Multiple sequence alignment - TraesCS2D01G560200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G560200 chr2D 100.000 6906 0 0 1 6906 633195214 633202119 0.000000e+00 12754.0
1 TraesCS2D01G560200 chr2D 98.246 57 0 1 6851 6906 573914163 573914107 1.590000e-16 99.0
2 TraesCS2D01G560200 chr2A 95.178 3795 127 25 2729 6505 759307298 759303542 0.000000e+00 5943.0
3 TraesCS2D01G560200 chr2A 87.998 1608 93 37 864 2451 759309230 759307703 0.000000e+00 1808.0
4 TraesCS2D01G560200 chr2A 95.828 767 30 2 102 867 739370147 739370912 0.000000e+00 1238.0
5 TraesCS2D01G560200 chr2A 97.059 340 9 1 102 440 739362257 739362596 7.770000e-159 571.0
6 TraesCS2D01G560200 chr2A 93.923 362 13 5 6548 6906 759303547 759303192 7.880000e-149 538.0
7 TraesCS2D01G560200 chr2A 88.889 297 27 5 2438 2730 759307625 759307331 1.830000e-95 361.0
8 TraesCS2D01G560200 chr2A 96.190 105 4 0 1 105 739327495 739327599 9.210000e-39 172.0
9 TraesCS2D01G560200 chr2A 79.717 212 34 5 6581 6791 16836044 16835841 2.010000e-30 145.0
10 TraesCS2D01G560200 chr2B 93.461 3395 148 38 2729 6090 776398558 776401911 0.000000e+00 4972.0
11 TraesCS2D01G560200 chr2B 90.951 873 48 10 1061 1918 776396770 776397626 0.000000e+00 1146.0
12 TraesCS2D01G560200 chr2B 91.019 824 50 14 1921 2730 776397712 776398525 0.000000e+00 1090.0
13 TraesCS2D01G560200 chr2B 92.583 391 28 1 6510 6900 776403232 776403621 1.680000e-155 560.0
14 TraesCS2D01G560200 chr2B 98.246 57 0 1 6851 6906 689770627 689770571 1.590000e-16 99.0
15 TraesCS2D01G560200 chr2B 89.041 73 8 0 6095 6167 776402013 776402085 2.650000e-14 91.6
16 TraesCS2D01G560200 chr6B 90.012 821 59 8 2988 3790 106540549 106541364 0.000000e+00 1040.0
17 TraesCS2D01G560200 chr6B 88.068 176 20 1 6624 6798 478470178 478470003 2.520000e-49 207.0
18 TraesCS2D01G560200 chr6B 88.623 167 14 2 68 233 523504163 523504001 1.520000e-46 198.0
19 TraesCS2D01G560200 chr6B 94.215 121 7 0 68 188 633853190 633853310 1.180000e-42 185.0
20 TraesCS2D01G560200 chr6B 98.113 53 1 0 6854 6906 72375531 72375479 7.380000e-15 93.5
21 TraesCS2D01G560200 chr6B 100.000 38 0 0 3024 3061 106540517 106540554 3.460000e-08 71.3
22 TraesCS2D01G560200 chr3D 90.213 235 21 2 1 233 557637737 557637503 8.700000e-79 305.0
23 TraesCS2D01G560200 chrUn 90.749 227 17 3 10 233 464268119 464267894 4.050000e-77 300.0
24 TraesCS2D01G560200 chr3B 90.308 227 18 3 10 233 827749021 827748796 1.880000e-75 294.0
25 TraesCS2D01G560200 chr3B 82.759 174 23 6 6620 6789 5597275 5597445 1.550000e-31 148.0
26 TraesCS2D01G560200 chr3B 82.759 174 23 6 6620 6789 5734158 5733988 1.550000e-31 148.0
27 TraesCS2D01G560200 chr3B 83.607 122 19 1 6678 6798 726773300 726773179 5.660000e-21 113.0
28 TraesCS2D01G560200 chr3B 96.552 58 2 0 10 67 827238041 827237984 5.700000e-16 97.1
29 TraesCS2D01G560200 chr3A 84.388 237 27 6 1 233 732360259 732360489 2.510000e-54 224.0
30 TraesCS2D01G560200 chr6D 88.136 177 19 2 6624 6798 310399732 310399556 7.020000e-50 209.0
31 TraesCS2D01G560200 chr6D 92.593 54 3 1 6851 6904 427891440 427891388 7.430000e-10 76.8
32 TraesCS2D01G560200 chr4A 86.264 182 16 6 205 383 162161923 162162098 9.140000e-44 189.0
33 TraesCS2D01G560200 chr1D 86.047 86 12 0 3132 3217 246069917 246070002 7.380000e-15 93.5
34 TraesCS2D01G560200 chr1D 96.296 54 0 2 6852 6904 24773146 24773198 3.430000e-13 87.9
35 TraesCS2D01G560200 chr1B 86.047 86 12 0 3132 3217 332084913 332084828 7.380000e-15 93.5
36 TraesCS2D01G560200 chr1A 86.047 86 12 0 3132 3217 307036635 307036720 7.380000e-15 93.5
37 TraesCS2D01G560200 chr1A 88.158 76 9 0 2962 3037 307036467 307036542 2.650000e-14 91.6
38 TraesCS2D01G560200 chr5B 94.444 54 3 0 6851 6904 314274734 314274787 4.440000e-12 84.2
39 TraesCS2D01G560200 chr5A 83.333 84 13 1 6713 6795 376540363 376540446 7.430000e-10 76.8
40 TraesCS2D01G560200 chr4D 92.308 52 4 0 6851 6902 30526761 30526710 2.670000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G560200 chr2D 633195214 633202119 6905 False 12754.00 12754 100.000 1 6906 1 chr2D.!!$F1 6905
1 TraesCS2D01G560200 chr2A 759303192 759309230 6038 True 2162.50 5943 91.497 864 6906 4 chr2A.!!$R2 6042
2 TraesCS2D01G560200 chr2A 739370147 739370912 765 False 1238.00 1238 95.828 102 867 1 chr2A.!!$F3 765
3 TraesCS2D01G560200 chr2B 776396770 776403621 6851 False 1571.92 4972 91.411 1061 6900 5 chr2B.!!$F1 5839
4 TraesCS2D01G560200 chr6B 106540517 106541364 847 False 555.65 1040 95.006 2988 3790 2 chr6B.!!$F2 802

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
836 837 0.028374 CGTTCGGGCGAAGTGTTTTT 59.972 50.000 0.00 0.0 34.49 1.94 F
1595 1742 0.108396 ATTTTGGCTGTTGGTTGGGC 59.892 50.000 0.00 0.0 0.00 5.36 F
2555 2919 0.033109 GCCCCAATAGCAGGAAGGTT 60.033 55.000 0.00 0.0 0.00 3.50 F
2656 3020 1.079819 ATGGACGTGTTGAGGCGAG 60.080 57.895 0.00 0.0 0.00 5.03 F
2661 3025 1.173444 ACGTGTTGAGGCGAGACTCT 61.173 55.000 7.54 0.0 38.32 3.24 F
4473 4907 0.323725 ACAACCCATCAGCCATCACC 60.324 55.000 0.00 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1704 1851 0.105039 CCTCTAGAATGACCGGCCAC 59.895 60.000 0.00 0.0 0.00 5.01 R
2946 3346 0.956633 CTGCACTGCCAACTCAACAT 59.043 50.000 0.00 0.0 0.00 2.71 R
3672 4093 3.841643 CAGAAGTCACCATGCAAAATCC 58.158 45.455 0.00 0.0 0.00 3.01 R
4406 4837 5.385198 ACCAATTTGGATGACACTAACAGT 58.615 37.500 22.19 0.0 40.96 3.55 R
4560 4994 7.201626 GCAGCCATAAATTAAATTGCATTCACA 60.202 33.333 0.00 0.0 0.00 3.58 R
6173 6717 0.109272 CAGTCGCGGAGTACACACAT 60.109 55.000 6.13 0.0 0.00 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.388547 TGTGTTGGGAAGTGACAAGC 58.611 50.000 0.00 0.00 0.00 4.01
21 22 2.171659 TGTGTTGGGAAGTGACAAGCTA 59.828 45.455 0.00 0.00 0.00 3.32
22 23 3.211045 GTGTTGGGAAGTGACAAGCTAA 58.789 45.455 0.00 0.00 0.00 3.09
23 24 3.003378 GTGTTGGGAAGTGACAAGCTAAC 59.997 47.826 0.00 0.00 0.00 2.34
24 25 2.163818 TGGGAAGTGACAAGCTAACG 57.836 50.000 0.00 0.00 0.00 3.18
43 44 4.643795 GCAGATTGCAGGCAGGTA 57.356 55.556 0.00 0.00 44.26 3.08
44 45 2.401967 GCAGATTGCAGGCAGGTAG 58.598 57.895 0.00 0.00 44.26 3.18
45 46 0.107508 GCAGATTGCAGGCAGGTAGA 60.108 55.000 0.00 0.00 44.26 2.59
46 47 1.476471 GCAGATTGCAGGCAGGTAGAT 60.476 52.381 0.00 0.00 44.26 1.98
47 48 2.224378 GCAGATTGCAGGCAGGTAGATA 60.224 50.000 0.00 0.00 44.26 1.98
48 49 3.661944 CAGATTGCAGGCAGGTAGATAG 58.338 50.000 0.00 0.00 0.00 2.08
49 50 2.038295 AGATTGCAGGCAGGTAGATAGC 59.962 50.000 0.00 0.00 0.00 2.97
55 56 1.373059 GCAGGTAGATAGCCAGGGC 59.627 63.158 0.97 0.97 42.33 5.19
56 57 2.062070 CAGGTAGATAGCCAGGGCC 58.938 63.158 6.70 0.00 43.17 5.80
57 58 1.534235 AGGTAGATAGCCAGGGCCG 60.534 63.158 6.70 0.00 43.17 6.13
58 59 2.584391 GGTAGATAGCCAGGGCCGG 61.584 68.421 6.70 9.66 43.17 6.13
75 76 4.465512 GCCATGCCGACAACGCTG 62.466 66.667 0.00 0.00 38.29 5.18
76 77 4.465512 CCATGCCGACAACGCTGC 62.466 66.667 0.00 0.00 38.29 5.25
77 78 3.725459 CATGCCGACAACGCTGCA 61.725 61.111 0.00 0.00 39.85 4.41
78 79 3.425713 ATGCCGACAACGCTGCAG 61.426 61.111 10.11 10.11 39.21 4.41
90 91 4.624364 CTGCAGCGGTGACACCCA 62.624 66.667 20.69 9.81 33.75 4.51
91 92 4.927782 TGCAGCGGTGACACCCAC 62.928 66.667 20.69 11.35 44.95 4.61
93 94 4.293648 CAGCGGTGACACCCACGA 62.294 66.667 19.11 0.00 46.62 4.35
94 95 3.991051 AGCGGTGACACCCACGAG 61.991 66.667 19.11 5.59 46.62 4.18
95 96 3.986006 GCGGTGACACCCACGAGA 61.986 66.667 19.11 0.00 46.62 4.04
96 97 2.732016 CGGTGACACCCACGAGAA 59.268 61.111 19.11 0.00 46.62 2.87
97 98 1.372997 CGGTGACACCCACGAGAAG 60.373 63.158 19.11 0.00 46.62 2.85
98 99 1.802337 CGGTGACACCCACGAGAAGA 61.802 60.000 19.11 0.00 46.62 2.87
99 100 0.038159 GGTGACACCCACGAGAAGAG 60.038 60.000 14.16 0.00 46.62 2.85
100 101 0.038159 GTGACACCCACGAGAAGAGG 60.038 60.000 0.00 0.00 35.86 3.69
186 187 1.429423 GCCGCCATGCTTGTACTTC 59.571 57.895 0.00 0.00 0.00 3.01
187 188 1.026718 GCCGCCATGCTTGTACTTCT 61.027 55.000 0.00 0.00 0.00 2.85
188 189 1.009829 CCGCCATGCTTGTACTTCTC 58.990 55.000 0.00 0.00 0.00 2.87
189 190 1.009829 CGCCATGCTTGTACTTCTCC 58.990 55.000 0.00 0.00 0.00 3.71
190 191 1.383523 GCCATGCTTGTACTTCTCCC 58.616 55.000 0.00 0.00 0.00 4.30
191 192 2.019156 GCCATGCTTGTACTTCTCCCC 61.019 57.143 0.00 0.00 0.00 4.81
192 193 1.281867 CCATGCTTGTACTTCTCCCCA 59.718 52.381 0.00 0.00 0.00 4.96
193 194 2.359900 CATGCTTGTACTTCTCCCCAC 58.640 52.381 0.00 0.00 0.00 4.61
194 195 0.320374 TGCTTGTACTTCTCCCCACG 59.680 55.000 0.00 0.00 0.00 4.94
195 196 1.019805 GCTTGTACTTCTCCCCACGC 61.020 60.000 0.00 0.00 0.00 5.34
196 197 0.608640 CTTGTACTTCTCCCCACGCT 59.391 55.000 0.00 0.00 0.00 5.07
197 198 0.606604 TTGTACTTCTCCCCACGCTC 59.393 55.000 0.00 0.00 0.00 5.03
198 199 1.139095 GTACTTCTCCCCACGCTCG 59.861 63.158 0.00 0.00 0.00 5.03
199 200 1.001764 TACTTCTCCCCACGCTCGA 60.002 57.895 0.00 0.00 0.00 4.04
200 201 1.030488 TACTTCTCCCCACGCTCGAG 61.030 60.000 8.45 8.45 0.00 4.04
201 202 3.708220 CTTCTCCCCACGCTCGAGC 62.708 68.421 27.64 27.64 37.78 5.03
218 219 4.832608 CCACCGCCGCCTTCCTAC 62.833 72.222 0.00 0.00 0.00 3.18
224 225 3.515286 CCGCCTTCCTACGCTCGA 61.515 66.667 0.00 0.00 0.00 4.04
225 226 2.024871 CGCCTTCCTACGCTCGAG 59.975 66.667 8.45 8.45 0.00 4.04
226 227 2.413765 GCCTTCCTACGCTCGAGG 59.586 66.667 15.58 6.97 35.17 4.63
227 228 2.413765 CCTTCCTACGCTCGAGGC 59.586 66.667 15.58 5.67 33.73 4.70
228 229 2.413765 CTTCCTACGCTCGAGGCC 59.586 66.667 15.58 0.00 37.74 5.19
229 230 3.471244 CTTCCTACGCTCGAGGCCG 62.471 68.421 15.58 12.66 37.74 6.13
254 255 4.415332 TCGACAAGCGAGCGTCCC 62.415 66.667 0.00 0.00 45.59 4.46
255 256 4.421479 CGACAAGCGAGCGTCCCT 62.421 66.667 0.00 0.00 44.57 4.20
256 257 2.811317 GACAAGCGAGCGTCCCTG 60.811 66.667 0.00 0.00 0.00 4.45
264 265 3.077556 AGCGTCCCTGCTAGGTGG 61.078 66.667 0.00 0.00 45.14 4.61
265 266 4.840005 GCGTCCCTGCTAGGTGGC 62.840 72.222 0.00 0.00 31.93 5.01
266 267 4.514577 CGTCCCTGCTAGGTGGCG 62.515 72.222 0.00 0.00 31.93 5.69
267 268 4.840005 GTCCCTGCTAGGTGGCGC 62.840 72.222 0.00 0.00 31.93 6.53
270 271 4.880537 CCTGCTAGGTGGCGCGAG 62.881 72.222 12.10 0.00 34.52 5.03
298 299 3.408851 GTCGGTTTGGACGGCGAC 61.409 66.667 16.62 7.58 34.80 5.19
310 311 4.500116 GGCGACGCAGAGGAGACC 62.500 72.222 23.09 0.00 0.00 3.85
311 312 4.838486 GCGACGCAGAGGAGACCG 62.838 72.222 16.42 0.00 0.00 4.79
312 313 3.432588 CGACGCAGAGGAGACCGT 61.433 66.667 0.00 0.00 36.53 4.83
313 314 2.486042 GACGCAGAGGAGACCGTC 59.514 66.667 0.00 0.00 42.39 4.79
314 315 2.282251 ACGCAGAGGAGACCGTCA 60.282 61.111 0.40 0.00 0.00 4.35
315 316 1.863662 GACGCAGAGGAGACCGTCAA 61.864 60.000 0.40 0.00 46.57 3.18
316 317 1.153939 CGCAGAGGAGACCGTCAAG 60.154 63.158 0.40 0.00 0.00 3.02
317 318 1.446966 GCAGAGGAGACCGTCAAGC 60.447 63.158 0.40 0.00 0.00 4.01
318 319 1.216710 CAGAGGAGACCGTCAAGCC 59.783 63.158 0.40 0.00 0.00 4.35
