 2948 2.928116 GCGTTCAAGTTTACTCGGCTAT 59.072 45.455 0.00 0.00 0.00 2.97
2877 2949 2.331194 GCGTTCAAGTTTACTCGGCTA 58.669 47.619 0.00 0.00 0.00 3.93
2878 2950 1.145803 GCGTTCAAGTTTACTCGGCT 58.854 50.000 0.00 0.00 0.00 5.52
2879 2951 0.165295 GGCGTTCAAGTTTACTCGGC 59.835 55.000 0.00 0.00 36.81 5.54
2880 2952 1.504359 TGGCGTTCAAGTTTACTCGG 58.496 50.000 0.00 0.00 0.00 4.63
2881 2953 2.724839 GCATGGCGTTCAAGTTTACTCG 60.725 50.000 0.00 0.00 0.00 4.18
2882 2954 2.851534 GCATGGCGTTCAAGTTTACTC 58.148 47.619 0.00 0.00 0.00 2.59
2883 2955 2.989422 GCATGGCGTTCAAGTTTACT 57.011 45.000 0.00 0.00 0.00 2.24
2896 2968 0.748005 AGGTCACCAATACGCATGGC 60.748 55.000 0.00 0.00 41.89 4.40
2897 2969 1.299541 GAGGTCACCAATACGCATGG 58.700 55.000 0.00 0.55 43.84 3.66
2898 2970 0.930310 CGAGGTCACCAATACGCATG 59.070 55.000 0.00 0.00 0.00 4.06
2899 2971 0.535335 ACGAGGTCACCAATACGCAT 59.465 50.000 0.00 0.00 0.00 4.73
2900 2972 0.319083 AACGAGGTCACCAATACGCA 59.681 50.000 0.00 0.00 0.00 5.24
2901 2973 2.190981 CTAACGAGGTCACCAATACGC 58.809 52.381 0.00 0.00 0.00 4.42
2902 2974 3.128242 AGACTAACGAGGTCACCAATACG 59.872 47.826 0.00 0.00 36.29 3.06
2903 2975 4.715527 AGACTAACGAGGTCACCAATAC 57.284 45.455 0.00 0.00 36.29 1.89
2904 2976 5.475719 CAAAGACTAACGAGGTCACCAATA 58.524 41.667 0.00 0.00 36.29 1.90
2905 2977 4.315803 CAAAGACTAACGAGGTCACCAAT 58.684 43.478 0.00 0.00 36.29 3.16
2906 2978 3.493699 CCAAAGACTAACGAGGTCACCAA 60.494 47.826 0.00 0.00 36.29 3.67
2907 2979 2.036733 CCAAAGACTAACGAGGTCACCA 59.963 50.000 0.00 0.00 36.29 4.17
2908 2980 2.036862 ACCAAAGACTAACGAGGTCACC 59.963 50.000 0.00 0.00 36.29 4.02
2909 2981 3.382048 ACCAAAGACTAACGAGGTCAC 57.618 47.619 0.00 0.00 36.29 3.67
2910 2982 4.401022 TCTACCAAAGACTAACGAGGTCA 58.599 43.478 0.00 0.00 36.29 4.02
2911 2983 5.357596 AGATCTACCAAAGACTAACGAGGTC 59.642 44.000 0.00 0.00 36.93 3.85
2912 2984 5.262804 AGATCTACCAAAGACTAACGAGGT 58.737 41.667 0.00 0.00 36.93 3.85
2913 2985 5.838531 AGATCTACCAAAGACTAACGAGG 57.161 43.478 0.00 0.00 36.93 4.63
2914 2986 6.853720 TGAAGATCTACCAAAGACTAACGAG 58.146 40.000 0.00 0.00 36.93 4.18
2915 2987 6.829229 TGAAGATCTACCAAAGACTAACGA 57.171 37.500 0.00 0.00 36.93 3.85
2916 2988 8.480643 AAATGAAGATCTACCAAAGACTAACG 57.519 34.615 0.00 0.00 36.93 3.18
2919 2991 9.658799 CAGAAAATGAAGATCTACCAAAGACTA 57.341 33.333 0.00 0.00 36.93 2.59
2920 2992 7.609532 CCAGAAAATGAAGATCTACCAAAGACT 59.390 37.037 0.00 0.00 36.93 3.24
2921 2993 7.391833 ACCAGAAAATGAAGATCTACCAAAGAC 59.608 37.037 0.00 0.00 36.93 3.01
