Multiple sequence alignment - TraesCS2D01G557800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G557800 chr2D 100.000 3810 0 0 1 3810 630610953 630607144 0.000000e+00 7036.0
1 TraesCS2D01G557800 chr2D 86.667 255 22 6 3566 3808 477420719 477420973 4.850000e-69 272.0
2 TraesCS2D01G557800 chr2D 83.534 249 19 10 1070 1318 584853818 584854044 2.980000e-51 213.0
3 TraesCS2D01G557800 chr2B 91.269 2829 148 35 381 3148 773564755 773561965 0.000000e+00 3764.0
4 TraesCS2D01G557800 chr2A 91.416 1829 65 37 474 2225 760726701 760724888 0.000000e+00 2423.0
5 TraesCS2D01G557800 chr2A 89.032 930 70 16 2246 3149 760724770 760723847 0.000000e+00 1123.0
6 TraesCS2D01G557800 chr2A 90.968 155 13 1 231 385 333733606 333733759 1.390000e-49 207.0
7 TraesCS2D01G557800 chr2A 90.361 83 6 2 381 462 760727699 760727618 1.450000e-19 108.0
8 TraesCS2D01G557800 chr4D 93.485 660 31 6 3161 3808 391474234 391474893 0.000000e+00 970.0
9 TraesCS2D01G557800 chr4D 89.346 657 27 15 3164 3806 439831025 439830398 0.000000e+00 785.0
10 TraesCS2D01G557800 chr4D 88.889 657 30 24 3164 3806 385581791 385582418 0.000000e+00 769.0
11 TraesCS2D01G557800 chr4D 88.636 660 32 23 3161 3806 145628317 145628947 0.000000e+00 763.0
12 TraesCS2D01G557800 chr4D 96.280 457 17 0 3161 3617 308798640 308799096 0.000000e+00 750.0
13 TraesCS2D01G557800 chr4D 96.970 33 1 0 2437 2469 438148292 438148324 5.320000e-04 56.5
14 TraesCS2D01G557800 chr4A 90.108 647 43 11 3161 3807 714171434 714170809 0.000000e+00 821.0
15 TraesCS2D01G557800 chr4A 100.000 29 0 0 2441 2469 27577823 27577851 2.000000e-03 54.7
16 TraesCS2D01G557800 chr6D 90.062 644 25 7 3164 3795 56794680 56794064 0.000000e+00 798.0
17 TraesCS2D01G557800 chr4B 88.991 654 58 12 3161 3807 667575406 667576052 0.000000e+00 797.0
18 TraesCS2D01G557800 chr4B 89.504 524 55 0 3161 3684 439743379 439743902 0.000000e+00 664.0
19 TraesCS2D01G557800 chr4B 97.368 38 1 0 2431 2468 14386432 14386395 8.830000e-07 65.8
20 TraesCS2D01G557800 chr7B 86.758 657 73 9 3161 3810 640963395 640962746 0.000000e+00 719.0
21 TraesCS2D01G557800 chr3D 93.966 464 28 0 3161 3624 62938506 62938969 0.000000e+00 702.0
22 TraesCS2D01G557800 chr3D 79.596 446 62 7 3363 3807 62945870 62946287 3.720000e-75 292.0
23 TraesCS2D01G557800 chr1D 84.739 249 16 10 1070 1318 418714003 418714229 2.960000e-56 230.0
24 TraesCS2D01G557800 chr5B 94.048 84 2 1 1069 1152 108841925 108841845 1.440000e-24 124.0
25 TraesCS2D01G557800 chr1A 93.023 43 2 1 2434 2476 133426030 133425989 1.140000e-05 62.1
26 TraesCS2D01G557800 chr1B 100.000 31 0 0 2440 2470 667973684 667973654 1.480000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G557800 chr2D 630607144 630610953 3809 True 7036 7036 100.000000 1 3810 1 chr2D.!!$R1 3809
1 TraesCS2D01G557800 chr2B 773561965 773564755 2790 True 3764 3764 91.269000 381 3148 1 chr2B.!!$R1 2767
2 TraesCS2D01G557800 chr2A 760723847 760727699 3852 True 1218 2423 90.269667 381 3149 3 chr2A.!!$R1 2768
3 TraesCS2D01G557800 chr4D 391474234 391474893 659 False 970 970 93.485000 3161 3808 1 chr4D.!!$F4 647
4 TraesCS2D01G557800 chr4D 439830398 439831025 627 True 785 785 89.346000 3164 3806 1 chr4D.!!$R1 642
5 TraesCS2D01G557800 chr4D 385581791 385582418 627 False 769 769 88.889000 3164 3806 1 chr4D.!!$F3 642
6 TraesCS2D01G557800 chr4D 145628317 145628947 630 False 763 763 88.636000 3161 3806 1 chr4D.!!$F1 645
7 TraesCS2D01G557800 chr4A 714170809 714171434 625 True 821 821 90.108000 3161 3807 1 chr4A.!!$R1 646
8 TraesCS2D01G557800 chr6D 56794064 56794680 616 True 798 798 90.062000 3164 3795 1 chr6D.!!$R1 631
9 TraesCS2D01G557800 chr4B 667575406 667576052 646 False 797 797 88.991000 3161 3807 1 chr4B.!!$F2 646
10 TraesCS2D01G557800 chr4B 439743379 439743902 523 False 664 664 89.504000 3161 3684 1 chr4B.!!$F1 523
11 TraesCS2D01G557800 chr7B 640962746 640963395 649 True 719 719 86.758000 3161 3810 1 chr7B.!!$R1 649

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
260 261 0.034337 ACACACGACCATACCCACAC 59.966 55.0 0.00 0.0 0.0 3.82 F
717 1630 0.035439 ACGCCATTCTTGTCCGGATT 60.035 50.0 7.81 0.0 0.0 3.01 F
1984 2966 0.108756 GTCTGACGTTCCTAGGCACC 60.109 60.0 2.96 0.0 0.0 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1474 2438 0.445436 GTTCAATGCTGTCTCCTGCG 59.555 55.0 0.00 0.0 38.28 5.18 R
2707 3804 0.249996 ACTTTGTTGGCCATTGCTGC 60.250 50.0 6.09 0.0 37.74 5.25 R
3131 4255 0.096976 GCGAGCGCTGAAAATTGCTA 59.903 50.0 18.48 0.0 37.91 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.099042 ACGCTTAAGACATTGAATAGGGT 57.901 39.130 6.67 0.00 0.00 4.34
23 24 5.116882 ACGCTTAAGACATTGAATAGGGTC 58.883 41.667 6.67 0.00 0.00 4.46
24 25 5.104900 ACGCTTAAGACATTGAATAGGGTCT 60.105 40.000 6.67 0.00 42.08 3.85
25 26 6.097839 ACGCTTAAGACATTGAATAGGGTCTA 59.902 38.462 6.67 0.00 39.55 2.59
26 27 6.984474 CGCTTAAGACATTGAATAGGGTCTAA 59.016 38.462 6.67 0.00 39.55 2.10
27 28 7.042658 CGCTTAAGACATTGAATAGGGTCTAAC 60.043 40.741 6.67 0.00 39.55 2.34
28 29 7.769044 GCTTAAGACATTGAATAGGGTCTAACA 59.231 37.037 6.67 0.00 39.55 2.41
29 30 9.099454 CTTAAGACATTGAATAGGGTCTAACAC 57.901 37.037 0.00 0.00 39.55 3.32
30 31 5.661458 AGACATTGAATAGGGTCTAACACG 58.339 41.667 0.00 0.00 38.74 4.49
31 32 5.421056 AGACATTGAATAGGGTCTAACACGA 59.579 40.000 0.00 0.00 38.74 4.35
32 33 5.416947 ACATTGAATAGGGTCTAACACGAC 58.583 41.667 0.00 0.00 0.00 4.34
33 34 5.046878 ACATTGAATAGGGTCTAACACGACA 60.047 40.000 0.00 0.00 35.63 4.35
34 35 4.713824 TGAATAGGGTCTAACACGACAG 57.286 45.455 0.00 0.00 35.63 3.51
35 36 3.119245 TGAATAGGGTCTAACACGACAGC 60.119 47.826 0.00 0.00 35.63 4.40
36 37 0.806868 TAGGGTCTAACACGACAGCG 59.193 55.000 0.00 0.00 44.79 5.18
37 38 0.892358 AGGGTCTAACACGACAGCGA 60.892 55.000 0.00 0.00 41.64 4.93
38 39 0.038892 GGGTCTAACACGACAGCGAA 60.039 55.000 0.00 0.00 41.64 4.70
39 40 1.337821 GGTCTAACACGACAGCGAAG 58.662 55.000 0.00 0.00 41.64 3.79
59 60 2.330231 CGTCAAAACGGCATGACATT 57.670 45.000 0.00 0.00 44.84 2.71
60 61 1.978097 CGTCAAAACGGCATGACATTG 59.022 47.619 0.00 0.46 44.84 2.82
61 62 2.350293 CGTCAAAACGGCATGACATTGA 60.350 45.455 0.00 3.19 44.84 2.57
62 63 3.236816 GTCAAAACGGCATGACATTGAG 58.763 45.455 10.71 0.00 44.19 3.02
63 64 3.058293 GTCAAAACGGCATGACATTGAGA 60.058 43.478 10.71 0.00 44.19 3.27
64 65 3.058293 TCAAAACGGCATGACATTGAGAC 60.058 43.478 0.00 0.00 0.00 3.36
65 66 2.183478 AACGGCATGACATTGAGACA 57.817 45.000 0.00 0.00 0.00 3.41
66 67 1.442769 ACGGCATGACATTGAGACAC 58.557 50.000 0.00 0.00 0.00 3.67
67 68 0.729116 CGGCATGACATTGAGACACC 59.271 55.000 0.00 0.00 0.00 4.16
68 69 1.825090 GGCATGACATTGAGACACCA 58.175 50.000 0.00 0.00 0.00 4.17
69 70 1.741706 GGCATGACATTGAGACACCAG 59.258 52.381 0.00 0.00 0.00 4.00
70 71 2.430465 GCATGACATTGAGACACCAGT 58.570 47.619 0.00 0.00 0.00 4.00
71 72 2.161012 GCATGACATTGAGACACCAGTG 59.839 50.000 0.00 0.00 0.00 3.66
73 74 2.837498 TGACATTGAGACACCAGTGTG 58.163 47.619 8.43 0.00 45.05 3.82
74 75 2.433970 TGACATTGAGACACCAGTGTGA 59.566 45.455 8.43 0.00 45.76 3.58
75 76 2.802816 GACATTGAGACACCAGTGTGAC 59.197 50.000 8.43 2.87 45.76 3.67
76 77 1.794701 CATTGAGACACCAGTGTGACG 59.205 52.381 8.43 0.00 45.76 4.35
77 78 0.821517 TTGAGACACCAGTGTGACGT 59.178 50.000 8.43 0.00 45.76 4.34
