Multiple sequence alignment - TraesCS2D01G548700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G548700 chr2D 100.000 3674 0 0 1 3674 624321117 624324790 0.000000e+00 6785.0
1 TraesCS2D01G548700 chr2B 94.080 1875 96 7 717 2577 766240288 766242161 0.000000e+00 2833.0
2 TraesCS2D01G548700 chr2B 80.000 275 48 7 2579 2849 771036476 771036205 2.890000e-46 196.0
3 TraesCS2D01G548700 chr2A 93.643 1872 105 8 716 2578 755736565 755738431 0.000000e+00 2785.0
4 TraesCS2D01G548700 chr2A 85.782 211 30 0 2579 2789 12203908 12203698 1.330000e-54 224.0
5 TraesCS2D01G548700 chr2A 89.286 84 8 1 581 664 755736368 755736450 1.800000e-18 104.0
6 TraesCS2D01G548700 chr3B 82.197 1129 117 36 2582 3673 813888120 813889201 0.000000e+00 894.0
7 TraesCS2D01G548700 chr3B 79.048 105 19 3 222 325 130304459 130304357 6.580000e-08 69.4
8 TraesCS2D01G548700 chr3B 86.207 58 8 0 222 279 727249171 727249228 3.060000e-06 63.9
9 TraesCS2D01G548700 chr6A 82.194 629 95 6 2579 3192 33033430 33032804 3.250000e-145 525.0
10 TraesCS2D01G548700 chr5B 87.387 333 36 6 3342 3673 673099778 673100105 9.630000e-101 377.0
11 TraesCS2D01G548700 chr5B 86.339 183 17 8 3491 3673 44135254 44135428 3.740000e-45 193.0
12 TraesCS2D01G548700 chr5B 97.059 34 1 0 2290 2323 94049720 94049753 1.430000e-04 58.4
13 TraesCS2D01G548700 chr5D 83.508 382 46 11 2579 2946 455011738 455012116 1.260000e-89 340.0
14 TraesCS2D01G548700 chr5D 84.028 288 37 9 3390 3673 34041988 34041706 6.050000e-68 268.0
15 TraesCS2D01G548700 chr5D 78.008 241 47 6 3433 3673 91865581 91865815 2.960000e-31 147.0
16 TraesCS2D01G548700 chr5D 97.059 34 1 0 2290 2323 88466391 88466424 1.430000e-04 58.4
17 TraesCS2D01G548700 chr7B 82.927 328 43 10 3348 3673 744899738 744899422 2.160000e-72 283.0
18 TraesCS2D01G548700 chr7B 83.775 302 34 10 2679 2967 579412375 579412674 4.680000e-69 272.0
19 TraesCS2D01G548700 chr7B 81.633 245 44 1 2579 2822 376441078 376440834 6.220000e-48 202.0
20 TraesCS2D01G548700 chr7D 83.916 286 35 9 3389 3673 606945354 606945629 2.810000e-66 263.0
21 TraesCS2D01G548700 chr7D 76.720 189 42 2 225 411 174990451 174990263 1.800000e-18 104.0
22 TraesCS2D01G548700 chr5A 78.502 414 74 11 8 410 18781655 18782064 1.310000e-64 257.0
23 TraesCS2D01G548700 chr3D 85.294 238 34 1 2578 2814 541298289 541298052 1.020000e-60 244.0
24 TraesCS2D01G548700 chr7A 80.364 275 46 7 2579 2849 681989997 681989727 6.220000e-48 202.0
25 TraesCS2D01G548700 chr7A 79.253 241 44 6 3433 3673 10092795 10092561 2.940000e-36 163.0
26 TraesCS2D01G548700 chr3A 86.339 183 24 1 2577 2759 614659921 614660102 8.050000e-47 198.0
27 TraesCS2D01G548700 chr1B 81.624 234 40 3 2576 2807 686873192 686873424 1.350000e-44 191.0
28 TraesCS2D01G548700 chr1B 79.253 241 44 6 3433 3673 585940702 585940936 2.940000e-36 163.0
29 TraesCS2D01G548700 chr1B 82.353 85 13 2 222 305 9488386 9488303 5.090000e-09 73.1
30 TraesCS2D01G548700 chr1D 89.062 64 7 0 222 285 14265493 14265556 3.040000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G548700 chr2D 624321117 624324790 3673 False 6785.0 6785 100.0000 1 3674 1 chr2D.!!$F1 3673
1 TraesCS2D01G548700 chr2B 766240288 766242161 1873 False 2833.0 2833 94.0800 717 2577 1 chr2B.!!$F1 1860
2 TraesCS2D01G548700 chr2A 755736368 755738431 2063 False 1444.5 2785 91.4645 581 2578 2 chr2A.!!$F1 1997
3 TraesCS2D01G548700 chr3B 813888120 813889201 1081 False 894.0 894 82.1970 2582 3673 1 chr3B.!!$F2 1091
4 TraesCS2D01G548700 chr6A 33032804 33033430 626 True 525.0 525 82.1940 2579 3192 1 chr6A.!!$R1 613

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
553 554 0.032678 CTGACGTGCTCTTCCAGTGT 59.967 55.0 0.00 0.00 0.00 3.55 F
585 586 0.035317 AGAATGGTGCGCTGACTTGA 59.965 50.0 9.73 0.00 0.00 3.02 F
602 603 0.313672 TGAAGGTTTTCCGCATGCAC 59.686 50.0 19.57 7.57 46.35 4.57 F
1816 1896 0.389166 AGCAAGAAGAGAACGGAGCG 60.389 55.0 0.00 0.00 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1576 1656 0.179205 GTGAGCAGCGAGAACATTGC 60.179 55.0 0.00 0.0 38.78 3.56 R
1578 1658 0.319900 ACGTGAGCAGCGAGAACATT 60.320 50.0 0.00 0.0 0.00 2.71 R
2361 2444 0.683973 ACGGCATCATCCTGATCTCC 59.316 55.0 0.00 0.0 34.28 3.71 R
2790 2873 0.039472 CATTGACATGTGGGACCCCA 59.961 55.0 8.45 3.1 45.02 4.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 4.722700 CGGTGGGCCCTTCCTGTG 62.723 72.222 25.70 9.20 34.39 3.66
47 48 4.432741 GGGCCCTTCCTGTGCCTC 62.433 72.222 17.04 0.00 44.71 4.70
48 49 4.432741 GGCCCTTCCTGTGCCTCC 62.433 72.222 0.00 0.00 42.01 4.30
49 50 3.334054 GCCCTTCCTGTGCCTCCT 61.334 66.667 0.00 0.00 0.00 3.69
50 51 2.993853 CCCTTCCTGTGCCTCCTC 59.006 66.667 0.00 0.00 0.00 3.71
51 52 2.674220 CCCTTCCTGTGCCTCCTCC 61.674 68.421 0.00 0.00 0.00 4.30
52 53 2.674220 CCTTCCTGTGCCTCCTCCC 61.674 68.421 0.00 0.00 0.00 4.30
53 54 1.614824 CTTCCTGTGCCTCCTCCCT 60.615 63.158 0.00 0.00 0.00 4.20
54 55 1.151810 TTCCTGTGCCTCCTCCCTT 60.152 57.895 0.00 0.00 0.00 3.95
55 56 0.772124 TTCCTGTGCCTCCTCCCTTT 60.772 55.000 0.00 0.00 0.00 3.11
56 57 1.201429 TCCTGTGCCTCCTCCCTTTC 61.201 60.000 0.00 0.00 0.00 2.62
57 58 1.301293 CTGTGCCTCCTCCCTTTCC 59.699 63.158 0.00 0.00 0.00 3.13
58 59 1.151810 TGTGCCTCCTCCCTTTCCT 60.152 57.895 0.00 0.00 0.00 3.36