2922 2994 7.461749 ACCAGAAAATGAAGATCTACCAAAGA 58.538 34.615 0.00 0.00 39.02 2.52
2923 2995 7.693969 ACCAGAAAATGAAGATCTACCAAAG 57.306 36.000 0.00 0.00 0.00 2.77
2924 2996 9.231297 CTTACCAGAAAATGAAGATCTACCAAA 57.769 33.333 0.00 0.00 0.00 3.28
2925 2997 8.383175 ACTTACCAGAAAATGAAGATCTACCAA 58.617 33.333 0.00 0.00 0.00 3.67
2926 2998 7.824289 CACTTACCAGAAAATGAAGATCTACCA 59.176 37.037 0.00 0.00 0.00 3.25
2927 2999 8.041323 TCACTTACCAGAAAATGAAGATCTACC 58.959 37.037 0.00 0.00 0.00 3.18
2928 3000 9.092876 CTCACTTACCAGAAAATGAAGATCTAC 57.907 37.037 0.00 0.00 0.00 2.59
2929 3001 8.816894 ACTCACTTACCAGAAAATGAAGATCTA 58.183 33.333 0.00 0.00 0.00 1.98
2930 3002 7.684529 ACTCACTTACCAGAAAATGAAGATCT 58.315 34.615 0.00 0.00 0.00 2.75
2931 3003 7.913674 ACTCACTTACCAGAAAATGAAGATC 57.086 36.000 0.00 0.00 0.00 2.75
2932 3004 7.175641 CCAACTCACTTACCAGAAAATGAAGAT 59.824 37.037 0.00 0.00 0.00 2.40
2933 3005 6.486657 CCAACTCACTTACCAGAAAATGAAGA 59.513 38.462 0.00 0.00 0.00 2.87
2934 3006 6.486657 TCCAACTCACTTACCAGAAAATGAAG 59.513 38.462 0.00 0.00 0.00 3.02
2935 3007 6.361433 TCCAACTCACTTACCAGAAAATGAA 58.639 36.000 0.00 0.00 0.00 2.57
2936 3008 5.935945 TCCAACTCACTTACCAGAAAATGA 58.064 37.500 0.00 0.00 0.00 2.57
2937 3009 6.633500 TTCCAACTCACTTACCAGAAAATG 57.367 37.500 0.00 0.00 0.00 2.32
2938 3010 5.241728 GCTTCCAACTCACTTACCAGAAAAT 59.758 40.000 0.00 0.00 0.00 1.82
2939 3011 4.578928 GCTTCCAACTCACTTACCAGAAAA 59.421 41.667 0.00 0.00 0.00 2.29
2940 3012 4.134563 GCTTCCAACTCACTTACCAGAAA 58.865 43.478 0.00 0.00 0.00 2.52
2941 3013 3.135712 TGCTTCCAACTCACTTACCAGAA 59.864 43.478 0.00 0.00 0.00 3.02
2942 3014 2.703536 TGCTTCCAACTCACTTACCAGA 59.296 45.455 0.00 0.00 0.00 3.86
2943 3015 3.126001 TGCTTCCAACTCACTTACCAG 57.874 47.619 0.00 0.00 0.00 4.00
2944 3016 3.788227 ATGCTTCCAACTCACTTACCA 57.212 42.857 0.00 0.00 0.00 3.25
2945 3017 4.192317 CCTATGCTTCCAACTCACTTACC 58.808 47.826 0.00 0.00 0.00 2.85
2946 3018 3.623510 GCCTATGCTTCCAACTCACTTAC 59.376 47.826 0.00 0.00 33.53 2.34
2947 3019 3.263170 TGCCTATGCTTCCAACTCACTTA 59.737 43.478 0.00 0.00 38.71 2.24
2948 3020 2.040278 TGCCTATGCTTCCAACTCACTT 59.960 45.455 0.00 0.00 38.71 3.16
2949 3021 1.630369 TGCCTATGCTTCCAACTCACT 59.370 47.619 0.00 0.00 38.71 3.41
2950 3022 1.740025 GTGCCTATGCTTCCAACTCAC 59.260 52.381 0.00 0.00 38.71 3.51
2951 3023 1.340017 GGTGCCTATGCTTCCAACTCA 60.340 52.381 0.00 0.00 38.71 3.41
2952 3024 1.383523 GGTGCCTATGCTTCCAACTC 58.616 55.000 0.00 0.00 38.71 3.01