78 79 1.682740 TGAGACACCAGTGTGACGTA 58.317 50.000 8.43 0.00 45.76 3.57
79 80 2.235891 TGAGACACCAGTGTGACGTAT 58.764 47.619 8.43 0.00 45.76 3.06
80 81 2.030274 TGAGACACCAGTGTGACGTATG 60.030 50.000 8.43 0.00 45.76 2.39
81 82 1.068474 GACACCAGTGTGACGTATGC 58.932 55.000 8.43 0.00 45.76 3.14
82 83 0.666274 ACACCAGTGTGACGTATGCG 60.666 55.000 1.88 0.19 45.76 4.73
83 84 1.736645 ACCAGTGTGACGTATGCGC 60.737 57.895 0.00 0.00 42.83 6.09
84 85 2.689183 CAGTGTGACGTATGCGCG 59.311 61.111 0.00 0.00 42.83 6.86
85 86 1.799916 CAGTGTGACGTATGCGCGA 60.800 57.895 12.10 0.00 42.83 5.87
86 87 1.081041 AGTGTGACGTATGCGCGAA 60.081 52.632 12.10 0.00 42.83 4.70
87 88 1.056750 GTGTGACGTATGCGCGAAC 59.943 57.895 12.10 3.01 42.83 3.95
88 89 1.371881 TGTGACGTATGCGCGAACA 60.372 52.632 12.10 0.00 42.83 3.18
89 90 0.940047 TGTGACGTATGCGCGAACAA 60.940 50.000 12.10 0.00 42.83 2.83
90 91 0.162082 GTGACGTATGCGCGAACAAA 59.838 50.000 12.10 0.00 42.83 2.83
91 92 0.859882 TGACGTATGCGCGAACAAAA 59.140 45.000 12.10 0.00 42.83 2.44
92 93 1.260825 TGACGTATGCGCGAACAAAAA 59.739 42.857 12.10 0.00 42.83 1.94
93 94 1.635660 GACGTATGCGCGAACAAAAAC 59.364 47.619 12.10 0.00 42.83 2.43
94 95 1.003759 ACGTATGCGCGAACAAAAACA 60.004 42.857 12.10 0.00 42.83 2.83
95 96 2.037649 CGTATGCGCGAACAAAAACAA 58.962 42.857 12.10 0.00 0.00 2.83
96 97 2.464380 CGTATGCGCGAACAAAAACAAA 59.536 40.909 12.10 0.00 0.00 2.83
97 98 2.988807 ATGCGCGAACAAAAACAAAC 57.011 40.000 12.10 0.00 0.00 2.93
98 99 1.983972 TGCGCGAACAAAAACAAACT 58.016 40.000 12.10 0.00 0.00 2.66
99 100 2.329379 TGCGCGAACAAAAACAAACTT 58.671 38.095 12.10 0.00 0.00 2.66
100 101 2.731976 TGCGCGAACAAAAACAAACTTT 59.268 36.364 12.10 0.00 0.00 2.66
101 102 3.184581 TGCGCGAACAAAAACAAACTTTT 59.815 34.783 12.10 0.00 0.00 2.27
102 103 4.145276 GCGCGAACAAAAACAAACTTTTT 58.855 34.783 12.10 0.00 32.38 1.94
118 119 8.337532 ACAAACTTTTTGCATTAATCTTGAAGC 58.662 29.630 0.00 0.00 0.00 3.86
119 120 7.425577 AACTTTTTGCATTAATCTTGAAGCC 57.574 32.000 0.00 0.00 0.00 4.35
120 121 5.934043 ACTTTTTGCATTAATCTTGAAGCCC 59.066 36.000 0.00 0.00 0.00 5.19
121 122 5.743636 TTTTGCATTAATCTTGAAGCCCT 57.256 34.783 0.00 0.00 0.00 5.19
122 123 4.724074 TTGCATTAATCTTGAAGCCCTG 57.276 40.909 0.00 0.00 0.00 4.45
123 124 3.966979 TGCATTAATCTTGAAGCCCTGA 58.033 40.909 0.00 0.00 0.00 3.86
124 125 4.539726 TGCATTAATCTTGAAGCCCTGAT 58.460 39.130 0.00 0.00 0.00 2.90
125 126 4.957954 TGCATTAATCTTGAAGCCCTGATT 59.042 37.500 0.00 0.00 34.16 2.57
126 127 5.163488 TGCATTAATCTTGAAGCCCTGATTG 60.163 40.000 0.00 0.00 32.33 2.67
127 128 5.163478 GCATTAATCTTGAAGCCCTGATTGT 60.163 40.000 0.00 0.00 32.33 2.71
128 129 5.902613 TTAATCTTGAAGCCCTGATTGTG 57.097 39.130 0.00 0.00 32.33 3.33
129 130 2.957402 TCTTGAAGCCCTGATTGTGT 57.043 45.000 0.00 0.00 0.00 3.72
130 131 2.507484 TCTTGAAGCCCTGATTGTGTG 58.493 47.619 0.00 0.00 0.00 3.82
131 132 1.542915 CTTGAAGCCCTGATTGTGTGG 59.457 52.381 0.00 0.00 0.00 4.17
132 133 0.478072 TGAAGCCCTGATTGTGTGGT 59.522 50.000 0.00 0.00 0.00 4.16
133 134 0.883833 GAAGCCCTGATTGTGTGGTG 59.116 55.000 0.00 0.00 0.00 4.17
134 135 0.540365 AAGCCCTGATTGTGTGGTGG 60.540 55.000 0.00 0.00 0.00 4.61
135 136 1.074775 GCCCTGATTGTGTGGTGGA 59.925 57.895 0.00 0.00 0.00 4.02
136 137 0.323725 GCCCTGATTGTGTGGTGGAT 60.324 55.000 0.00 0.00 0.00 3.41
137 138 1.064758 GCCCTGATTGTGTGGTGGATA 60.065 52.381 0.00 0.00 0.00 2.59
138 139 2.620367 GCCCTGATTGTGTGGTGGATAA 60.620 50.000 0.00 0.00 0.00 1.75
139 140 3.696045 CCCTGATTGTGTGGTGGATAAA 58.304 45.455 0.00 0.00 0.00 1.40
140 141 4.280819 CCCTGATTGTGTGGTGGATAAAT 58.719 43.478 0.00 0.00 0.00 1.40
141 142 4.711355 CCCTGATTGTGTGGTGGATAAATT 59.289 41.667 0.00 0.00 0.00 1.82
142 143 5.890985 CCCTGATTGTGTGGTGGATAAATTA 59.109 40.000 0.00 0.00 0.00 1.40
143 144 6.039717 CCCTGATTGTGTGGTGGATAAATTAG 59.960 42.308 0.00 0.00 0.00 1.73
144 145 6.603201 CCTGATTGTGTGGTGGATAAATTAGT 59.397 38.462 0.00 0.00 0.00 2.24
145 146 7.122650 CCTGATTGTGTGGTGGATAAATTAGTT 59.877 37.037 0.00 0.00 0.00 2.24
146 147 7.825681 TGATTGTGTGGTGGATAAATTAGTTG 58.174 34.615 0.00 0.00 0.00 3.16
147 148 7.450014 TGATTGTGTGGTGGATAAATTAGTTGT 59.550 33.333 0.00 0.00 0.00 3.32
148 149 6.567687 TGTGTGGTGGATAAATTAGTTGTG 57.432 37.500 0.00 0.00 0.00 3.33
149 150 6.299922 TGTGTGGTGGATAAATTAGTTGTGA 58.700 36.000 0.00 0.00 0.00 3.58
150 151 6.205853 TGTGTGGTGGATAAATTAGTTGTGAC 59.794 38.462 0.00 0.00 0.00 3.67
151 152 6.205853 GTGTGGTGGATAAATTAGTTGTGACA 59.794 38.462 0.00 0.00 0.00 3.58
152 153 6.945435 TGTGGTGGATAAATTAGTTGTGACAT 59.055 34.615 0.00 0.00 0.00 3.06
153 154 8.103935 TGTGGTGGATAAATTAGTTGTGACATA 58.896 33.333 0.00 0.00 0.00 2.29
154 155 9.120538 GTGGTGGATAAATTAGTTGTGACATAT 57.879 33.333 0.00 0.00 0.00 1.78
163 164 8.554490 AATTAGTTGTGACATATACTCCCTCT 57.446 34.615 0.00 0.00 0.00 3.69
164 165 5.860941 AGTTGTGACATATACTCCCTCTG 57.139 43.478 0.00 0.00 0.00 3.35
165 166 5.273208 AGTTGTGACATATACTCCCTCTGT 58.727 41.667 0.00 0.00 0.00 3.41
166 167 5.721960 AGTTGTGACATATACTCCCTCTGTT 59.278 40.000 0.00 0.00 0.00 3.16
167 168 5.854010 TGTGACATATACTCCCTCTGTTC 57.146 43.478 0.00 0.00 0.00 3.18
168 169 4.338400 TGTGACATATACTCCCTCTGTTCG 59.662 45.833 0.00 0.00 0.00 3.95
169 170 4.579340 GTGACATATACTCCCTCTGTTCGA 59.421 45.833 0.00 0.00 0.00 3.71
170 171 4.822350 TGACATATACTCCCTCTGTTCGAG 59.178 45.833 0.00 0.00 39.57 4.04
171 172 4.794334 ACATATACTCCCTCTGTTCGAGT 58.206 43.478 0.00 0.00 40.00 4.18
172 173 4.580995 ACATATACTCCCTCTGTTCGAGTG 59.419 45.833 0.00 0.00 37.43 3.51
173 174 2.873094 TACTCCCTCTGTTCGAGTGA 57.127 50.000 0.00 0.00 37.43 3.41
174 175 2.223803 ACTCCCTCTGTTCGAGTGAT 57.776 50.000 0.00 0.00 38.11 3.06
175 176 3.367646 ACTCCCTCTGTTCGAGTGATA 57.632 47.619 0.00 0.00 38.11 2.15
176 177 3.018149 ACTCCCTCTGTTCGAGTGATAC 58.982 50.000 0.00 0.00 38.11 2.24
177 178 3.283751 CTCCCTCTGTTCGAGTGATACT 58.716 50.000 0.00 0.00 38.11 2.12
178 179 3.697045 CTCCCTCTGTTCGAGTGATACTT 59.303 47.826 0.00 0.00 38.11 2.24
179 180 4.851843 TCCCTCTGTTCGAGTGATACTTA 58.148 43.478 0.00 0.00 38.11 2.24
180 181 5.446860 TCCCTCTGTTCGAGTGATACTTAT 58.553 41.667 0.00 0.00 38.11 1.73
181 182 5.892119 TCCCTCTGTTCGAGTGATACTTATT 59.108 40.000 0.00 0.00 38.11 1.40
182 183 6.380274 TCCCTCTGTTCGAGTGATACTTATTT 59.620 38.462 0.00 0.00 38.11 1.40
183 184 7.042335 CCCTCTGTTCGAGTGATACTTATTTT 58.958 38.462 0.00 0.00 38.11 1.82
184 185 7.010552 CCCTCTGTTCGAGTGATACTTATTTTG 59.989 40.741 0.00 0.00 38.11 2.44
185 186 7.010552 CCTCTGTTCGAGTGATACTTATTTTGG 59.989 40.741 0.00 0.00 38.11 3.28
186 187 7.608153 TCTGTTCGAGTGATACTTATTTTGGA 58.392 34.615 0.00 0.00 0.00 3.53
187 188 8.092068 TCTGTTCGAGTGATACTTATTTTGGAA 58.908 33.333 0.00 0.00 0.00 3.53
188 189 8.610248 TGTTCGAGTGATACTTATTTTGGAAA 57.390 30.769 0.00 0.00 0.00 3.13
189 190 8.717821 TGTTCGAGTGATACTTATTTTGGAAAG 58.282 33.333 0.00 0.00 0.00 2.62
190 191 7.843490 TCGAGTGATACTTATTTTGGAAAGG 57.157 36.000 0.00 0.00 0.00 3.11
191 192 6.821665 TCGAGTGATACTTATTTTGGAAAGGG 59.178 38.462 0.00 0.00 0.00 3.95
192 193 6.038271 CGAGTGATACTTATTTTGGAAAGGGG 59.962 42.308 0.00 0.00 0.00 4.79
193 194 6.194967 AGTGATACTTATTTTGGAAAGGGGG 58.805 40.000 0.00 0.00 0.00 5.40
225 226 9.783256 GATAATAATTAGCAAAACCGTGAAAGT 57.217 29.630 0.00 0.00 0.00 2.66
227 228 8.880878 AATAATTAGCAAAACCGTGAAAGTTT 57.119 26.923 0.00 0.00 39.07 2.66