59 60 1.201429 TGTGCCTCCTCCCTTTCCTC 61.201 60.000 0.00 0.00 0.00 3.71
60 61 1.616628 TGCCTCCTCCCTTTCCTCC 60.617 63.158 0.00 0.00 0.00 4.30
61 62 2.379459 GCCTCCTCCCTTTCCTCCC 61.379 68.421 0.00 0.00 0.00 4.30
62 63 2.066999 CCTCCTCCCTTTCCTCCCG 61.067 68.421 0.00 0.00 0.00 5.14
63 64 1.001760 CTCCTCCCTTTCCTCCCGA 59.998 63.158 0.00 0.00 0.00 5.14
64 65 0.617820 CTCCTCCCTTTCCTCCCGAA 60.618 60.000 0.00 0.00 0.00 4.30
65 66 0.617820 TCCTCCCTTTCCTCCCGAAG 60.618 60.000 0.00 0.00 0.00 3.79
66 67 0.617820 CCTCCCTTTCCTCCCGAAGA 60.618 60.000 0.00 0.00 0.00 2.87
67 68 0.537653 CTCCCTTTCCTCCCGAAGAC 59.462 60.000 0.00 0.00 0.00 3.01
68 69 0.908180 TCCCTTTCCTCCCGAAGACC 60.908 60.000 0.00 0.00 0.00 3.85
69 70 1.198759 CCCTTTCCTCCCGAAGACCA 61.199 60.000 0.00 0.00 0.00 4.02
70 71 0.912486 CCTTTCCTCCCGAAGACCAT 59.088 55.000 0.00 0.00 0.00 3.55
71 72 1.134371 CCTTTCCTCCCGAAGACCATC 60.134 57.143 0.00 0.00 0.00 3.51
72 73 1.834263 CTTTCCTCCCGAAGACCATCT 59.166 52.381 0.00 0.00 0.00 2.90
73 74 1.486211 TTCCTCCCGAAGACCATCTC 58.514 55.000 0.00 0.00 0.00 2.75
74 75 0.397254 TCCTCCCGAAGACCATCTCC 60.397 60.000 0.00 0.00 0.00 3.71
75 76 1.736586 CTCCCGAAGACCATCTCCG 59.263 63.158 0.00 0.00 0.00 4.63
76 77 1.739338 CTCCCGAAGACCATCTCCGG 61.739 65.000 0.00 0.00 39.85 5.14
77 78 2.058595 CCCGAAGACCATCTCCGGT 61.059 63.158 0.00 0.00 43.91 5.28
83 84 4.963878 ACCATCTCCGGTCAATGC 57.036 55.556 0.00 0.00 32.11 3.56
84 85 1.153369 ACCATCTCCGGTCAATGCG 60.153 57.895 0.00 1.64 32.11 4.73
85 86 2.537560 CCATCTCCGGTCAATGCGC 61.538 63.158 0.00 0.00 0.00 6.09
86 87 2.203070 ATCTCCGGTCAATGCGCC 60.203 61.111 4.18 0.00 0.00 6.53
87 88 3.757248 ATCTCCGGTCAATGCGCCC 62.757 63.158 4.18 0.00 0.00 6.13
118 119 4.803426 CGCTCCGGACCAGCAGTC 62.803 72.222 13.90 0.00 45.51 3.51
127 128 2.032528 CCAGCAGTCGCAGGGAAA 59.967 61.111 0.00 0.00 41.02 3.13
128 129 2.328099 CCAGCAGTCGCAGGGAAAC 61.328 63.158 0.00 0.00 41.02 2.78
129 130 2.357517 AGCAGTCGCAGGGAAACG 60.358 61.111 0.00 0.00 42.27 3.60
130 131 2.357034 GCAGTCGCAGGGAAACGA 60.357 61.111 0.00 0.00 38.36 3.85
134 135 2.257371 TCGCAGGGAAACGACGAG 59.743 61.111 0.00 0.00 32.45 4.18
135 136 2.809601 CGCAGGGAAACGACGAGG 60.810 66.667 0.00 0.00 0.00 4.63
136 137 2.654877 GCAGGGAAACGACGAGGA 59.345 61.111 0.00 0.00 0.00 3.71
137 138 1.005394 GCAGGGAAACGACGAGGAA 60.005 57.895 0.00 0.00 0.00 3.36
138 139 1.014564 GCAGGGAAACGACGAGGAAG 61.015 60.000 0.00 0.00 0.00 3.46
139 140 0.601558 CAGGGAAACGACGAGGAAGA 59.398 55.000 0.00 0.00 0.00 2.87
140 141 1.000506 CAGGGAAACGACGAGGAAGAA 59.999 52.381 0.00 0.00 0.00 2.52
141 142 1.272769 AGGGAAACGACGAGGAAGAAG 59.727 52.381 0.00 0.00 0.00 2.85
142 143 1.271656 GGGAAACGACGAGGAAGAAGA 59.728 52.381 0.00 0.00 0.00 2.87
143 144 2.288640 GGGAAACGACGAGGAAGAAGAA 60.289 50.000 0.00 0.00 0.00 2.52
144 145 2.987821 GGAAACGACGAGGAAGAAGAAG 59.012 50.000 0.00 0.00 0.00 2.85
145 146 3.305199 GGAAACGACGAGGAAGAAGAAGA 60.305 47.826 0.00 0.00 0.00 2.87
146 147 4.487019 GAAACGACGAGGAAGAAGAAGAT 58.513 43.478 0.00 0.00 0.00 2.40
147 148 5.392811 GGAAACGACGAGGAAGAAGAAGATA 60.393 44.000 0.00 0.00 0.00 1.98
148 149 5.640189 AACGACGAGGAAGAAGAAGATAA 57.360 39.130 0.00 0.00 0.00 1.75
149 150 5.640189 ACGACGAGGAAGAAGAAGATAAA 57.360 39.130 0.00 0.00 0.00 1.40
150 151 6.022163 ACGACGAGGAAGAAGAAGATAAAA 57.978 37.500 0.00 0.00 0.00 1.52
151 152 6.453092 ACGACGAGGAAGAAGAAGATAAAAA 58.547 36.000 0.00 0.00 0.00 1.94
152 153 6.586844 ACGACGAGGAAGAAGAAGATAAAAAG 59.413 38.462 0.00 0.00 0.00 2.27
153 154 6.035112 CGACGAGGAAGAAGAAGATAAAAAGG 59.965 42.308 0.00 0.00 0.00 3.11
154 155 7.005709 ACGAGGAAGAAGAAGATAAAAAGGA 57.994 36.000 0.00 0.00 0.00 3.36
155 156 7.100409 ACGAGGAAGAAGAAGATAAAAAGGAG 58.900 38.462 0.00 0.00 0.00 3.69
156 157 7.038941 ACGAGGAAGAAGAAGATAAAAAGGAGA 60.039 37.037 0.00 0.00 0.00 3.71
157 158 7.819900 CGAGGAAGAAGAAGATAAAAAGGAGAA 59.180 37.037 0.00 0.00 0.00 2.87
158 159 9.508642 GAGGAAGAAGAAGATAAAAAGGAGAAA 57.491 33.333 0.00 0.00 0.00 2.52
159 160 9.513906 AGGAAGAAGAAGATAAAAAGGAGAAAG 57.486 33.333 0.00 0.00 0.00 2.62
160 161 9.508642 GGAAGAAGAAGATAAAAAGGAGAAAGA 57.491 33.333 0.00 0.00 0.00 2.52
162 163 9.853177 AAGAAGAAGATAAAAAGGAGAAAGACA 57.147 29.630 0.00 0.00 0.00 3.41
163 164 9.853177 AGAAGAAGATAAAAAGGAGAAAGACAA 57.147 29.630 0.00 0.00 0.00 3.18
165 166 8.628630 AGAAGATAAAAAGGAGAAAGACAAGG 57.371 34.615 0.00 0.00 0.00 3.61
166 167 8.440771 AGAAGATAAAAAGGAGAAAGACAAGGA 58.559 33.333 0.00 0.00 0.00 3.36
167 168 8.628630 AAGATAAAAAGGAGAAAGACAAGGAG 57.371 34.615 0.00 0.00 0.00 3.69
168 169 6.657117 AGATAAAAAGGAGAAAGACAAGGAGC 59.343 38.462 0.00 0.00 0.00 4.70
169 170 2.464157 AAGGAGAAAGACAAGGAGCG 57.536 50.000 0.00 0.00 0.00 5.03
170 171 1.633774 AGGAGAAAGACAAGGAGCGA 58.366 50.000 0.00 0.00 0.00 4.93
171 172 1.273886 AGGAGAAAGACAAGGAGCGAC 59.726 52.381 0.00 0.00 0.00 5.19
172 173 1.273886 GGAGAAAGACAAGGAGCGACT 59.726 52.381 0.00 0.00 0.00 4.18
173 174 2.333014 GAGAAAGACAAGGAGCGACTG 58.667 52.381 0.00 0.00 0.00 3.51
174 175 1.964223 AGAAAGACAAGGAGCGACTGA 59.036 47.619 0.00 0.00 0.00 3.41
175 176 2.062519 GAAAGACAAGGAGCGACTGAC 58.937 52.381 0.00 0.00 0.00 3.51
176 177 1.333177 AAGACAAGGAGCGACTGACT 58.667 50.000 0.00 0.00 0.00 3.41
177 178 0.600557 AGACAAGGAGCGACTGACTG 59.399 55.000 0.00 0.00 0.00 3.51