319 320 1.077625 AGAGGAGACCGTCAAGCCT 59.922 57.895 0.40 4.42 0.00 4.58
320 321 0.968393 AGAGGAGACCGTCAAGCCTC 60.968 60.000 19.58 19.58 44.24 4.70
321 322 1.950973 GAGGAGACCGTCAAGCCTCC 61.951 65.000 17.73 8.96 44.14 4.30
322 323 2.283529 GGAGACCGTCAAGCCTCCA 61.284 63.158 0.40 0.00 43.47 3.86
323 324 1.079750 GAGACCGTCAAGCCTCCAC 60.080 63.158 0.40 0.00 0.00 4.02
324 325 2.432628 GACCGTCAAGCCTCCACG 60.433 66.667 0.00 0.00 0.00 4.94
325 326 4.681978 ACCGTCAAGCCTCCACGC 62.682 66.667 0.00 0.00 32.03 5.34
347 348 3.609703 GCTCCCTGCGAGAGAGAA 58.390 61.111 1.93 0.00 41.63 2.87
348 349 1.437160 GCTCCCTGCGAGAGAGAAG 59.563 63.158 1.93 0.00 41.63 2.85
349 350 1.437160 CTCCCTGCGAGAGAGAAGC 59.563 63.158 0.00 0.00 41.63 3.86
350 351 1.000270 TCCCTGCGAGAGAGAAGCT 60.000 57.895 0.00 0.00 0.00 3.74
351 352 1.034838 TCCCTGCGAGAGAGAAGCTC 61.035 60.000 0.00 0.00 44.29 4.09
352 353 1.437160 CCTGCGAGAGAGAAGCTCC 59.563 63.158 0.00 0.00 45.10 4.70
353 354 1.437160 CTGCGAGAGAGAAGCTCCC 59.563 63.158 0.00 0.00 45.10 4.30
354 355 2.335052 CTGCGAGAGAGAAGCTCCCG 62.335 65.000 0.00 0.00 46.30 5.14
355 356 2.115911 GCGAGAGAGAAGCTCCCGA 61.116 63.158 0.61 0.00 46.46 5.14
356 357 2.021722 CGAGAGAGAAGCTCCCGAG 58.978 63.158 0.00 0.00 46.46 4.63
357 358 2.058829 CGAGAGAGAAGCTCCCGAGC 62.059 65.000 8.70 8.70 46.46 5.03
365 366 4.838486 GCTCCCGAGCGACAGTCG 62.838 72.222 19.10 19.10 45.29 4.18
374 375 2.338620 CGACAGTCGCACCCTCAA 59.661 61.111 10.66 0.00 31.14 3.02
375 376 1.300620 CGACAGTCGCACCCTCAAA 60.301 57.895 10.66 0.00 31.14 2.69
376 377 1.284982 CGACAGTCGCACCCTCAAAG 61.285 60.000 10.66 0.00 31.14 2.77
377 378 1.569479 GACAGTCGCACCCTCAAAGC 61.569 60.000 0.00 0.00 0.00 3.51
378 379 2.032681 AGTCGCACCCTCAAAGCC 59.967 61.111 0.00 0.00 0.00 4.35
379 380 3.056328 GTCGCACCCTCAAAGCCC 61.056 66.667 0.00 0.00 0.00 5.19
380 381 4.344865 TCGCACCCTCAAAGCCCC 62.345 66.667 0.00 0.00 0.00 5.80
395 396 2.367784 CCCCCTACCCACCCGATT 60.368 66.667 0.00 0.00 0.00 3.34
396 397 2.004693 CCCCCTACCCACCCGATTT 61.005 63.158 0.00 0.00 0.00 2.17
397 398 1.530283 CCCCTACCCACCCGATTTC 59.470 63.158 0.00 0.00 0.00 2.17
398 399 1.530283 CCCTACCCACCCGATTTCC 59.470 63.158 0.00 0.00 0.00 3.13
399 400 1.145377 CCTACCCACCCGATTTCCG 59.855 63.158 0.00 0.00 38.18 4.30
400 401 1.523032 CTACCCACCCGATTTCCGC 60.523 63.158 0.00 0.00 36.84 5.54
401 402 1.968050 CTACCCACCCGATTTCCGCT 61.968 60.000 0.00 0.00 36.84 5.52
402 403 1.963464 TACCCACCCGATTTCCGCTC 61.963 60.000 0.00 0.00 36.84 5.03
403 404 2.890474 CCACCCGATTTCCGCTCG 60.890 66.667 0.00 0.00 36.84 5.03
404 405 3.564027 CACCCGATTTCCGCTCGC 61.564 66.667 0.00 0.00 36.84 5.03
405 406 4.832608 ACCCGATTTCCGCTCGCC 62.833 66.667 0.00 0.00 36.84 5.54
409 410 4.176752 GATTTCCGCTCGCCCCCT 62.177 66.667 0.00 0.00 0.00 4.79
410 411 4.489771 ATTTCCGCTCGCCCCCTG 62.490 66.667 0.00 0.00 0.00 4.45
442 443 4.082523 CGACGGTGAGGTGCCCAT 62.083 66.667 0.00 0.00 0.00 4.00
443 444 2.436646 GACGGTGAGGTGCCCATG 60.437 66.667 0.00 0.00 0.00 3.66
444 445 3.976701 GACGGTGAGGTGCCCATGG 62.977 68.421 4.14 4.14 0.00 3.66
445 446 3.716195 CGGTGAGGTGCCCATGGA 61.716 66.667 15.22 0.00 0.00 3.41
446 447 3.010144 GGTGAGGTGCCCATGGAT 58.990 61.111 15.22 0.00 0.00 3.41
447 448 1.454479 GGTGAGGTGCCCATGGATG 60.454 63.158 15.22 0.00 0.00 3.51
448 449 2.123428 GTGAGGTGCCCATGGATGC 61.123 63.158 15.22 9.96 0.00 3.91
449 450 2.903855 GAGGTGCCCATGGATGCG 60.904 66.667 15.22 0.00 0.00 4.73
472 473 2.124695 GGGACGGGCATGGTTCTC 60.125 66.667 0.00 0.00 0.00 2.87
473 474 2.124695 GGACGGGCATGGTTCTCC 60.125 66.667 0.00 0.00 0.00 3.71
474 475 2.670148 GGACGGGCATGGTTCTCCT 61.670 63.158 0.00 0.00 34.23 3.69
475 476 1.450312 GACGGGCATGGTTCTCCTG 60.450 63.158 0.00 0.00 34.23 3.86
476 477 2.825836 CGGGCATGGTTCTCCTGC 60.826 66.667 0.00 0.00 37.24 4.85
477 478 2.679716 GGGCATGGTTCTCCTGCT 59.320 61.111 0.00 0.00 37.71 4.24
478 479 1.452833 GGGCATGGTTCTCCTGCTC 60.453 63.158 0.00 0.00 37.71 4.26
479 480 1.817099 GGCATGGTTCTCCTGCTCG 60.817 63.158 0.00 0.00 37.71 5.03
480 481 2.467826 GCATGGTTCTCCTGCTCGC 61.468 63.158 0.00 0.00 36.05 5.03
481 482 2.169789 CATGGTTCTCCTGCTCGCG 61.170 63.158 0.00 0.00 34.23 5.87
482 483 4.742201 TGGTTCTCCTGCTCGCGC 62.742 66.667 0.00 0.00 34.23 6.86
485 486 4.778415 TTCTCCTGCTCGCGCGTC 62.778 66.667 30.98 22.20 39.65 5.19
490 491 4.607606 CTGCTCGCGCGTCCGATA 62.608 66.667 30.98 8.24 39.65 2.92
491 492 4.607606 TGCTCGCGCGTCCGATAG 62.608 66.667 30.98 19.40 39.65 2.08
518 519 4.803426 GAGCACCTCCACGCTCGG 62.803 72.222 0.00 0.00 44.68 4.63
539 540 3.721706 GACAGGGCCAGGTGGGAG 61.722 72.222 6.18 0.00 40.01 4.30
570 571 4.742201 CGGTCGGTGAGCAGGGTG 62.742 72.222 0.00 0.00 0.00 4.61
571 572 3.626924 GGTCGGTGAGCAGGGTGT 61.627 66.667 0.00 0.00 0.00 4.16
572 573 2.280552 GGTCGGTGAGCAGGGTGTA 61.281 63.158 0.00 0.00 0.00 2.90
573 574 1.614241 GGTCGGTGAGCAGGGTGTAT 61.614 60.000 0.00 0.00 0.00 2.29
574 575 0.460284 GTCGGTGAGCAGGGTGTATG 60.460 60.000 0.00 0.00 0.00 2.39
575 576 1.153369 CGGTGAGCAGGGTGTATGG 60.153 63.158 0.00 0.00 0.00 2.74
576 577 1.452108 GGTGAGCAGGGTGTATGGC 60.452 63.158 0.00 0.00 0.00 4.40
577 578 1.452108 GTGAGCAGGGTGTATGGCC 60.452 63.158 0.00 0.00 0.00 5.36
578 579 2.203070 GAGCAGGGTGTATGGCCG 60.203 66.667 0.00 0.00 0.00 6.13
579 580 4.489771 AGCAGGGTGTATGGCCGC 62.490 66.667 0.00 0.00 0.00 6.53
581 582 4.155733 CAGGGTGTATGGCCGCGA 62.156 66.667 8.23 0.00 0.00 5.87
582 583 4.157120 AGGGTGTATGGCCGCGAC 62.157 66.667 8.23 0.00 0.00 5.19
597 598 2.032071 GACCGGTGGTCCAAGGTG 59.968 66.667 21.35 1.83 46.19 4.00
598 599 3.546714 GACCGGTGGTCCAAGGTGG 62.547 68.421 21.35 10.77 46.19 4.61
599 600 3.246112 CCGGTGGTCCAAGGTGGA 61.246 66.667 0.00 0.00 45.98 4.02
606 607 2.431683 TCCAAGGTGGAGCTGCAC 59.568 61.111 28.46 28.46 42.67 4.57
607 608 3.052082 CCAAGGTGGAGCTGCACG 61.052 66.667 28.93 16.89 40.96 5.34
608 609 3.052082 CAAGGTGGAGCTGCACGG 61.052 66.667 28.93 18.26 0.00 4.94
609 610 4.335647 AAGGTGGAGCTGCACGGG 62.336 66.667 28.93 0.00 0.00 5.28
629 630 4.271816 CGGTGAGATCCGCGGGAG 62.272 72.222 27.83 0.00 43.96 4.30
630 631 3.917760 GGTGAGATCCGCGGGAGG 61.918 72.222 27.83 0.00 34.05 4.30
631 632 2.833582 GTGAGATCCGCGGGAGGA 60.834 66.667 27.83 5.87 45.54 3.71
632 633 2.043349 TGAGATCCGCGGGAGGAA 60.043 61.111 27.83 5.39 44.50 3.36
633 634 2.127869 TGAGATCCGCGGGAGGAAG 61.128 63.158 27.83 0.00 44.50 3.46
634 635 1.828660 GAGATCCGCGGGAGGAAGA 60.829 63.158 27.83 3.54 44.50 2.87
635 636 1.801309 GAGATCCGCGGGAGGAAGAG 61.801 65.000 27.83 0.00 44.50 2.85
636 637 1.828660 GATCCGCGGGAGGAAGAGA 60.829 63.158 27.83 1.69 44.50 3.10
637 638 1.801309 GATCCGCGGGAGGAAGAGAG 61.801 65.000 27.83 0.00 44.50 3.20
638 639 2.285889 ATCCGCGGGAGGAAGAGAGA 62.286 60.000 27.83 0.12 44.50 3.10
639 640 2.485795 CCGCGGGAGGAAGAGAGAG 61.486 68.421 20.10 0.00 0.00 3.20
640 641 1.452289 CGCGGGAGGAAGAGAGAGA 60.452 63.158 0.00 0.00 0.00 3.10
641 642 1.032657 CGCGGGAGGAAGAGAGAGAA 61.033 60.000 0.00 0.00 0.00 2.87
642 643 0.744281 GCGGGAGGAAGAGAGAGAAG 59.256 60.000 0.00 0.00 0.00 2.85
643 644 1.683629 GCGGGAGGAAGAGAGAGAAGA 60.684 57.143 0.00 0.00 0.00 2.87
644 645 2.944129 CGGGAGGAAGAGAGAGAAGAT 58.056 52.381 0.00 0.00 0.00 2.40
645 646 2.622942 CGGGAGGAAGAGAGAGAAGATG 59.377 54.545 0.00 0.00 0.00 2.90
646 647 3.686978 CGGGAGGAAGAGAGAGAAGATGA 60.687 52.174 0.00 0.00 0.00 2.92
647 648 4.482990 GGGAGGAAGAGAGAGAAGATGAT 58.517 47.826 0.00 0.00 0.00 2.45
648 649 4.281688 GGGAGGAAGAGAGAGAAGATGATG 59.718 50.000 0.00 0.00 0.00 3.07
649 650 4.281688 GGAGGAAGAGAGAGAAGATGATGG 59.718 50.000 0.00 0.00 0.00 3.51
650 651 5.139727 GAGGAAGAGAGAGAAGATGATGGA 58.860 45.833 0.00 0.00 0.00 3.41
651 652 5.142639 AGGAAGAGAGAGAAGATGATGGAG 58.857 45.833 0.00 0.00 0.00 3.86
652 653 4.895297 GGAAGAGAGAGAAGATGATGGAGT 59.105 45.833 0.00 0.00 0.00 3.85
653 654 5.221303 GGAAGAGAGAGAAGATGATGGAGTG 60.221 48.000 0.00 0.00 0.00 3.51
654 655 4.217510 AGAGAGAGAAGATGATGGAGTGG 58.782 47.826 0.00 0.00 0.00 4.00
655 656 4.079269 AGAGAGAGAAGATGATGGAGTGGA 60.079 45.833 0.00 0.00 0.00 4.02
656 657 4.217510 AGAGAGAAGATGATGGAGTGGAG 58.782 47.826 0.00 0.00 0.00 3.86
657 658 4.079269 AGAGAGAAGATGATGGAGTGGAGA 60.079 45.833 0.00 0.00 0.00 3.71
658 659 4.818447 AGAGAAGATGATGGAGTGGAGAT 58.182 43.478 0.00 0.00 0.00 2.75
659 660 4.834496 AGAGAAGATGATGGAGTGGAGATC 59.166 45.833 0.00 0.00 0.00 2.75
660 661 4.818447 AGAAGATGATGGAGTGGAGATCT 58.182 43.478 0.00 0.00 0.00 2.75
661 662 4.589798 AGAAGATGATGGAGTGGAGATCTG 59.410 45.833 0.00 0.00 0.00 2.90
662 663 2.633967 AGATGATGGAGTGGAGATCTGC 59.366 50.000 7.39 7.39 0.00 4.26
663 664 1.870064 TGATGGAGTGGAGATCTGCA 58.130 50.000 13.58 13.58 37.63 4.41
664 665 1.761198 TGATGGAGTGGAGATCTGCAG 59.239 52.381 18.21 7.63 36.77 4.41
665 666 2.037901 GATGGAGTGGAGATCTGCAGA 58.962 52.381 20.79 20.79 36.77 4.26
666 667 1.482954 TGGAGTGGAGATCTGCAGAG 58.517 55.000 22.96 0.00 0.00 3.35
667 668 1.272928 TGGAGTGGAGATCTGCAGAGT 60.273 52.381 22.96 11.93 0.00 3.24
668 669 1.136695 GGAGTGGAGATCTGCAGAGTG 59.863 57.143 22.96 0.00 0.00 3.51
669 670 2.098614 GAGTGGAGATCTGCAGAGTGA 58.901 52.381 22.96 0.00 0.00 3.41
670 671 2.099592 GAGTGGAGATCTGCAGAGTGAG 59.900 54.545 22.96 0.00 0.00 3.51
671 672 0.822811 TGGAGATCTGCAGAGTGAGC 59.177 55.000 22.96 9.14 0.00 4.26
672 673 1.113788 GGAGATCTGCAGAGTGAGCT 58.886 55.000 22.96 13.15 0.00 4.09
673 674 1.067516 GGAGATCTGCAGAGTGAGCTC 59.932 57.143 22.96 19.70 42.81 4.09
674 675 0.740149 AGATCTGCAGAGTGAGCTCG 59.260 55.000 22.96 0.00 46.03 5.03
675 676 0.737804 GATCTGCAGAGTGAGCTCGA 59.262 55.000 22.96 0.00 46.03 4.04
676 677 0.740149 ATCTGCAGAGTGAGCTCGAG 59.260 55.000 22.96 8.45 46.03 4.04
677 678 0.322008 TCTGCAGAGTGAGCTCGAGA 60.322 55.000 18.75 0.00 46.03 4.04
678 679 0.179166 CTGCAGAGTGAGCTCGAGAC 60.179 60.000 18.75 9.86 46.03 3.36
679 680 0.890996 TGCAGAGTGAGCTCGAGACA 60.891 55.000 18.75 12.57 46.03 3.41
680 681 0.179166 GCAGAGTGAGCTCGAGACAG 60.179 60.000 18.75 4.84 46.03 3.51
681 682 1.447945 CAGAGTGAGCTCGAGACAGA 58.552 55.000 18.75 0.00 46.03 3.41
682 683 1.809547 CAGAGTGAGCTCGAGACAGAA 59.190 52.381 18.75 0.00 46.03 3.02
683 684 2.423185 CAGAGTGAGCTCGAGACAGAAT 59.577 50.000 18.75 4.57 46.03 2.40
684 685 2.423185 AGAGTGAGCTCGAGACAGAATG 59.577 50.000 18.75 0.00 46.03 2.67
685 686 1.476085 AGTGAGCTCGAGACAGAATGG 59.524 52.381 18.75 0.00 43.62 3.16
697 698 2.157738 ACAGAATGGCAGAAAGTGAGC 58.842 47.619 0.00 0.00 43.62 4.26
698 699 1.129998 CAGAATGGCAGAAAGTGAGCG 59.870 52.381 0.00 0.00 0.00 5.03
699 700 0.449388 GAATGGCAGAAAGTGAGCGG 59.551 55.000 0.00 0.00 0.00 5.52
700 701 1.589716 AATGGCAGAAAGTGAGCGGC 61.590 55.000 0.00 0.00 0.00 6.53