228 229 9.968870 AATAATTAGCAAAACCGTGAAAGTTTA 57.031 25.926 0.00 0.00 36.44 2.01
229 230 9.968870 ATAATTAGCAAAACCGTGAAAGTTTAA 57.031 25.926 0.00 0.00 36.44 1.52
230 231 8.705048 AATTAGCAAAACCGTGAAAGTTTAAA 57.295 26.923 0.00 0.00 36.44 1.52
231 232 8.705048 ATTAGCAAAACCGTGAAAGTTTAAAA 57.295 26.923 0.00 0.00 36.44 1.52
232 233 6.397831 AGCAAAACCGTGAAAGTTTAAAAC 57.602 33.333 0.00 0.00 36.44 2.43
233 234 5.349270 AGCAAAACCGTGAAAGTTTAAAACC 59.651 36.000 0.00 0.00 36.44 3.27
234 235 5.446206 GCAAAACCGTGAAAGTTTAAAACCC 60.446 40.000 0.00 0.00 36.44 4.11
235 236 5.664294 AAACCGTGAAAGTTTAAAACCCT 57.336 34.783 0.00 0.00 35.71 4.34
236 237 4.642445 ACCGTGAAAGTTTAAAACCCTG 57.358 40.909 0.00 0.00 0.00 4.45
237 238 3.181484 ACCGTGAAAGTTTAAAACCCTGC 60.181 43.478 0.00 0.00 0.00 4.85
238 239 3.067601 CCGTGAAAGTTTAAAACCCTGCT 59.932 43.478 0.00 0.00 0.00 4.24
239 240 4.276431 CCGTGAAAGTTTAAAACCCTGCTA 59.724 41.667 0.00 0.00 0.00 3.49
240 241 5.048294 CCGTGAAAGTTTAAAACCCTGCTAT 60.048 40.000 0.00 0.00 0.00 2.97
241 242 6.149807 CCGTGAAAGTTTAAAACCCTGCTATA 59.850 38.462 0.00 0.00 0.00 1.31
242 243 7.019418 CGTGAAAGTTTAAAACCCTGCTATAC 58.981 38.462 0.00 0.00 0.00 1.47
243 244 7.308109 CGTGAAAGTTTAAAACCCTGCTATACA 60.308 37.037 0.00 0.00 0.00 2.29
244 245 7.806487 GTGAAAGTTTAAAACCCTGCTATACAC 59.194 37.037 0.00 0.00 0.00 2.90
245 246 7.502895 TGAAAGTTTAAAACCCTGCTATACACA 59.497 33.333 0.00 0.00 0.00 3.72
246 247 6.812879 AGTTTAAAACCCTGCTATACACAC 57.187 37.500 0.00 0.00 0.00 3.82
247 248 5.410439 AGTTTAAAACCCTGCTATACACACG 59.590 40.000 0.00 0.00 0.00 4.49
248 249 3.688694 AAAACCCTGCTATACACACGA 57.311 42.857 0.00 0.00 0.00 4.35
249 250 2.667473 AACCCTGCTATACACACGAC 57.333 50.000 0.00 0.00 0.00 4.34
250 251 0.822164 ACCCTGCTATACACACGACC 59.178 55.000 0.00 0.00 0.00 4.79
251 252 0.821517 CCCTGCTATACACACGACCA 59.178 55.000 0.00 0.00 0.00 4.02
252 253 1.412710 CCCTGCTATACACACGACCAT 59.587 52.381 0.00 0.00 0.00 3.55
253 254 2.626266 CCCTGCTATACACACGACCATA 59.374 50.000 0.00 0.00 0.00 2.74
254 255 3.552273 CCCTGCTATACACACGACCATAC 60.552 52.174 0.00 0.00 0.00 2.39
255 256 3.552273 CCTGCTATACACACGACCATACC 60.552 52.174 0.00 0.00 0.00 2.73
256 257 2.363038 TGCTATACACACGACCATACCC 59.637 50.000 0.00 0.00 0.00 3.69
257 258 2.363038 GCTATACACACGACCATACCCA 59.637 50.000 0.00 0.00 0.00 4.51
258 259 2.973694 ATACACACGACCATACCCAC 57.026 50.000 0.00 0.00 0.00 4.61
259 260 1.630223 TACACACGACCATACCCACA 58.370 50.000 0.00 0.00 0.00 4.17
260 261 0.034337 ACACACGACCATACCCACAC 59.966 55.000 0.00 0.00 0.00 3.82
261 262 1.011968 CACACGACCATACCCACACG 61.012 60.000 0.00 0.00 0.00 4.49
262 263 1.180456 ACACGACCATACCCACACGA 61.180 55.000 0.00 0.00 0.00 4.35
263 264 0.174845 CACGACCATACCCACACGAT 59.825 55.000 0.00 0.00 0.00 3.73
264 265 0.899720 ACGACCATACCCACACGATT 59.100 50.000 0.00 0.00 0.00 3.34
265 266 1.286501 CGACCATACCCACACGATTG 58.713 55.000 0.00 0.00 0.00 2.67
266 267 1.134936 CGACCATACCCACACGATTGA 60.135 52.381 0.00 0.00 0.00 2.57
267 268 2.675603 CGACCATACCCACACGATTGAA 60.676 50.000 0.00 0.00 0.00 2.69
268 269 2.936498 GACCATACCCACACGATTGAAG 59.064 50.000 0.00 0.00 0.00 3.02
269 270 2.288666 CCATACCCACACGATTGAAGG 58.711 52.381 0.00 0.00 0.00 3.46
270 271 2.093181 CCATACCCACACGATTGAAGGA 60.093 50.000 0.00 0.00 0.00 3.36
271 272 3.433598 CCATACCCACACGATTGAAGGAT 60.434 47.826 0.00 0.00 0.00 3.24
272 273 2.113860 ACCCACACGATTGAAGGATG 57.886 50.000 0.00 0.00 0.00 3.51
273 274 1.628340 ACCCACACGATTGAAGGATGA 59.372 47.619 0.00 0.00 0.00 2.92
274 275 2.239654 ACCCACACGATTGAAGGATGAT 59.760 45.455 0.00 0.00 0.00 2.45
275 276 2.615447 CCCACACGATTGAAGGATGATG 59.385 50.000 0.00 0.00 0.00 3.07
276 277 2.032550 CCACACGATTGAAGGATGATGC 59.967 50.000 0.00 0.00 0.00 3.91
277 278 2.679336 CACACGATTGAAGGATGATGCA 59.321 45.455 0.00 0.00 0.00 3.96
278 279 2.941064 ACACGATTGAAGGATGATGCAG 59.059 45.455 0.00 0.00 0.00 4.41
279 280 3.200483 CACGATTGAAGGATGATGCAGA 58.800 45.455 0.00 0.00 0.00 4.26
280 281 3.624410 CACGATTGAAGGATGATGCAGAA 59.376 43.478 0.00 0.00 0.00 3.02
281 282 3.875727 ACGATTGAAGGATGATGCAGAAG 59.124 43.478 0.00 0.00 0.00 2.85
282 283 4.124970 CGATTGAAGGATGATGCAGAAGA 58.875 43.478 0.00 0.00 0.00 2.87
283 284 4.755629 CGATTGAAGGATGATGCAGAAGAT 59.244 41.667 0.00 0.00 0.00 2.40
284 285 5.107026 CGATTGAAGGATGATGCAGAAGATC 60.107 44.000 0.00 0.00 0.00 2.75
285 286 4.765813 TGAAGGATGATGCAGAAGATCA 57.234 40.909 0.00 0.00 34.37 2.92
286 287 4.449131 TGAAGGATGATGCAGAAGATCAC 58.551 43.478 0.00 0.00 32.68 3.06
287 288 4.080751 TGAAGGATGATGCAGAAGATCACA 60.081 41.667 0.00 0.00 32.68 3.58
288 289 3.806380 AGGATGATGCAGAAGATCACAC 58.194 45.455 0.00 0.00 32.68 3.82
289 290 2.877168 GGATGATGCAGAAGATCACACC 59.123 50.000 0.00 0.00 32.68 4.16
290 291 3.538591 GATGATGCAGAAGATCACACCA 58.461 45.455 0.00 0.00 32.68 4.17
291 292 3.639672 TGATGCAGAAGATCACACCAT 57.360 42.857 0.00 0.00 0.00 3.55
292 293 3.538591 TGATGCAGAAGATCACACCATC 58.461 45.455 0.00 5.87 0.00 3.51
293 294 2.408271 TGCAGAAGATCACACCATCC 57.592 50.000 0.00 0.00 0.00 3.51
294 295 1.629861 TGCAGAAGATCACACCATCCA 59.370 47.619 0.00 0.00 0.00 3.41
295 296 2.040145 TGCAGAAGATCACACCATCCAA 59.960 45.455 0.00 0.00 0.00 3.53
296 297 3.285484 GCAGAAGATCACACCATCCAAT 58.715 45.455 0.00 0.00 0.00 3.16
297 298 3.066342 GCAGAAGATCACACCATCCAATG 59.934 47.826 0.00 0.00 0.00 2.82
298 299 3.066342 CAGAAGATCACACCATCCAATGC 59.934 47.826 0.00 0.00 0.00 3.56
299 300 2.812836 AGATCACACCATCCAATGCA 57.187 45.000 0.00 0.00 0.00 3.96
300 301 2.372264 AGATCACACCATCCAATGCAC 58.628 47.619 0.00 0.00 0.00 4.57
301 302 2.093890 GATCACACCATCCAATGCACA 58.906 47.619 0.00 0.00 0.00 4.57
302 303 1.536940 TCACACCATCCAATGCACAG 58.463 50.000 0.00 0.00 0.00 3.66
303 304 0.108992 CACACCATCCAATGCACAGC 60.109 55.000 0.00 0.00 0.00 4.40
304 305 0.540133 ACACCATCCAATGCACAGCA 60.540 50.000 0.00 0.00 44.86 4.41
305 306 0.172578 CACCATCCAATGCACAGCAG 59.827 55.000 0.00 0.00 43.65 4.24
306 307 1.141019 CCATCCAATGCACAGCAGC 59.859 57.895 0.00 0.00 43.65 5.25
323 324 4.063967 CAGCGCTGGTCCACCGTA 62.064 66.667 29.88 0.00 39.43 4.02
324 325 3.760035 AGCGCTGGTCCACCGTAG 61.760 66.667 10.39 0.00 39.43 3.51
339 340 3.841642 GTAGGATACGAGTGTCGGC 57.158 57.895 0.86 0.00 45.59 5.54
340 341 1.307097 GTAGGATACGAGTGTCGGCT 58.693 55.000 0.86 0.00 45.59 5.52
341 342 1.002684 GTAGGATACGAGTGTCGGCTG 60.003 57.143 0.86 0.00 45.59 4.85
342 343 0.680280 AGGATACGAGTGTCGGCTGT 60.680 55.000 0.86 0.00 45.59 4.40
343 344 1.019673 GGATACGAGTGTCGGCTGTA 58.980 55.000 0.86 0.00 45.59 2.74
344 345 1.607628 GGATACGAGTGTCGGCTGTAT 59.392 52.381 0.86 0.00 45.59 2.29
345 346 2.604855 GGATACGAGTGTCGGCTGTATG 60.605 54.545 0.86 0.00 45.59 2.39
346 347 1.456296 TACGAGTGTCGGCTGTATGT 58.544 50.000 0.86 0.00 45.59 2.29
347 348 0.170561 ACGAGTGTCGGCTGTATGTC 59.829 55.000 0.86 0.00 45.59 3.06
348 349 0.861866 CGAGTGTCGGCTGTATGTCG 60.862 60.000 0.00 0.00 46.47 4.35
349 350 0.170561 GAGTGTCGGCTGTATGTCGT 59.829 55.000 0.00 0.00 45.15 4.34
350 351 0.170561 AGTGTCGGCTGTATGTCGTC 59.829 55.000 0.00 0.00 45.15 4.20
351 352 0.170561 GTGTCGGCTGTATGTCGTCT 59.829 55.000 0.00 0.00 45.15 4.18
352 353 0.450583 TGTCGGCTGTATGTCGTCTC 59.549 55.000 0.00 0.00 45.15 3.36