2953 3025 0.034089 GGGTGCCTATGCTTCCAACT 60.034 55.000 6.98 0.00 38.71 3.16
2954 3026 1.037579 GGGGTGCCTATGCTTCCAAC 61.038 60.000 6.98 0.00 38.71 3.77
2955 3027 1.306296 GGGGTGCCTATGCTTCCAA 59.694 57.895 6.98 0.00 38.71 3.53
2956 3028 3.006677 GGGGTGCCTATGCTTCCA 58.993 61.111 6.98 0.00 38.71 3.53
2957 3029 2.203209 CGGGGTGCCTATGCTTCC 60.203 66.667 0.00 0.00 38.71 3.46
2958 3030 1.819632 CACGGGGTGCCTATGCTTC 60.820 63.158 0.00 0.00 38.71 3.86
2959 3031 2.272146 CACGGGGTGCCTATGCTT 59.728 61.111 0.00 0.00 38.71 3.91
2968 3040 4.758251 TCTGCGATGCACGGGGTG 62.758 66.667 10.02 0.00 42.83 4.61
2969 3041 3.785859 ATCTGCGATGCACGGGGT 61.786 61.111 10.02 0.00 42.83 4.95
2970 3042 3.274586 CATCTGCGATGCACGGGG 61.275 66.667 10.02 0.00 42.83 5.73
2971 3043 3.945434 GCATCTGCGATGCACGGG 61.945 66.667 27.26 0.00 44.00 5.28
2976 3048 0.248377 GTTCCTTGCATCTGCGATGC 60.248 55.000 26.21 26.21 45.83 3.91
2977 3049 1.063616 CAGTTCCTTGCATCTGCGATG 59.936 52.381 12.35 12.35 45.83 3.84
2978 3050 1.339438 ACAGTTCCTTGCATCTGCGAT 60.339 47.619 0.00 0.00 45.83 4.58
2979 3051 0.035317 ACAGTTCCTTGCATCTGCGA 59.965 50.000 0.00 0.00 45.83 5.10
2980 3052 0.167470 CACAGTTCCTTGCATCTGCG 59.833 55.000 0.00 0.00 45.83 5.18
2981 3053 1.068748 CACACAGTTCCTTGCATCTGC 60.069 52.381 0.00 0.00 42.50 4.26
2982 3054 1.538512 CCACACAGTTCCTTGCATCTG 59.461 52.381 0.00 0.00 0.00 2.90
2983 3055 1.421268 TCCACACAGTTCCTTGCATCT 59.579 47.619 0.00 0.00 0.00 2.90
2984 3056 1.896220 TCCACACAGTTCCTTGCATC 58.104 50.000 0.00 0.00 0.00 3.91
2985 3057 2.592102 ATCCACACAGTTCCTTGCAT 57.408 45.000 0.00 0.00 0.00 3.96
2986 3058 3.719268 ATATCCACACAGTTCCTTGCA 57.281 42.857 0.00 0.00 0.00 4.08
2987 3059 3.758554 ACAATATCCACACAGTTCCTTGC 59.241 43.478 0.00 0.00 0.00 4.01
2988 3060 5.248640 AGACAATATCCACACAGTTCCTTG 58.751 41.667 0.00 0.00 0.00 3.61
2989 3061 5.505181 AGACAATATCCACACAGTTCCTT 57.495 39.130 0.00 0.00 0.00 3.36
2990 3062 5.505181 AAGACAATATCCACACAGTTCCT 57.495 39.130 0.00 0.00 0.00 3.36
2991 3063 6.575162 AAAAGACAATATCCACACAGTTCC 57.425 37.500 0.00 0.00 0.00 3.62
3012 3084 5.081315 TCCCAATTTACCCTCCTCAAAAA 57.919 39.130 0.00 0.00 0.00 1.94
3013 3085 4.750833 TCCCAATTTACCCTCCTCAAAA 57.249 40.909 0.00 0.00 0.00 2.44
3014 3086 4.965283 ATCCCAATTTACCCTCCTCAAA 57.035 40.909 0.00 0.00 0.00 2.69
3015 3087 5.692781 GCATATCCCAATTTACCCTCCTCAA 60.693 44.000 0.00 0.00 0.00 3.02
3016 3088 4.202567 GCATATCCCAATTTACCCTCCTCA 60.203 45.833 0.00 0.00 0.00 3.86