178 179 0.389166 GACAAGGAGCGACTGACTGG 60.389 60.000 0.00 0.00 0.00 4.00
179 180 1.115930 ACAAGGAGCGACTGACTGGT 61.116 55.000 0.00 0.00 0.00 4.00
180 181 0.668706 CAAGGAGCGACTGACTGGTG 60.669 60.000 0.00 0.00 0.00 4.17
181 182 1.821061 AAGGAGCGACTGACTGGTGG 61.821 60.000 0.00 0.00 0.00 4.61
182 183 2.262915 GAGCGACTGACTGGTGGG 59.737 66.667 0.00 0.00 0.00 4.61
183 184 2.524394 AGCGACTGACTGGTGGGT 60.524 61.111 0.00 0.00 0.00 4.51
184 185 2.048127 GCGACTGACTGGTGGGTC 60.048 66.667 0.00 0.00 36.81 4.46
185 186 2.657237 CGACTGACTGGTGGGTCC 59.343 66.667 0.00 0.00 35.54 4.46
186 187 2.943978 CGACTGACTGGTGGGTCCC 61.944 68.421 0.00 0.00 35.54 4.46
187 188 2.529389 ACTGACTGGTGGGTCCCC 60.529 66.667 5.13 0.00 35.54 4.81
188 189 3.330720 CTGACTGGTGGGTCCCCC 61.331 72.222 5.13 6.97 45.71 5.40
197 198 3.097162 GGGTCCCCCATCCACCTC 61.097 72.222 0.00 0.00 44.65 3.85
198 199 2.286121 GGTCCCCCATCCACCTCA 60.286 66.667 0.00 0.00 0.00 3.86
199 200 2.378634 GGTCCCCCATCCACCTCAG 61.379 68.421 0.00 0.00 0.00 3.35
200 201 2.692368 TCCCCCATCCACCTCAGC 60.692 66.667 0.00 0.00 0.00 4.26
201 202 2.693864 CCCCCATCCACCTCAGCT 60.694 66.667 0.00 0.00 0.00 4.24
202 203 2.750657 CCCCCATCCACCTCAGCTC 61.751 68.421 0.00 0.00 0.00 4.09
203 204 2.503061 CCCATCCACCTCAGCTCG 59.497 66.667 0.00 0.00 0.00 5.03
204 205 2.362369 CCCATCCACCTCAGCTCGT 61.362 63.158 0.00 0.00 0.00 4.18
205 206 1.142748 CCATCCACCTCAGCTCGTC 59.857 63.158 0.00 0.00 0.00 4.20
206 207 1.607801 CCATCCACCTCAGCTCGTCA 61.608 60.000 0.00 0.00 0.00 4.35
207 208 0.247460 CATCCACCTCAGCTCGTCAA 59.753 55.000 0.00 0.00 0.00 3.18
208 209 0.534412 ATCCACCTCAGCTCGTCAAG 59.466 55.000 0.00 0.00 0.00 3.02
209 210 0.827925 TCCACCTCAGCTCGTCAAGT 60.828 55.000 0.00 0.00 0.00 3.16
210 211 0.888619 CCACCTCAGCTCGTCAAGTA 59.111 55.000 0.00 0.00 0.00 2.24
211 212 1.135257 CCACCTCAGCTCGTCAAGTAG 60.135 57.143 0.00 0.00 0.00 2.57
212 213 1.542030 CACCTCAGCTCGTCAAGTAGT 59.458 52.381 0.00 0.00 0.00 2.73
213 214 1.542030 ACCTCAGCTCGTCAAGTAGTG 59.458 52.381 0.00 0.00 0.00 2.74
214 215 1.813178 CCTCAGCTCGTCAAGTAGTGA 59.187 52.381 0.00 0.00 0.00 3.41
230 231 6.197364 AGTAGTGACTTGGATTAGTCTTCG 57.803 41.667 0.00 0.00 43.92 3.79
231 232 3.851098 AGTGACTTGGATTAGTCTTCGC 58.149 45.455 0.00 0.00 43.92 4.70
232 233 2.930682 GTGACTTGGATTAGTCTTCGCC 59.069 50.000 0.00 0.00 43.92 5.54
233 234 2.565391 TGACTTGGATTAGTCTTCGCCA 59.435 45.455 0.00 0.00 43.92 5.69
234 235 2.930682 GACTTGGATTAGTCTTCGCCAC 59.069 50.000 0.00 0.00 41.07 5.01
235 236 1.927174 CTTGGATTAGTCTTCGCCACG 59.073 52.381 0.00 0.00 0.00 4.94
236 237 0.892755 TGGATTAGTCTTCGCCACGT 59.107 50.000 0.00 0.00 0.00 4.49
237 238 1.135199 TGGATTAGTCTTCGCCACGTC 60.135 52.381 0.00 0.00 0.00 4.34
238 239 1.135199 GGATTAGTCTTCGCCACGTCA 60.135 52.381 0.00 0.00 0.00 4.35
239 240 2.186076 GATTAGTCTTCGCCACGTCAG 58.814 52.381 0.00 0.00 0.00 3.51
240 241 0.388134 TTAGTCTTCGCCACGTCAGC 60.388 55.000 0.00 0.00 0.00 4.26
241 242 2.209064 TAGTCTTCGCCACGTCAGCC 62.209 60.000 1.66 0.00 0.00 4.85
242 243 4.373116 TCTTCGCCACGTCAGCCC 62.373 66.667 1.66 0.00 0.00 5.19
248 249 4.742201 CCACGTCAGCCCGACAGG 62.742 72.222 4.88 2.22 45.70 4.00
249 250 3.991051 CACGTCAGCCCGACAGGT 61.991 66.667 4.88 0.00 45.70 4.00
250 251 2.282674 ACGTCAGCCCGACAGGTA 60.283 61.111 4.88 0.00 45.70 3.08
251 252 2.341101 ACGTCAGCCCGACAGGTAG 61.341 63.158 4.88 0.00 45.70 3.18
252 253 2.893398 GTCAGCCCGACAGGTAGG 59.107 66.667 0.00 0.00 44.69 3.18
257 258 3.006728 CCCGACAGGTAGGCCCAA 61.007 66.667 0.00 0.00 35.12 4.12
258 259 2.267961 CCGACAGGTAGGCCCAAC 59.732 66.667 0.00 0.00 34.66 3.77
259 260 2.291043 CCGACAGGTAGGCCCAACT 61.291 63.158 0.00 0.00 34.66 3.16
260 261 1.677552 CGACAGGTAGGCCCAACTT 59.322 57.895 0.00 0.00 34.66 2.66
261 262 0.673644 CGACAGGTAGGCCCAACTTG 60.674 60.000 14.34 14.34 34.66 3.16
262 263 0.400594 GACAGGTAGGCCCAACTTGT 59.599 55.000 19.72 19.72 39.57 3.16
263 264 0.850784 ACAGGTAGGCCCAACTTGTT 59.149 50.000 15.48 3.48 33.86 2.83
264 265 2.039348 GACAGGTAGGCCCAACTTGTTA 59.961 50.000 20.35 0.00 37.30 2.41
265 266 2.039879 ACAGGTAGGCCCAACTTGTTAG 59.960 50.000 15.48 0.00 33.86 2.34
266 267 2.039879 CAGGTAGGCCCAACTTGTTAGT 59.960 50.000 0.00 0.00 33.26 2.24
267 268 2.714793 AGGTAGGCCCAACTTGTTAGTT 59.285 45.455 0.00 0.00 45.40 2.24
268 269 3.139584 AGGTAGGCCCAACTTGTTAGTTT 59.860 43.478 0.00 0.00 42.67 2.66
269 270 3.893200 GGTAGGCCCAACTTGTTAGTTTT 59.107 43.478 0.00 0.00 41.85 2.43
270 271 4.261867 GGTAGGCCCAACTTGTTAGTTTTG 60.262 45.833 0.00 0.00 41.85 2.44
271 272 2.102420 AGGCCCAACTTGTTAGTTTTGC 59.898 45.455 0.00 0.00 41.85 3.68
272 273 2.102420 GGCCCAACTTGTTAGTTTTGCT 59.898 45.455 0.00 0.00 41.85 3.91
273 274 3.123050 GCCCAACTTGTTAGTTTTGCTG 58.877 45.455 0.00 0.00 41.85 4.41
274 275 3.430236 GCCCAACTTGTTAGTTTTGCTGT 60.430 43.478 0.00 0.00 41.85 4.40
275 276 4.754322 CCCAACTTGTTAGTTTTGCTGTT 58.246 39.130 0.00 0.00 41.85 3.16
276 277 5.175127 CCCAACTTGTTAGTTTTGCTGTTT 58.825 37.500 0.00 0.00 41.85 2.83
277 278 5.641636 CCCAACTTGTTAGTTTTGCTGTTTT 59.358 36.000 0.00 0.00 41.85 2.43
278 279 6.183360 CCCAACTTGTTAGTTTTGCTGTTTTC 60.183 38.462 0.00 0.00 41.85 2.29
279 280 6.453659 CCAACTTGTTAGTTTTGCTGTTTTCG 60.454 38.462 0.00 0.00 41.85 3.46