353 354 0.733729 GTCGGCTGTATGTCGTCTCT 59.266 55.000 0.00 0.00 45.15 3.10
354 355 1.938577 GTCGGCTGTATGTCGTCTCTA 59.061 52.381 0.00 0.00 45.15 2.43
355 356 2.353889 GTCGGCTGTATGTCGTCTCTAA 59.646 50.000 0.00 0.00 45.15 2.10
356 357 3.011818 TCGGCTGTATGTCGTCTCTAAA 58.988 45.455 0.00 0.00 45.15 1.85
357 358 3.064958 TCGGCTGTATGTCGTCTCTAAAG 59.935 47.826 0.00 0.00 45.15 1.85
358 359 3.181499 CGGCTGTATGTCGTCTCTAAAGT 60.181 47.826 0.00 0.00 39.21 2.66
359 360 4.034858 CGGCTGTATGTCGTCTCTAAAGTA 59.965 45.833 0.00 0.00 39.21 2.24
360 361 5.277876 CGGCTGTATGTCGTCTCTAAAGTAT 60.278 44.000 0.00 0.00 39.21 2.12
361 362 6.144175 GGCTGTATGTCGTCTCTAAAGTATC 58.856 44.000 0.00 0.00 0.00 2.24
362 363 5.846994 GCTGTATGTCGTCTCTAAAGTATCG 59.153 44.000 0.00 0.00 0.00 2.92
363 364 6.511444 GCTGTATGTCGTCTCTAAAGTATCGT 60.511 42.308 0.00 0.00 0.00 3.73
364 365 6.941802 TGTATGTCGTCTCTAAAGTATCGTC 58.058 40.000 0.00 0.00 0.00 4.20
365 366 6.760298 TGTATGTCGTCTCTAAAGTATCGTCT 59.240 38.462 0.00 0.00 0.00 4.18
366 367 7.922811 TGTATGTCGTCTCTAAAGTATCGTCTA 59.077 37.037 0.00 0.00 0.00 2.59
367 368 6.580963 TGTCGTCTCTAAAGTATCGTCTAC 57.419 41.667 0.00 0.00 0.00 2.59
368 369 6.101997 TGTCGTCTCTAAAGTATCGTCTACA 58.898 40.000 1.81 0.00 0.00 2.74
369 370 6.035435 TGTCGTCTCTAAAGTATCGTCTACAC 59.965 42.308 1.81 0.00 0.00 2.90
370 371 6.035435 GTCGTCTCTAAAGTATCGTCTACACA 59.965 42.308 1.81 0.00 0.00 3.72
371 372 6.255237 TCGTCTCTAAAGTATCGTCTACACAG 59.745 42.308 1.81 0.00 0.00 3.66
372 373 6.193761 GTCTCTAAAGTATCGTCTACACAGC 58.806 44.000 1.81 0.00 0.00 4.40
373 374 5.878669 TCTCTAAAGTATCGTCTACACAGCA 59.121 40.000 0.00 0.00 0.00 4.41
374 375 6.037281 TCTCTAAAGTATCGTCTACACAGCAG 59.963 42.308 0.00 0.00 0.00 4.24
375 376 2.853731 AGTATCGTCTACACAGCAGC 57.146 50.000 0.00 0.00 0.00 5.25
376 377 2.370349 AGTATCGTCTACACAGCAGCT 58.630 47.619 0.00 0.00 0.00 4.24
377 378 2.755655 AGTATCGTCTACACAGCAGCTT 59.244 45.455 0.00 0.00 0.00 3.74
378 379 2.751166 ATCGTCTACACAGCAGCTTT 57.249 45.000 0.00 0.00 0.00 3.51
379 380 1.783284 TCGTCTACACAGCAGCTTTG 58.217 50.000 7.03 7.03 0.00 2.77
414 415 5.672819 GCAAACTACAAAGCCTAATACACGG 60.673 44.000 0.00 0.00 0.00 4.94
586 1496 7.321153 TCTAAGGTGTCACTTTATACTCTTGC 58.679 38.462 7.90 0.00 32.02 4.01
686 1599 3.004734 ACAACTCCAATAACAAGTGCAGC 59.995 43.478 0.00 0.00 0.00 5.25
717 1630 0.035439 ACGCCATTCTTGTCCGGATT 60.035 50.000 7.81 0.00 0.00 3.01
735 1648 8.665685 GTCCGGATTAATTTCGCTTCAATATAT 58.334 33.333 7.81 0.00 0.00 0.86
749 1662 9.135843 CGCTTCAATATATTAATTCCTGTCGTA 57.864 33.333 0.00 0.00 0.00 3.43
1020 1937 3.149196 CATGGCTAACACAACCTTGTCT 58.851 45.455 0.00 0.00 39.91 3.41
1302 2252 4.227134 CAGATCGTGGAGGGCGGG 62.227 72.222 0.00 0.00 0.00 6.13
1344 2294 2.102553 GTGCGCTCCTACGAGGTC 59.897 66.667 9.73 0.00 36.53 3.85
1441 2392 2.234908 AGCTAGGCTCATTTCTGACGTT 59.765 45.455 0.00 0.00 30.62 3.99
1474 2438 0.581529 ATATGCATGCACGTACGCAC 59.418 50.000 25.37 8.27 46.56 5.34
1511 2475 3.118454 CACGTGTGGATGTCGGGC 61.118 66.667 7.58 0.00 0.00 6.13
1862 2826 3.305267 CCGAGAAGATCATCAAGCTCGAT 60.305 47.826 19.35 0.00 45.64 3.59
1984 2966 0.108756 GTCTGACGTTCCTAGGCACC 60.109 60.000 2.96 0.00 0.00 5.01
2003 2985 5.278315 GGCACCTTTTTAAGATCGTTCTGTT 60.278 40.000 0.00 0.00 30.72 3.16
2052 3036 9.814899 CTTGTTTCTCACATCTATCTATGACTT 57.185 33.333 0.00 0.00 34.43 3.01
2054 3038 9.591792 TGTTTCTCACATCTATCTATGACTTTG 57.408 33.333 0.00 0.00 0.00 2.77
2055 3039 9.593134 GTTTCTCACATCTATCTATGACTTTGT 57.407 33.333 0.00 0.00 0.00 2.83
2056 3040 9.591792 TTTCTCACATCTATCTATGACTTTGTG 57.408 33.333 0.00 0.00 35.67 3.33
2192 3186 3.139077 GGGAGCATAACCCTTGTATTCG 58.861 50.000 0.00 0.00 43.65 3.34
2196 3190 2.033151 GCATAACCCTTGTATTCGTCGC 60.033 50.000 0.00 0.00 0.00 5.19
2198 3192 4.613944 CATAACCCTTGTATTCGTCGCTA 58.386 43.478 0.00 0.00 0.00 4.26
2222 3219 9.624373 CTATACAACTTCCAGTCCTAACTACTA 57.376 37.037 0.00 0.00 33.25 1.82
2228 3324 7.337938 ACTTCCAGTCCTAACTACTACTACTC 58.662 42.308 0.00 0.00 33.25 2.59
2229 3325 5.911752 TCCAGTCCTAACTACTACTACTCG 58.088 45.833 0.00 0.00 33.25 4.18
2360 3457 2.610859 GGTTGGGGAGCTCCTGGA 60.611 66.667 31.36 14.75 35.95 3.86
2470 3567 9.366216 CAACGATAATTAATATGGATCGGAGAA 57.634 33.333 18.39 0.00 43.58 2.87
2593 3690 1.807165 CTCCGATGTGGTGCAGTCG 60.807 63.158 0.00 0.00 39.52 4.18
2611 3708 1.298157 CGATTTGCCAGCCAGACGAA 61.298 55.000 0.00 0.00 0.00 3.85
2612 3709 1.098050 GATTTGCCAGCCAGACGAAT 58.902 50.000 0.00 0.00 0.00 3.34
2760 3857 2.622942 TGCAACTAAAAGCAGGTGAAGG 59.377 45.455 0.00 0.00 35.06 3.46
2762 3859 3.222603 CAACTAAAAGCAGGTGAAGGGT 58.777 45.455 0.00 0.00 35.06 4.34
2764 3861 4.017177 ACTAAAAGCAGGTGAAGGGTAC 57.983 45.455 0.00 0.00 0.00 3.34
2817 3914 9.965902 ATGGAAGAAGAAGTTATAACAATCTGT 57.034 29.630 17.65 10.53 30.83 3.41
2818 3915 9.219603 TGGAAGAAGAAGTTATAACAATCTGTG 57.780 33.333 17.65 0.00 30.83 3.66
2823 3920 8.779354 AAGAAGTTATAACAATCTGTGAGACC 57.221 34.615 17.65 0.00 30.83 3.85
2828 3925 7.766278 AGTTATAACAATCTGTGAGACCATGAC 59.234 37.037 17.65 0.00 0.00 3.06
2840 3939 7.988737 TGTGAGACCATGACATTGATTATTTC 58.011 34.615 0.00 0.00 0.00 2.17
2843 3942 5.532406 AGACCATGACATTGATTATTTCCCG 59.468 40.000 0.00 0.00 0.00 5.14
2855 3954 7.475137 TGATTATTTCCCGTTTGGAGAAAAT 57.525 32.000 0.00 0.00 46.24 1.82
2858 3957 3.378911 TTCCCGTTTGGAGAAAATTGC 57.621 42.857 0.00 0.00 46.24 3.56
2859 3958 1.268352 TCCCGTTTGGAGAAAATTGCG 59.732 47.619 0.00 0.00 38.61 4.85
2862 3961 1.451651 CGTTTGGAGAAAATTGCGTGC 59.548 47.619 0.00 0.00 0.00 5.34
2881 3980 3.195698 GGCGACAGCGATGGGAAC 61.196 66.667 5.32 0.00 46.35 3.62
2882 3981 2.125512 GCGACAGCGATGGGAACT 60.126 61.111 5.32 0.00 40.82 3.01
2887 3986 1.464997 GACAGCGATGGGAACTGTTTC 59.535 52.381 5.32 0.00 44.40 2.78
2910 4009 1.623081 CCAACCGTCGGATGTTCGTG 61.623 60.000 20.51 0.00 0.00 4.35
2918 4017 1.082117 CGGATGTTCGTGGTAGTGCC 61.082 60.000 0.00 0.00 37.90 5.01
2919 4018 0.036765 GGATGTTCGTGGTAGTGCCA 60.037 55.000 0.00 0.00 46.95 4.92
3028 4150 3.175152 GTGTGTTTGCGTGTGATGAAAA 58.825 40.909 0.00 0.00 0.00 2.29
3029 4151 3.001168 GTGTGTTTGCGTGTGATGAAAAC 60.001 43.478 0.00 0.00 0.00 2.43
3030 4152 2.533942 GTGTTTGCGTGTGATGAAAACC 59.466 45.455 0.00 0.00 31.28 3.27
3047 4169 7.490962 TGAAAACCTCTGTGTATGTTGTAAG 57.509 36.000 0.00 0.00 0.00 2.34
3073 4195 2.627515 TGATCACTGCAATCCTAGCC 57.372 50.000 0.00 0.00 0.00 3.93
3083 4205 1.207089 CAATCCTAGCCGTGGAAGTCA 59.793 52.381 0.00 0.00 37.13 3.41
3087 4209 1.645034 CTAGCCGTGGAAGTCATGTG 58.355 55.000 0.00 0.00 0.00 3.21
3095 4217 0.179045 GGAAGTCATGTGGGGATCCG 60.179 60.000 5.45 0.00 35.24 4.18
3099 4221 0.463833 GTCATGTGGGGATCCGAACC 60.464 60.000 5.45 1.71 35.24 3.62
3105 4227 2.356780 GGGGATCCGAACCACGTCT 61.357 63.158 5.45 0.00 40.78 4.18
3107 4229 1.321074 GGGATCCGAACCACGTCTCT 61.321 60.000 5.45 0.00 40.78 3.10
3108 4230 0.100861 GGATCCGAACCACGTCTCTC 59.899 60.000 0.00 0.00 40.78 3.20
3109 4231 1.096416 GATCCGAACCACGTCTCTCT 58.904 55.000 0.00 0.00 40.78 3.10
3113 4235 2.486982 TCCGAACCACGTCTCTCTTAAG 59.513 50.000 0.00 0.00 40.78 1.85
3114 4236 2.228343 CCGAACCACGTCTCTCTTAAGT 59.772 50.000 1.63 0.00 40.78 2.24
3115 4237 3.305199 CCGAACCACGTCTCTCTTAAGTT 60.305 47.826 1.63 0.00 40.78 2.66