3017 3089 4.043435 AGCATATCCCAATTTACCCTCCTC 59.957 45.833 0.00 0.00 0.00 3.71
3018 3090 3.990245 AGCATATCCCAATTTACCCTCCT 59.010 43.478 0.00 0.00 0.00 3.69
3019 3091 4.082125 CAGCATATCCCAATTTACCCTCC 58.918 47.826 0.00 0.00 0.00 4.30
3020 3092 4.985538 TCAGCATATCCCAATTTACCCTC 58.014 43.478 0.00 0.00 0.00 4.30
3021 3093 5.605540 ATCAGCATATCCCAATTTACCCT 57.394 39.130 0.00 0.00 0.00 4.34
3022 3094 6.670695 AAATCAGCATATCCCAATTTACCC 57.329 37.500 0.00 0.00 0.00 3.69
3056 3128 1.479709 CATATCCCACCCCGCAAAAA 58.520 50.000 0.00 0.00 0.00 1.94
3057 3129 1.040339 GCATATCCCACCCCGCAAAA 61.040 55.000 0.00 0.00 0.00 2.44
3058 3130 1.454847 GCATATCCCACCCCGCAAA 60.455 57.895 0.00 0.00 0.00 3.68
3059 3131 2.194597 GCATATCCCACCCCGCAA 59.805 61.111 0.00 0.00 0.00 4.85
3060 3132 2.772191 AGCATATCCCACCCCGCA 60.772 61.111 0.00 0.00 0.00 5.69
3061 3133 2.281761 CAGCATATCCCACCCCGC 60.282 66.667 0.00 0.00 0.00 6.13
3062 3134 0.401738 ATTCAGCATATCCCACCCCG 59.598 55.000 0.00 0.00 0.00 5.73
3063 3135 2.629617 CAAATTCAGCATATCCCACCCC 59.370 50.000 0.00 0.00 0.00 4.95
3064 3136 2.036346 GCAAATTCAGCATATCCCACCC 59.964 50.000 0.00 0.00 0.00 4.61
3065 3137 2.961062 AGCAAATTCAGCATATCCCACC 59.039 45.455 5.74 0.00 0.00 4.61
3066 3138 3.243636 CCAGCAAATTCAGCATATCCCAC 60.244 47.826 5.74 0.00 0.00 4.61
3067 3139 2.960384 CCAGCAAATTCAGCATATCCCA 59.040 45.455 5.74 0.00 0.00 4.37
3068 3140 2.961062 ACCAGCAAATTCAGCATATCCC 59.039 45.455 5.74 0.00 0.00 3.85
3069 3141 5.766222 CTTACCAGCAAATTCAGCATATCC 58.234 41.667 5.74 0.00 0.00 2.59
3070 3142 5.218139 GCTTACCAGCAAATTCAGCATATC 58.782 41.667 5.74 0.00 46.49 1.63
3071 3143 5.192327 GCTTACCAGCAAATTCAGCATAT 57.808 39.130 5.74 0.00 46.49 1.78
3072 3144 4.637483 GCTTACCAGCAAATTCAGCATA 57.363 40.909 5.74 0.00 46.49 3.14
3073 3145 3.515330 GCTTACCAGCAAATTCAGCAT 57.485 42.857 5.74 0.00 46.49 3.79
3085 3157 6.635030 AGTACCAAAAGAAAAGCTTACCAG 57.365 37.500 0.00 0.00 35.24 4.00
3086 3158 8.700439 ATAAGTACCAAAAGAAAAGCTTACCA 57.300 30.769 0.00 0.00 35.24 3.25
3087 3159 9.011095 AGATAAGTACCAAAAGAAAAGCTTACC 57.989 33.333 0.00 0.00 35.24 2.85
3088 3160 9.827411 CAGATAAGTACCAAAAGAAAAGCTTAC 57.173 33.333 0.00 0.00 35.24 2.34
3089 3161 9.010029 CCAGATAAGTACCAAAAGAAAAGCTTA 57.990 33.333 0.00 0.00 35.24 3.09
3090 3162 7.724061 TCCAGATAAGTACCAAAAGAAAAGCTT 59.276 33.333 0.00 0.00 38.88 3.74
3091 3163 7.231467 TCCAGATAAGTACCAAAAGAAAAGCT 58.769 34.615 0.00 0.00 0.00 3.74
3092 3164 7.448748 TCCAGATAAGTACCAAAAGAAAAGC 57.551 36.000 0.00 0.00 0.00 3.51