280 281 4.561213 ACTTGTTAGTTTTGCTGTTTTCGC 59.439 37.500 0.00 0.00 0.00 4.70
281 282 4.098055 TGTTAGTTTTGCTGTTTTCGCA 57.902 36.364 0.00 0.00 35.22 5.10
282 283 4.486090 TGTTAGTTTTGCTGTTTTCGCAA 58.514 34.783 0.00 0.00 44.83 4.85
283 284 4.560819 TGTTAGTTTTGCTGTTTTCGCAAG 59.439 37.500 0.00 0.00 46.69 4.01
284 285 1.926510 AGTTTTGCTGTTTTCGCAAGC 59.073 42.857 0.00 0.00 46.69 4.01
285 286 1.658095 GTTTTGCTGTTTTCGCAAGCA 59.342 42.857 0.00 0.00 46.69 3.91
286 287 2.001812 TTTGCTGTTTTCGCAAGCAA 57.998 40.000 5.27 5.27 46.69 3.91
287 288 2.001812 TTGCTGTTTTCGCAAGCAAA 57.998 40.000 6.84 0.00 41.97 3.68
288 289 2.222007 TGCTGTTTTCGCAAGCAAAT 57.778 40.000 0.00 0.00 34.42 2.32
289 290 2.126467 TGCTGTTTTCGCAAGCAAATC 58.874 42.857 0.00 0.00 34.42 2.17
290 291 2.126467 GCTGTTTTCGCAAGCAAATCA 58.874 42.857 0.00 0.00 34.42 2.57
291 292 2.154389 GCTGTTTTCGCAAGCAAATCAG 59.846 45.455 15.61 15.61 34.42 2.90
292 293 3.631144 CTGTTTTCGCAAGCAAATCAGA 58.369 40.909 15.22 0.00 36.91 3.27
293 294 4.232221 CTGTTTTCGCAAGCAAATCAGAT 58.768 39.130 15.22 0.00 36.91 2.90
294 295 3.982701 TGTTTTCGCAAGCAAATCAGATG 59.017 39.130 0.00 0.00 34.42 2.90
295 296 4.229096 GTTTTCGCAAGCAAATCAGATGA 58.771 39.130 0.00 0.00 34.42 2.92
296 297 4.707030 TTTCGCAAGCAAATCAGATGAT 57.293 36.364 0.00 0.00 34.49 2.45
297 298 3.957671 TCGCAAGCAAATCAGATGATC 57.042 42.857 0.00 0.00 33.02 2.92
298 299 3.272581 TCGCAAGCAAATCAGATGATCA 58.727 40.909 0.00 0.00 33.02 2.92
299 300 3.311596 TCGCAAGCAAATCAGATGATCAG 59.688 43.478 0.09 0.00 33.02 2.90
300 301 3.064958 CGCAAGCAAATCAGATGATCAGT 59.935 43.478 0.09 0.00 32.75 3.41
301 302 4.271776 CGCAAGCAAATCAGATGATCAGTA 59.728 41.667 0.09 0.00 32.75 2.74
302 303 5.508872 GCAAGCAAATCAGATGATCAGTAC 58.491 41.667 0.09 0.00 32.75 2.73
303 304 5.296283 GCAAGCAAATCAGATGATCAGTACT 59.704 40.000 0.09 0.00 32.75 2.73
304 305 6.511444 GCAAGCAAATCAGATGATCAGTACTC 60.511 42.308 0.09 0.00 32.75 2.59
305 306 6.482898 AGCAAATCAGATGATCAGTACTCT 57.517 37.500 0.09 0.00 32.75 3.24
306 307 6.514947 AGCAAATCAGATGATCAGTACTCTC 58.485 40.000 0.09 0.00 32.75 3.20
307 308 6.324512 AGCAAATCAGATGATCAGTACTCTCT 59.675 38.462 0.09 0.00 32.75 3.10
308 309 6.421501 GCAAATCAGATGATCAGTACTCTCTG 59.578 42.308 13.33 13.33 32.75 3.35
309 310 7.490840 CAAATCAGATGATCAGTACTCTCTGT 58.509 38.462 17.18 6.41 36.85 3.41
310 311 7.658525 AATCAGATGATCAGTACTCTCTGTT 57.341 36.000 17.18 9.49 36.85 3.16
311 312 8.759481 AATCAGATGATCAGTACTCTCTGTTA 57.241 34.615 17.18 4.37 36.85 2.41
312 313 7.561021 TCAGATGATCAGTACTCTCTGTTAC 57.439 40.000 17.18 0.00 36.85 2.50
313 314 6.258947 TCAGATGATCAGTACTCTCTGTTACG 59.741 42.308 17.18 0.00 36.85 3.18
314 315 5.529430 AGATGATCAGTACTCTCTGTTACGG 59.471 44.000 0.09 0.00 36.85 4.02
315 316 4.840271 TGATCAGTACTCTCTGTTACGGA 58.160 43.478 0.00 0.00 36.85 4.69
316 317 4.634883 TGATCAGTACTCTCTGTTACGGAC 59.365 45.833 0.00 0.00 36.85 4.79
317 318 4.283363 TCAGTACTCTCTGTTACGGACT 57.717 45.455 0.00 0.00 36.85 3.85
318 319 5.411831 TCAGTACTCTCTGTTACGGACTA 57.588 43.478 0.00 0.00 36.85 2.59
319 320 5.417811 TCAGTACTCTCTGTTACGGACTAG 58.582 45.833 0.00 0.00 36.85 2.57
320 321 4.571580 CAGTACTCTCTGTTACGGACTAGG 59.428 50.000 0.00 0.00 0.00 3.02
321 322 2.367486 ACTCTCTGTTACGGACTAGGC 58.633 52.381 0.00 0.00 0.00 3.93
322 323 1.331138 CTCTCTGTTACGGACTAGGCG 59.669 57.143 0.00 0.00 0.00 5.52
323 324 0.248539 CTCTGTTACGGACTAGGCGC 60.249 60.000 0.00 0.00 0.00 6.53
324 325 0.961857 TCTGTTACGGACTAGGCGCA 60.962 55.000 10.83 0.00 0.00 6.09
325 326 0.102481 CTGTTACGGACTAGGCGCAT 59.898 55.000 10.83 3.98 0.00 4.73
326 327 0.533491 TGTTACGGACTAGGCGCATT 59.467 50.000 10.83 0.00 0.00 3.56
327 328 1.066716 TGTTACGGACTAGGCGCATTT 60.067 47.619 10.83 0.00 0.00 2.32
328 329 2.004733 GTTACGGACTAGGCGCATTTT 58.995 47.619 10.83 0.00 0.00 1.82
329 330 1.930567 TACGGACTAGGCGCATTTTC 58.069 50.000 10.83 1.29 0.00 2.29
330 331 0.036765 ACGGACTAGGCGCATTTTCA 60.037 50.000 10.83 0.00 0.00 2.69
331 332 1.083489 CGGACTAGGCGCATTTTCAA 58.917 50.000 10.83 0.00 0.00 2.69
332 333 1.670811 CGGACTAGGCGCATTTTCAAT 59.329 47.619 10.83 0.00 0.00 2.57
333 334 2.286418 CGGACTAGGCGCATTTTCAATC 60.286 50.000 10.83 0.00 0.00 2.67
334 335 2.945668 GGACTAGGCGCATTTTCAATCT 59.054 45.455 10.83 0.00 0.00 2.40
335 336 3.378427 GGACTAGGCGCATTTTCAATCTT 59.622 43.478 10.83 0.00 0.00 2.40
336 337 4.142381 GGACTAGGCGCATTTTCAATCTTT 60.142 41.667 10.83 0.00 0.00 2.52
337 338 5.391312 ACTAGGCGCATTTTCAATCTTTT 57.609 34.783 10.83 0.00 0.00 2.27
338 339 5.783111 ACTAGGCGCATTTTCAATCTTTTT 58.217 33.333 10.83 0.00 0.00 1.94
339 340 4.996062 AGGCGCATTTTCAATCTTTTTG 57.004 36.364 10.83 0.00 0.00 2.44
340 341 4.379652 AGGCGCATTTTCAATCTTTTTGT 58.620 34.783 10.83 0.00 0.00 2.83
341 342 4.211794 AGGCGCATTTTCAATCTTTTTGTG 59.788 37.500 10.83 0.00 0.00 3.33
342 343 3.901877 GCGCATTTTCAATCTTTTTGTGC 59.098 39.130 0.30 0.00 32.83 4.57
343 344 4.456914 CGCATTTTCAATCTTTTTGTGCC 58.543 39.130 0.00 0.00 0.00 5.01
344 345 4.611130 CGCATTTTCAATCTTTTTGTGCCC 60.611 41.667 0.00 0.00 0.00 5.36
345 346 4.516321 GCATTTTCAATCTTTTTGTGCCCT 59.484 37.500 0.00 0.00 0.00 5.19
346 347 5.561339 GCATTTTCAATCTTTTTGTGCCCTG 60.561 40.000 0.00 0.00 0.00 4.45