3117 4239 4.382160 CGAACCACGTCTCTCTTAAGTTTC 59.618 45.833 1.63 0.00 37.22 2.78
3118 4240 4.931661 ACCACGTCTCTCTTAAGTTTCA 57.068 40.909 1.63 0.00 0.00 2.69
3119 4241 4.872664 ACCACGTCTCTCTTAAGTTTCAG 58.127 43.478 1.63 0.00 0.00 3.02
3120 4242 3.675698 CCACGTCTCTCTTAAGTTTCAGC 59.324 47.826 1.63 0.00 0.00 4.26
3121 4243 4.299155 CACGTCTCTCTTAAGTTTCAGCA 58.701 43.478 1.63 0.00 0.00 4.41
3122 4244 4.149046 CACGTCTCTCTTAAGTTTCAGCAC 59.851 45.833 1.63 0.00 0.00 4.40
3123 4245 4.038162 ACGTCTCTCTTAAGTTTCAGCACT 59.962 41.667 1.63 0.00 0.00 4.40
3124 4246 5.241064 ACGTCTCTCTTAAGTTTCAGCACTA 59.759 40.000 1.63 0.00 0.00 2.74
3125 4247 6.071840 ACGTCTCTCTTAAGTTTCAGCACTAT 60.072 38.462 1.63 0.00 0.00 2.12
3126 4248 6.809196 CGTCTCTCTTAAGTTTCAGCACTATT 59.191 38.462 1.63 0.00 0.00 1.73
3127 4249 7.329717 CGTCTCTCTTAAGTTTCAGCACTATTT 59.670 37.037 1.63 0.00 0.00 1.40
3149 4273 2.525750 TTAGCAATTTTCAGCGCTCG 57.474 45.000 7.13 3.29 35.93 5.03
3150 4274 0.096976 TAGCAATTTTCAGCGCTCGC 59.903 50.000 7.13 6.09 42.33 5.03
3151 4275 1.442520 GCAATTTTCAGCGCTCGCA 60.443 52.632 7.13 0.00 44.88 5.10
3152 4276 1.400990 GCAATTTTCAGCGCTCGCAG 61.401 55.000 7.13 8.70 44.88 5.18
3153 4277 0.795735 CAATTTTCAGCGCTCGCAGG 60.796 55.000 7.13 8.19 44.88 4.85
3154 4278 1.237285 AATTTTCAGCGCTCGCAGGT 61.237 50.000 7.13 0.00 44.88 4.00
3155 4279 1.237285 ATTTTCAGCGCTCGCAGGTT 61.237 50.000 7.13 0.00 44.88 3.50
3156 4280 1.841663 TTTTCAGCGCTCGCAGGTTC 61.842 55.000 7.13 0.00 44.88 3.62
3157 4281 2.715532 TTTCAGCGCTCGCAGGTTCT 62.716 55.000 7.13 0.00 44.88 3.01
3158 4282 2.715532 TTCAGCGCTCGCAGGTTCTT 62.716 55.000 7.13 0.00 44.88 2.52
3159 4283 2.031163 AGCGCTCGCAGGTTCTTT 59.969 55.556 16.86 0.00 44.88 2.52
3353 4477 3.262420 CGTCAAATTCCTCCTTCATCGT 58.738 45.455 0.00 0.00 0.00 3.73
3414 4538 3.717294 GGCAGGGGTGACGGTGAT 61.717 66.667 0.00 0.00 0.00 3.06
3711 4901 4.459089 GCCGGCGAAGAAGAGGCT 62.459 66.667 12.58 0.00 44.06 4.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.099042 ACCCTATTCAATGTCTTAAGCGT 57.901 39.130 0.00 0.00 0.00 5.07
1 2 5.360591 AGACCCTATTCAATGTCTTAAGCG 58.639 41.667 0.00 0.00 34.53 4.68
2 3 7.769044 TGTTAGACCCTATTCAATGTCTTAAGC 59.231 37.037 0.00 0.00 38.85 3.09
3 4 9.099454 GTGTTAGACCCTATTCAATGTCTTAAG 57.901 37.037 0.00 0.00 38.85 1.85
4 5 7.762615 CGTGTTAGACCCTATTCAATGTCTTAA 59.237 37.037 0.00 0.00 38.85 1.85
5 6 7.123098 TCGTGTTAGACCCTATTCAATGTCTTA 59.877 37.037 0.00 0.00 38.85 2.10
6 7 6.070995 TCGTGTTAGACCCTATTCAATGTCTT 60.071 38.462 0.00 0.00 38.85 3.01
7 8 5.421056 TCGTGTTAGACCCTATTCAATGTCT 59.579 40.000 0.00 0.00 40.87 3.41
8 9 5.519206 GTCGTGTTAGACCCTATTCAATGTC 59.481 44.000 0.00 0.00 35.22 3.06
9 10 5.046878 TGTCGTGTTAGACCCTATTCAATGT 60.047 40.000 0.00 0.00 40.26 2.71
10 11 5.416083 TGTCGTGTTAGACCCTATTCAATG 58.584 41.667 0.00 0.00 40.26 2.82
11 12 5.661458 CTGTCGTGTTAGACCCTATTCAAT 58.339 41.667 0.00 0.00 40.26 2.57
12 13 4.619863 GCTGTCGTGTTAGACCCTATTCAA 60.620 45.833 0.00 0.00 40.26 2.69
13 14 3.119245 GCTGTCGTGTTAGACCCTATTCA 60.119 47.826 0.00 0.00 40.26 2.57
14 15 3.445857 GCTGTCGTGTTAGACCCTATTC 58.554 50.000 0.00 0.00 40.26 1.75
15 16 2.159282 CGCTGTCGTGTTAGACCCTATT 60.159 50.000 0.00 0.00 40.26 1.73
16 17 1.404391 CGCTGTCGTGTTAGACCCTAT 59.596 52.381 0.00 0.00 40.26 2.57
17 18 0.806868 CGCTGTCGTGTTAGACCCTA 59.193 55.000 0.00 0.00 40.26 3.53
18 19 0.892358 TCGCTGTCGTGTTAGACCCT 60.892 55.000 0.00 0.00 40.26 4.34
19 20 0.038892 TTCGCTGTCGTGTTAGACCC 60.039 55.000 0.00 0.00 40.26 4.46
20 21 1.337821 CTTCGCTGTCGTGTTAGACC 58.662 55.000 0.00 0.00 40.26 3.85
21 22 0.708918 GCTTCGCTGTCGTGTTAGAC 59.291 55.000 0.00 0.00 41.30 2.59
22 23 0.728129 CGCTTCGCTGTCGTGTTAGA 60.728 55.000 0.00 0.00 36.96 2.10
23 24 1.002250 ACGCTTCGCTGTCGTGTTAG 61.002 55.000 0.00 0.00 34.92 2.34
24 25 1.000233 GACGCTTCGCTGTCGTGTTA 61.000 55.000 0.00 0.00 36.50 2.41
25 26 2.279252 ACGCTTCGCTGTCGTGTT 60.279 55.556 0.00 0.00 34.92 3.32
26 27 2.729862 GACGCTTCGCTGTCGTGT 60.730 61.111 0.00 0.00 36.50 4.49
27 28 1.817217 TTTGACGCTTCGCTGTCGTG 61.817 55.000 0.00 0.00 35.86 4.35
28 29 1.149361 TTTTGACGCTTCGCTGTCGT 61.149 50.000 0.00 0.00 35.86 4.34
29 30 0.718220 GTTTTGACGCTTCGCTGTCG 60.718 55.000 0.00 0.00 35.86 4.35
30 31 0.718220 CGTTTTGACGCTTCGCTGTC 60.718 55.000 0.00 0.00 34.56 3.51
31 32 1.275657 CGTTTTGACGCTTCGCTGT 59.724 52.632 0.00 0.00 0.00 4.40
32 33 1.438710 CCGTTTTGACGCTTCGCTG 60.439 57.895 0.00 0.00 0.00 5.18
33 34 2.935955 CCGTTTTGACGCTTCGCT 59.064 55.556 0.00 0.00 0.00 4.93
34 35 2.780149 ATGCCGTTTTGACGCTTCGC 62.780 55.000 0.00 0.00 0.00 4.70
35 36 1.059657 CATGCCGTTTTGACGCTTCG 61.060 55.000 0.00 0.00 0.00 3.79
36 37 0.237235 TCATGCCGTTTTGACGCTTC 59.763 50.000 0.00 0.00 0.00 3.86
37 38 0.040425 GTCATGCCGTTTTGACGCTT 60.040 50.000 0.00 0.00 33.57 4.68
38 39 1.163420 TGTCATGCCGTTTTGACGCT 61.163 50.000 0.00 0.00 44.11 5.07
39 40 0.109781 ATGTCATGCCGTTTTGACGC 60.110 50.000 0.00 0.00 44.11 5.19
40 41 1.978097 CAATGTCATGCCGTTTTGACG 59.022 47.619 0.00 0.00 44.11 4.35
41 42 3.058293 TCTCAATGTCATGCCGTTTTGAC 60.058 43.478 0.00 0.00 42.05 3.18
42 43 3.058293 GTCTCAATGTCATGCCGTTTTGA 60.058 43.478 0.00 0.00 0.00 2.69
43 44 3.236816 GTCTCAATGTCATGCCGTTTTG 58.763 45.455 0.00 0.00 0.00 2.44
44 45 2.884012 TGTCTCAATGTCATGCCGTTTT 59.116 40.909 0.00 0.00 0.00 2.43
45 46 2.226437 GTGTCTCAATGTCATGCCGTTT 59.774 45.455 0.00 0.00 0.00 3.60
46 47 1.806542 GTGTCTCAATGTCATGCCGTT 59.193 47.619 0.00 0.00 0.00 4.44
47 48 1.442769 GTGTCTCAATGTCATGCCGT 58.557 50.000 0.00 0.00 0.00 5.68
48 49 0.729116 GGTGTCTCAATGTCATGCCG 59.271 55.000 0.00 0.00 0.00 5.69
49 50 1.741706 CTGGTGTCTCAATGTCATGCC 59.258 52.381 0.00 0.00 0.00 4.40
50 51 2.161012 CACTGGTGTCTCAATGTCATGC 59.839 50.000 0.00 0.00 0.00 4.06
51 52 3.187842 CACACTGGTGTCTCAATGTCATG 59.812 47.826 3.16 0.00 42.83 3.07
52 53 3.071457 TCACACTGGTGTCTCAATGTCAT 59.929 43.478 3.16 0.00 45.45 3.06
53 54 2.433970 TCACACTGGTGTCTCAATGTCA 59.566 45.455 3.16 0.00 45.45 3.58
54 55 2.802816 GTCACACTGGTGTCTCAATGTC 59.197 50.000 3.16 0.00 45.45 3.06
55 56 2.803133 CGTCACACTGGTGTCTCAATGT 60.803 50.000 3.16 0.00 45.45 2.71
56 57 1.794701 CGTCACACTGGTGTCTCAATG 59.205 52.381 3.16 0.00 45.45 2.82
57 58 1.412710 ACGTCACACTGGTGTCTCAAT 59.587 47.619 3.16 0.00 45.45 2.57
58 59 0.821517 ACGTCACACTGGTGTCTCAA 59.178 50.000 3.16 0.00 45.45 3.02
59 60 1.682740 TACGTCACACTGGTGTCTCA 58.317 50.000 3.16 0.00 45.45 3.27
60 61 2.596452 CATACGTCACACTGGTGTCTC 58.404 52.381 3.16 0.06 45.45 3.36
61 62 1.336887 GCATACGTCACACTGGTGTCT 60.337 52.381 3.16 0.00 45.45 3.41
62 63 1.068474 GCATACGTCACACTGGTGTC 58.932 55.000 3.16 0.00 45.45 3.67
63 64 0.666274 CGCATACGTCACACTGGTGT 60.666 55.000 0.00 0.01 45.45 4.16
64 65 1.955529 GCGCATACGTCACACTGGTG 61.956 60.000 0.30 0.00 42.47 4.17
65 66 1.736645 GCGCATACGTCACACTGGT 60.737 57.895 0.30 0.00 42.83 4.00
66 67 2.788176 CGCGCATACGTCACACTGG 61.788 63.158 8.75 0.00 42.83 4.00
67 68 1.341369 TTCGCGCATACGTCACACTG 61.341 55.000 8.75 0.00 42.83 3.66
68 69 1.081041 TTCGCGCATACGTCACACT 60.081 52.632 8.75 0.00 42.83 3.55
69 70 1.056750 GTTCGCGCATACGTCACAC 59.943 57.895 8.75 0.00 42.83 3.82
70 71 0.940047 TTGTTCGCGCATACGTCACA 60.940 50.000 8.75 0.00 42.83 3.58
71 72 0.162082 TTTGTTCGCGCATACGTCAC 59.838 50.000 8.75 0.00 42.83 3.67