3093 3165 9.014297 ACATCCAGATAAGTACCAAAAGAAAAG 57.986 33.333 0.00 0.00 0.00 2.27
3094 3166 8.792633 CACATCCAGATAAGTACCAAAAGAAAA 58.207 33.333 0.00 0.00 0.00 2.29
3095 3167 8.160765 TCACATCCAGATAAGTACCAAAAGAAA 58.839 33.333 0.00 0.00 0.00 2.52
3096 3168 7.606456 GTCACATCCAGATAAGTACCAAAAGAA 59.394 37.037 0.00 0.00 0.00 2.52
3097 3169 7.103641 GTCACATCCAGATAAGTACCAAAAGA 58.896 38.462 0.00 0.00 0.00 2.52
3098 3170 6.036083 CGTCACATCCAGATAAGTACCAAAAG 59.964 42.308 0.00 0.00 0.00 2.27
3099 3171 5.872617 CGTCACATCCAGATAAGTACCAAAA 59.127 40.000 0.00 0.00 0.00 2.44
3100 3172 5.186215 TCGTCACATCCAGATAAGTACCAAA 59.814 40.000 0.00 0.00 0.00 3.28
3101 3173 4.707934 TCGTCACATCCAGATAAGTACCAA 59.292 41.667 0.00 0.00 0.00 3.67
3102 3174 4.274978 TCGTCACATCCAGATAAGTACCA 58.725 43.478 0.00 0.00 0.00 3.25
3103 3175 4.579340 TCTCGTCACATCCAGATAAGTACC 59.421 45.833 0.00 0.00 0.00 3.34
3104 3176 5.752892 TCTCGTCACATCCAGATAAGTAC 57.247 43.478 0.00 0.00 0.00 2.73
3105 3177 6.546034 TCAATCTCGTCACATCCAGATAAGTA 59.454 38.462 0.00 0.00 0.00 2.24
3106 3178 5.360999 TCAATCTCGTCACATCCAGATAAGT 59.639 40.000 0.00 0.00 0.00 2.24
3107 3179 5.836347 TCAATCTCGTCACATCCAGATAAG 58.164 41.667 0.00 0.00 0.00 1.73
3108 3180 5.852282 TCAATCTCGTCACATCCAGATAA 57.148 39.130 0.00 0.00 0.00 1.75
3109 3181 5.302823 ACATCAATCTCGTCACATCCAGATA 59.697 40.000 0.00 0.00 0.00 1.98
3110 3182 4.100653 ACATCAATCTCGTCACATCCAGAT 59.899 41.667 0.00 0.00 0.00 2.90
3111 3183 3.448660 ACATCAATCTCGTCACATCCAGA 59.551 43.478 0.00 0.00 0.00 3.86
3112 3184 3.790091 ACATCAATCTCGTCACATCCAG 58.210 45.455 0.00 0.00 0.00 3.86
3113 3185 3.734902 CGACATCAATCTCGTCACATCCA 60.735 47.826 0.00 0.00 0.00 3.41
3114 3186 2.791560 CGACATCAATCTCGTCACATCC 59.208 50.000 0.00 0.00 0.00 3.51
3115 3187 3.695816 TCGACATCAATCTCGTCACATC 58.304 45.455 0.00 0.00 0.00 3.06
3116 3188 3.782889 TCGACATCAATCTCGTCACAT 57.217 42.857 0.00 0.00 0.00 3.21
3117 3189 3.569250 TTCGACATCAATCTCGTCACA 57.431 42.857 0.00 0.00 0.00 3.58
3118 3190 4.780324 GCATTTCGACATCAATCTCGTCAC 60.780 45.833 0.00 0.00 0.00 3.67
3119 3191 3.306973 GCATTTCGACATCAATCTCGTCA 59.693 43.478 0.00 0.00 0.00 4.35
3120 3192 3.600235 CGCATTTCGACATCAATCTCGTC 60.600 47.826 0.00 0.00 41.67 4.20
3121 3193 2.282555 CGCATTTCGACATCAATCTCGT 59.717 45.455 0.00 0.00 41.67 4.18
3122 3194 2.347939 CCGCATTTCGACATCAATCTCG 60.348 50.000 0.00 0.00 41.67 4.04
3123 3195 2.032549 CCCGCATTTCGACATCAATCTC 60.033 50.000 0.00 0.00 41.67 2.75