701 702 3.793144 GGCAGAAAGTGAGCGGCG 61.793 66.667 0.51 0.51 0.00 6.46
702 703 3.793144 GCAGAAAGTGAGCGGCGG 61.793 66.667 9.78 0.00 0.00 6.13
703 704 2.048222 CAGAAAGTGAGCGGCGGA 60.048 61.111 9.78 0.00 0.00 5.54
704 705 2.097038 CAGAAAGTGAGCGGCGGAG 61.097 63.158 9.78 0.00 0.00 4.63
705 706 2.048127 GAAAGTGAGCGGCGGAGT 60.048 61.111 9.78 0.00 0.00 3.85
706 707 2.357517 AAAGTGAGCGGCGGAGTG 60.358 61.111 9.78 0.00 0.00 3.51
707 708 3.883744 AAAGTGAGCGGCGGAGTGG 62.884 63.158 9.78 0.00 0.00 4.00
709 710 4.148825 GTGAGCGGCGGAGTGGAT 62.149 66.667 9.78 0.00 0.00 3.41
710 711 2.441348 TGAGCGGCGGAGTGGATA 60.441 61.111 9.78 0.00 0.00 2.59
711 712 2.055633 TGAGCGGCGGAGTGGATAA 61.056 57.895 9.78 0.00 0.00 1.75
712 713 1.300233 GAGCGGCGGAGTGGATAAG 60.300 63.158 9.78 0.00 0.00 1.73
713 714 1.735376 GAGCGGCGGAGTGGATAAGA 61.735 60.000 9.78 0.00 0.00 2.10
714 715 1.115930 AGCGGCGGAGTGGATAAGAT 61.116 55.000 9.78 0.00 0.00 2.40
715 716 0.601558 GCGGCGGAGTGGATAAGATA 59.398 55.000 9.78 0.00 0.00 1.98
716 717 1.402984 GCGGCGGAGTGGATAAGATAG 60.403 57.143 9.78 0.00 0.00 2.08
717 718 1.887198 CGGCGGAGTGGATAAGATAGT 59.113 52.381 0.00 0.00 0.00 2.12
718 719 2.095161 CGGCGGAGTGGATAAGATAGTC 60.095 54.545 0.00 0.00 0.00 2.59
719 720 2.095161 GGCGGAGTGGATAAGATAGTCG 60.095 54.545 0.00 0.00 0.00 4.18
720 721 2.553172 GCGGAGTGGATAAGATAGTCGT 59.447 50.000 0.00 0.00 0.00 4.34
721 722 3.365164 GCGGAGTGGATAAGATAGTCGTC 60.365 52.174 0.00 0.00 0.00 4.20
722 723 3.188873 CGGAGTGGATAAGATAGTCGTCC 59.811 52.174 0.00 0.00 0.00 4.79
723 724 3.188873 GGAGTGGATAAGATAGTCGTCCG 59.811 52.174 0.00 0.00 0.00 4.79
724 725 3.147629 AGTGGATAAGATAGTCGTCCGG 58.852 50.000 0.00 0.00 0.00 5.14
725 726 2.883386 GTGGATAAGATAGTCGTCCGGT 59.117 50.000 0.00 0.00 0.00 5.28
726 727 3.058363 GTGGATAAGATAGTCGTCCGGTC 60.058 52.174 0.00 0.00 0.00 4.79
727 728 2.159234 GGATAAGATAGTCGTCCGGTCG 59.841 54.545 15.22 15.22 0.00 4.79
728 729 2.315925 TAAGATAGTCGTCCGGTCGT 57.684 50.000 20.21 5.25 0.00 4.34
729 730 0.731417 AAGATAGTCGTCCGGTCGTG 59.269 55.000 20.21 0.00 0.00 4.35
730 731 1.298190 GATAGTCGTCCGGTCGTGC 60.298 63.158 20.21 14.10 0.00 5.34
731 732 1.712977 GATAGTCGTCCGGTCGTGCT 61.713 60.000 20.21 19.55 0.00 4.40
732 733 1.310933 ATAGTCGTCCGGTCGTGCTT 61.311 55.000 20.21 7.61 0.00 3.91
733 734 1.915614 TAGTCGTCCGGTCGTGCTTC 61.916 60.000 20.21 7.67 0.00 3.86
734 735 4.394078 TCGTCCGGTCGTGCTTCG 62.394 66.667 20.21 5.15 41.41 3.79
735 736 4.695231 CGTCCGGTCGTGCTTCGT 62.695 66.667 13.16 0.00 40.80 3.85
736 737 2.355481 GTCCGGTCGTGCTTCGTT 60.355 61.111 0.00 0.00 40.80 3.85
737 738 2.049802 TCCGGTCGTGCTTCGTTC 60.050 61.111 0.00 0.00 40.80 3.95
738 739 2.355363 CCGGTCGTGCTTCGTTCA 60.355 61.111 0.00 0.00 40.80 3.18
739 740 2.372690 CCGGTCGTGCTTCGTTCAG 61.373 63.158 0.00 0.00 40.80 3.02
740 741 2.853914 GGTCGTGCTTCGTTCAGC 59.146 61.111 2.39 0.00 40.55 4.26
741 742 2.668280 GGTCGTGCTTCGTTCAGCC 61.668 63.158 2.33 0.00 39.25 4.85
742 743 2.357034 TCGTGCTTCGTTCAGCCC 60.357 61.111 2.33 0.00 39.25 5.19
743 744 3.777925 CGTGCTTCGTTCAGCCCG 61.778 66.667 2.33 0.00 39.25 6.13
744 745 2.357034 GTGCTTCGTTCAGCCCGA 60.357 61.111 2.33 0.00 39.25 5.14
745 746 1.959226 GTGCTTCGTTCAGCCCGAA 60.959 57.895 0.00 0.00 41.60 4.30
746 747 1.003839 TGCTTCGTTCAGCCCGAAT 60.004 52.632 0.00 0.00 42.74 3.34
747 748 1.298157 TGCTTCGTTCAGCCCGAATG 61.298 55.000 0.00 0.24 42.74 2.67
748 749 1.425428 CTTCGTTCAGCCCGAATGC 59.575 57.895 0.00 0.00 42.74 3.56
749 750 1.982073 CTTCGTTCAGCCCGAATGCC 61.982 60.000 0.00 0.00 42.74 4.40
750 751 3.508840 CGTTCAGCCCGAATGCCC 61.509 66.667 0.00 0.00 35.63 5.36
751 752 2.361104 GTTCAGCCCGAATGCCCA 60.361 61.111 0.00 0.00 35.63 5.36
752 753 2.361104 TTCAGCCCGAATGCCCAC 60.361 61.111 0.00 0.00 0.00 4.61
753 754 3.203086 TTCAGCCCGAATGCCCACA 62.203 57.895 0.00 0.00 0.00 4.17
754 755 2.676121 CAGCCCGAATGCCCACAA 60.676 61.111 0.00 0.00 0.00 3.33
755 756 2.117206 AGCCCGAATGCCCACAAA 59.883 55.556 0.00 0.00 0.00 2.83
756 757 1.532794 AGCCCGAATGCCCACAAAA 60.533 52.632 0.00 0.00 0.00 2.44
757 758 1.374125 GCCCGAATGCCCACAAAAC 60.374 57.895 0.00 0.00 0.00 2.43
758 759 2.045280 CCCGAATGCCCACAAAACA 58.955 52.632 0.00 0.00 0.00 2.83
759 760 0.607620 CCCGAATGCCCACAAAACAT 59.392 50.000 0.00 0.00 0.00 2.71
760 761 1.672441 CCCGAATGCCCACAAAACATG 60.672 52.381 0.00 0.00 0.00 3.21
761 762 1.271934 CCGAATGCCCACAAAACATGA 59.728 47.619 0.00 0.00 0.00 3.07
762 763 2.327568 CGAATGCCCACAAAACATGAC 58.672 47.619 0.00 0.00 0.00 3.06
763 764 2.327568 GAATGCCCACAAAACATGACG 58.672 47.619 0.00 0.00 0.00 4.35
764 765 1.327303 ATGCCCACAAAACATGACGT 58.673 45.000 0.00 0.00 0.00 4.34
765 766 0.383590 TGCCCACAAAACATGACGTG 59.616 50.000 0.00 0.62 0.00 4.49
766 767 0.318614 GCCCACAAAACATGACGTGG 60.319 55.000 15.81 15.81 46.93 4.94
767 768 0.318614 CCCACAAAACATGACGTGGC 60.319 55.000 16.77 0.00 46.19 5.01
768 769 0.383590 CCACAAAACATGACGTGGCA 59.616 50.000 0.00 0.00 42.24 4.92
769 770 1.202348 CCACAAAACATGACGTGGCAA 60.202 47.619 0.00 0.00 42.24 4.52
770 771 1.851666 CACAAAACATGACGTGGCAAC 59.148 47.619 0.00 0.00 0.00 4.17
771 772 1.202359 ACAAAACATGACGTGGCAACC 60.202 47.619 0.00 0.00 0.00 3.77
772 773 0.030101 AAAACATGACGTGGCAACCG 59.970 50.000 0.00 0.00 36.50 4.44
773 774 2.400896 AAACATGACGTGGCAACCGC 62.401 55.000 0.00 0.00 34.20 5.68
774 775 3.049674 CATGACGTGGCAACCGCT 61.050 61.111 0.00 0.00 38.60 5.52
775 776 2.742372 ATGACGTGGCAACCGCTC 60.742 61.111 0.00 0.00 38.60 5.03
776 777 4.980805 TGACGTGGCAACCGCTCC 62.981 66.667 0.00 0.00 38.60 4.70
783 784 2.744709 GCAACCGCTCCCGCTTTA 60.745 61.111 0.00 0.00 34.30 1.85
784 785 2.329614 GCAACCGCTCCCGCTTTAA 61.330 57.895 0.00 0.00 34.30 1.52
785 786 1.858372 GCAACCGCTCCCGCTTTAAA 61.858 55.000 0.00 0.00 34.30 1.52
786 787 0.594110 CAACCGCTCCCGCTTTAAAA 59.406 50.000 0.00 0.00 0.00 1.52
787 788 1.001158 CAACCGCTCCCGCTTTAAAAA 60.001 47.619 0.00 0.00 0.00 1.94
788 789 1.541379 ACCGCTCCCGCTTTAAAAAT 58.459 45.000 0.00 0.00 0.00 1.82
789 790 1.471287 ACCGCTCCCGCTTTAAAAATC 59.529 47.619 0.00 0.00 0.00 2.17
790 791 1.531058 CCGCTCCCGCTTTAAAAATCG 60.531 52.381 0.00 0.00 0.00 3.34
791 792 1.545759 GCTCCCGCTTTAAAAATCGC 58.454 50.000 0.00 0.00 0.00 4.58
792 793 1.135517 GCTCCCGCTTTAAAAATCGCA 60.136 47.619 0.00 0.00 0.00 5.10
793 794 2.669950 GCTCCCGCTTTAAAAATCGCAA 60.670 45.455 0.00 0.00 0.00 4.85
794 795 3.570559 CTCCCGCTTTAAAAATCGCAAA 58.429 40.909 0.00 0.00 0.00 3.68
795 796 4.173256 CTCCCGCTTTAAAAATCGCAAAT 58.827 39.130 0.00 0.00 0.00 2.32
796 797 4.170256 TCCCGCTTTAAAAATCGCAAATC 58.830 39.130 0.00 0.00 0.00 2.17
797 798 3.001168 CCCGCTTTAAAAATCGCAAATCG 60.001 43.478 0.00 0.00 40.15 3.34
798 799 3.539401 CCGCTTTAAAAATCGCAAATCGC 60.539 43.478 0.00 0.00 38.27 4.58
807 808 3.025619 GCAAATCGCGATGGAGGG 58.974 61.111 24.47 11.43 0.00 4.30
808 809 1.819632 GCAAATCGCGATGGAGGGT 60.820 57.895 24.47 1.93 0.00 4.34
809 810 2.016961 CAAATCGCGATGGAGGGTG 58.983 57.895 24.47 10.16 0.00 4.61
810 811 0.461870 CAAATCGCGATGGAGGGTGA 60.462 55.000 24.47 0.00 0.00 4.02
811 812 0.469917 AAATCGCGATGGAGGGTGAT 59.530 50.000 24.47 0.00 35.04 3.06
812 813 0.250038 AATCGCGATGGAGGGTGATG 60.250 55.000 24.47 0.00 33.93 3.07
813 814 2.104572 ATCGCGATGGAGGGTGATGG 62.105 60.000 23.04 0.00 32.52 3.51
814 815 2.796193 CGCGATGGAGGGTGATGGA 61.796 63.158 0.00 0.00 0.00 3.41
815 816 1.526887 GCGATGGAGGGTGATGGAA 59.473 57.895 0.00 0.00 0.00 3.53
816 817 0.533755 GCGATGGAGGGTGATGGAAG 60.534 60.000 0.00 0.00 0.00 3.46
817 818 0.533755 CGATGGAGGGTGATGGAAGC 60.534 60.000 0.00 0.00 0.00 3.86
818 819 0.533755 GATGGAGGGTGATGGAAGCG 60.534 60.000 0.00 0.00 0.00 4.68
819 820 1.274703 ATGGAGGGTGATGGAAGCGT 61.275 55.000 0.00 0.00 0.00 5.07
820 821 1.299976 GGAGGGTGATGGAAGCGTT 59.700 57.895 0.00 0.00 0.00 4.84
821 822 0.744771 GGAGGGTGATGGAAGCGTTC 60.745 60.000 0.00 0.00 0.00 3.95
822 823 1.079127 AGGGTGATGGAAGCGTTCG 60.079 57.895 0.00 0.00 0.00 3.95
823 824 2.106683 GGGTGATGGAAGCGTTCGG 61.107 63.158 0.00 0.00 0.00 4.30
824 825 2.106683 GGTGATGGAAGCGTTCGGG 61.107 63.158 0.00 0.00 0.00 5.14
825 826 2.435938 TGATGGAAGCGTTCGGGC 60.436 61.111 0.00 0.00 0.00 6.13
826 827 3.564027 GATGGAAGCGTTCGGGCG 61.564 66.667 0.00 0.00 38.18 6.13
827 828 4.077184 ATGGAAGCGTTCGGGCGA 62.077 61.111 3.88 0.00 38.18 5.54
828 829 3.599285 ATGGAAGCGTTCGGGCGAA 62.599 57.895 3.88 0.00 38.18 4.70
829 830 3.488090 GGAAGCGTTCGGGCGAAG 61.488 66.667 0.00 0.00 38.18 3.79
830 831 2.737376 GAAGCGTTCGGGCGAAGT 60.737 61.111 0.00 0.00 38.18 3.01
831 832 3.011760 GAAGCGTTCGGGCGAAGTG 62.012 63.158 0.00 0.00 38.18 3.16
832 833 3.802418 AAGCGTTCGGGCGAAGTGT 62.802 57.895 0.00 0.00 38.18 3.55
833 834 3.343421 GCGTTCGGGCGAAGTGTT 61.343 61.111 0.00 0.00 34.49 3.32
834 835 2.888998 GCGTTCGGGCGAAGTGTTT 61.889 57.895 0.00 0.00 34.49 2.83
835 836 1.644913 CGTTCGGGCGAAGTGTTTT 59.355 52.632 0.00 0.00 34.49 2.43
836 837 0.028374 CGTTCGGGCGAAGTGTTTTT 59.972 50.000 0.00 0.00 34.49 1.94
837 838 1.472990 GTTCGGGCGAAGTGTTTTTG 58.527 50.000 0.00 0.00 34.49 2.44
838 839 1.096416 TTCGGGCGAAGTGTTTTTGT 58.904 45.000 0.00 0.00 0.00 2.83
839 840 0.378962 TCGGGCGAAGTGTTTTTGTG 59.621 50.000 0.00 0.00 0.00 3.33
840 841 1.206115 CGGGCGAAGTGTTTTTGTGC 61.206 55.000 0.00 0.00 0.00 4.57
841 842 0.179124 GGGCGAAGTGTTTTTGTGCA 60.179 50.000 0.00 0.00 0.00 4.57
842 843 1.634702 GGCGAAGTGTTTTTGTGCAA 58.365 45.000 0.00 0.00 0.00 4.08
843 844 1.323235 GGCGAAGTGTTTTTGTGCAAC 59.677 47.619 0.00 0.00 37.35 4.17
853 854 3.568743 TGTGCAACACGTGTCGGC 61.569 61.111 28.42 28.42 45.67 5.54
854 855 4.643385 GTGCAACACGTGTCGGCG 62.643 66.667 28.77 17.55 36.32 6.46
856 857 3.932313 GCAACACGTGTCGGCGTT 61.932 61.111 23.61 1.26 43.83 4.84
857 858 2.587679 GCAACACGTGTCGGCGTTA 61.588 57.895 23.61 0.00 43.83 3.18
858 859 1.485514 CAACACGTGTCGGCGTTAG 59.514 57.895 23.61 1.13 43.83 2.34
859 860 2.305127 AACACGTGTCGGCGTTAGC 61.305 57.895 23.61 0.00 43.83 3.09
860 861 2.430244 CACGTGTCGGCGTTAGCT 60.430 61.111 7.58 0.00 43.83 3.32
861 862 2.019951 CACGTGTCGGCGTTAGCTT 61.020 57.895 7.58 0.00 43.83 3.74
862 863 1.300388 ACGTGTCGGCGTTAGCTTT 60.300 52.632 6.85 0.00 43.04 3.51
863 864 0.877213 ACGTGTCGGCGTTAGCTTTT 60.877 50.000 6.85 0.00 43.04 2.27
864 865 0.233848 CGTGTCGGCGTTAGCTTTTT 59.766 50.000 6.85 0.00 44.37 1.94
865 866 1.720547 CGTGTCGGCGTTAGCTTTTTC 60.721 52.381 6.85 0.00 44.37 2.29
866 867 0.869730 TGTCGGCGTTAGCTTTTTCC 59.130 50.000 6.85 0.00 44.37 3.13
867 868 0.869730 GTCGGCGTTAGCTTTTTCCA 59.130 50.000 6.85 0.00 44.37 3.53
868 869 1.264826 GTCGGCGTTAGCTTTTTCCAA 59.735 47.619 6.85 0.00 44.37 3.53
875 876 6.330278 GGCGTTAGCTTTTTCCAAGATTAAT 58.670 36.000 0.00 0.00 44.37 1.40
876 877 6.253512 GGCGTTAGCTTTTTCCAAGATTAATG 59.746 38.462 0.00 0.00 44.37 1.90