72 73 0.859882 TTTTGTTCGCGCATACGTCA 59.140 45.000 8.75 0.00 42.83 4.35
73 74 1.635660 GTTTTTGTTCGCGCATACGTC 59.364 47.619 8.75 0.00 42.83 4.34
74 75 1.003759 TGTTTTTGTTCGCGCATACGT 60.004 42.857 8.75 0.00 42.83 3.57
75 76 1.664629 TGTTTTTGTTCGCGCATACG 58.335 45.000 8.75 0.00 44.07 3.06
76 77 3.484285 AGTTTGTTTTTGTTCGCGCATAC 59.516 39.130 8.75 4.90 0.00 2.39
77 78 3.696898 AGTTTGTTTTTGTTCGCGCATA 58.303 36.364 8.75 0.00 0.00 3.14
78 79 2.535331 AGTTTGTTTTTGTTCGCGCAT 58.465 38.095 8.75 0.00 0.00 4.73
79 80 1.983972 AGTTTGTTTTTGTTCGCGCA 58.016 40.000 8.75 0.00 0.00 6.09
80 81 3.362281 AAAGTTTGTTTTTGTTCGCGC 57.638 38.095 0.00 0.00 0.00 6.86
81 82 4.027448 GCAAAAAGTTTGTTTTTGTTCGCG 59.973 37.500 19.02 0.00 45.87 5.87
82 83 4.906437 TGCAAAAAGTTTGTTTTTGTTCGC 59.094 33.333 19.02 9.28 45.87 4.70
83 84 7.545897 AATGCAAAAAGTTTGTTTTTGTTCG 57.454 28.000 19.02 1.07 45.87 3.95
92 93 8.337532 GCTTCAAGATTAATGCAAAAAGTTTGT 58.662 29.630 0.00 0.00 0.00 2.83
93 94 7.799914 GGCTTCAAGATTAATGCAAAAAGTTTG 59.200 33.333 0.00 0.00 0.00 2.93
94 95 7.041167 GGGCTTCAAGATTAATGCAAAAAGTTT 60.041 33.333 0.00 0.00 0.00 2.66
95 96 6.427853 GGGCTTCAAGATTAATGCAAAAAGTT 59.572 34.615 0.00 0.00 0.00 2.66
96 97 5.934043 GGGCTTCAAGATTAATGCAAAAAGT 59.066 36.000 0.00 0.00 0.00 2.66
97 98 6.091713 CAGGGCTTCAAGATTAATGCAAAAAG 59.908 38.462 0.00 0.00 0.00 2.27
98 99 5.933463 CAGGGCTTCAAGATTAATGCAAAAA 59.067 36.000 0.00 0.00 0.00 1.94
99 100 5.245751 TCAGGGCTTCAAGATTAATGCAAAA 59.754 36.000 0.00 0.00 0.00 2.44
100 101 4.771577 TCAGGGCTTCAAGATTAATGCAAA 59.228 37.500 0.00 0.00 0.00 3.68
101 102 4.343231 TCAGGGCTTCAAGATTAATGCAA 58.657 39.130 0.00 0.00 0.00 4.08
102 103 3.966979 TCAGGGCTTCAAGATTAATGCA 58.033 40.909 0.00 0.00 0.00 3.96
103 104 5.163478 ACAATCAGGGCTTCAAGATTAATGC 60.163 40.000 0.00 0.00 0.00 3.56
104 105 6.127535 ACACAATCAGGGCTTCAAGATTAATG 60.128 38.462 0.00 0.00 0.00 1.90
105 106 5.954150 ACACAATCAGGGCTTCAAGATTAAT 59.046 36.000 0.00 0.00 0.00 1.40
106 107 5.183713 CACACAATCAGGGCTTCAAGATTAA 59.816 40.000 0.00 0.00 0.00 1.40
107 108 4.701651 CACACAATCAGGGCTTCAAGATTA 59.298 41.667 0.00 0.00 0.00 1.75
108 109 3.508793 CACACAATCAGGGCTTCAAGATT 59.491 43.478 0.00 0.00 0.00 2.40
109 110 3.087031 CACACAATCAGGGCTTCAAGAT 58.913 45.455 0.00 0.00 0.00 2.40
110 111 2.507484 CACACAATCAGGGCTTCAAGA 58.493 47.619 0.00 0.00 0.00 3.02
111 112 1.542915 CCACACAATCAGGGCTTCAAG 59.457 52.381 0.00 0.00 0.00 3.02
112 113 1.133513 ACCACACAATCAGGGCTTCAA 60.134 47.619 0.00 0.00 0.00 2.69
113 114 0.478072 ACCACACAATCAGGGCTTCA 59.522 50.000 0.00 0.00 0.00 3.02
114 115 0.883833 CACCACACAATCAGGGCTTC 59.116 55.000 0.00 0.00 0.00 3.86
115 116 0.540365 CCACCACACAATCAGGGCTT 60.540 55.000 0.00 0.00 0.00 4.35
116 117 1.075482 CCACCACACAATCAGGGCT 59.925 57.895 0.00 0.00 0.00 5.19
117 118 0.323725 ATCCACCACACAATCAGGGC 60.324 55.000 0.00 0.00 0.00 5.19
118 119 3.364460 TTATCCACCACACAATCAGGG 57.636 47.619 0.00 0.00 0.00 4.45
119 120 5.920193 AATTTATCCACCACACAATCAGG 57.080 39.130 0.00 0.00 0.00 3.86
120 121 7.630242 ACTAATTTATCCACCACACAATCAG 57.370 36.000 0.00 0.00 0.00 2.90
121 122 7.450014 ACAACTAATTTATCCACCACACAATCA 59.550 33.333 0.00 0.00 0.00 2.57
122 123 7.754924 CACAACTAATTTATCCACCACACAATC 59.245 37.037 0.00 0.00 0.00 2.67
123 124 7.450014 TCACAACTAATTTATCCACCACACAAT 59.550 33.333 0.00 0.00 0.00 2.71
124 125 6.773200 TCACAACTAATTTATCCACCACACAA 59.227 34.615 0.00 0.00 0.00 3.33
125 126 6.205853 GTCACAACTAATTTATCCACCACACA 59.794 38.462 0.00 0.00 0.00 3.72
126 127 6.205853 TGTCACAACTAATTTATCCACCACAC 59.794 38.462 0.00 0.00 0.00 3.82
127 128 6.299922 TGTCACAACTAATTTATCCACCACA 58.700 36.000 0.00 0.00 0.00 4.17
128 129 6.811253 TGTCACAACTAATTTATCCACCAC 57.189 37.500 0.00 0.00 0.00 4.16
137 138 8.993424 AGAGGGAGTATATGTCACAACTAATTT 58.007 33.333 0.00 0.00 0.00 1.82
138 139 8.424918 CAGAGGGAGTATATGTCACAACTAATT 58.575 37.037 0.00 0.00 0.00 1.40
139 140 7.565398 ACAGAGGGAGTATATGTCACAACTAAT 59.435 37.037 0.00 0.00 0.00 1.73
140 141 6.895756 ACAGAGGGAGTATATGTCACAACTAA 59.104 38.462 0.00 0.00 0.00 2.24
141 142 6.432581 ACAGAGGGAGTATATGTCACAACTA 58.567 40.000 0.00 0.00 0.00 2.24
142 143 5.273208 ACAGAGGGAGTATATGTCACAACT 58.727 41.667 0.00 0.00 0.00 3.16
143 144 5.599999 ACAGAGGGAGTATATGTCACAAC 57.400 43.478 0.00 0.00 0.00 3.32
144 145 5.163550 CGAACAGAGGGAGTATATGTCACAA 60.164 44.000 0.00 0.00 0.00 3.33
145 146 4.338400 CGAACAGAGGGAGTATATGTCACA 59.662 45.833 0.00 0.00 0.00 3.58
146 147 4.579340 TCGAACAGAGGGAGTATATGTCAC 59.421 45.833 0.00 0.00 0.00 3.67
147 148 4.788679 TCGAACAGAGGGAGTATATGTCA 58.211 43.478 0.00 0.00 0.00 3.58
148 149 5.365403 CTCGAACAGAGGGAGTATATGTC 57.635 47.826 0.00 0.00 43.20 3.06
161 162 7.608153 TCCAAAATAAGTATCACTCGAACAGA 58.392 34.615 0.00 0.00 0.00 3.41
162 163 7.827819 TCCAAAATAAGTATCACTCGAACAG 57.172 36.000 0.00 0.00 0.00 3.16
163 164 8.610248 TTTCCAAAATAAGTATCACTCGAACA 57.390 30.769 0.00 0.00 0.00 3.18
164 165 8.175716 CCTTTCCAAAATAAGTATCACTCGAAC 58.824 37.037 0.00 0.00 0.00 3.95
165 166 7.335924 CCCTTTCCAAAATAAGTATCACTCGAA 59.664 37.037 0.00 0.00 0.00 3.71
166 167 6.821665 CCCTTTCCAAAATAAGTATCACTCGA 59.178 38.462 0.00 0.00 0.00 4.04
167 168 6.038271 CCCCTTTCCAAAATAAGTATCACTCG 59.962 42.308 0.00 0.00 0.00 4.18
168 169 6.321435 CCCCCTTTCCAAAATAAGTATCACTC 59.679 42.308 0.00 0.00 0.00 3.51
169 170 6.194967 CCCCCTTTCCAAAATAAGTATCACT 58.805 40.000 0.00 0.00 0.00 3.41
170 171 6.465439 CCCCCTTTCCAAAATAAGTATCAC 57.535 41.667 0.00 0.00 0.00 3.06
199 200 9.783256 ACTTTCACGGTTTTGCTAATTATTATC 57.217 29.630 0.00 0.00 0.00 1.75
201 202 9.968870 AAACTTTCACGGTTTTGCTAATTATTA 57.031 25.926 0.00 0.00 33.76 0.98
202 203 8.880878 AAACTTTCACGGTTTTGCTAATTATT 57.119 26.923 0.00 0.00 33.76 1.40
203 204 9.968870 TTAAACTTTCACGGTTTTGCTAATTAT 57.031 25.926 0.00 0.00 37.88 1.28
204 205 9.798994 TTTAAACTTTCACGGTTTTGCTAATTA 57.201 25.926 0.00 0.00 37.88 1.40
205 206 8.705048 TTTAAACTTTCACGGTTTTGCTAATT 57.295 26.923 0.00 0.00 37.88 1.40
206 207 8.597227 GTTTTAAACTTTCACGGTTTTGCTAAT 58.403 29.630 0.00 0.00 37.88 1.73
207 208 7.063191 GGTTTTAAACTTTCACGGTTTTGCTAA 59.937 33.333 7.79 0.00 37.88 3.09
208 209 6.530887 GGTTTTAAACTTTCACGGTTTTGCTA 59.469 34.615 7.79 0.00 37.88 3.49
209 210 5.349270 GGTTTTAAACTTTCACGGTTTTGCT 59.651 36.000 7.79 0.00 37.88 3.91
210 211 5.446206 GGGTTTTAAACTTTCACGGTTTTGC 60.446 40.000 7.79 0.00 37.88 3.68
211 212 5.870433 AGGGTTTTAAACTTTCACGGTTTTG 59.130 36.000 7.79 0.00 37.88 2.44
212 213 5.870433 CAGGGTTTTAAACTTTCACGGTTTT 59.130 36.000 7.79 0.00 37.88 2.43
213 214 5.412640 CAGGGTTTTAAACTTTCACGGTTT 58.587 37.500 7.79 0.00 39.70 3.27
214 215 4.678574 GCAGGGTTTTAAACTTTCACGGTT 60.679 41.667 7.79 0.00 0.00 4.44
215 216 3.181484 GCAGGGTTTTAAACTTTCACGGT 60.181 43.478 7.79 0.00 0.00 4.83
216 217 3.067601 AGCAGGGTTTTAAACTTTCACGG 59.932 43.478 7.79 0.00 0.00 4.94
217 218 4.301637 AGCAGGGTTTTAAACTTTCACG 57.698 40.909 7.79 0.00 0.00 4.35
218 219 7.806487 GTGTATAGCAGGGTTTTAAACTTTCAC 59.194 37.037 7.79 2.45 0.00 3.18
219 220 7.502895 TGTGTATAGCAGGGTTTTAAACTTTCA 59.497 33.333 7.79 0.00 0.00 2.69
220 221 7.806487 GTGTGTATAGCAGGGTTTTAAACTTTC 59.194 37.037 7.79 0.00 0.00 2.62
221 222 7.520937 CGTGTGTATAGCAGGGTTTTAAACTTT 60.521 37.037 7.79 0.00 0.00 2.66