3124 3196 1.942657 CCCGCATTTCGACATCAATCT 59.057 47.619 0.00 0.00 41.67 2.40
3125 3197 1.939934 TCCCGCATTTCGACATCAATC 59.060 47.619 0.00 0.00 41.67 2.67
3126 3198 2.036958 TCCCGCATTTCGACATCAAT 57.963 45.000 0.00 0.00 41.67 2.57
3127 3199 1.466950 GTTCCCGCATTTCGACATCAA 59.533 47.619 0.00 0.00 41.67 2.57
3128 3200 1.083489 GTTCCCGCATTTCGACATCA 58.917 50.000 0.00 0.00 41.67 3.07
3129 3201 0.026285 CGTTCCCGCATTTCGACATC 59.974 55.000 0.00 0.00 41.67 3.06
3130 3202 2.086510 CGTTCCCGCATTTCGACAT 58.913 52.632 0.00 0.00 41.67 3.06
3131 3203 3.556625 CGTTCCCGCATTTCGACA 58.443 55.556 0.00 0.00 41.67 4.35
3141 3213 1.205820 GAAAGAAACCGCGTTCCCG 59.794 57.895 4.92 0.00 37.07 5.14
3142 3214 1.205820 CGAAAGAAACCGCGTTCCC 59.794 57.895 4.92 0.00 0.00 3.97
3143 3215 1.205820 CCGAAAGAAACCGCGTTCC 59.794 57.895 4.92 0.00 0.00 3.62
3144 3216 0.383860 CACCGAAAGAAACCGCGTTC 60.384 55.000 4.92 2.90 0.00 3.95
3145 3217 1.644913 CACCGAAAGAAACCGCGTT 59.355 52.632 4.92 0.00 0.00 4.84
3146 3218 2.248835 CCACCGAAAGAAACCGCGT 61.249 57.895 4.92 0.00 0.00 6.01
3147 3219 1.296056 ATCCACCGAAAGAAACCGCG 61.296 55.000 0.00 0.00 0.00 6.46
3148 3220 0.879090 AATCCACCGAAAGAAACCGC 59.121 50.000 0.00 0.00 0.00 5.68
3149 3221 1.401018 GCAATCCACCGAAAGAAACCG 60.401 52.381 0.00 0.00 0.00 4.44
3150 3222 1.067846 GGCAATCCACCGAAAGAAACC 60.068 52.381 0.00 0.00 0.00 3.27
3151 3223 1.886542 AGGCAATCCACCGAAAGAAAC 59.113 47.619 0.00 0.00 33.74 2.78
3152 3224 2.286365 AGGCAATCCACCGAAAGAAA 57.714 45.000 0.00 0.00 33.74 2.52
3153 3225 3.426787 TTAGGCAATCCACCGAAAGAA 57.573 42.857 0.00 0.00 33.74 2.52
3154 3226 3.426787 TTTAGGCAATCCACCGAAAGA 57.573 42.857 0.00 0.00 29.76 2.52
3155 3227 3.443681 ACATTTAGGCAATCCACCGAAAG 59.556 43.478 0.00 0.00 35.62 2.62
3156 3228 3.426615 ACATTTAGGCAATCCACCGAAA 58.573 40.909 0.00 0.00 36.43 3.46
3157 3229 3.080300 ACATTTAGGCAATCCACCGAA 57.920 42.857 0.00 0.00 33.74 4.30
3158 3230 2.799126 ACATTTAGGCAATCCACCGA 57.201 45.000 0.00 0.00 33.74 4.69
3159 3231 3.866883 AAACATTTAGGCAATCCACCG 57.133 42.857 0.00 0.00 33.74 4.94
3160 3232 6.463995 TGATAAACATTTAGGCAATCCACC 57.536 37.500 0.00 0.00 33.74 4.61
3161 3233 9.066892 TCTATGATAAACATTTAGGCAATCCAC 57.933 33.333 0.00 0.00 40.07 4.02
3162 3234 9.812347 ATCTATGATAAACATTTAGGCAATCCA 57.188 29.630 0.00 0.00 40.07 3.41
3167 3239 8.352201 GCAACATCTATGATAAACATTTAGGCA 58.648 33.333 0.00 0.00 40.07 4.75
3168 3240 8.571336 AGCAACATCTATGATAAACATTTAGGC 58.429 33.333 0.00 0.00 40.07 3.93