347 348 5.350504 TTTTCAATCTTTTTGTGCCCTGA 57.649 34.783 0.00 0.00 0.00 3.86
348 349 4.320608 TTCAATCTTTTTGTGCCCTGAC 57.679 40.909 0.00 0.00 0.00 3.51
349 350 3.565307 TCAATCTTTTTGTGCCCTGACT 58.435 40.909 0.00 0.00 0.00 3.41
350 351 4.724399 TCAATCTTTTTGTGCCCTGACTA 58.276 39.130 0.00 0.00 0.00 2.59
351 352 5.136828 TCAATCTTTTTGTGCCCTGACTAA 58.863 37.500 0.00 0.00 0.00 2.24
352 353 5.596361 TCAATCTTTTTGTGCCCTGACTAAA 59.404 36.000 0.00 0.00 0.00 1.85
353 354 6.097554 TCAATCTTTTTGTGCCCTGACTAAAA 59.902 34.615 0.00 0.00 32.24 1.52
354 355 6.670695 ATCTTTTTGTGCCCTGACTAAAAT 57.329 33.333 0.00 0.00 32.58 1.82
355 356 6.478512 TCTTTTTGTGCCCTGACTAAAATT 57.521 33.333 0.00 0.00 32.58 1.82
356 357 6.883744 TCTTTTTGTGCCCTGACTAAAATTT 58.116 32.000 0.00 0.00 32.58 1.82
357 358 6.760770 TCTTTTTGTGCCCTGACTAAAATTTG 59.239 34.615 0.00 0.00 32.58 2.32
358 359 5.860941 TTTGTGCCCTGACTAAAATTTGA 57.139 34.783 0.00 0.00 0.00 2.69
359 360 6.418057 TTTGTGCCCTGACTAAAATTTGAT 57.582 33.333 0.00 0.00 0.00 2.57
360 361 7.531857 TTTGTGCCCTGACTAAAATTTGATA 57.468 32.000 0.00 0.00 0.00 2.15
361 362 6.509418 TGTGCCCTGACTAAAATTTGATAC 57.491 37.500 0.00 0.00 0.00 2.24
362 363 5.417580 TGTGCCCTGACTAAAATTTGATACC 59.582 40.000 0.00 0.00 0.00 2.73
363 364 5.417580 GTGCCCTGACTAAAATTTGATACCA 59.582 40.000 0.00 0.00 0.00 3.25
364 365 6.013379 TGCCCTGACTAAAATTTGATACCAA 58.987 36.000 0.00 0.00 0.00 3.67
365 366 6.152661 TGCCCTGACTAAAATTTGATACCAAG 59.847 38.462 0.00 0.00 33.23 3.61
366 367 6.152831 GCCCTGACTAAAATTTGATACCAAGT 59.847 38.462 0.00 0.00 33.23 3.16
367 368 7.309805 GCCCTGACTAAAATTTGATACCAAGTT 60.310 37.037 0.00 0.00 34.29 2.66
368 369 9.238368 CCCTGACTAAAATTTGATACCAAGTTA 57.762 33.333 0.00 0.00 32.09 2.24
386 387 9.847224 ACCAAGTTATTATCATAACCCTAAGTG 57.153 33.333 6.22 0.00 44.23 3.16
387 388 8.784043 CCAAGTTATTATCATAACCCTAAGTGC 58.216 37.037 6.22 0.00 44.23 4.40
388 389 8.495949 CAAGTTATTATCATAACCCTAAGTGCG 58.504 37.037 6.22 0.00 44.23 5.34
389 390 7.159372 AGTTATTATCATAACCCTAAGTGCGG 58.841 38.462 6.22 0.00 44.23 5.69
390 391 5.562298 ATTATCATAACCCTAAGTGCGGT 57.438 39.130 0.00 0.00 0.00 5.68
391 392 2.684001 TCATAACCCTAAGTGCGGTG 57.316 50.000 0.00 0.00 30.96 4.94
392 393 2.181125 TCATAACCCTAAGTGCGGTGA 58.819 47.619 0.00 0.00 30.96 4.02
393 394 2.769663 TCATAACCCTAAGTGCGGTGAT 59.230 45.455 0.00 0.00 30.96 3.06
394 395 3.199071 TCATAACCCTAAGTGCGGTGATT 59.801 43.478 0.00 0.00 30.96 2.57
395 396 2.579410 AACCCTAAGTGCGGTGATTT 57.421 45.000 0.00 0.00 30.96 2.17
396 397 2.579410 ACCCTAAGTGCGGTGATTTT 57.421 45.000 0.00 0.00 0.00 1.82
397 398 3.706600 ACCCTAAGTGCGGTGATTTTA 57.293 42.857 0.00 0.00 0.00 1.52
398 399 3.606687 ACCCTAAGTGCGGTGATTTTAG 58.393 45.455 0.00 0.00 0.00 1.85
399 400 3.262405 ACCCTAAGTGCGGTGATTTTAGA 59.738 43.478 0.00 0.00 0.00 2.10
400 401 4.080526 ACCCTAAGTGCGGTGATTTTAGAT 60.081 41.667 0.00 0.00 0.00 1.98
401 402 5.129815 ACCCTAAGTGCGGTGATTTTAGATA 59.870 40.000 0.00 0.00 0.00 1.98
402 403 6.053005 CCCTAAGTGCGGTGATTTTAGATAA 58.947 40.000 0.00 0.00 0.00 1.75
403 404 6.540914 CCCTAAGTGCGGTGATTTTAGATAAA 59.459 38.462 0.00 0.00 0.00 1.40
404 405 7.228706 CCCTAAGTGCGGTGATTTTAGATAAAT 59.771 37.037 0.00 0.00 0.00 1.40
405 406 9.268268 CCTAAGTGCGGTGATTTTAGATAAATA 57.732 33.333 0.00 0.00 0.00 1.40
408 409 8.732746 AGTGCGGTGATTTTAGATAAATAACT 57.267 30.769 0.00 0.00 0.00 2.24
409 410 8.827677 AGTGCGGTGATTTTAGATAAATAACTC 58.172 33.333 0.00 0.00 0.00 3.01
410 411 8.827677 GTGCGGTGATTTTAGATAAATAACTCT 58.172 33.333 0.00 0.00 0.00 3.24
411 412 9.042008 TGCGGTGATTTTAGATAAATAACTCTC 57.958 33.333 0.00 0.00 0.00 3.20
412 413 8.496751 GCGGTGATTTTAGATAAATAACTCTCC 58.503 37.037 0.00 0.00 0.00 3.71
413 414 9.765795 CGGTGATTTTAGATAAATAACTCTCCT 57.234 33.333 0.00 0.00 0.00 3.69
422 423 8.560124 AGATAAATAACTCTCCTGAAGATGGT 57.440 34.615 0.00 0.00 32.19 3.55
423 424 8.428063 AGATAAATAACTCTCCTGAAGATGGTG 58.572 37.037 0.00 0.00 32.19 4.17
424 425 5.365021 AATAACTCTCCTGAAGATGGTGG 57.635 43.478 0.00 0.00 32.19 4.61
425 426 2.334006 ACTCTCCTGAAGATGGTGGT 57.666 50.000 0.00 0.00 32.19 4.16
426 427 2.183679 ACTCTCCTGAAGATGGTGGTC 58.816 52.381 0.00 0.00 32.19 4.02
427 428 2.182827 CTCTCCTGAAGATGGTGGTCA 58.817 52.381 0.00 0.00 32.19 4.02
428 429 1.902508 TCTCCTGAAGATGGTGGTCAC 59.097 52.381 0.00 0.00 0.00 3.67
444 445 3.148084 ACCAAGGGTGTGACGGAG 58.852 61.111 0.00 0.00 32.98 4.63
445 446 2.347490 CCAAGGGTGTGACGGAGG 59.653 66.667 0.00 0.00 0.00 4.30
446 447 2.358737 CAAGGGTGTGACGGAGGC 60.359 66.667 0.00 0.00 0.00 4.70
447 448 4.003788 AAGGGTGTGACGGAGGCG 62.004 66.667 0.00 0.00 0.00 5.52
451 452 4.980805 GTGTGACGGAGGCGGCAA 62.981 66.667 13.08 0.00 0.00 4.52
452 453 4.680237 TGTGACGGAGGCGGCAAG 62.680 66.667 13.08 4.09 0.00 4.01
453 454 4.373116 GTGACGGAGGCGGCAAGA 62.373 66.667 13.08 0.00 0.00 3.02
454 455 4.069232 TGACGGAGGCGGCAAGAG 62.069 66.667 13.08 1.65 0.00 2.85
455 456 4.070552 GACGGAGGCGGCAAGAGT 62.071 66.667 13.08 5.35 0.00 3.24
456 457 4.379243 ACGGAGGCGGCAAGAGTG 62.379 66.667 13.08 0.00 0.00 3.51
464 465 4.695560 GGCAAGAGTGGCTAACGT 57.304 55.556 0.00 0.00 46.62 3.99
465 466 2.162716 GGCAAGAGTGGCTAACGTG 58.837 57.895 0.00 0.00 46.62 4.49
466 467 1.298859 GGCAAGAGTGGCTAACGTGG 61.299 60.000 0.00 0.00 46.62 4.94