882 883 5.062183 GCTTTTTCCAAGATTAATGTTCGGC 59.938 40.000 0.00 0.00 0.00 5.54
914 918 3.294750 CCACGAATGGGTCCGAGA 58.705 61.111 0.00 0.00 43.04 4.04
950 954 5.068987 CCAAATATGTGGTCATGGGGTTAAG 59.931 44.000 3.43 0.00 35.70 1.85
961 965 5.181433 GTCATGGGGTTAAGAACTCTGTTTC 59.819 44.000 0.00 0.00 30.72 2.78
1043 1047 1.128200 TCTCTCCTCTCCTCTCCTCG 58.872 60.000 0.00 0.00 0.00 4.63
1044 1048 0.108585 CTCTCCTCTCCTCTCCTCGG 59.891 65.000 0.00 0.00 0.00 4.63
1046 1050 2.520741 CCTCTCCTCTCCTCGGCC 60.521 72.222 0.00 0.00 0.00 6.13
1047 1051 2.904866 CTCTCCTCTCCTCGGCCG 60.905 72.222 22.12 22.12 0.00 6.13
1280 1391 0.846427 ATCAAGGTGAGCCCCCTTCA 60.846 55.000 0.00 0.00 40.35 3.02
1351 1493 1.629861 CAAACCCCTAAACCCTACCGA 59.370 52.381 0.00 0.00 0.00 4.69
1384 1526 2.506472 GGGGGATCCGCTCTGTTC 59.494 66.667 26.34 6.74 33.42 3.18
1392 1534 2.202492 CGCTCTGTTCCCGAGTCG 60.202 66.667 5.29 5.29 0.00 4.18
1393 1535 2.507324 GCTCTGTTCCCGAGTCGC 60.507 66.667 7.12 0.00 0.00 5.19
1395 1537 2.979197 CTCTGTTCCCGAGTCGCGT 61.979 63.158 7.12 0.00 38.67 6.01
1397 1539 1.663702 CTGTTCCCGAGTCGCGTTT 60.664 57.895 7.12 0.00 38.67 3.60
1398 1540 1.219522 CTGTTCCCGAGTCGCGTTTT 61.220 55.000 7.12 0.00 38.67 2.43
1399 1541 1.203313 GTTCCCGAGTCGCGTTTTG 59.797 57.895 7.12 0.00 38.67 2.44
1400 1542 1.227321 TTCCCGAGTCGCGTTTTGT 60.227 52.632 7.12 0.00 38.67 2.83
1401 1543 1.216941 TTCCCGAGTCGCGTTTTGTC 61.217 55.000 7.12 0.00 38.67 3.18
1411 1558 0.747852 GCGTTTTGTCTTTGGGGGAA 59.252 50.000 0.00 0.00 0.00 3.97
1417 1564 1.518367 TGTCTTTGGGGGAACTGACT 58.482 50.000 0.00 0.00 0.00 3.41
1521 1668 3.112263 TCATCGAGGGGAAGGTACAAAT 58.888 45.455 0.00 0.00 0.00 2.32
1525 1672 2.618045 CGAGGGGAAGGTACAAATGCTT 60.618 50.000 0.00 0.00 0.00 3.91
1536 1683 1.884579 ACAAATGCTTGCCTGACTCTG 59.115 47.619 0.00 0.00 35.84 3.35
1537 1684 2.156917 CAAATGCTTGCCTGACTCTGA 58.843 47.619 0.00 0.00 0.00 3.27
1538 1685 2.555325 CAAATGCTTGCCTGACTCTGAA 59.445 45.455 0.00 0.00 0.00 3.02
1539 1686 2.803030 ATGCTTGCCTGACTCTGAAT 57.197 45.000 0.00 0.00 0.00 2.57
1540 1687 2.574006 TGCTTGCCTGACTCTGAATT 57.426 45.000 0.00 0.00 0.00 2.17
1541 1688 2.867624 TGCTTGCCTGACTCTGAATTT 58.132 42.857 0.00 0.00 0.00 1.82
1542 1689 3.225104 TGCTTGCCTGACTCTGAATTTT 58.775 40.909 0.00 0.00 0.00 1.82
1557 1704 7.014615 ACTCTGAATTTTGGCTGATTTAAGTGT 59.985 33.333 0.00 0.00 0.00 3.55
1595 1742 0.108396 ATTTTGGCTGTTGGTTGGGC 59.892 50.000 0.00 0.00 0.00 5.36
1696 1843 7.004086 AGTAAGCTATGAGATAACTCTGCTCT 58.996 38.462 12.89 7.11 42.99 4.09
1704 1851 0.037326 TAACTCTGCTCTTGCGGTGG 60.037 55.000 0.00 0.00 45.38 4.61
1705 1852 2.044806 AACTCTGCTCTTGCGGTGGT 62.045 55.000 0.00 0.00 45.38 4.16
1706 1853 2.031012 TCTGCTCTTGCGGTGGTG 59.969 61.111 0.00 0.00 45.38 4.17
1725 1872 1.069935 GCCGGTCATTCTAGAGGCC 59.930 63.158 1.90 0.00 38.72 5.19
1750 1897 7.233553 CCTAGTGTTTGTCCTGGATGATAGATA 59.766 40.741 0.00 0.00 0.00 1.98
1779 1926 4.632153 TCCTGCTTTGTTAGTTCTGAGTC 58.368 43.478 0.00 0.00 0.00 3.36
1786 1933 7.985184 TGCTTTGTTAGTTCTGAGTCTTTAGAA 59.015 33.333 0.00 0.00 0.00 2.10
1788 1935 8.888579 TTTGTTAGTTCTGAGTCTTTAGAAGG 57.111 34.615 0.00 0.00 33.90 3.46
1789 1936 7.834881 TGTTAGTTCTGAGTCTTTAGAAGGA 57.165 36.000 0.00 0.00 33.90 3.36
1790 1937 8.423906 TGTTAGTTCTGAGTCTTTAGAAGGAT 57.576 34.615 0.00 0.00 33.90 3.24
1791 1938 8.307483 TGTTAGTTCTGAGTCTTTAGAAGGATG 58.693 37.037 0.00 0.00 33.90 3.51
1792 1939 6.926630 AGTTCTGAGTCTTTAGAAGGATGT 57.073 37.500 0.00 0.00 33.90 3.06
1794 1941 8.602472 AGTTCTGAGTCTTTAGAAGGATGTAT 57.398 34.615 0.00 0.00 33.90 2.29
1859 2006 6.973474 GGTCTAGTGCAATGTAACTAGTACTG 59.027 42.308 18.18 0.00 33.46 2.74
1865 2012 6.019801 GTGCAATGTAACTAGTACTGGATTCG 60.020 42.308 13.86 0.00 33.46 3.34
1876 2023 2.351276 GGATTCGGTGTGCTGGGT 59.649 61.111 0.00 0.00 0.00 4.51
1933 2164 2.871236 GCAAATTGCCCAGCAGCTTAAA 60.871 45.455 6.72 0.00 40.61 1.52
2023 2254 4.454678 TCTGTTCATGCTGTCAGAAAAGT 58.545 39.130 3.32 0.00 34.61 2.66
2027 2258 6.728200 TGTTCATGCTGTCAGAAAAGTAAAG 58.272 36.000 3.32 0.00 0.00 1.85
2030 2261 7.194607 TCATGCTGTCAGAAAAGTAAAGAAG 57.805 36.000 3.32 0.00 0.00 2.85
2033 2264 7.624360 TGCTGTCAGAAAAGTAAAGAAGAAA 57.376 32.000 3.32 0.00 0.00 2.52
2035 2266 7.552687 TGCTGTCAGAAAAGTAAAGAAGAAAGA 59.447 33.333 3.32 0.00 0.00 2.52
2037 2268 9.709600 CTGTCAGAAAAGTAAAGAAGAAAGAAC 57.290 33.333 0.00 0.00 0.00 3.01
2039 2270 9.923786 GTCAGAAAAGTAAAGAAGAAAGAACTC 57.076 33.333 0.00 0.00 0.00 3.01
2040 2271 9.892130 TCAGAAAAGTAAAGAAGAAAGAACTCT 57.108 29.630 0.00 0.00 0.00 3.24
2061 2292 6.370994 ACTCTAATCTGTCAGTTCTGCATTTG 59.629 38.462 0.00 0.00 0.00 2.32
2091 2344 8.079203 GTCCTTACAGATGTGACATGTATCTAG 58.921 40.741 1.23 4.51 30.43 2.43
2092 2345 7.780271 TCCTTACAGATGTGACATGTATCTAGT 59.220 37.037 1.23 11.13 30.43 2.57
2093 2346 9.067986 CCTTACAGATGTGACATGTATCTAGTA 57.932 37.037 1.23 10.40 30.43 1.82
2096 2349 7.890515 ACAGATGTGACATGTATCTAGTATGG 58.109 38.462 1.23 0.50 30.43 2.74
2097 2350 6.810676 CAGATGTGACATGTATCTAGTATGGC 59.189 42.308 1.23 0.00 30.43 4.40
2098 2351 6.723515 AGATGTGACATGTATCTAGTATGGCT 59.276 38.462 1.23 0.00 31.11 4.75
2099 2352 6.089249 TGTGACATGTATCTAGTATGGCTG 57.911 41.667 0.00 0.00 31.11 4.85
2100 2353 4.926238 GTGACATGTATCTAGTATGGCTGC 59.074 45.833 0.00 0.00 31.11 5.25
2101 2354 4.835056 TGACATGTATCTAGTATGGCTGCT 59.165 41.667 0.00 0.00 31.11 4.24
2102 2355 6.010219 TGACATGTATCTAGTATGGCTGCTA 58.990 40.000 0.00 0.00 31.11 3.49
2103 2356 6.493458 TGACATGTATCTAGTATGGCTGCTAA 59.507 38.462 0.00 0.00 31.11 3.09
2104 2357 7.179160 TGACATGTATCTAGTATGGCTGCTAAT 59.821 37.037 0.00 0.00 31.11 1.73
2105 2358 8.595362 ACATGTATCTAGTATGGCTGCTAATA 57.405 34.615 0.00 0.00 0.00 0.98
2106 2359 9.035890 ACATGTATCTAGTATGGCTGCTAATAA 57.964 33.333 0.00 0.00 0.00 1.40
2107 2360 9.875691 CATGTATCTAGTATGGCTGCTAATAAA 57.124 33.333 0.00 0.00 0.00 1.40
2138 2391 5.324409 TGCCAGATTTCAGTTTAAGTGGAT 58.676 37.500 0.00 0.00 0.00 3.41
2144 2397 3.695830 TCAGTTTAAGTGGATTCGCCT 57.304 42.857 0.00 0.00 37.63 5.52
2150 2403 5.186409 AGTTTAAGTGGATTCGCCTGTAGTA 59.814 40.000 0.00 0.00 37.63 1.82
2151 2404 5.864418 TTAAGTGGATTCGCCTGTAGTAT 57.136 39.130 0.00 0.00 37.63 2.12
2152 2405 6.964807 TTAAGTGGATTCGCCTGTAGTATA 57.035 37.500 0.00 0.00 37.63 1.47
2183 2438 9.716507 CCACCAATAATAAACTATCTGTTTTCG 57.283 33.333 0.00 0.00 45.69 3.46
2201 2459 7.970384 TGTTTTCGCTAATCTATTTGTTCGAT 58.030 30.769 0.00 0.00 0.00 3.59
2323 2586 5.500645 TGTGAAGATGTAGTCTGATACCG 57.499 43.478 0.00 0.00 37.23 4.02
2424 2694 9.988350 GAACATAAATGTAGTGATAACCAGTTG 57.012 33.333 0.00 0.00 40.80 3.16
2512 2873 6.713450 TGGGTATTTGAAGACTGTTTACTTCC 59.287 38.462 0.00 0.00 40.92 3.46
2514 2875 4.806342 TTTGAAGACTGTTTACTTCCGC 57.194 40.909 0.00 0.00 40.92 5.54
2522 2886 8.788325 AAGACTGTTTACTTCCGCTTTTATAT 57.212 30.769 0.00 0.00 0.00 0.86
2537 2901 8.292448 CCGCTTTTATATCCATATCCATTATGC 58.708 37.037 0.00 0.00 37.04 3.14
2555 2919 0.033109 GCCCCAATAGCAGGAAGGTT 60.033 55.000 0.00 0.00 0.00 3.50
2653 3017 1.131126 CATTCATGGACGTGTTGAGGC 59.869 52.381 0.00 0.00 0.00 4.70
2656 3020 1.079819 ATGGACGTGTTGAGGCGAG 60.080 57.895 0.00 0.00 0.00 5.03
2658 3022 1.733399 GGACGTGTTGAGGCGAGAC 60.733 63.158 0.00 0.00 0.00 3.36
2661 3025 1.173444 ACGTGTTGAGGCGAGACTCT 61.173 55.000 7.54 0.00 38.32 3.24
2674 3038 6.508777 AGGCGAGACTCTTATCTTTACATTC 58.491 40.000 0.03 0.00 0.00 2.67
2676 3040 6.461788 GGCGAGACTCTTATCTTTACATTCCT 60.462 42.308 0.03 0.00 0.00 3.36
2698 3062 9.940166 TTCCTTCTTTGTTAAAATTAGTTCGTC 57.060 29.630 0.00 0.00 0.00 4.20
2733 3131 7.395190 TGGGATTATTGATCTCTGTGTTTTG 57.605 36.000 0.00 0.00 36.14 2.44
2778 3176 5.184864 ACAGACATGTAGTTCCTTCAGAGAG 59.815 44.000 0.00 0.00 38.09 3.20
2789 3187 5.640158 TCCTTCAGAGAGTTGGGTTTTTA 57.360 39.130 0.00 0.00 0.00 1.52
2790 3188 5.374071 TCCTTCAGAGAGTTGGGTTTTTAC 58.626 41.667 0.00 0.00 0.00 2.01
2791 3189 5.104277 TCCTTCAGAGAGTTGGGTTTTTACA 60.104 40.000 0.00 0.00 0.00 2.41
2792 3190 5.239525 CCTTCAGAGAGTTGGGTTTTTACAG 59.760 44.000 0.00 0.00 0.00 2.74
2793 3191 5.367945 TCAGAGAGTTGGGTTTTTACAGT 57.632 39.130 0.00 0.00 0.00 3.55
2795 3193 6.891388 TCAGAGAGTTGGGTTTTTACAGTTA 58.109 36.000 0.00 0.00 0.00 2.24
2842 3240 9.796120 CAAGACATTAAGTTTGTGTTTCCTAAA 57.204 29.630 0.00 0.00 29.06 1.85
2858 3256 6.857777 TTCCTAAAATTGGTTTTGCATGTG 57.142 33.333 0.00 0.00 38.01 3.21
2866 3265 2.880268 TGGTTTTGCATGTGACTCTCTG 59.120 45.455 0.00 0.00 0.00 3.35
2884 3283 5.762045 TCTCTGTTCAGCTATTTTTGTTGC 58.238 37.500 0.00 0.00 0.00 4.17
2885 3284 5.299028 TCTCTGTTCAGCTATTTTTGTTGCA 59.701 36.000 0.00 0.00 0.00 4.08
2887 3286 6.336566 TCTGTTCAGCTATTTTTGTTGCAAA 58.663 32.000 0.00 0.00 0.00 3.68
2936 3336 6.883744 TCTTATTTTCCCTGTTTGCACTTTT 58.116 32.000 0.00 0.00 0.00 2.27
2946 3346 8.041323 TCCCTGTTTGCACTTTTTGTTAATTAA 58.959 29.630 0.00 0.00 0.00 1.40
2959 3359 8.948631 TTTTGTTAATTAATGTTGAGTTGGCA 57.051 26.923 0.31 0.00 0.00 4.92
3065 3465 9.294030 CTTTTTGATAGCCTATGTTGATTGTTC 57.706 33.333 0.00 0.00 0.00 3.18
3067 3467 5.670485 TGATAGCCTATGTTGATTGTTCGT 58.330 37.500 0.00 0.00 0.00 3.85
3104 3504 5.581126 TGCTATGCCTTTGTAAATTCCTG 57.419 39.130 0.00 0.00 0.00 3.86
3105 3505 4.142182 TGCTATGCCTTTGTAAATTCCTGC 60.142 41.667 0.00 0.00 0.00 4.85
3106 3506 3.893326 ATGCCTTTGTAAATTCCTGCC 57.107 42.857 0.00 0.00 0.00 4.85
3107 3507 2.888212 TGCCTTTGTAAATTCCTGCCT 58.112 42.857 0.00 0.00 0.00 4.75
3392 3811 4.320788 GCAACAACTCTGCTGCTCTAATTT 60.321 41.667 0.00 0.00 40.75 1.82
3672 4093 4.053983 AGTATGCATTGCTGTCACTATCG 58.946 43.478 3.54 0.00 0.00 2.92
4057 4478 3.779444 TCTCAGTCCACTTCCTATGTGT 58.221 45.455 0.00 0.00 33.92 3.72
4158 4587 7.073457 TGATCTGATGCTCTAGTACTCTAGT 57.927 40.000 0.00 0.00 42.88 2.57
4176 4605 6.042781 ACTCTAGTGTGTTTCCTTATGGTGAA 59.957 38.462 0.00 0.00 34.23 3.18
4227 4656 6.589523 CGACCAATTTAAAATTTCCTCATGCA 59.410 34.615 0.00 0.00 0.00 3.96
4360 4791 1.278238 CTCGGCGTGTTTGATACTCC 58.722 55.000 6.85 0.00 0.00 3.85
4375 4806 6.961360 TGATACTCCGATGTTCATCTTACT 57.039 37.500 10.44 0.00 0.00 2.24
4380 4811 6.900189 ACTCCGATGTTCATCTTACTATACG 58.100 40.000 10.44 0.00 0.00 3.06
4401 4832 6.822073 ACGACTTTTTAGCAACATTTTTCC 57.178 33.333 0.00 0.00 0.00 3.13
4402 4833 6.569780 ACGACTTTTTAGCAACATTTTTCCT 58.430 32.000 0.00 0.00 0.00 3.36
4403 4834 6.475402 ACGACTTTTTAGCAACATTTTTCCTG 59.525 34.615 0.00 0.00 0.00 3.86
4404 4835 6.475402 CGACTTTTTAGCAACATTTTTCCTGT 59.525 34.615 0.00 0.00 0.00 4.00
4405 4836 7.010091 CGACTTTTTAGCAACATTTTTCCTGTT 59.990 33.333 0.00 0.00 37.31 3.16
4406 4837 9.308318 GACTTTTTAGCAACATTTTTCCTGTTA 57.692 29.630 0.00 0.00 35.15 2.41
4473 4907 0.323725 ACAACCCATCAGCCATCACC 60.324 55.000 0.00 0.00 0.00 4.02