3169 3241 9.888878 CAGCAACATCTATGATAAACATTTAGG 57.111 33.333 0.00 0.00 40.07 2.69
3172 3244 9.182214 AGACAGCAACATCTATGATAAACATTT 57.818 29.630 0.00 0.00 40.07 2.32
3173 3245 8.743085 AGACAGCAACATCTATGATAAACATT 57.257 30.769 0.00 0.00 40.07 2.71
3174 3246 9.265901 GTAGACAGCAACATCTATGATAAACAT 57.734 33.333 0.00 0.00 42.39 2.71
3175 3247 7.710907 GGTAGACAGCAACATCTATGATAAACA 59.289 37.037 0.00 0.00 30.35 2.83
3176 3248 7.096023 CGGTAGACAGCAACATCTATGATAAAC 60.096 40.741 0.00 0.00 30.35 2.01
3177 3249 6.923508 CGGTAGACAGCAACATCTATGATAAA 59.076 38.462 0.00 0.00 30.35 1.40
3178 3250 6.040504 ACGGTAGACAGCAACATCTATGATAA 59.959 38.462 0.00 0.00 30.35 1.75
3179 3251 5.535030 ACGGTAGACAGCAACATCTATGATA 59.465 40.000 0.00 0.00 30.35 2.15
3180 3252 4.342378 ACGGTAGACAGCAACATCTATGAT 59.658 41.667 0.00 0.00 30.35 2.45
3181 3253 3.699538 ACGGTAGACAGCAACATCTATGA 59.300 43.478 0.00 0.00 30.35 2.15
3182 3254 4.046938 ACGGTAGACAGCAACATCTATG 57.953 45.455 0.00 0.00 30.35 2.23
3183 3255 4.737855 AACGGTAGACAGCAACATCTAT 57.262 40.909 0.00 0.00 30.35 1.98
3184 3256 4.242475 CAAACGGTAGACAGCAACATCTA 58.758 43.478 0.00 0.00 0.00 1.98
3185 3257 3.067106 CAAACGGTAGACAGCAACATCT 58.933 45.455 0.00 0.00 0.00 2.90
3186 3258 2.412847 GCAAACGGTAGACAGCAACATC 60.413 50.000 0.00 0.00 0.00 3.06
3187 3259 1.535462 GCAAACGGTAGACAGCAACAT 59.465 47.619 0.00 0.00 0.00 2.71
3188 3260 0.941542 GCAAACGGTAGACAGCAACA 59.058 50.000 0.00 0.00 0.00 3.33
3189 3261 0.941542 TGCAAACGGTAGACAGCAAC 59.058 50.000 0.00 0.00 0.00 4.17
3190 3262 1.601903 CTTGCAAACGGTAGACAGCAA 59.398 47.619 0.00 0.00 39.38 3.91
3191 3263 1.225855 CTTGCAAACGGTAGACAGCA 58.774 50.000 0.00 0.00 0.00 4.41
3192 3264 1.226746 ACTTGCAAACGGTAGACAGC 58.773 50.000 0.00 0.00 0.00 4.40
3193 3265 2.869801 TGAACTTGCAAACGGTAGACAG 59.130 45.455 0.00 0.00 0.00 3.51
3194 3266 2.869801 CTGAACTTGCAAACGGTAGACA 59.130 45.455 0.00 0.00 0.00 3.41
3195 3267 3.128349 TCTGAACTTGCAAACGGTAGAC 58.872 45.455 0.00 0.00 0.00 2.59
3196 3268 3.181469 ACTCTGAACTTGCAAACGGTAGA 60.181 43.478 0.00 0.59 0.00 2.59
3197 3269 3.131396 ACTCTGAACTTGCAAACGGTAG 58.869 45.455 0.00 0.00 0.00 3.18
3198 3270 3.188159 ACTCTGAACTTGCAAACGGTA 57.812 42.857 0.00 0.00 0.00 4.02
3199 3271 2.038387 ACTCTGAACTTGCAAACGGT 57.962 45.000 0.00 0.00 0.00 4.83
3200 3272 3.420839 AAACTCTGAACTTGCAAACGG 57.579 42.857 0.00 0.58 0.00 4.44
3201 3273 6.660486 GAATAAACTCTGAACTTGCAAACG 57.340 37.500 0.00 0.00 0.00 3.60


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.