467 468 0.320421 GCAAGAGTGGCTAACGTGGA 60.320 55.000 0.00 0.00 0.00 4.02
468 469 1.676014 GCAAGAGTGGCTAACGTGGAT 60.676 52.381 0.00 0.00 0.00 3.41
469 470 2.271800 CAAGAGTGGCTAACGTGGATC 58.728 52.381 0.00 0.00 0.00 3.36
470 471 1.557099 AGAGTGGCTAACGTGGATCA 58.443 50.000 0.00 0.00 0.00 2.92
471 472 1.478510 AGAGTGGCTAACGTGGATCAG 59.521 52.381 0.00 0.00 0.00 2.90
472 473 1.476891 GAGTGGCTAACGTGGATCAGA 59.523 52.381 0.00 0.00 0.00 3.27
473 474 1.899814 AGTGGCTAACGTGGATCAGAA 59.100 47.619 0.00 0.00 0.00 3.02
474 475 2.093973 AGTGGCTAACGTGGATCAGAAG 60.094 50.000 0.00 0.00 0.00 2.85
475 476 1.899814 TGGCTAACGTGGATCAGAAGT 59.100 47.619 0.00 0.00 0.00 3.01
476 477 3.093814 TGGCTAACGTGGATCAGAAGTA 58.906 45.455 0.00 0.00 0.00 2.24
477 478 3.704566 TGGCTAACGTGGATCAGAAGTAT 59.295 43.478 0.00 0.00 0.00 2.12
478 479 4.891168 TGGCTAACGTGGATCAGAAGTATA 59.109 41.667 0.00 0.00 0.00 1.47
479 480 5.361571 TGGCTAACGTGGATCAGAAGTATAA 59.638 40.000 0.00 0.00 0.00 0.98
480 481 5.921408 GGCTAACGTGGATCAGAAGTATAAG 59.079 44.000 0.00 0.00 0.00 1.73
481 482 5.402867 GCTAACGTGGATCAGAAGTATAAGC 59.597 44.000 0.00 0.00 0.00 3.09
482 483 5.339008 AACGTGGATCAGAAGTATAAGCA 57.661 39.130 0.00 0.00 0.00 3.91
483 484 5.537300 ACGTGGATCAGAAGTATAAGCAT 57.463 39.130 0.00 0.00 0.00 3.79
484 485 5.533482 ACGTGGATCAGAAGTATAAGCATC 58.467 41.667 0.00 0.00 0.00 3.91
485 486 5.303078 ACGTGGATCAGAAGTATAAGCATCT 59.697 40.000 0.00 0.00 0.00 2.90
486 487 5.632764 CGTGGATCAGAAGTATAAGCATCTG 59.367 44.000 0.00 0.00 40.46 2.90
487 488 5.931146 GTGGATCAGAAGTATAAGCATCTGG 59.069 44.000 0.00 0.00 39.74 3.86
488 489 5.604231 TGGATCAGAAGTATAAGCATCTGGT 59.396 40.000 0.00 0.00 39.74 4.00
489 490 5.931146 GGATCAGAAGTATAAGCATCTGGTG 59.069 44.000 0.00 0.00 39.74 4.17
490 491 5.939764 TCAGAAGTATAAGCATCTGGTGT 57.060 39.130 0.00 0.00 39.74 4.16
491 492 5.907207 TCAGAAGTATAAGCATCTGGTGTC 58.093 41.667 0.00 0.00 39.74 3.67
492 493 5.422012 TCAGAAGTATAAGCATCTGGTGTCA 59.578 40.000 0.00 0.00 39.74 3.58
493 494 5.521735 CAGAAGTATAAGCATCTGGTGTCAC 59.478 44.000 0.00 0.00 36.50 3.67
494 495 5.187772 AGAAGTATAAGCATCTGGTGTCACA 59.812 40.000 5.12 0.00 0.00 3.58
495 496 5.620738 AGTATAAGCATCTGGTGTCACAT 57.379 39.130 5.12 0.00 0.00 3.21
496 497 5.363101 AGTATAAGCATCTGGTGTCACATG 58.637 41.667 5.12 1.48 0.00 3.21
497 498 2.865119 AAGCATCTGGTGTCACATGA 57.135 45.000 5.12 2.56 0.00 3.07
498 499 2.105006 AGCATCTGGTGTCACATGAC 57.895 50.000 5.12 5.02 44.97 3.06
499 500 1.089920 GCATCTGGTGTCACATGACC 58.910 55.000 9.48 0.00 44.15 4.02
500 501 1.611410 GCATCTGGTGTCACATGACCA 60.611 52.381 9.48 1.11 44.15 4.02
502 503 4.798433 TGGTGTCACATGACCAGC 57.202 55.556 9.48 7.82 44.15 4.85
503 504 1.835693 TGGTGTCACATGACCAGCA 59.164 52.632 9.48 9.99 44.15 4.41
504 505 0.250424 TGGTGTCACATGACCAGCAG 60.250 55.000 9.48 0.00 44.15 4.24
505 506 0.250467 GGTGTCACATGACCAGCAGT 60.250 55.000 9.48 0.00 44.15 4.40
506 507 1.597742 GTGTCACATGACCAGCAGTT 58.402 50.000 9.48 0.00 44.15 3.16
507 508 1.532868 GTGTCACATGACCAGCAGTTC 59.467 52.381 9.48 0.00 44.15 3.01
508 509 1.140652 TGTCACATGACCAGCAGTTCA 59.859 47.619 9.48 0.00 44.15 3.18
509 510 2.224597 TGTCACATGACCAGCAGTTCAT 60.225 45.455 9.48 0.00 44.15 2.57
510 511 2.161012 GTCACATGACCAGCAGTTCATG 59.839 50.000 13.90 13.90 43.80 3.07
511 512 5.504806 GTCACATGACCAGCAGTTCATGC 62.505 52.174 15.15 0.00 46.09 4.06
529 530 2.927028 TGCAGCAATGCATACTGATCT 58.073 42.857 25.94 3.87 40.23 2.75
530 531 2.616842 TGCAGCAATGCATACTGATCTG 59.383 45.455 25.94 14.50 40.23 2.90
531 532 2.876550 GCAGCAATGCATACTGATCTGA 59.123 45.455 25.94 0.00 33.10 3.27
532 533 3.058846 GCAGCAATGCATACTGATCTGAG 60.059 47.826 25.94 7.14 33.10 3.35
533 534 4.127907 CAGCAATGCATACTGATCTGAGT 58.872 43.478 19.94 0.00 33.10 3.41
534 535 4.211584 CAGCAATGCATACTGATCTGAGTC 59.788 45.833 19.94 0.00 33.10 3.36
535 536 4.101274 AGCAATGCATACTGATCTGAGTCT 59.899 41.667 8.35 0.00 0.00 3.24
536 537 4.211584 GCAATGCATACTGATCTGAGTCTG 59.788 45.833 0.00 0.83 0.00 3.51
537 538 5.598769 CAATGCATACTGATCTGAGTCTGA 58.401 41.667 0.00 1.83 0.00 3.27
538 539 4.645762 TGCATACTGATCTGAGTCTGAC 57.354 45.455 6.60 0.00 0.00 3.51
539 540 3.065925 TGCATACTGATCTGAGTCTGACG 59.934 47.826 6.60 0.00 0.00 4.35
540 541 3.066064 GCATACTGATCTGAGTCTGACGT 59.934 47.826 6.60 0.00 0.00 4.34
541 542 4.596097 CATACTGATCTGAGTCTGACGTG 58.404 47.826 6.60 0.00 0.00 4.49
542 543 1.201181 ACTGATCTGAGTCTGACGTGC 59.799 52.381 6.60 0.00 0.00 5.34
543 544 1.472082 CTGATCTGAGTCTGACGTGCT 59.528 52.381 0.00 0.00 0.00 4.40
544 545 1.470494 TGATCTGAGTCTGACGTGCTC 59.530 52.381 0.00 0.00 0.00 4.26
545 546 1.742831 GATCTGAGTCTGACGTGCTCT 59.257 52.381 0.00 0.00 0.00 4.09
546 547 1.610363 TCTGAGTCTGACGTGCTCTT 58.390 50.000 0.00 0.00 0.00 2.85
547 548 1.537638 TCTGAGTCTGACGTGCTCTTC 59.462 52.381 0.00 0.00 0.00 2.87
548 549 0.598562 TGAGTCTGACGTGCTCTTCC 59.401 55.000 0.00 0.00 0.00 3.46
549 550 0.598562 GAGTCTGACGTGCTCTTCCA 59.401 55.000 0.00 0.00 0.00 3.53
550 551 0.600557 AGTCTGACGTGCTCTTCCAG 59.399 55.000 0.00 0.00 0.00 3.86
551 552 0.315568 GTCTGACGTGCTCTTCCAGT 59.684 55.000 0.00 0.00 0.00 4.00
552 553 0.315251 TCTGACGTGCTCTTCCAGTG 59.685 55.000 0.00 0.00 0.00 3.66
553 554 0.032678 CTGACGTGCTCTTCCAGTGT 59.967 55.000 0.00 0.00 0.00 3.55