4730 5167 5.594926 ACTTTTGCATTTCTCCTTGACAAG 58.405 37.500 8.31 8.31 0.00 3.16
4764 5201 3.334583 TGTTACCTCTGATGTGAAGCC 57.665 47.619 0.00 0.00 0.00 4.35
4773 5210 3.028850 CTGATGTGAAGCCCCAATTCAT 58.971 45.455 0.00 0.00 38.81 2.57
4950 5387 0.331278 CCCATTGGCACCAGGTTCTA 59.669 55.000 0.00 0.00 0.00 2.10
5016 5460 6.071952 TGGTTATTCTTGCTCCTTTTGCTAAG 60.072 38.462 0.00 0.00 0.00 2.18
5026 5470 5.438761 TCCTTTTGCTAAGTTTGCTCTTC 57.561 39.130 10.60 0.00 0.00 2.87
5153 5597 4.631377 CGCTGTCTGAATATTCACTTGGAA 59.369 41.667 14.23 1.97 40.46 3.53
5223 5668 6.101997 CAGATGCTACATCTTTATATCGGCA 58.898 40.000 7.35 0.00 0.00 5.69
5263 5708 3.632145 CCCAGTCTAACTGTGCTTTGTTT 59.368 43.478 6.37 0.00 44.50 2.83
5270 5715 3.896648 ACTGTGCTTTGTTTACCATCG 57.103 42.857 0.00 0.00 0.00 3.84
5310 5755 2.507102 CCAGCTACACGCGGTCAG 60.507 66.667 12.47 4.77 45.59 3.51
5319 5764 1.335689 ACACGCGGTCAGTAAACTCTC 60.336 52.381 12.47 0.00 0.00 3.20
5436 5881 8.720562 TGAAATAATGTGTATGATGCCTAATCG 58.279 33.333 0.00 0.00 38.22 3.34
5966 6414 0.827925 TTGTCGTCTGCCAGTCCTCT 60.828 55.000 0.00 0.00 0.00 3.69
6068 6516 7.424452 GCTTACAAATGTTTTTCTCGGTATACG 59.576 37.037 0.00 0.00 46.11 3.06
6086 6534 3.051606 ACGCCATGAAAATCGAATTCG 57.948 42.857 21.78 21.78 41.45 3.34
6187 6731 9.991388 TTTTATTTTATAATGTGTGTACTCCGC 57.009 29.630 0.00 0.00 0.00 5.54
6191 6735 0.601558 AATGTGTGTACTCCGCGACT 59.398 50.000 8.23 0.00 0.00 4.18
6206 6750 1.661112 GCGACTGAGCTGTACATTTCC 59.339 52.381 0.00 0.00 0.00 3.13
6264 6808 7.765307 TGCTCCATCACTAAATCTGAAAAATC 58.235 34.615 0.00 0.00 0.00 2.17
6265 6809 6.909357 GCTCCATCACTAAATCTGAAAAATCG 59.091 38.462 0.00 0.00 0.00 3.34
6268 6812 8.879759 TCCATCACTAAATCTGAAAAATCGTAC 58.120 33.333 0.00 0.00 0.00 3.67
6272 6816 7.062605 TCACTAAATCTGAAAAATCGTACGGTC 59.937 37.037 16.52 6.20 0.00 4.79
6315 6859 4.840168 GCGTGGGCCTACGATAAA 57.160 55.556 41.35 0.00 46.46 1.40
6316 6860 3.068574 GCGTGGGCCTACGATAAAA 57.931 52.632 41.35 0.00 46.46 1.52
6317 6861 1.371595 GCGTGGGCCTACGATAAAAA 58.628 50.000 41.35 0.00 46.46 1.94
6318 6862 1.944709 GCGTGGGCCTACGATAAAAAT 59.055 47.619 41.35 0.00 46.46 1.82
6319 6863 2.356695 GCGTGGGCCTACGATAAAAATT 59.643 45.455 41.35 0.00 46.46 1.82
6320 6864 3.790789 GCGTGGGCCTACGATAAAAATTG 60.791 47.826 41.35 12.15 46.46 2.32
6321 6865 3.375922 CGTGGGCCTACGATAAAAATTGT 59.624 43.478 35.51 0.00 46.46 2.71
6322 6866 4.668289 GTGGGCCTACGATAAAAATTGTG 58.332 43.478 2.40 0.00 0.00 3.33
6323 6867 3.697045 TGGGCCTACGATAAAAATTGTGG 59.303 43.478 4.53 0.00 0.00 4.17
6324 6868 3.949113 GGGCCTACGATAAAAATTGTGGA 59.051 43.478 0.84 0.00 0.00 4.02
6325 6869 4.036380 GGGCCTACGATAAAAATTGTGGAG 59.964 45.833 0.84 0.00 0.00 3.86
6326 6870 4.036380 GGCCTACGATAAAAATTGTGGAGG 59.964 45.833 0.00 0.00 0.00 4.30
6327 6871 4.497507 GCCTACGATAAAAATTGTGGAGGC 60.498 45.833 0.00 0.00 39.03 4.70
6328 6872 4.036380 CCTACGATAAAAATTGTGGAGGCC 59.964 45.833 0.00 0.00 0.00 5.19
6329 6873 3.426615 ACGATAAAAATTGTGGAGGCCA 58.573 40.909 5.01 0.00 0.00 5.36
6343 6887 0.957395 AGGCCACATGAAAGTCTGCG 60.957 55.000 5.01 0.00 0.00 5.18
6347 6891 1.002134 ACATGAAAGTCTGCGGGGG 60.002 57.895 0.00 0.00 0.00 5.40
6380 6924 0.259938 ATCAGGGTTGGCAAGGATCC 59.740 55.000 2.48 2.48 0.00 3.36
6449 6993 2.739913 GAGTAGTGTATTTGCGCCAACA 59.260 45.455 4.18 0.39 0.00 3.33
6574 8013 6.038603 TGCATCAGCCTCTTGTGATAAATAAC 59.961 38.462 0.00 0.00 41.13 1.89
6576 8015 7.637229 CATCAGCCTCTTGTGATAAATAACAG 58.363 38.462 0.00 0.00 31.99 3.16
6594 8033 8.842358 AATAACAGTCTCTCCGTTTCAAAATA 57.158 30.769 0.00 0.00 0.00 1.40
6599 8038 7.228706 ACAGTCTCTCCGTTTCAAAATAATTGT 59.771 33.333 0.00 0.00 0.00 2.71
6736 8175 7.768120 AGAATCTCAGGAGAATAATTGTGTGTC 59.232 37.037 2.68 0.00 41.36 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.680338 AGCTTGTCACTTCCCAACAC 58.320 50.000 0.00 0.00 0.00 3.32
3 4 2.223377 CGTTAGCTTGTCACTTCCCAAC 59.777 50.000 0.00 0.00 0.00 3.77
5 6 1.689813 TCGTTAGCTTGTCACTTCCCA 59.310 47.619 0.00 0.00 0.00 4.37
6 7 2.338500 CTCGTTAGCTTGTCACTTCCC 58.662 52.381 0.00 0.00 0.00 3.97
7 8 1.727335 GCTCGTTAGCTTGTCACTTCC 59.273 52.381 0.00 0.00 45.85 3.46
19 20 0.654683 GCCTGCAATCTGCTCGTTAG 59.345 55.000 0.00 0.00 45.31 2.34
21 22 1.302752 TGCCTGCAATCTGCTCGTT 60.303 52.632 0.00 0.00 45.31 3.85
22 23 1.744368 CTGCCTGCAATCTGCTCGT 60.744 57.895 0.00 0.00 45.31 4.18
23 24 2.470362 CCTGCCTGCAATCTGCTCG 61.470 63.158 0.00 0.00 45.31 5.03
24 25 0.107508 TACCTGCCTGCAATCTGCTC 60.108 55.000 0.00 0.00 45.31 4.26
28 29 2.038295 GCTATCTACCTGCCTGCAATCT 59.962 50.000 0.00 0.00 0.00 2.40
29 30 2.421619 GCTATCTACCTGCCTGCAATC 58.578 52.381 0.00 0.00 0.00 2.67
32 33 0.690744 TGGCTATCTACCTGCCTGCA 60.691 55.000 0.00 0.00 46.23 4.41
33 34 0.034616 CTGGCTATCTACCTGCCTGC 59.965 60.000 0.00 0.00 46.23 4.85
34 35 0.683973 CCTGGCTATCTACCTGCCTG 59.316 60.000 0.00 0.00 46.23 4.85
35 36 0.472734 CCCTGGCTATCTACCTGCCT 60.473 60.000 0.00 0.00 46.23 4.75
36 37 2.062070 CCCTGGCTATCTACCTGCC 58.938 63.158 0.00 0.00 46.26 4.85
37 38 1.373059 GCCCTGGCTATCTACCTGC 59.627 63.158 0.00 0.00 38.26 4.85
38 39 1.821061 CGGCCCTGGCTATCTACCTG 61.821 65.000 8.29 0.00 41.60 4.00
39 40 1.534235 CGGCCCTGGCTATCTACCT 60.534 63.158 8.29 0.00 41.60 3.08
40 41 2.584391 CCGGCCCTGGCTATCTACC 61.584 68.421 8.29 0.00 41.60 3.18
41 42 3.060866 CCGGCCCTGGCTATCTAC 58.939 66.667 8.29 0.00 41.60 2.59
58 59 4.465512 CAGCGTTGTCGGCATGGC 62.466 66.667 9.69 9.69 37.56 4.40
59 60 4.465512 GCAGCGTTGTCGGCATGG 62.466 66.667 0.00 0.00 37.56 3.66
60 61 3.656243 CTGCAGCGTTGTCGGCATG 62.656 63.158 0.00 0.00 34.82 4.06
61 62 3.425713 CTGCAGCGTTGTCGGCAT 61.426 61.111 0.00 0.00 34.82 4.40
73 74 4.624364 TGGGTGTCACCGCTGCAG 62.624 66.667 15.93 10.11 39.83 4.41
74 75 4.927782 GTGGGTGTCACCGCTGCA 62.928 66.667 15.93 5.29 39.83 4.41
76 77 4.293648 TCGTGGGTGTCACCGCTG 62.294 66.667 15.93 7.69 43.23 5.18
77 78 3.991051 CTCGTGGGTGTCACCGCT 61.991 66.667 15.93 0.00 43.23 5.52
78 79 3.509137 TTCTCGTGGGTGTCACCGC 62.509 63.158 15.93 10.11 43.23 5.68
79 80 1.372997 CTTCTCGTGGGTGTCACCG 60.373 63.158 15.93 4.90 43.23 4.94
80 81 0.038159 CTCTTCTCGTGGGTGTCACC 60.038 60.000 14.13 14.13 43.23 4.02
81 82 0.038159 CCTCTTCTCGTGGGTGTCAC 60.038 60.000 0.00 0.00 42.74 3.67
82 83 1.185618 CCCTCTTCTCGTGGGTGTCA 61.186 60.000 0.00 0.00 40.79 3.58
83 84 1.592223 CCCTCTTCTCGTGGGTGTC 59.408 63.158 0.00 0.00 40.79 3.67
84 85 3.793060 CCCTCTTCTCGTGGGTGT 58.207 61.111 0.00 0.00 40.79 4.16
89 90 2.125912 CGCCACCCTCTTCTCGTG 60.126 66.667 0.00 0.00 0.00 4.35
90 91 4.070552 GCGCCACCCTCTTCTCGT 62.071 66.667 0.00 0.00 0.00 4.18
91 92 4.821589 GGCGCCACCCTCTTCTCG 62.822 72.222 24.80 0.00 0.00 4.04
92 93 4.821589 CGGCGCCACCCTCTTCTC 62.822 72.222 28.98 0.00 33.26 2.87
201 202 4.832608 GTAGGAAGGCGGCGGTGG 62.833 72.222 9.78 0.00 0.00 4.61
207 208 3.471244 CTCGAGCGTAGGAAGGCGG 62.471 68.421 0.00 0.00 41.40 6.13
208 209 2.024871 CTCGAGCGTAGGAAGGCG 59.975 66.667 0.00 0.00 41.40 5.52
209 210 2.413765 CCTCGAGCGTAGGAAGGC 59.586 66.667 6.99 0.00 36.08 4.35
210 211 2.413765 GCCTCGAGCGTAGGAAGG 59.586 66.667 6.99 0.00 36.08 3.46
211 212 2.413765 GGCCTCGAGCGTAGGAAG 59.586 66.667 6.99 0.00 45.17 3.46
212 213 3.515286 CGGCCTCGAGCGTAGGAA 61.515 66.667 6.99 0.00 45.17 3.36
230 231 3.685214 CTCGCTTGTCGACCTCCGG 62.685 68.421 14.12 0.00 43.16 5.14
231 232 2.202492 CTCGCTTGTCGACCTCCG 60.202 66.667 14.12 12.34 43.16 4.63
232 233 2.507324 GCTCGCTTGTCGACCTCC 60.507 66.667 14.12 0.00 43.16 4.30
233 234 2.876645 CGCTCGCTTGTCGACCTC 60.877 66.667 14.12 0.78 43.16 3.85
234 235 3.612371 GACGCTCGCTTGTCGACCT 62.612 63.158 14.12 0.00 43.16 3.85
235 236 3.173240 GACGCTCGCTTGTCGACC 61.173 66.667 14.12 0.00 43.16 4.79
236 237 3.173240 GGACGCTCGCTTGTCGAC 61.173 66.667 9.11 9.11 43.16 4.20
237 238 4.415332 GGGACGCTCGCTTGTCGA 62.415 66.667 0.00 0.00 46.29 4.20
238 239 4.421479 AGGGACGCTCGCTTGTCG 62.421 66.667 0.00 0.00 36.11 4.35
239 240 2.811317 CAGGGACGCTCGCTTGTC 60.811 66.667 2.63 0.00 37.59 3.18
241 242 3.356639 TAGCAGGGACGCTCGCTTG 62.357 63.158 17.13 0.00 42.62 4.01
242 243 3.068691 TAGCAGGGACGCTCGCTT 61.069 61.111 17.13 6.51 42.62 4.68
243 244 3.522731 CTAGCAGGGACGCTCGCT 61.523 66.667 16.47 16.47 42.62 4.93
244 245 4.577246 CCTAGCAGGGACGCTCGC 62.577 72.222 0.00 6.02 42.62 5.03
245 246 3.141488 ACCTAGCAGGGACGCTCG 61.141 66.667 7.06 0.00 42.62 5.03
246 247 2.496817 CACCTAGCAGGGACGCTC 59.503 66.667 7.06 0.00 42.62 5.03
247 248 3.077556 CCACCTAGCAGGGACGCT 61.078 66.667 7.06 0.00 46.26 5.07
248 249 4.840005 GCCACCTAGCAGGGACGC 62.840 72.222 7.06 2.38 40.58 5.19
249 250 4.514577 CGCCACCTAGCAGGGACG 62.515 72.222 7.06 4.09 40.58 4.79
250 251 4.840005 GCGCCACCTAGCAGGGAC 62.840 72.222 0.00 0.00 40.58 4.46
253 254 4.880537 CTCGCGCCACCTAGCAGG 62.881 72.222 0.00 1.16 42.49 4.85
281 282 3.408851 GTCGCCGTCCAAACCGAC 61.409 66.667 0.00 0.00 42.39 4.79
285 286 4.072088 CTGCGTCGCCGTCCAAAC 62.072 66.667 15.88 0.00 36.15 2.93
286 287 4.287781 TCTGCGTCGCCGTCCAAA 62.288 61.111 15.88 0.00 36.15 3.28
287 288 4.717629 CTCTGCGTCGCCGTCCAA 62.718 66.667 15.88 0.00 36.15 3.53
290 291 4.838486 CTCCTCTGCGTCGCCGTC 62.838 72.222 15.88 0.00 36.15 4.79
292 293 4.838486 GTCTCCTCTGCGTCGCCG 62.838 72.222 15.88 8.79 37.07 6.46
293 294 4.500116 GGTCTCCTCTGCGTCGCC 62.500 72.222 15.88 0.00 0.00 5.54
294 295 4.838486 CGGTCTCCTCTGCGTCGC 62.838 72.222 11.10 11.10 0.00 5.19
295 296 3.384014 GACGGTCTCCTCTGCGTCG 62.384 68.421 0.00 0.00 0.00 5.12
296 297 1.863662 TTGACGGTCTCCTCTGCGTC 61.864 60.000 9.88 0.00 0.00 5.19
297 298 1.867919 CTTGACGGTCTCCTCTGCGT 61.868 60.000 9.88 0.00 0.00 5.24
298 299 1.153939 CTTGACGGTCTCCTCTGCG 60.154 63.158 9.88 0.00 0.00 5.18
299 300 1.446966 GCTTGACGGTCTCCTCTGC 60.447 63.158 9.88 1.55 0.00 4.26
300 301 1.216710 GGCTTGACGGTCTCCTCTG 59.783 63.158 9.88 0.00 0.00 3.35
301 302 0.968393 GAGGCTTGACGGTCTCCTCT 60.968 60.000 24.16 12.77 40.02 3.69
302 303 1.513622 GAGGCTTGACGGTCTCCTC 59.486 63.158 20.31 20.31 36.86 3.71
303 304 3.701454 GAGGCTTGACGGTCTCCT 58.299 61.111 9.88 12.33 32.35 3.69
305 306 1.079750 GTGGAGGCTTGACGGTCTC 60.080 63.158 9.88 0.00 37.24 3.36
306 307 2.932234 CGTGGAGGCTTGACGGTCT 61.932 63.158 9.88 0.00 0.00 3.85
307 308 2.432628 CGTGGAGGCTTGACGGTC 60.433 66.667 10.45 0.00 0.00 4.79
308 309 4.681978 GCGTGGAGGCTTGACGGT 62.682 66.667 17.53 0.00 33.68 4.83
330 331 1.437160 CTTCTCTCTCGCAGGGAGC 59.563 63.158 9.69 0.00 42.82 4.70
331 332 1.037030 AGCTTCTCTCTCGCAGGGAG 61.037 60.000 8.23 8.23 44.58 4.30
332 333 1.000270 AGCTTCTCTCTCGCAGGGA 60.000 57.895 0.00 0.00 0.00 4.20
333 334 1.437160 GAGCTTCTCTCTCGCAGGG 59.563 63.158 0.00 0.00 38.78 4.45
334 335 1.437160 GGAGCTTCTCTCTCGCAGG 59.563 63.158 0.00 0.00 41.60 4.85