222 223 6.072893 CGTGTGTATAGCAGGGTTTTAAACTT 60.073 38.462 7.79 0.00 0.00 2.66
223 224 5.410439 CGTGTGTATAGCAGGGTTTTAAACT 59.590 40.000 7.79 0.00 0.00 2.66
224 225 5.409214 TCGTGTGTATAGCAGGGTTTTAAAC 59.591 40.000 0.00 0.00 0.00 2.01
225 226 5.409214 GTCGTGTGTATAGCAGGGTTTTAAA 59.591 40.000 0.00 0.00 0.00 1.52
226 227 4.931002 GTCGTGTGTATAGCAGGGTTTTAA 59.069 41.667 0.00 0.00 0.00 1.52
227 228 4.497300 GTCGTGTGTATAGCAGGGTTTTA 58.503 43.478 0.00 0.00 0.00 1.52
228 229 3.332034 GTCGTGTGTATAGCAGGGTTTT 58.668 45.455 0.00 0.00 0.00 2.43
229 230 2.354403 GGTCGTGTGTATAGCAGGGTTT 60.354 50.000 0.00 0.00 0.00 3.27
230 231 1.206371 GGTCGTGTGTATAGCAGGGTT 59.794 52.381 0.00 0.00 0.00 4.11
231 232 0.822164 GGTCGTGTGTATAGCAGGGT 59.178 55.000 0.00 0.00 0.00 4.34
232 233 0.821517 TGGTCGTGTGTATAGCAGGG 59.178 55.000 0.00 0.00 0.00 4.45
233 234 2.890808 ATGGTCGTGTGTATAGCAGG 57.109 50.000 0.00 0.00 0.00 4.85
234 235 3.552273 GGGTATGGTCGTGTGTATAGCAG 60.552 52.174 0.00 0.00 0.00 4.24
235 236 2.363038 GGGTATGGTCGTGTGTATAGCA 59.637 50.000 0.00 0.00 0.00 3.49
236 237 2.363038 TGGGTATGGTCGTGTGTATAGC 59.637 50.000 0.00 0.00 0.00 2.97
237 238 3.382227 TGTGGGTATGGTCGTGTGTATAG 59.618 47.826 0.00 0.00 0.00 1.31
238 239 3.130869 GTGTGGGTATGGTCGTGTGTATA 59.869 47.826 0.00 0.00 0.00 1.47
239 240 2.093869 GTGTGGGTATGGTCGTGTGTAT 60.094 50.000 0.00 0.00 0.00 2.29
240 241 1.273048 GTGTGGGTATGGTCGTGTGTA 59.727 52.381 0.00 0.00 0.00 2.90
241 242 0.034337 GTGTGGGTATGGTCGTGTGT 59.966 55.000 0.00 0.00 0.00 3.72
242 243 1.011968 CGTGTGGGTATGGTCGTGTG 61.012 60.000 0.00 0.00 0.00 3.82
243 244 1.180456 TCGTGTGGGTATGGTCGTGT 61.180 55.000 0.00 0.00 0.00 4.49
244 245 0.174845 ATCGTGTGGGTATGGTCGTG 59.825 55.000 0.00 0.00 0.00 4.35
245 246 0.899720 AATCGTGTGGGTATGGTCGT 59.100 50.000 0.00 0.00 0.00 4.34
246 247 1.134936 TCAATCGTGTGGGTATGGTCG 60.135 52.381 0.00 0.00 0.00 4.79
247 248 2.684001 TCAATCGTGTGGGTATGGTC 57.316 50.000 0.00 0.00 0.00 4.02
248 249 2.355716 CCTTCAATCGTGTGGGTATGGT 60.356 50.000 0.00 0.00 0.00 3.55
249 250 2.093181 TCCTTCAATCGTGTGGGTATGG 60.093 50.000 0.00 0.00 0.00 2.74
250 251 3.260475 TCCTTCAATCGTGTGGGTATG 57.740 47.619 0.00 0.00 0.00 2.39
251 252 3.454447 TCATCCTTCAATCGTGTGGGTAT 59.546 43.478 0.00 0.00 0.00 2.73
252 253 2.835156 TCATCCTTCAATCGTGTGGGTA 59.165 45.455 0.00 0.00 0.00 3.69
253 254 1.628340 TCATCCTTCAATCGTGTGGGT 59.372 47.619 0.00 0.00 0.00 4.51
254 255 2.401583 TCATCCTTCAATCGTGTGGG 57.598 50.000 0.00 0.00 0.00 4.61
255 256 2.032550 GCATCATCCTTCAATCGTGTGG 59.967 50.000 0.00 0.00 0.00 4.17
256 257 2.679336 TGCATCATCCTTCAATCGTGTG 59.321 45.455 0.00 0.00 0.00 3.82
257 258 2.941064 CTGCATCATCCTTCAATCGTGT 59.059 45.455 0.00 0.00 0.00 4.49
258 259 3.200483 TCTGCATCATCCTTCAATCGTG 58.800 45.455 0.00 0.00 0.00 4.35
259 260 3.548745 TCTGCATCATCCTTCAATCGT 57.451 42.857 0.00 0.00 0.00 3.73
260 261 4.124970 TCTTCTGCATCATCCTTCAATCG 58.875 43.478 0.00 0.00 0.00 3.34
261 262 5.763698 TGATCTTCTGCATCATCCTTCAATC 59.236 40.000 0.00 0.00 0.00 2.67
262 263 5.531659 GTGATCTTCTGCATCATCCTTCAAT 59.468 40.000 0.00 0.00 32.86 2.57
263 264 4.880120 GTGATCTTCTGCATCATCCTTCAA 59.120 41.667 0.00 0.00 32.86 2.69
264 265 4.080751 TGTGATCTTCTGCATCATCCTTCA 60.081 41.667 0.00 0.00 32.86 3.02
265 266 4.272991 GTGTGATCTTCTGCATCATCCTTC 59.727 45.833 0.00 0.00 32.86 3.46
266 267 4.197750 GTGTGATCTTCTGCATCATCCTT 58.802 43.478 0.00 0.00 32.86 3.36
267 268 3.433314 GGTGTGATCTTCTGCATCATCCT 60.433 47.826 0.00 0.00 32.86 3.24
268 269 2.877168 GGTGTGATCTTCTGCATCATCC 59.123 50.000 0.00 0.00 32.86 3.51
269 270 3.538591 TGGTGTGATCTTCTGCATCATC 58.461 45.455 0.00 0.00 32.86 2.92
270 271 3.639672 TGGTGTGATCTTCTGCATCAT 57.360 42.857 0.00 0.00 32.86 2.45
271 272 3.538591 GATGGTGTGATCTTCTGCATCA 58.461 45.455 0.00 0.00 0.00 3.07
272 273 2.877168 GGATGGTGTGATCTTCTGCATC 59.123 50.000 0.00 0.00 0.00 3.91
273 274 2.240414 TGGATGGTGTGATCTTCTGCAT 59.760 45.455 0.00 0.00 0.00 3.96
274 275 1.629861 TGGATGGTGTGATCTTCTGCA 59.370 47.619 0.00 0.00 0.00 4.41
275 276 2.408271 TGGATGGTGTGATCTTCTGC 57.592 50.000 0.00 0.00 0.00 4.26
276 277 3.066342 GCATTGGATGGTGTGATCTTCTG 59.934 47.826 0.00 0.00 0.00 3.02
277 278 3.285484 GCATTGGATGGTGTGATCTTCT 58.715 45.455 0.00 0.00 0.00 2.85
278 279 3.018856 TGCATTGGATGGTGTGATCTTC 58.981 45.455 0.00 0.00 0.00 2.87
279 280 2.756760 GTGCATTGGATGGTGTGATCTT 59.243 45.455 0.00 0.00 0.00 2.40
280 281 2.291089 TGTGCATTGGATGGTGTGATCT 60.291 45.455 0.00 0.00 0.00 2.75
281 282 2.093890 TGTGCATTGGATGGTGTGATC 58.906 47.619 0.00 0.00 0.00 2.92
282 283 2.097036 CTGTGCATTGGATGGTGTGAT 58.903 47.619 0.00 0.00 0.00 3.06
283 284 1.536940 CTGTGCATTGGATGGTGTGA 58.463 50.000 0.00 0.00 0.00 3.58
284 285 0.108992 GCTGTGCATTGGATGGTGTG 60.109 55.000 0.00 0.00 0.00 3.82
285 286 0.540133 TGCTGTGCATTGGATGGTGT 60.540 50.000 0.00 0.00 31.71 4.16
286 287 0.172578 CTGCTGTGCATTGGATGGTG 59.827 55.000 0.00 0.00 38.13 4.17
287 288 1.601419 GCTGCTGTGCATTGGATGGT 61.601 55.000 0.00 0.00 38.13 3.55
288 289 1.141019 GCTGCTGTGCATTGGATGG 59.859 57.895 0.00 0.00 38.13 3.51
289 290 0.179137 CTGCTGCTGTGCATTGGATG 60.179 55.000 0.00 0.00 42.48 3.51
290 291 1.945354 GCTGCTGCTGTGCATTGGAT 61.945 55.000 8.53 0.00 42.48 3.41
291 292 2.632544 GCTGCTGCTGTGCATTGGA 61.633 57.895 8.53 0.00 42.48 3.53
292 293 2.126071 GCTGCTGCTGTGCATTGG 60.126 61.111 8.53 0.00 42.48 3.16
293 294 2.504026 CGCTGCTGCTGTGCATTG 60.504 61.111 14.03 0.00 42.48 2.82
294 295 4.415332 GCGCTGCTGCTGTGCATT 62.415 61.111 31.28 0.00 42.48 3.56
310 311 0.388294 GTATCCTACGGTGGACCAGC 59.612 60.000 13.93 13.93 39.17 4.85
321 322 1.002684 CAGCCGACACTCGTATCCTAC 60.003 57.143 0.00 0.00 38.40 3.18
322 323 1.306148 CAGCCGACACTCGTATCCTA 58.694 55.000 0.00 0.00 38.40 2.94
323 324 0.680280 ACAGCCGACACTCGTATCCT 60.680 55.000 0.00 0.00 38.40 3.24
324 325 1.019673 TACAGCCGACACTCGTATCC 58.980 55.000 0.00 0.00 38.40 2.59
325 326 2.033049 ACATACAGCCGACACTCGTATC 59.967 50.000 0.00 0.00 38.40 2.24
326 327 2.022195 ACATACAGCCGACACTCGTAT 58.978 47.619 0.00 0.00 38.40 3.06
327 328 1.399440 GACATACAGCCGACACTCGTA 59.601 52.381 0.00 0.00 38.40 3.43
328 329 0.170561 GACATACAGCCGACACTCGT 59.829 55.000 0.00 0.00 38.40 4.18
329 330 0.861866 CGACATACAGCCGACACTCG 60.862 60.000 0.00 0.00 40.07 4.18
330 331 0.170561 ACGACATACAGCCGACACTC 59.829 55.000 0.00 0.00 0.00 3.51
331 332 0.170561 GACGACATACAGCCGACACT 59.829 55.000 0.00 0.00 0.00 3.55
332 333 0.170561 AGACGACATACAGCCGACAC 59.829 55.000 0.00 0.00 0.00 3.67
333 334 0.450583 GAGACGACATACAGCCGACA 59.549 55.000 0.00 0.00 0.00 4.35
334 335 0.733729 AGAGACGACATACAGCCGAC 59.266 55.000 0.00 0.00 0.00 4.79
335 336 2.320745 TAGAGACGACATACAGCCGA 57.679 50.000 0.00 0.00 0.00 5.54
336 337 3.181499 ACTTTAGAGACGACATACAGCCG 60.181 47.826 0.00 0.00 0.00 5.52
337 338 4.373348 ACTTTAGAGACGACATACAGCC 57.627 45.455 0.00 0.00 0.00 4.85
338 339 5.846994 CGATACTTTAGAGACGACATACAGC 59.153 44.000 0.00 0.00 0.00 4.40
339 340 6.946165 ACGATACTTTAGAGACGACATACAG 58.054 40.000 0.00 0.00 0.00 2.74
340 341 6.760298 AGACGATACTTTAGAGACGACATACA 59.240 38.462 0.00 0.00 0.00 2.29
341 342 7.176285 AGACGATACTTTAGAGACGACATAC 57.824 40.000 0.00 0.00 0.00 2.39