554 555 0.464036 TGACGTGCTCTTCCAGTGTT 59.536 50.000 0.00 0.00 0.00 3.32
555 556 1.684450 TGACGTGCTCTTCCAGTGTTA 59.316 47.619 0.00 0.00 0.00 2.41
556 557 2.299013 TGACGTGCTCTTCCAGTGTTAT 59.701 45.455 0.00 0.00 0.00 1.89
557 558 2.924290 GACGTGCTCTTCCAGTGTTATC 59.076 50.000 0.00 0.00 0.00 1.75
558 559 2.271800 CGTGCTCTTCCAGTGTTATCC 58.728 52.381 0.00 0.00 0.00 2.59
559 560 2.353704 CGTGCTCTTCCAGTGTTATCCA 60.354 50.000 0.00 0.00 0.00 3.41
560 561 3.265791 GTGCTCTTCCAGTGTTATCCAG 58.734 50.000 0.00 0.00 0.00 3.86
561 562 2.237143 TGCTCTTCCAGTGTTATCCAGG 59.763 50.000 0.00 0.00 0.00 4.45
562 563 2.420687 GCTCTTCCAGTGTTATCCAGGG 60.421 54.545 0.00 0.00 0.00 4.45
563 564 1.559682 TCTTCCAGTGTTATCCAGGGC 59.440 52.381 0.00 0.00 0.00 5.19
564 565 0.623723 TTCCAGTGTTATCCAGGGCC 59.376 55.000 0.00 0.00 0.00 5.80
565 566 0.548926 TCCAGTGTTATCCAGGGCCA 60.549 55.000 6.18 0.00 0.00 5.36
566 567 0.331278 CCAGTGTTATCCAGGGCCAA 59.669 55.000 6.18 0.00 0.00 4.52
567 568 1.683011 CCAGTGTTATCCAGGGCCAAG 60.683 57.143 6.18 0.00 0.00 3.61
568 569 1.281867 CAGTGTTATCCAGGGCCAAGA 59.718 52.381 6.18 1.18 0.00 3.02
569 570 1.992557 AGTGTTATCCAGGGCCAAGAA 59.007 47.619 6.18 0.00 0.00 2.52
570 571 2.582636 AGTGTTATCCAGGGCCAAGAAT 59.417 45.455 6.18 0.00 0.00 2.40
571 572 2.689983 GTGTTATCCAGGGCCAAGAATG 59.310 50.000 6.18 0.00 0.00 2.67
580 581 3.985877 CCAAGAATGGTGCGCTGA 58.014 55.556 9.73 0.00 42.18 4.26
581 582 1.503542 CCAAGAATGGTGCGCTGAC 59.496 57.895 9.73 0.00 42.18 3.51
582 583 0.957395 CCAAGAATGGTGCGCTGACT 60.957 55.000 9.73 0.00 42.18 3.41
583 584 0.877071 CAAGAATGGTGCGCTGACTT 59.123 50.000 9.73 3.12 0.00 3.01
584 585 0.877071 AAGAATGGTGCGCTGACTTG 59.123 50.000 9.73 0.00 0.00 3.16
585 586 0.035317 AGAATGGTGCGCTGACTTGA 59.965 50.000 9.73 0.00 0.00 3.02
586 587 0.874390 GAATGGTGCGCTGACTTGAA 59.126 50.000 9.73 0.00 0.00 2.69
587 588 0.877071 AATGGTGCGCTGACTTGAAG 59.123 50.000 9.73 0.00 0.00 3.02
588 589 0.957395 ATGGTGCGCTGACTTGAAGG 60.957 55.000 9.73 0.00 0.00 3.46
589 590 1.598130 GGTGCGCTGACTTGAAGGT 60.598 57.895 9.73 0.00 0.00 3.50
593 594 1.333619 TGCGCTGACTTGAAGGTTTTC 59.666 47.619 9.73 0.00 0.00 2.29
595 596 1.069906 CGCTGACTTGAAGGTTTTCCG 60.070 52.381 0.00 0.00 46.35 4.30
602 603 0.313672 TGAAGGTTTTCCGCATGCAC 59.686 50.000 19.57 7.57 46.35 4.57
612 613 2.472059 CGCATGCACGGGCTGTAAT 61.472 57.895 19.57 0.00 41.91 1.89
613 614 1.356624 GCATGCACGGGCTGTAATC 59.643 57.895 12.74 0.00 41.91 1.75
669 670 2.975732 TCAGCTGGTCTGATGTGATC 57.024 50.000 15.13 0.00 46.34 2.92
670 671 2.464782 TCAGCTGGTCTGATGTGATCT 58.535 47.619 15.13 0.00 46.34 2.75
683 684 4.869861 TGATGTGATCTTCGTACCATGTTG 59.130 41.667 0.00 0.00 0.00 3.33
684 685 4.529109 TGTGATCTTCGTACCATGTTGA 57.471 40.909 0.00 0.00 0.00 3.18
685 686 5.084818 TGTGATCTTCGTACCATGTTGAT 57.915 39.130 0.00 0.00 0.00 2.57
704 754 0.605319 TTCCACGTCTCCATGCAACC 60.605 55.000 0.00 0.00 0.00 3.77
848 920 1.766143 GATCACCGCAGTGGATTCGC 61.766 60.000 7.13 0.00 44.64 4.70
903 975 4.309950 AACACCGGTGAGGCGGTC 62.310 66.667 40.21 0.00 46.52 4.79
994 1071 1.266718 CTAGGAGAGCAGCTGATCGAC 59.733 57.143 25.12 20.91 35.26 4.20
1029 1106 2.821688 CGTCGCGTACCTCCTCCTC 61.822 68.421 5.77 0.00 0.00 3.71
1576 1656 1.444553 GTCGAGTGCCTCCAGTTCG 60.445 63.158 0.00 0.00 33.16 3.95
1578 1658 2.343758 GAGTGCCTCCAGTTCGCA 59.656 61.111 0.00 0.00 0.00 5.10
1611 1691 0.599060 TCACGTACATGTGCTTCGGA 59.401 50.000 9.11 0.00 39.73 4.55
1725 1805 4.129737 GCGCTCACCACGAGGCTA 62.130 66.667 0.00 0.00 42.55 3.93
1734 1814 4.587189 ACGAGGCTATTCCGGCGC 62.587 66.667 0.00 0.00 39.84 6.53
1816 1896 0.389166 AGCAAGAAGAGAACGGAGCG 60.389 55.000 0.00 0.00 0.00 5.03
1947 2027 3.538614 GCCGAGATGGTGAGCCTA 58.461 61.111 0.00 0.00 41.21 3.93
2046 2126 1.531840 GGAGATCCAGGCGAGGCTA 60.532 63.158 0.00 0.00 35.64 3.93
2048 2128 1.075970 AGATCCAGGCGAGGCTACA 60.076 57.895 0.00 0.00 0.00 2.74
2052 2132 2.496817 CAGGCGAGGCTACAGGAC 59.503 66.667 0.00 0.00 0.00 3.85
2082 2162 2.104331 GCGATCACCGACGACCAT 59.896 61.111 0.00 0.00 41.76 3.55
2133 2216 2.264794 CGCTACCTGAAGGCGGTT 59.735 61.111 0.00 0.00 44.32 4.44
2268 2351 2.279918 GTGGCGGACGTGTCACTT 60.280 61.111 0.00 0.00 0.00 3.16
2284 2367 1.137086 CACTTGACGAGGAGGTATGGG 59.863 57.143 0.00 0.00 0.00 4.00
2288 2371 2.445845 CGAGGAGGTATGGGGCCA 60.446 66.667 4.39 0.00 0.00 5.36
2478 2561 2.651361 CGGTTCGAGTGGTCTGCT 59.349 61.111 0.00 0.00 0.00 4.24
2487 2570 3.695606 TGGTCTGCTGCGGAGGAC 61.696 66.667 12.25 5.40 0.00 3.85
2611 2694 0.831711 AAACCATCACACTTGGGGCC 60.832 55.000 0.00 0.00 38.64 5.80
2625 2708 0.699981 GGGGCCAGGGTAACAACTTA 59.300 55.000 4.39 0.00 39.74 2.24
2640 2723 8.789762 GGTAACAACTTAATACCACATTCAAGT 58.210 33.333 0.00 0.00 39.12 3.16
2651 2734 2.559668 CACATTCAAGTCAGGGCACAAT 59.440 45.455 0.00 0.00 0.00 2.71
2658 2741 3.456380 AGTCAGGGCACAATAAACCAT 57.544 42.857 0.00 0.00 0.00 3.55
2675 2758 5.590530 AACCATCAAAAATGCGCCTAATA 57.409 34.783 4.18 0.00 0.00 0.98
2739 2822 2.692273 GAAACCGACAAGTGGGGCCT 62.692 60.000 0.84 0.00 32.24 5.19
2767 2850 1.738099 GCTGACGTGGTGTGCCTAG 60.738 63.158 0.00 0.00 35.27 3.02
2790 2873 3.256631 GTGGACAATTTGCTGAGTTGGAT 59.743 43.478 0.00 0.00 0.00 3.41