335 336 1.437160 GGGAGCTTCTCTCTCGCAG 59.563 63.158 0.00 0.00 41.44 5.18
336 337 3.609703 GGGAGCTTCTCTCTCGCA 58.390 61.111 0.00 0.00 41.44 5.10
357 358 1.284982 CTTTGAGGGTGCGACTGTCG 61.285 60.000 24.78 24.78 43.89 4.35
358 359 1.569479 GCTTTGAGGGTGCGACTGTC 61.569 60.000 0.00 0.00 0.00 3.51
359 360 1.598130 GCTTTGAGGGTGCGACTGT 60.598 57.895 0.00 0.00 0.00 3.55
360 361 2.328099 GGCTTTGAGGGTGCGACTG 61.328 63.158 0.00 0.00 0.00 3.51
361 362 2.032681 GGCTTTGAGGGTGCGACT 59.967 61.111 0.00 0.00 0.00 4.18
362 363 3.056328 GGGCTTTGAGGGTGCGAC 61.056 66.667 0.00 0.00 0.00 5.19
363 364 4.344865 GGGGCTTTGAGGGTGCGA 62.345 66.667 0.00 0.00 0.00 5.10
378 379 1.991339 GAAATCGGGTGGGTAGGGGG 61.991 65.000 0.00 0.00 0.00 5.40
379 380 1.530283 GAAATCGGGTGGGTAGGGG 59.470 63.158 0.00 0.00 0.00 4.79
380 381 1.530283 GGAAATCGGGTGGGTAGGG 59.470 63.158 0.00 0.00 0.00 3.53
381 382 1.145377 CGGAAATCGGGTGGGTAGG 59.855 63.158 0.00 0.00 34.75 3.18
382 383 1.523032 GCGGAAATCGGGTGGGTAG 60.523 63.158 0.00 0.00 39.69 3.18
383 384 1.963464 GAGCGGAAATCGGGTGGGTA 61.963 60.000 0.00 0.00 39.69 3.69
384 385 3.325201 GAGCGGAAATCGGGTGGGT 62.325 63.158 0.00 0.00 39.69 4.51
385 386 2.513897 GAGCGGAAATCGGGTGGG 60.514 66.667 0.00 0.00 39.69 4.61
386 387 2.890474 CGAGCGGAAATCGGGTGG 60.890 66.667 0.00 0.00 39.69 4.61
387 388 3.564027 GCGAGCGGAAATCGGGTG 61.564 66.667 0.00 0.00 40.50 4.61
388 389 4.832608 GGCGAGCGGAAATCGGGT 62.833 66.667 0.00 0.00 40.50 5.28
392 393 4.176752 AGGGGGCGAGCGGAAATC 62.177 66.667 0.00 0.00 0.00 2.17
393 394 4.489771 CAGGGGGCGAGCGGAAAT 62.490 66.667 0.00 0.00 0.00 2.17
454 455 4.096003 AGAACCATGCCCGTCCCG 62.096 66.667 0.00 0.00 0.00 5.14
455 456 2.124695 GAGAACCATGCCCGTCCC 60.125 66.667 0.00 0.00 0.00 4.46
456 457 2.124695 GGAGAACCATGCCCGTCC 60.125 66.667 0.00 0.00 35.97 4.79
457 458 1.450312 CAGGAGAACCATGCCCGTC 60.450 63.158 0.00 0.00 38.94 4.79
458 459 2.671070 CAGGAGAACCATGCCCGT 59.329 61.111 0.00 0.00 38.94 5.28
459 460 2.825836 GCAGGAGAACCATGCCCG 60.826 66.667 0.00 0.00 38.94 6.13
460 461 1.452833 GAGCAGGAGAACCATGCCC 60.453 63.158 0.00 0.00 39.41 5.36
461 462 1.817099 CGAGCAGGAGAACCATGCC 60.817 63.158 0.00 0.00 39.41 4.40
462 463 2.467826 GCGAGCAGGAGAACCATGC 61.468 63.158 0.00 0.00 39.12 4.06
463 464 2.169789 CGCGAGCAGGAGAACCATG 61.170 63.158 0.00 0.00 38.94 3.66
464 465 2.185350 CGCGAGCAGGAGAACCAT 59.815 61.111 0.00 0.00 38.94 3.55
476 477 4.685026 CCCTATCGGACGCGCGAG 62.685 72.222 39.36 25.67 0.00 5.03
522 523 3.721706 CTCCCACCTGGCCCTGTC 61.722 72.222 0.00 0.00 0.00 3.51
553 554 4.742201 CACCCTGCTCACCGACCG 62.742 72.222 0.00 0.00 0.00 4.79
554 555 1.614241 ATACACCCTGCTCACCGACC 61.614 60.000 0.00 0.00 0.00 4.79
555 556 0.460284 CATACACCCTGCTCACCGAC 60.460 60.000 0.00 0.00 0.00 4.79
556 557 1.613317 CCATACACCCTGCTCACCGA 61.613 60.000 0.00 0.00 0.00 4.69
557 558 1.153369 CCATACACCCTGCTCACCG 60.153 63.158 0.00 0.00 0.00 4.94
558 559 1.452108 GCCATACACCCTGCTCACC 60.452 63.158 0.00 0.00 0.00 4.02
559 560 1.452108 GGCCATACACCCTGCTCAC 60.452 63.158 0.00 0.00 0.00 3.51
560 561 2.998097 GGCCATACACCCTGCTCA 59.002 61.111 0.00 0.00 0.00 4.26
561 562 2.203070 CGGCCATACACCCTGCTC 60.203 66.667 2.24 0.00 0.00 4.26
562 563 4.489771 GCGGCCATACACCCTGCT 62.490 66.667 2.24 0.00 0.00 4.24
564 565 4.155733 TCGCGGCCATACACCCTG 62.156 66.667 6.13 0.00 0.00 4.45
565 566 4.157120 GTCGCGGCCATACACCCT 62.157 66.667 6.13 0.00 0.00 4.34
581 582 3.566210 CCACCTTGGACCACCGGT 61.566 66.667 0.00 0.00 40.96 5.28
582 583 3.246112 TCCACCTTGGACCACCGG 61.246 66.667 0.00 0.00 42.67 5.28
583 584 2.347490 CTCCACCTTGGACCACCG 59.653 66.667 0.00 0.00 42.67 4.94
584 585 2.034221 GCTCCACCTTGGACCACC 59.966 66.667 0.00 0.00 42.67 4.61
585 586 1.302832 CAGCTCCACCTTGGACCAC 60.303 63.158 0.00 0.00 42.67 4.16
586 587 3.160585 CAGCTCCACCTTGGACCA 58.839 61.111 0.00 0.00 42.67 4.02
587 588 2.360475 GCAGCTCCACCTTGGACC 60.360 66.667 0.00 0.00 42.67 4.46
588 589 1.968540 GTGCAGCTCCACCTTGGAC 60.969 63.158 0.00 0.00 42.67 4.02
589 590 2.431683 GTGCAGCTCCACCTTGGA 59.568 61.111 0.00 0.00 45.98 3.53
590 591 3.052082 CGTGCAGCTCCACCTTGG 61.052 66.667 1.20 0.00 39.43 3.61
591 592 3.052082 CCGTGCAGCTCCACCTTG 61.052 66.667 1.20 0.00 32.10 3.61
592 593 4.335647 CCCGTGCAGCTCCACCTT 62.336 66.667 1.20 0.00 32.10 3.50
601 602 4.742201 CTCACCGTCCCCGTGCAG 62.742 72.222 0.00 0.00 0.00 4.41
603 604 3.718210 GATCTCACCGTCCCCGTGC 62.718 68.421 0.00 0.00 0.00 5.34
604 605 2.494918 GATCTCACCGTCCCCGTG 59.505 66.667 0.00 0.00 0.00 4.94
605 606 2.758737 GGATCTCACCGTCCCCGT 60.759 66.667 0.00 0.00 0.00 5.28
606 607 3.900892 CGGATCTCACCGTCCCCG 61.901 72.222 0.00 0.00 46.70 5.73
613 614 3.917760 CCTCCCGCGGATCTCACC 61.918 72.222 30.73 0.00 0.00 4.02
614 615 2.356818 CTTCCTCCCGCGGATCTCAC 62.357 65.000 30.73 0.00 32.02 3.51
615 616 2.043349 TTCCTCCCGCGGATCTCA 60.043 61.111 30.73 4.13 32.02 3.27
616 617 1.801309 CTCTTCCTCCCGCGGATCTC 61.801 65.000 30.73 0.00 32.02 2.75
617 618 1.830408 CTCTTCCTCCCGCGGATCT 60.830 63.158 30.73 0.00 32.02 2.75
618 619 1.801309 CTCTCTTCCTCCCGCGGATC 61.801 65.000 30.73 0.00 32.02 3.36
619 620 1.830408 CTCTCTTCCTCCCGCGGAT 60.830 63.158 30.73 0.00 32.02 4.18
620 621 2.440430 CTCTCTTCCTCCCGCGGA 60.440 66.667 30.73 12.25 0.00 5.54
621 622 2.440430 TCTCTCTTCCTCCCGCGG 60.440 66.667 21.04 21.04 0.00 6.46
622 623 1.032657 TTCTCTCTCTTCCTCCCGCG 61.033 60.000 0.00 0.00 0.00 6.46
623 624 0.744281 CTTCTCTCTCTTCCTCCCGC 59.256 60.000 0.00 0.00 0.00 6.13
624 625 2.428544 TCTTCTCTCTCTTCCTCCCG 57.571 55.000 0.00 0.00 0.00 5.14
625 626 3.909732 TCATCTTCTCTCTCTTCCTCCC 58.090 50.000 0.00 0.00 0.00 4.30
626 627 4.281688 CCATCATCTTCTCTCTCTTCCTCC 59.718 50.000 0.00 0.00 0.00 4.30
627 628 5.139727 TCCATCATCTTCTCTCTCTTCCTC 58.860 45.833 0.00 0.00 0.00 3.71
628 629 5.141455 TCCATCATCTTCTCTCTCTTCCT 57.859 43.478 0.00 0.00 0.00 3.36
629 630 4.895297 ACTCCATCATCTTCTCTCTCTTCC 59.105 45.833 0.00 0.00 0.00 3.46
630 631 5.221303 CCACTCCATCATCTTCTCTCTCTTC 60.221 48.000 0.00 0.00 0.00 2.87
631 632 4.650588 CCACTCCATCATCTTCTCTCTCTT 59.349 45.833 0.00 0.00 0.00 2.85
632 633 4.079269 TCCACTCCATCATCTTCTCTCTCT 60.079 45.833 0.00 0.00 0.00 3.10
633 634 4.214310 TCCACTCCATCATCTTCTCTCTC 58.786 47.826 0.00 0.00 0.00 3.20
634 635 4.079269 TCTCCACTCCATCATCTTCTCTCT 60.079 45.833 0.00 0.00 0.00 3.10
635 636 4.214310 TCTCCACTCCATCATCTTCTCTC 58.786 47.826 0.00 0.00 0.00 3.20
636 637 4.262891 TCTCCACTCCATCATCTTCTCT 57.737 45.455 0.00 0.00 0.00 3.10
637 638 4.834496 AGATCTCCACTCCATCATCTTCTC 59.166 45.833 0.00 0.00 0.00 2.87
638 639 4.589798 CAGATCTCCACTCCATCATCTTCT 59.410 45.833 0.00 0.00 0.00 2.85
639 640 4.800249 GCAGATCTCCACTCCATCATCTTC 60.800 50.000 0.00 0.00 0.00 2.87
640 641 3.071312 GCAGATCTCCACTCCATCATCTT 59.929 47.826 0.00 0.00 0.00 2.40
641 642 2.633967 GCAGATCTCCACTCCATCATCT 59.366 50.000 0.00 0.00 0.00 2.90
642 643 2.367894 TGCAGATCTCCACTCCATCATC 59.632 50.000 0.00 0.00 0.00 2.92
643 644 2.369203 CTGCAGATCTCCACTCCATCAT 59.631 50.000 8.42 0.00 0.00 2.45
644 645 1.761198 CTGCAGATCTCCACTCCATCA 59.239 52.381 8.42 0.00 0.00 3.07
645 646 2.036217 CTCTGCAGATCTCCACTCCATC 59.964 54.545 18.63 0.00 0.00 3.51
646 647 2.040939 CTCTGCAGATCTCCACTCCAT 58.959 52.381 18.63 0.00 0.00 3.41
647 648 1.272928 ACTCTGCAGATCTCCACTCCA 60.273 52.381 18.63 0.00 0.00 3.86
648 649 1.136695 CACTCTGCAGATCTCCACTCC 59.863 57.143 18.63 0.00 0.00 3.85
649 650 2.098614 TCACTCTGCAGATCTCCACTC 58.901 52.381 18.63 0.00 0.00 3.51
650 651 2.101783 CTCACTCTGCAGATCTCCACT 58.898 52.381 18.63 0.00 0.00 4.00
651 652 1.471327 GCTCACTCTGCAGATCTCCAC 60.471 57.143 18.63 1.90 0.00 4.02
652 653 0.822811 GCTCACTCTGCAGATCTCCA 59.177 55.000 18.63 0.00 0.00 3.86
653 654 1.067516 GAGCTCACTCTGCAGATCTCC 59.932 57.143 18.63 5.21 40.03 3.71
654 655 1.268692 CGAGCTCACTCTGCAGATCTC 60.269 57.143 18.63 16.01 41.09 2.75
655 656 0.740149 CGAGCTCACTCTGCAGATCT 59.260 55.000 18.63 9.34 41.09 2.75
656 657 0.737804 TCGAGCTCACTCTGCAGATC 59.262 55.000 18.63 9.79 41.09 2.75
657 658 0.740149 CTCGAGCTCACTCTGCAGAT 59.260 55.000 18.63 0.00 41.09 2.90
658 659 0.322008 TCTCGAGCTCACTCTGCAGA 60.322 55.000 17.19 17.19 41.09 4.26
659 660 0.179166 GTCTCGAGCTCACTCTGCAG 60.179 60.000 15.40 7.63 41.09 4.41
660 661 0.890996 TGTCTCGAGCTCACTCTGCA 60.891 55.000 15.40 1.67 41.09 4.41
661 662 0.179166 CTGTCTCGAGCTCACTCTGC 60.179 60.000 15.40 0.00 41.09 4.26
662 663 1.447945 TCTGTCTCGAGCTCACTCTG 58.552 55.000 15.40 5.33 41.09 3.35
663 664 2.192664 TTCTGTCTCGAGCTCACTCT 57.807 50.000 15.40 0.00 41.09 3.24
664 665 2.479389 CCATTCTGTCTCGAGCTCACTC 60.479 54.545 15.40 1.51 39.75 3.51
665 666 1.476085 CCATTCTGTCTCGAGCTCACT 59.524 52.381 15.40 0.00 0.00 3.41
666 667 1.919918 CCATTCTGTCTCGAGCTCAC 58.080 55.000 15.40 5.06 0.00 3.51
667 668 0.174389 GCCATTCTGTCTCGAGCTCA 59.826 55.000 15.40 8.65 0.00 4.26
668 669 0.174389 TGCCATTCTGTCTCGAGCTC 59.826 55.000 7.81 2.73 0.00 4.09
669 670 0.175302 CTGCCATTCTGTCTCGAGCT 59.825 55.000 7.81 0.00 0.00 4.09
670 671 0.174389 TCTGCCATTCTGTCTCGAGC 59.826 55.000 7.81 3.58 0.00 5.03
671 672 2.662006 TTCTGCCATTCTGTCTCGAG 57.338 50.000 5.93 5.93 0.00 4.04
672 673 2.300152 ACTTTCTGCCATTCTGTCTCGA 59.700 45.455 0.00 0.00 0.00 4.04
673 674 2.414481 CACTTTCTGCCATTCTGTCTCG 59.586 50.000 0.00 0.00 0.00 4.04
674 675 3.668447 TCACTTTCTGCCATTCTGTCTC 58.332 45.455 0.00 0.00 0.00 3.36
675 676 3.672808 CTCACTTTCTGCCATTCTGTCT 58.327 45.455 0.00 0.00 0.00 3.41
676 677 2.161211 GCTCACTTTCTGCCATTCTGTC 59.839 50.000 0.00 0.00 0.00 3.51
677 678 2.157738 GCTCACTTTCTGCCATTCTGT 58.842 47.619 0.00 0.00 0.00 3.41
678 679 1.129998 CGCTCACTTTCTGCCATTCTG 59.870 52.381 0.00 0.00 0.00 3.02
679 680 1.446907 CGCTCACTTTCTGCCATTCT 58.553 50.000 0.00 0.00 0.00 2.40
680 681 0.449388 CCGCTCACTTTCTGCCATTC 59.551 55.000 0.00 0.00 0.00 2.67
681 682 1.589716 GCCGCTCACTTTCTGCCATT 61.590 55.000 0.00 0.00 0.00 3.16
682 683 2.042831 GCCGCTCACTTTCTGCCAT 61.043 57.895 0.00 0.00 0.00 4.40
683 684 2.669569 GCCGCTCACTTTCTGCCA 60.670 61.111 0.00 0.00 0.00 4.92
684 685 3.793144 CGCCGCTCACTTTCTGCC 61.793 66.667 0.00 0.00 0.00 4.85
685 686 3.793144 CCGCCGCTCACTTTCTGC 61.793 66.667 0.00 0.00 0.00 4.26
686 687 2.048222 TCCGCCGCTCACTTTCTG 60.048 61.111 0.00 0.00 0.00 3.02
687 688 2.262915 CTCCGCCGCTCACTTTCT 59.737 61.111 0.00 0.00 0.00 2.52
688 689 2.048127 ACTCCGCCGCTCACTTTC 60.048 61.111 0.00 0.00 0.00 2.62
689 690 2.357517 CACTCCGCCGCTCACTTT 60.358 61.111 0.00 0.00 0.00 2.66
690 691 4.379243 CCACTCCGCCGCTCACTT 62.379 66.667 0.00 0.00 0.00 3.16
692 693 2.292794 TTATCCACTCCGCCGCTCAC 62.293 60.000 0.00 0.00 0.00 3.51
693 694 2.016393 CTTATCCACTCCGCCGCTCA 62.016 60.000 0.00 0.00 0.00 4.26