342 343 7.922811 TGTAGACGATACTTTAGAGACGACATA 59.077 37.037 0.00 0.00 0.00 2.29
343 344 6.760298 TGTAGACGATACTTTAGAGACGACAT 59.240 38.462 0.00 0.00 0.00 3.06
344 345 6.035435 GTGTAGACGATACTTTAGAGACGACA 59.965 42.308 0.00 0.00 0.00 4.35
345 346 6.035435 TGTGTAGACGATACTTTAGAGACGAC 59.965 42.308 0.00 0.00 0.00 4.34
346 347 6.101997 TGTGTAGACGATACTTTAGAGACGA 58.898 40.000 0.00 0.00 0.00 4.20
347 348 6.341880 TGTGTAGACGATACTTTAGAGACG 57.658 41.667 0.00 0.00 0.00 4.18
348 349 6.183360 TGCTGTGTAGACGATACTTTAGAGAC 60.183 42.308 0.00 0.00 0.00 3.36
349 350 5.878669 TGCTGTGTAGACGATACTTTAGAGA 59.121 40.000 0.00 0.00 0.00 3.10
350 351 6.120378 TGCTGTGTAGACGATACTTTAGAG 57.880 41.667 0.00 0.00 0.00 2.43
351 352 5.448768 GCTGCTGTGTAGACGATACTTTAGA 60.449 44.000 0.00 0.00 0.00 2.10
352 353 4.735822 GCTGCTGTGTAGACGATACTTTAG 59.264 45.833 0.00 0.00 0.00 1.85
353 354 4.398358 AGCTGCTGTGTAGACGATACTTTA 59.602 41.667 0.00 0.00 0.00 1.85
354 355 3.193691 AGCTGCTGTGTAGACGATACTTT 59.806 43.478 0.00 0.00 0.00 2.66
355 356 2.755655 AGCTGCTGTGTAGACGATACTT 59.244 45.455 0.00 0.00 0.00 2.24
356 357 2.370349 AGCTGCTGTGTAGACGATACT 58.630 47.619 0.00 0.00 0.00 2.12
357 358 2.853731 AGCTGCTGTGTAGACGATAC 57.146 50.000 0.00 0.00 0.00 2.24
358 359 3.511699 CAAAGCTGCTGTGTAGACGATA 58.488 45.455 11.76 0.00 0.00 2.92
359 360 2.341257 CAAAGCTGCTGTGTAGACGAT 58.659 47.619 11.76 0.00 0.00 3.73
360 361 1.605457 CCAAAGCTGCTGTGTAGACGA 60.605 52.381 18.07 0.00 0.00 4.20
361 362 0.792640 CCAAAGCTGCTGTGTAGACG 59.207 55.000 18.07 0.00 0.00 4.18
362 363 2.169832 TCCAAAGCTGCTGTGTAGAC 57.830 50.000 18.07 0.00 0.00 2.59
363 364 2.928801 TTCCAAAGCTGCTGTGTAGA 57.071 45.000 18.07 6.86 0.00 2.59
364 365 2.880890 ACTTTCCAAAGCTGCTGTGTAG 59.119 45.455 18.07 13.73 39.63 2.74
365 366 2.930950 ACTTTCCAAAGCTGCTGTGTA 58.069 42.857 18.07 0.00 39.63 2.90
366 367 1.767759 ACTTTCCAAAGCTGCTGTGT 58.232 45.000 18.07 0.00 39.63 3.72
367 368 2.877043 AACTTTCCAAAGCTGCTGTG 57.123 45.000 12.99 12.99 39.63 3.66
368 369 4.797275 GCATAAACTTTCCAAAGCTGCTGT 60.797 41.667 1.35 0.00 39.63 4.40
369 370 3.676646 GCATAAACTTTCCAAAGCTGCTG 59.323 43.478 1.35 0.00 39.63 4.41
370 371 3.321682 TGCATAAACTTTCCAAAGCTGCT 59.678 39.130 0.00 0.00 39.63 4.24
371 372 3.652274 TGCATAAACTTTCCAAAGCTGC 58.348 40.909 0.00 0.00 39.63 5.25
372 373 5.977731 GTTTGCATAAACTTTCCAAAGCTG 58.022 37.500 0.00 0.00 42.26 4.24
464 1370 5.887035 TCTAGAAAGTCCTACTAACTCTGCC 59.113 44.000 0.00 0.00 0.00 4.85
586 1496 2.493278 AGGTGCCTTGATTTTTCCATCG 59.507 45.455 0.00 0.00 0.00 3.84
663 1573 4.539870 CTGCACTTGTTATTGGAGTTGTG 58.460 43.478 0.00 0.00 0.00 3.33
674 1584 2.161855 CATTCCCTGCTGCACTTGTTA 58.838 47.619 0.00 0.00 0.00 2.41
686 1599 1.033746 AATGGCGTGCTCATTCCCTG 61.034 55.000 3.66 0.00 29.77 4.45
749 1662 2.073816 CAAACTCCGCATACTTCGGTT 58.926 47.619 1.22 0.00 46.49 4.44
943 1860 2.494059 CTTCCTTGTTCGTGTGATGGT 58.506 47.619 0.00 0.00 0.00 3.55
949 1866 3.771577 AATCTCCTTCCTTGTTCGTGT 57.228 42.857 0.00 0.00 0.00 4.49
1020 1937 2.381911 GAGTGGTAGATGGTACCCGAA 58.618 52.381 10.07 0.00 36.79 4.30
1305 2255 3.379445 ACCGTCTGCTGGTACCGG 61.379 66.667 17.09 17.09 44.06 5.28
1441 2392 3.574354 TGCATATGTTATGTGCCCTCA 57.426 42.857 4.29 0.00 45.45 3.86
1474 2438 0.445436 GTTCAATGCTGTCTCCTGCG 59.555 55.000 0.00 0.00 38.28 5.18
1655 2619 3.124921 CGCCGCATCCCGTTCTTT 61.125 61.111 0.00 0.00 34.38 2.52
1862 2826 2.280524 ACGTGCTTGGCGTTGCTA 60.281 55.556 0.00 0.00 39.79 3.49
2266 3362 7.776030 TGACTACAAATTTAGGGTCAAACTTGA 59.224 33.333 13.30 0.00 31.07 3.02
2360 3457 6.238648 AGTTGTCGTTCATTTTATTCCTCCT 58.761 36.000 0.00 0.00 0.00 3.69
2373 3470 2.937799 GGGTGTGTTTAGTTGTCGTTCA 59.062 45.455 0.00 0.00 0.00 3.18
2465 3562 9.668497 ATCAACAAACTAATTACTACCTTCTCC 57.332 33.333 0.00 0.00 0.00 3.71
2470 3567 8.092687 ACACGATCAACAAACTAATTACTACCT 58.907 33.333 0.00 0.00 0.00 3.08
2593 3690 1.098050 ATTCGTCTGGCTGGCAAATC 58.902 50.000 5.14 0.00 0.00 2.17
2698 3795 2.126618 CATTGCTGCAGTGCACCG 60.127 61.111 15.37 6.88 43.20 4.94
2707 3804 0.249996 ACTTTGTTGGCCATTGCTGC 60.250 50.000 6.09 0.00 37.74 5.25
2758 3855 3.297736 CCTAACAATCTCCTCGTACCCT 58.702 50.000 0.00 0.00 0.00 4.34
2760 3857 2.364647 CCCCTAACAATCTCCTCGTACC 59.635 54.545 0.00 0.00 0.00 3.34
2762 3859 2.037144 GCCCCTAACAATCTCCTCGTA 58.963 52.381 0.00 0.00 0.00 3.43
2764 3861 0.830648 TGCCCCTAACAATCTCCTCG 59.169 55.000 0.00 0.00 0.00 4.63
2816 3913 7.420800 GGAAATAATCAATGTCATGGTCTCAC 58.579 38.462 0.00 0.00 0.00 3.51
2817 3914 6.547141 GGGAAATAATCAATGTCATGGTCTCA 59.453 38.462 0.00 0.00 0.00 3.27
2818 3915 6.293626 CGGGAAATAATCAATGTCATGGTCTC 60.294 42.308 0.00 0.00 0.00 3.36
2823 3920 6.476380 CCAAACGGGAAATAATCAATGTCATG 59.524 38.462 0.00 0.00 40.01 3.07
2840 3939 1.000717 ACGCAATTTTCTCCAAACGGG 60.001 47.619 0.00 0.00 38.37 5.28
2843 3942 1.792367 GGCACGCAATTTTCTCCAAAC 59.208 47.619 0.00 0.00 0.00 2.93
2879 3978 2.353579 CGACGGTTGGAAAGAAACAGTT 59.646 45.455 0.00 0.00 36.32 3.16
2881 3980 1.263217 CCGACGGTTGGAAAGAAACAG 59.737 52.381 8.88 0.00 0.00 3.16
2882 3981 1.134461 TCCGACGGTTGGAAAGAAACA 60.134 47.619 14.86 0.00 30.98 2.83
2887 3986 1.463444 GAACATCCGACGGTTGGAAAG 59.537 52.381 24.81 17.43 39.39 2.62
2910 4009 2.027561 TCAACATGGTACTGGCACTACC 60.028 50.000 14.34 14.34 39.84 3.18
2918 4017 2.073816 GTCCGGTTCAACATGGTACTG 58.926 52.381 0.00 0.00 0.00 2.74
2919 4018 1.695242 TGTCCGGTTCAACATGGTACT 59.305 47.619 0.00 0.00 0.00 2.73
3028 4150 5.775701 AGAGACTTACAACATACACAGAGGT 59.224 40.000 0.00 0.00 0.00 3.85
3029 4151 6.274157 AGAGACTTACAACATACACAGAGG 57.726 41.667 0.00 0.00 0.00 3.69
3030 4152 8.678199 TCATAGAGACTTACAACATACACAGAG 58.322 37.037 0.00 0.00 0.00 3.35
3047 4169 5.212532 AGGATTGCAGTGATCATAGAGAC 57.787 43.478 0.00 0.00 0.00 3.36
3073 4195 0.253044 ATCCCCACATGACTTCCACG 59.747 55.000 0.00 0.00 0.00 4.94
3083 4205 1.607612 GTGGTTCGGATCCCCACAT 59.392 57.895 25.58 0.00 46.33 3.21
3087 4209 2.186125 GACGTGGTTCGGATCCCC 59.814 66.667 6.06 1.94 44.69 4.81
3095 4217 5.287226 TGAAACTTAAGAGAGACGTGGTTC 58.713 41.667 10.09 0.00 0.00 3.62
3099 4221 4.149046 GTGCTGAAACTTAAGAGAGACGTG 59.851 45.833 10.09 0.00 0.00 4.49
3127 4249 3.668191 CGAGCGCTGAAAATTGCTAAAAA 59.332 39.130 18.48 0.00 37.91 1.94
3131 4255 0.096976 GCGAGCGCTGAAAATTGCTA 59.903 50.000 18.48 0.00 37.91 3.49
3144 4268 1.130613 CGAAAAGAACCTGCGAGCG 59.869 57.895 0.00 0.00 0.00 5.03
3149 4273 1.947456 ACTTCACCGAAAAGAACCTGC 59.053 47.619 0.00 0.00 0.00 4.85
3150 4274 3.202906 TGACTTCACCGAAAAGAACCTG 58.797 45.455 0.00 0.00 0.00 4.00
3151 4275 3.553828 TGACTTCACCGAAAAGAACCT 57.446 42.857 0.00 0.00 0.00 3.50
3152 4276 3.375922 TGTTGACTTCACCGAAAAGAACC 59.624 43.478 0.00 0.00 0.00 3.62
3153 4277 4.340263 GTGTTGACTTCACCGAAAAGAAC 58.660 43.478 0.00 0.00 0.00 3.01
3154 4278 3.375922 GGTGTTGACTTCACCGAAAAGAA 59.624 43.478 0.00 0.00 44.34 2.52
3155 4279 2.940410 GGTGTTGACTTCACCGAAAAGA 59.060 45.455 0.00 0.00 44.34 2.52
3156 4280 3.334272 GGTGTTGACTTCACCGAAAAG 57.666 47.619 0.00 0.00 44.34 2.27
3353 4477 3.561120 GACCCCATGTGGTTCGCCA 62.561 63.158 0.00 0.00 46.87 5.69
3414 4538 1.176619 TGGCTTCGACGTCTTCCTCA 61.177 55.000 14.70 3.96 0.00 3.86
3737 4987 1.744741 GCCTCTCCAGCTGCTTCAC 60.745 63.158 8.66 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.