694 695 1.300233 CTTATCCACTCCGCCGCTC 60.300 63.158 0.00 0.00 0.00 5.03
695 696 1.115930 ATCTTATCCACTCCGCCGCT 61.116 55.000 0.00 0.00 0.00 5.52
696 697 0.601558 TATCTTATCCACTCCGCCGC 59.398 55.000 0.00 0.00 0.00 6.53
697 698 1.887198 ACTATCTTATCCACTCCGCCG 59.113 52.381 0.00 0.00 0.00 6.46
698 699 2.095161 CGACTATCTTATCCACTCCGCC 60.095 54.545 0.00 0.00 0.00 6.13
699 700 2.553172 ACGACTATCTTATCCACTCCGC 59.447 50.000 0.00 0.00 0.00 5.54
700 701 3.188873 GGACGACTATCTTATCCACTCCG 59.811 52.174 0.00 0.00 0.00 4.63
701 702 3.188873 CGGACGACTATCTTATCCACTCC 59.811 52.174 0.00 0.00 0.00 3.85
702 703 3.188873 CCGGACGACTATCTTATCCACTC 59.811 52.174 0.00 0.00 0.00 3.51
703 704 3.147629 CCGGACGACTATCTTATCCACT 58.852 50.000 0.00 0.00 0.00 4.00
704 705 2.883386 ACCGGACGACTATCTTATCCAC 59.117 50.000 9.46 0.00 0.00 4.02
705 706 3.144506 GACCGGACGACTATCTTATCCA 58.855 50.000 9.46 0.00 0.00 3.41
706 707 2.159234 CGACCGGACGACTATCTTATCC 59.841 54.545 21.84 0.00 35.09 2.59
707 708 2.805099 ACGACCGGACGACTATCTTATC 59.195 50.000 31.92 1.26 37.03 1.75
708 709 2.547211 CACGACCGGACGACTATCTTAT 59.453 50.000 31.92 3.80 37.03 1.73
709 710 1.935873 CACGACCGGACGACTATCTTA 59.064 52.381 31.92 0.00 37.03 2.10
710 711 0.731417 CACGACCGGACGACTATCTT 59.269 55.000 31.92 5.38 37.03 2.40
711 712 1.712977 GCACGACCGGACGACTATCT 61.713 60.000 31.92 6.17 37.03 1.98
712 713 1.298190 GCACGACCGGACGACTATC 60.298 63.158 31.92 11.79 37.03 2.08
713 714 1.310933 AAGCACGACCGGACGACTAT 61.311 55.000 31.92 12.66 37.03 2.12
714 715 1.915614 GAAGCACGACCGGACGACTA 61.916 60.000 31.92 0.00 37.03 2.59
715 716 3.264866 GAAGCACGACCGGACGACT 62.265 63.158 31.92 23.58 37.03 4.18
716 717 2.804090 GAAGCACGACCGGACGAC 60.804 66.667 31.92 21.85 37.03 4.34
717 718 4.394078 CGAAGCACGACCGGACGA 62.394 66.667 31.92 0.00 45.77 4.20
718 719 4.695231 ACGAAGCACGACCGGACG 62.695 66.667 24.38 24.38 45.77 4.79
719 720 2.355481 AACGAAGCACGACCGGAC 60.355 61.111 9.46 0.00 45.77 4.79
720 721 2.049802 GAACGAAGCACGACCGGA 60.050 61.111 9.46 0.00 45.77 5.14
721 722 2.355363 TGAACGAAGCACGACCGG 60.355 61.111 0.00 0.00 45.77 5.28
722 723 3.000080 GCTGAACGAAGCACGACCG 62.000 63.158 10.05 0.00 45.77 4.79
723 724 2.668280 GGCTGAACGAAGCACGACC 61.668 63.158 10.05 2.57 45.43 4.79
724 725 2.668280 GGGCTGAACGAAGCACGAC 61.668 63.158 10.05 4.84 45.43 4.34
725 726 2.357034 GGGCTGAACGAAGCACGA 60.357 61.111 10.05 0.00 45.43 4.35
727 728 1.959226 TTCGGGCTGAACGAAGCAC 60.959 57.895 4.22 6.74 44.41 4.40
728 729 2.423874 TTCGGGCTGAACGAAGCA 59.576 55.556 4.22 0.00 44.41 3.91
732 733 2.435938 GGCATTCGGGCTGAACGA 60.436 61.111 11.68 0.00 40.00 3.85
733 734 3.508840 GGGCATTCGGGCTGAACG 61.509 66.667 11.68 3.92 40.00 3.95
734 735 2.361104 TGGGCATTCGGGCTGAAC 60.361 61.111 11.68 0.00 40.00 3.18
735 736 2.361104 GTGGGCATTCGGGCTGAA 60.361 61.111 11.85 11.85 42.84 3.02
736 737 2.705312 TTTGTGGGCATTCGGGCTGA 62.705 55.000 0.00 0.00 42.84 4.26
737 738 1.814772 TTTTGTGGGCATTCGGGCTG 61.815 55.000 0.00 0.00 42.84 4.85
738 739 1.532794 TTTTGTGGGCATTCGGGCT 60.533 52.632 0.00 0.00 42.84 5.19
739 740 1.374125 GTTTTGTGGGCATTCGGGC 60.374 57.895 0.00 0.00 42.44 6.13
740 741 0.607620 ATGTTTTGTGGGCATTCGGG 59.392 50.000 0.00 0.00 0.00 5.14
741 742 1.271934 TCATGTTTTGTGGGCATTCGG 59.728 47.619 0.00 0.00 0.00 4.30
742 743 2.327568 GTCATGTTTTGTGGGCATTCG 58.672 47.619 0.00 0.00 0.00 3.34
743 744 2.288152 ACGTCATGTTTTGTGGGCATTC 60.288 45.455 0.00 0.00 0.00 2.67
744 745 1.686052 ACGTCATGTTTTGTGGGCATT 59.314 42.857 0.00 0.00 0.00 3.56
745 746 1.000385 CACGTCATGTTTTGTGGGCAT 60.000 47.619 0.00 0.00 0.00 4.40
746 747 0.383590 CACGTCATGTTTTGTGGGCA 59.616 50.000 0.00 0.00 0.00 5.36
747 748 0.318614 CCACGTCATGTTTTGTGGGC 60.319 55.000 15.73 0.00 46.37 5.36
748 749 3.863681 CCACGTCATGTTTTGTGGG 57.136 52.632 15.73 0.00 46.37 4.61
750 751 1.851666 GTTGCCACGTCATGTTTTGTG 59.148 47.619 0.00 0.00 0.00 3.33
751 752 1.202359 GGTTGCCACGTCATGTTTTGT 60.202 47.619 0.00 0.00 0.00 2.83
752 753 1.486439 GGTTGCCACGTCATGTTTTG 58.514 50.000 0.00 0.00 0.00 2.44
753 754 0.030101 CGGTTGCCACGTCATGTTTT 59.970 50.000 0.00 0.00 0.00 2.43
754 755 1.652012 CGGTTGCCACGTCATGTTT 59.348 52.632 0.00 0.00 0.00 2.83
755 756 2.903547 GCGGTTGCCACGTCATGTT 61.904 57.895 0.00 0.00 33.98 2.71
756 757 3.353836 GCGGTTGCCACGTCATGT 61.354 61.111 0.00 0.00 33.98 3.21
757 758 3.027170 GAGCGGTTGCCACGTCATG 62.027 63.158 0.00 0.00 44.31 3.07
758 759 2.742372 GAGCGGTTGCCACGTCAT 60.742 61.111 0.00 0.00 44.31 3.06
759 760 4.980805 GGAGCGGTTGCCACGTCA 62.981 66.667 0.00 0.00 44.31 4.35
773 774 2.911819 TGCGATTTTTAAAGCGGGAG 57.088 45.000 13.75 0.00 46.71 4.30
774 775 3.644884 TTTGCGATTTTTAAAGCGGGA 57.355 38.095 13.75 0.00 46.71 5.14
775 776 3.001168 CGATTTGCGATTTTTAAAGCGGG 60.001 43.478 13.75 0.00 46.71 6.13
776 777 3.539401 GCGATTTGCGATTTTTAAAGCGG 60.539 43.478 13.75 0.00 46.71 5.52
790 791 1.819632 ACCCTCCATCGCGATTTGC 60.820 57.895 21.14 0.00 41.47 3.68
791 792 0.461870 TCACCCTCCATCGCGATTTG 60.462 55.000 21.14 13.93 0.00 2.32
792 793 0.469917 ATCACCCTCCATCGCGATTT 59.530 50.000 21.14 0.00 0.00 2.17
793 794 0.250038 CATCACCCTCCATCGCGATT 60.250 55.000 21.14 0.00 0.00 3.34
794 795 1.368950 CATCACCCTCCATCGCGAT 59.631 57.895 17.62 17.62 0.00 4.58
795 796 2.796193 CCATCACCCTCCATCGCGA 61.796 63.158 13.09 13.09 0.00 5.87
796 797 2.280389 CCATCACCCTCCATCGCG 60.280 66.667 0.00 0.00 0.00 5.87
797 798 0.533755 CTTCCATCACCCTCCATCGC 60.534 60.000 0.00 0.00 0.00 4.58
798 799 0.533755 GCTTCCATCACCCTCCATCG 60.534 60.000 0.00 0.00 0.00 3.84
799 800 0.533755 CGCTTCCATCACCCTCCATC 60.534 60.000 0.00 0.00 0.00 3.51
800 801 1.274703 ACGCTTCCATCACCCTCCAT 61.275 55.000 0.00 0.00 0.00 3.41
801 802 1.488705 AACGCTTCCATCACCCTCCA 61.489 55.000 0.00 0.00 0.00 3.86
802 803 0.744771 GAACGCTTCCATCACCCTCC 60.745 60.000 0.00 0.00 0.00 4.30
803 804 1.084370 CGAACGCTTCCATCACCCTC 61.084 60.000 0.00 0.00 0.00 4.30
804 805 1.079127 CGAACGCTTCCATCACCCT 60.079 57.895 0.00 0.00 0.00 4.34
805 806 2.106683 CCGAACGCTTCCATCACCC 61.107 63.158 0.00 0.00 0.00 4.61
806 807 2.106683 CCCGAACGCTTCCATCACC 61.107 63.158 0.00 0.00 0.00 4.02
807 808 2.750888 GCCCGAACGCTTCCATCAC 61.751 63.158 0.00 0.00 0.00 3.06
808 809 2.435938 GCCCGAACGCTTCCATCA 60.436 61.111 0.00 0.00 0.00 3.07
809 810 3.564027 CGCCCGAACGCTTCCATC 61.564 66.667 0.00 0.00 0.00 3.51
810 811 3.599285 TTCGCCCGAACGCTTCCAT 62.599 57.895 0.00 0.00 0.00 3.41
811 812 4.302509 TTCGCCCGAACGCTTCCA 62.303 61.111 0.00 0.00 0.00 3.53
812 813 3.488090 CTTCGCCCGAACGCTTCC 61.488 66.667 0.00 0.00 0.00 3.46
813 814 2.737376 ACTTCGCCCGAACGCTTC 60.737 61.111 0.00 0.00 0.00 3.86
814 815 3.041940 CACTTCGCCCGAACGCTT 61.042 61.111 0.00 0.00 0.00 4.68
815 816 3.802418 AACACTTCGCCCGAACGCT 62.802 57.895 0.00 0.00 0.00 5.07
816 817 2.383027 AAAACACTTCGCCCGAACGC 62.383 55.000 0.00 0.00 0.00 4.84
817 818 0.028374 AAAAACACTTCGCCCGAACG 59.972 50.000 0.00 0.00 0.00 3.95
818 819 1.202211 ACAAAAACACTTCGCCCGAAC 60.202 47.619 0.00 0.00 0.00 3.95
819 820 1.096416 ACAAAAACACTTCGCCCGAA 58.904 45.000 2.92 2.92 0.00 4.30
820 821 0.378962 CACAAAAACACTTCGCCCGA 59.621 50.000 0.00 0.00 0.00 5.14
821 822 1.206115 GCACAAAAACACTTCGCCCG 61.206 55.000 0.00 0.00 0.00 6.13
822 823 0.179124 TGCACAAAAACACTTCGCCC 60.179 50.000 0.00 0.00 0.00 6.13
823 824 1.323235 GTTGCACAAAAACACTTCGCC 59.677 47.619 0.00 0.00 0.00 5.54
824 825 1.989165 TGTTGCACAAAAACACTTCGC 59.011 42.857 0.00 0.00 32.71 4.70
830 831 2.320367 GACACGTGTTGCACAAAAACA 58.680 42.857 24.26 0.00 35.22 2.83
831 832 1.316152 CGACACGTGTTGCACAAAAAC 59.684 47.619 24.26 4.59 33.40 2.43
832 833 1.607713 CGACACGTGTTGCACAAAAA 58.392 45.000 24.26 0.00 33.40 1.94
833 834 0.179187 CCGACACGTGTTGCACAAAA 60.179 50.000 27.46 0.00 33.40 2.44
834 835 1.425825 CCGACACGTGTTGCACAAA 59.574 52.632 27.46 0.00 33.40 2.83
835 836 3.094154 CCGACACGTGTTGCACAA 58.906 55.556 27.46 0.00 33.40 3.33
836 837 3.568743 GCCGACACGTGTTGCACA 61.569 61.111 28.55 0.00 33.40 4.57
837 838 4.643385 CGCCGACACGTGTTGCAC 62.643 66.667 30.74 23.03 0.00 4.57
845 846 0.233848 AAAAAGCTAACGCCGACACG 59.766 50.000 0.00 0.00 36.60 4.49
846 847 1.399343 GGAAAAAGCTAACGCCGACAC 60.399 52.381 0.00 0.00 36.60 3.67
847 848 0.869730 GGAAAAAGCTAACGCCGACA 59.130 50.000 0.00 0.00 36.60 4.35
848 849 0.869730 TGGAAAAAGCTAACGCCGAC 59.130 50.000 0.00 0.00 36.60 4.79
849 850 1.533731 CTTGGAAAAAGCTAACGCCGA 59.466 47.619 0.00 0.00 36.60 5.54
850 851 1.533731 TCTTGGAAAAAGCTAACGCCG 59.466 47.619 0.00 0.00 36.60 6.46
851 852 3.850122 ATCTTGGAAAAAGCTAACGCC 57.150 42.857 0.00 0.00 36.60 5.68
852 853 6.806739 ACATTAATCTTGGAAAAAGCTAACGC 59.193 34.615 0.00 0.00 0.00 4.84
853 854 8.742554 AACATTAATCTTGGAAAAAGCTAACG 57.257 30.769 0.00 0.00 0.00 3.18
854 855 8.850452 CGAACATTAATCTTGGAAAAAGCTAAC 58.150 33.333 0.00 0.00 0.00 2.34
855 856 8.026607 CCGAACATTAATCTTGGAAAAAGCTAA 58.973 33.333 0.00 0.00 0.00 3.09
856 857 7.535139 CCGAACATTAATCTTGGAAAAAGCTA 58.465 34.615 0.00 0.00 0.00 3.32
857 858 6.389906 CCGAACATTAATCTTGGAAAAAGCT 58.610 36.000 0.00 0.00 0.00 3.74
858 859 5.062183 GCCGAACATTAATCTTGGAAAAAGC 59.938 40.000 4.96 0.00 0.00 3.51
859 860 5.286082 CGCCGAACATTAATCTTGGAAAAAG 59.714 40.000 4.96 0.00 0.00 2.27
860 861 5.157781 CGCCGAACATTAATCTTGGAAAAA 58.842 37.500 4.96 0.00 0.00 1.94
861 862 4.216687 ACGCCGAACATTAATCTTGGAAAA 59.783 37.500 0.00 0.00 0.00 2.29
862 863 3.754323 ACGCCGAACATTAATCTTGGAAA 59.246 39.130 0.00 0.00 0.00 3.13
863 864 3.340034 ACGCCGAACATTAATCTTGGAA 58.660 40.909 0.00 0.00 0.00 3.53
864 865 2.980568 ACGCCGAACATTAATCTTGGA 58.019 42.857 0.00 0.00 0.00 3.53
865 866 3.757745 AACGCCGAACATTAATCTTGG 57.242 42.857 0.00 0.00 0.00 3.61
866 867 7.535940 TCTTTTTAACGCCGAACATTAATCTTG 59.464 33.333 0.00 0.00 0.00 3.02
867 868 7.586747 TCTTTTTAACGCCGAACATTAATCTT 58.413 30.769 0.00 0.00 0.00 2.40
868 869 7.136289 TCTTTTTAACGCCGAACATTAATCT 57.864 32.000 0.00 0.00 0.00 2.40
875 876 4.083908 GGTACATCTTTTTAACGCCGAACA 60.084 41.667 0.00 0.00 0.00 3.18
876 877 4.083908 TGGTACATCTTTTTAACGCCGAAC 60.084 41.667 0.00 0.00 0.00 3.95
882 883 6.019152 CCATTCGTGGTACATCTTTTTAACG 58.981 40.000 0.00 0.00 44.52 3.18
909 913 8.082242 ACATATTTGGAAACTTCTTTTTCTCGG 58.918 33.333 0.00 0.00 36.02 4.63
910 914 8.905702 CACATATTTGGAAACTTCTTTTTCTCG 58.094 33.333 0.00 0.00 36.02 4.04
914 918 8.482128 TGACCACATATTTGGAAACTTCTTTTT 58.518 29.630 14.93 0.00 39.24 1.94
950 954 2.755650 TCTGCTTCGGAAACAGAGTTC 58.244 47.619 17.44 0.00 35.58 3.01
961 965 1.003355 TTTGGCTCCTCTGCTTCGG 60.003 57.895 0.00 0.00 0.00 4.30
1011 1015 2.962421 GAGGAGAGATTCGAATGGAGGT 59.038 50.000 16.96 0.00 0.00 3.85
1043 1047 4.570874 GGAATGAGGGAGGCGGCC 62.571 72.222 12.11 12.11 0.00 6.13
1044 1048 4.570874 GGGAATGAGGGAGGCGGC 62.571 72.222 0.00 0.00 0.00 6.53
1046 1050 3.878667 GGGGGAATGAGGGAGGCG 61.879 72.222 0.00 0.00 0.00 5.52
1383 1525 1.662446 GACAAAACGCGACTCGGGA 60.662 57.895 21.13 0.00 42.31 5.14
1384 1526 1.219522 AAGACAAAACGCGACTCGGG 61.220 55.000 15.93 13.53 45.13 5.14
1392 1534 0.747852 TTCCCCCAAAGACAAAACGC 59.252 50.000 0.00 0.00 0.00 4.84
1393 1535 2.028876 AGTTCCCCCAAAGACAAAACG 58.971 47.619 0.00 0.00 0.00 3.60
1395 1537 3.028130 GTCAGTTCCCCCAAAGACAAAA 58.972 45.455 0.00 0.00 0.00 2.44
1397 1539 1.850345 AGTCAGTTCCCCCAAAGACAA 59.150 47.619 0.00 0.00 0.00 3.18
1398 1540 1.420138 GAGTCAGTTCCCCCAAAGACA 59.580 52.381 0.00 0.00 0.00 3.41
1399 1541 1.608283 CGAGTCAGTTCCCCCAAAGAC 60.608 57.143 0.00 0.00 0.00 3.01
1400 1542 0.685097 CGAGTCAGTTCCCCCAAAGA 59.315 55.000 0.00 0.00 0.00 2.52
1401 1543 0.396811 ACGAGTCAGTTCCCCCAAAG 59.603 55.000 0.00 0.00 0.00 2.77
1429 1576 2.566724 GTCCTGCCAAATCCAAATCCAA 59.433 45.455 0.00 0.00 0.00 3.53
1521 1668 2.574006 AATTCAGAGTCAGGCAAGCA 57.426 45.000 0.00 0.00 0.00 3.91
1525 1672 1.888512 GCCAAAATTCAGAGTCAGGCA 59.111 47.619 0.00 0.00 40.50 4.75
1536 1683 6.587608 CCAGACACTTAAATCAGCCAAAATTC 59.412 38.462 0.00 0.00 0.00 2.17
1537 1684 6.267471 TCCAGACACTTAAATCAGCCAAAATT 59.733 34.615 0.00 0.00 0.00 1.82
1538 1685 5.774690 TCCAGACACTTAAATCAGCCAAAAT 59.225 36.000 0.00 0.00 0.00 1.82
1539 1686 5.009610 GTCCAGACACTTAAATCAGCCAAAA 59.990 40.000 0.00 0.00 0.00 2.44
1540 1687 4.518970 GTCCAGACACTTAAATCAGCCAAA 59.481 41.667 0.00 0.00 0.00 3.28
1541 1688 4.072131 GTCCAGACACTTAAATCAGCCAA 58.928 43.478 0.00 0.00 0.00 4.52
1542 1689 3.072330 TGTCCAGACACTTAAATCAGCCA 59.928 43.478 0.00 0.00 36.21 4.75
1557 1704 4.963318 AATTCAGAACAGACTGTCCAGA 57.037 40.909 8.93 4.25 38.79 3.86
1595 1742 0.877071 GTCCATCACAACCTGCACAG 59.123 55.000 0.00 0.00 0.00 3.66
1679 1826 3.492309 CCGCAAGAGCAGAGTTATCTCAT 60.492 47.826 3.70 0.00 40.99 2.90
1680 1827 2.159184 CCGCAAGAGCAGAGTTATCTCA 60.159 50.000 3.70 0.00 40.99 3.27
1704 1851 0.105039 CCTCTAGAATGACCGGCCAC 59.895 60.000 0.00 0.00 0.00 5.01
1705 1852 1.686325 GCCTCTAGAATGACCGGCCA 61.686 60.000 0.00 0.00 0.00 5.36
1706 1853 1.069935 GCCTCTAGAATGACCGGCC 59.930 63.158 0.00 0.00 0.00 6.13
1714 1861 4.162509 GGACAAACACTAGGCCTCTAGAAT 59.837 45.833 9.68 0.00 44.35 2.40
1725 1872 6.471233 TCTATCATCCAGGACAAACACTAG 57.529 41.667 0.00 0.00 0.00 2.57
1750 1897 4.899352 ACTAACAAAGCAGGAGAGACAT 57.101 40.909 0.00 0.00 0.00 3.06
1859 2006 1.303317 AACCCAGCACACCGAATCC 60.303 57.895 0.00 0.00 0.00 3.01
1865 2012 1.463553 CCTTTGGAACCCAGCACACC 61.464 60.000 0.00 0.00 33.81 4.16
1876 2023 1.830477 AGTGCAAAACTGCCTTTGGAA 59.170 42.857 0.00 0.00 38.21 3.53
1933 2164 2.425392 GGATTGAGGAGGGCCATTTCAT 60.425 50.000 6.18 0.00 36.29 2.57
2027 2258 8.825667 AACTGACAGATTAGAGTTCTTTCTTC 57.174 34.615 10.08 0.00 0.00 2.87
2035 2266 5.474578 TGCAGAACTGACAGATTAGAGTT 57.525 39.130 10.08 0.00 0.00 3.01
2037 2268 6.370994 ACAAATGCAGAACTGACAGATTAGAG 59.629 38.462 10.08 0.00 0.00 2.43
2039 2270 6.492007 ACAAATGCAGAACTGACAGATTAG 57.508 37.500 10.08 0.00 0.00 1.73
2040 2271 6.882610 AACAAATGCAGAACTGACAGATTA 57.117 33.333 10.08 0.00 0.00 1.75
2061 2292 5.470098 ACATGTCACATCTGTAAGGACAAAC 59.530 40.000 0.00 0.00 41.30 2.93
2091 2344 9.346725 GCAAAAGATATTTATTAGCAGCCATAC 57.653 33.333 0.00 0.00 0.00 2.39
2092 2345 8.522830 GGCAAAAGATATTTATTAGCAGCCATA 58.477 33.333 0.00 0.00 36.03 2.74
2093 2346 7.015487 TGGCAAAAGATATTTATTAGCAGCCAT 59.985 33.333 0.00 0.00 40.57 4.40
2094 2347 6.323482 TGGCAAAAGATATTTATTAGCAGCCA 59.677 34.615 0.00 0.00 42.89 4.75
2095 2348 6.748132 TGGCAAAAGATATTTATTAGCAGCC 58.252 36.000 0.00 0.00 36.50 4.85
2096 2349 7.651808 TCTGGCAAAAGATATTTATTAGCAGC 58.348 34.615 0.00 0.00 0.00 5.25
2138 2391 5.363292 TGGTGGTTATTATACTACAGGCGAA 59.637 40.000 0.00 0.00 31.79 4.70
2193 2451 4.923871 GCTCACTGTTAGAAGATCGAACAA 59.076 41.667 7.31 0.00 40.50 2.83
2201 2459 4.220821 CAGGTAAGGCTCACTGTTAGAAGA 59.779 45.833 0.00 0.00 0.00 2.87
2323 2586 1.353091 AGGAGGAAAGGACACAGGTC 58.647 55.000 0.00 0.00 43.55 3.85
2424 2694 6.113411 ACCCTACTTGTGTTCATATTAGCAC 58.887 40.000 0.00 0.00 0.00 4.40
2483 2844 9.802039 AGTAAACAGTCTTCAAATACCCAATAA 57.198 29.630 0.00 0.00 0.00 1.40
2484 2845 9.802039 AAGTAAACAGTCTTCAAATACCCAATA 57.198 29.630 0.00 0.00 0.00 1.90
2512 2873 8.292448 GGCATAATGGATATGGATATAAAAGCG 58.708 37.037 0.00 0.00 41.51 4.68
2514 2875 9.082313 GGGGCATAATGGATATGGATATAAAAG 57.918 37.037 0.00 0.00 41.51 2.27
2522 2886 4.971066 ATTGGGGCATAATGGATATGGA 57.029 40.909 0.00 0.00 41.51 3.41
2537 2901 1.005924 ACAACCTTCCTGCTATTGGGG 59.994 52.381 0.00 0.00 0.00 4.96
2615 2979 2.890808 TGACCACGATCTTATCAGCC 57.109 50.000 0.00 0.00 0.00 4.85
2653 3017 8.410141 AGAAGGAATGTAAAGATAAGAGTCTCG 58.590 37.037 0.00 0.00 0.00 4.04
2674 3038 8.347035 TGGACGAACTAATTTTAACAAAGAAGG 58.653 33.333 0.00 0.00 0.00 3.46
2676 3040 8.895737 AGTGGACGAACTAATTTTAACAAAGAA 58.104 29.630 0.00 0.00 0.00 2.52
2686 3050 4.957296 ACACAGAGTGGACGAACTAATTT 58.043 39.130 1.93 0.00 37.94 1.82
2689 3053 3.491964 CCAACACAGAGTGGACGAACTAA 60.492 47.826 1.93 0.00 37.94 2.24
2696 3060 2.568623 AATCCCAACACAGAGTGGAC 57.431 50.000 1.93 0.00 37.94 4.02
2698 3062 4.588899 TCAATAATCCCAACACAGAGTGG 58.411 43.478 1.93 0.00 37.94 4.00
2752 3150 6.892456 TCTCTGAAGGAACTACATGTCTGTAT 59.108 38.462 0.00 0.00 38.49 2.29
2754 3152 5.080337 TCTCTGAAGGAACTACATGTCTGT 58.920 41.667 0.00 0.00 38.49 3.41
2807 3205 8.236586 CACAAACTTAATGTCTTGCTTATGCTA 58.763 33.333 1.96 0.00 40.48 3.49
2824 3222 9.945904 AAACCAATTTTAGGAAACACAAACTTA 57.054 25.926 0.00 0.00 0.00 2.24
2842 3240 4.586001 AGAGAGTCACATGCAAAACCAATT 59.414 37.500 0.00 0.00 0.00 2.32
2858 3256 6.793492 ACAAAAATAGCTGAACAGAGAGTC 57.207 37.500 5.97 0.00 0.00 3.36
2908 3308 6.041979 AGTGCAAACAGGGAAAATAAGAATGT 59.958 34.615 0.00 0.00 0.00 2.71
2936 3336 7.651304 CACTGCCAACTCAACATTAATTAACAA 59.349 33.333 0.00 0.00 0.00 2.83
2946 3346 0.956633 CTGCACTGCCAACTCAACAT 59.043 50.000 0.00 0.00 0.00 2.71
2959 3359 3.079578 CTCAACATCAACATCCTGCACT 58.920 45.455 0.00 0.00 0.00 4.40
3267 3672 8.896320 TTGCTTGTACTAGTGAAATACTTTCA 57.104 30.769 5.39 0.00 46.68 2.69
3392 3811 9.088987 AGATGATGCCTCCTTTAAAACTTAAAA 57.911 29.630 0.00 0.00 0.00 1.52
3672 4093 3.841643 CAGAAGTCACCATGCAAAATCC 58.158 45.455 0.00 0.00 0.00 3.01
4158 4587 7.148154 CGGAAATATTCACCATAAGGAAACACA 60.148 37.037 10.75 0.00 38.69 3.72
4176 4605 7.645058 ACACTTCAATTGGAATCGGAAATAT 57.355 32.000 5.42 0.00 34.32 1.28
4360 4791 8.783999 AAAGTCGTATAGTAAGATGAACATCG 57.216 34.615 8.79 0.00 42.48 3.84
4375 4806 9.615295 GGAAAAATGTTGCTAAAAAGTCGTATA 57.385 29.630 0.00 0.00 0.00 1.47
4380 4811 7.770801 ACAGGAAAAATGTTGCTAAAAAGTC 57.229 32.000 0.00 0.00 0.00 3.01
4401 4832 7.672983 ATTTGGATGACACTAACAGTAACAG 57.327 36.000 0.00 0.00 0.00 3.16
4402 4833 7.040755 CCAATTTGGATGACACTAACAGTAACA 60.041 37.037 10.03 0.00 40.96 2.41
4403 4834 7.040686 ACCAATTTGGATGACACTAACAGTAAC 60.041 37.037 22.19 0.00 40.96 2.50
4404 4835 7.001674 ACCAATTTGGATGACACTAACAGTAA 58.998 34.615 22.19 0.00 40.96 2.24
4405 4836 6.539173 ACCAATTTGGATGACACTAACAGTA 58.461 36.000 22.19 0.00 40.96 2.74
4406 4837 5.385198 ACCAATTTGGATGACACTAACAGT 58.615 37.500 22.19 0.00 40.96 3.55
4560 4994 7.201626 GCAGCCATAAATTAAATTGCATTCACA 60.202 33.333 0.00 0.00 0.00 3.58
4764 5201 2.167075 GAGACCAAAGCCATGAATTGGG 59.833 50.000 20.86 12.92 46.26 4.12
4773 5210 1.214175 TCAAACCAGAGACCAAAGCCA 59.786 47.619 0.00 0.00 0.00 4.75
4950 5387 8.462589 AAGTGTTTGAAATGGCCATTTTAATT 57.537 26.923 35.47 26.97 40.77 1.40
5016 5460 3.242739 TGCAAAAGACGAGAAGAGCAAAC 60.243 43.478 0.00 0.00 0.00 2.93
5153 5597 4.219944 TGGTAGACAGAAACTTACGAGCAT 59.780 41.667 0.00 0.00 0.00 3.79
5263 5708 2.482414 ACCCATAAGGACCGATGGTA 57.518 50.000 20.88 0.00 41.00 3.25
5270 5715 2.502142 AAACCGAACCCATAAGGACC 57.498 50.000 0.00 0.00 39.89 4.46
5310 5755 5.451662 CAGCGTGACGTAATAGAGAGTTTAC 59.548 44.000 6.91 0.00 0.00 2.01
5319 5764 3.499048 ACTGAACAGCGTGACGTAATAG 58.501 45.455 6.91 0.99 0.00 1.73
5966 6414 1.062002 GCAGATAGTTAGCGCGCAAAA 59.938 47.619 35.10 23.74 0.00 2.44
6086 6534 2.747446 ACTTGCACGGTCATACCATTTC 59.253 45.455 0.00 0.00 38.47 2.17
6171 6715 1.814394 AGTCGCGGAGTACACACATTA 59.186 47.619 6.13 0.00 0.00 1.90
6173 6717 0.109272 CAGTCGCGGAGTACACACAT 60.109 55.000 6.13 0.00 0.00 3.21
6187 6731 3.238108 AGGAAATGTACAGCTCAGTCG 57.762 47.619 0.33 0.00 0.00 4.18
6191 6735 4.890158 TCAGAAGGAAATGTACAGCTCA 57.110 40.909 0.33 0.00 0.00 4.26
6206 6750 5.579904 CCGCATATGAATACAGGATCAGAAG 59.420 44.000 6.97 0.00 0.00 2.85
6246 6790 6.869913 ACCGTACGATTTTTCAGATTTAGTGA 59.130 34.615 18.76 0.00 0.00 3.41
6264 6808 4.241999 CCGCCTACCGACCGTACG 62.242 72.222 8.69 8.69 40.02 3.67
6265 6809 4.559229 GCCGCCTACCGACCGTAC 62.559 72.222 0.00 0.00 40.02 3.67
6272 6816 4.524318 ACCAATCGCCGCCTACCG 62.524 66.667 0.00 0.00 0.00 4.02
6307 6851 4.590918 TGGCCTCCACAATTTTTATCGTA 58.409 39.130 3.32 0.00 0.00 3.43
6308 6852 3.426615 TGGCCTCCACAATTTTTATCGT 58.573 40.909 3.32 0.00 0.00 3.73
6321 6865 1.067295 AGACTTTCATGTGGCCTCCA 58.933 50.000 3.32 0.17 0.00 3.86
6322 6866 1.457346 CAGACTTTCATGTGGCCTCC 58.543 55.000 3.32 0.00 0.00 4.30
6323 6867 0.807496 GCAGACTTTCATGTGGCCTC 59.193 55.000 3.32 0.00 0.00 4.70
6324 6868 0.957395 CGCAGACTTTCATGTGGCCT 60.957 55.000 3.32 0.00 0.00 5.19
6325 6869 1.503542 CGCAGACTTTCATGTGGCC 59.496 57.895 0.00 0.00 0.00 5.36
6326 6870 1.503542 CCGCAGACTTTCATGTGGC 59.496 57.895 0.00 0.00 40.00 5.01
6327 6871 1.308069 CCCCGCAGACTTTCATGTGG 61.308 60.000 0.00 0.00 44.92 4.17
6328 6872 1.308069 CCCCCGCAGACTTTCATGTG 61.308 60.000 0.00 0.00 0.00 3.21
6329 6873 1.002134 CCCCCGCAGACTTTCATGT 60.002 57.895 0.00 0.00 0.00 3.21
6330 6874 2.409870 GCCCCCGCAGACTTTCATG 61.410 63.158 0.00 0.00 34.03 3.07
6331 6875 2.044946 GCCCCCGCAGACTTTCAT 60.045 61.111 0.00 0.00 34.03 2.57
6343 6887 1.341209 GATTCCAATCGATTTGCCCCC 59.659 52.381 8.21 0.00 33.73 5.40
6347 6891 2.689983 ACCCTGATTCCAATCGATTTGC 59.310 45.455 8.21 0.00 38.26 3.68
6380 6924 5.428496 TCAGAAGCTCACAATTGAAGTTG 57.572 39.130 13.59 0.00 35.25 3.16
6518 7957 4.319333 GCTCAAAGTGTTCATGTGAGTGAG 60.319 45.833 8.50 7.30 38.36 3.51
6531 7970 1.532868 GCATTCGAGTGCTCAAAGTGT 59.467 47.619 24.00 0.00 41.82 3.55
6554 7993 6.820656 AGACTGTTATTTATCACAAGAGGCTG 59.179 38.462 0.00 0.00 30.26 4.85
6574 8013 7.584987 ACAATTATTTTGAAACGGAGAGACTG 58.415 34.615 0.00 0.00 0.00 3.51
6576 8015 8.718734 ACTACAATTATTTTGAAACGGAGAGAC 58.281 33.333 0.00 0.00 0.00 3.36
6758 8197 9.797556 AACTTGTTTAATTTTGACCAAGTCTAC 57.202 29.630 0.00 0.00 33.15 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.