2813 2897 2.359900 GGTCCCACATGTCAATGACTC 58.640 52.381 14.97 0.00 37.24 3.36
2824 2908 6.311445 ACATGTCAATGACTCGAGTGTTTATC 59.689 38.462 25.58 7.85 37.24 1.75
2879 2977 4.559153 GCATTTCAACAAACAGGCTATGT 58.441 39.130 0.00 0.00 46.97 2.29
2892 2990 0.994995 GCTATGTGCGTGTCTGTCAG 59.005 55.000 0.00 0.00 0.00 3.51
2893 2991 1.633561 CTATGTGCGTGTCTGTCAGG 58.366 55.000 0.00 0.00 35.34 3.86
2914 3012 4.988716 ACCACGACCAGGCGAGGA 62.989 66.667 16.58 0.00 43.38 3.71
2951 3049 3.447025 GAAGCCGGCCGATACAGCT 62.447 63.158 30.73 23.70 34.64 4.24
2960 3058 1.519234 CGATACAGCTGCGGCAAGA 60.519 57.895 21.93 3.76 41.70 3.02
2964 3062 0.250234 TACAGCTGCGGCAAGAAGAT 59.750 50.000 21.93 0.00 41.70 2.40
2972 3070 1.821332 GGCAAGAAGATGCTCGGGG 60.821 63.158 0.00 0.00 45.68 5.73
3032 3131 3.181967 CTCGAGCGCAAAGGACGG 61.182 66.667 11.47 0.00 0.00 4.79
3033 3132 3.916392 CTCGAGCGCAAAGGACGGT 62.916 63.158 11.47 0.00 45.07 4.83
3039 3138 1.017177 GCGCAAAGGACGGTGATGTA 61.017 55.000 0.30 0.00 0.00 2.29
3051 3150 1.555075 GGTGATGTAGTGCCAGGAAGA 59.445 52.381 0.00 0.00 0.00 2.87
3059 3158 0.037326 GTGCCAGGAAGACGATGTCA 60.037 55.000 0.00 0.00 34.60 3.58
3069 3168 2.951745 CGATGTCAGACTCGCCGC 60.952 66.667 1.31 0.00 0.00 6.53
3229 3338 1.690219 CCTCCATTAGCCCGAGCAGT 61.690 60.000 0.00 0.00 43.56 4.40
3231 3340 0.750850 TCCATTAGCCCGAGCAGTAC 59.249 55.000 0.00 0.00 43.56 2.73
3242 3351 4.137872 GCAGTACGCCCCGCACTA 62.138 66.667 0.00 0.00 31.26 2.74
3244 3353 2.362120 AGTACGCCCCGCACTAGT 60.362 61.111 0.00 0.00 31.26 2.57
3245 3354 2.103736 GTACGCCCCGCACTAGTC 59.896 66.667 0.00 0.00 0.00 2.59
3270 3389 2.125147 CCGATGCTTCTTCCGCCA 60.125 61.111 0.00 0.00 0.00 5.69
3271 3390 2.464459 CCGATGCTTCTTCCGCCAC 61.464 63.158 0.00 0.00 0.00 5.01
3272 3391 2.464459 CGATGCTTCTTCCGCCACC 61.464 63.158 0.00 0.00 0.00 4.61
3273 3392 2.044946 ATGCTTCTTCCGCCACCC 60.045 61.111 0.00 0.00 0.00 4.61
3274 3393 2.819984 GATGCTTCTTCCGCCACCCA 62.820 60.000 0.00 0.00 0.00 4.51
3275 3394 2.747855 GCTTCTTCCGCCACCCAG 60.748 66.667 0.00 0.00 0.00 4.45
3290 3409 2.185350 CAGGCCAGCCACTAGTCG 59.815 66.667 12.03 0.00 38.92 4.18
3291 3410 3.775654 AGGCCAGCCACTAGTCGC 61.776 66.667 12.03 4.04 38.92 5.19
3294 3413 4.135153 CCAGCCACTAGTCGCGCT 62.135 66.667 5.56 4.52 0.00 5.92
3319 3438 4.893601 GGCCGCCTTCCGCTAGTC 62.894 72.222 0.71 0.00 35.03 2.59
3446 3565 1.064825 AGATTGAGTTCCAACGGGGT 58.935 50.000 0.00 0.00 37.63 4.95
3449 3568 1.637724 TTGAGTTCCAACGGGGTGGT 61.638 55.000 2.12 0.00 39.88 4.16
3470 3589 2.513897 GCACGGATGGTAGGTGGC 60.514 66.667 0.00 0.00 32.42 5.01
3472 3591 1.682451 GCACGGATGGTAGGTGGCTA 61.682 60.000 0.00 0.00 32.42 3.93
3509 3628 4.838152 CGGTGGTGGGATGGCTCG 62.838 72.222 0.00 0.00 0.00 5.03
3546 3665 4.626081 GCGGCGTGGGATATGGCT 62.626 66.667 9.37 0.00 38.64 4.75
3547 3666 3.056458 CGGCGTGGGATATGGCTA 58.944 61.111 0.00 0.00 38.64 3.93
3552 3671 1.945819 GCGTGGGATATGGCTATGGTG 60.946 57.143 0.00 0.00 0.00 4.17
3553 3672 1.826385 GTGGGATATGGCTATGGTGC 58.174 55.000 0.00 0.00 0.00 5.01
3556 3675 0.324943 GGATATGGCTATGGTGCGGT 59.675 55.000 0.00 0.00 0.00 5.68
3582 3701 4.910458 TTTTTACAGGAGGAAGGAGGAG 57.090 45.455 0.00 0.00 0.00 3.69
3630 3749 2.124529 GCCTTAGGCCACCTCAGC 60.125 66.667 13.12 0.00 44.06 4.26
3654 3773 1.746157 TATCCACATAGGCAGGCCAT 58.254 50.000 13.63 1.37 38.92 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.722700 CACAGGAAGGGCCCACCG 62.723 72.222 27.56 22.25 46.96 4.94
33 34 2.674220 GGAGGAGGCACAGGAAGGG 61.674 68.421 0.00 0.00 0.00 3.95
34 35 2.674220 GGGAGGAGGCACAGGAAGG 61.674 68.421 0.00 0.00 0.00 3.46
35 36 1.204113 AAGGGAGGAGGCACAGGAAG 61.204 60.000 0.00 0.00 0.00 3.46
36 37 0.772124 AAAGGGAGGAGGCACAGGAA 60.772 55.000 0.00 0.00 0.00 3.36
37 38 1.151810 AAAGGGAGGAGGCACAGGA 60.152 57.895 0.00 0.00 0.00 3.86
38 39 1.301293 GAAAGGGAGGAGGCACAGG 59.699 63.158 0.00 0.00 0.00 4.00
39 40 1.204113 AGGAAAGGGAGGAGGCACAG 61.204 60.000 0.00 0.00 0.00 3.66
40 41 1.151810 AGGAAAGGGAGGAGGCACA 60.152 57.895 0.00 0.00 0.00 4.57
41 42 1.604915 GAGGAAAGGGAGGAGGCAC 59.395 63.158 0.00 0.00 0.00 5.01
42 43 1.616628 GGAGGAAAGGGAGGAGGCA 60.617 63.158 0.00 0.00 0.00 4.75
43 44 2.379459 GGGAGGAAAGGGAGGAGGC 61.379 68.421 0.00 0.00 0.00 4.70
44 45 2.066999 CGGGAGGAAAGGGAGGAGG 61.067 68.421 0.00 0.00 0.00 4.30
45 46 0.617820 TTCGGGAGGAAAGGGAGGAG 60.618 60.000 0.00 0.00 0.00 3.69
46 47 0.617820 CTTCGGGAGGAAAGGGAGGA 60.618 60.000 0.00 0.00 33.34 3.71
47 48 0.617820 TCTTCGGGAGGAAAGGGAGG 60.618 60.000 0.00 0.00 33.34 4.30
48 49 0.537653 GTCTTCGGGAGGAAAGGGAG 59.462 60.000 0.00 0.00 33.34 4.30
49 50 0.908180 GGTCTTCGGGAGGAAAGGGA 60.908 60.000 0.00 0.00 33.34 4.20
50 51 1.198759 TGGTCTTCGGGAGGAAAGGG 61.199 60.000 0.00 0.00 33.34 3.95
51 52 0.912486 ATGGTCTTCGGGAGGAAAGG 59.088 55.000 0.00 0.00 33.34 3.11
52 53 1.834263 AGATGGTCTTCGGGAGGAAAG 59.166 52.381 0.00 0.00 33.34 2.62
53 54 1.831736 GAGATGGTCTTCGGGAGGAAA 59.168 52.381 0.00 0.00 33.34 3.13
54 55 1.486211 GAGATGGTCTTCGGGAGGAA 58.514 55.000 0.00 0.00 0.00 3.36
55 56 0.397254 GGAGATGGTCTTCGGGAGGA 60.397 60.000 0.00 0.00 0.00 3.71
56 57 1.739338 CGGAGATGGTCTTCGGGAGG 61.739 65.000 0.00 0.00 41.66 4.30
57 58 1.736586 CGGAGATGGTCTTCGGGAG 59.263 63.158 0.00 0.00 41.66 4.30
58 59 3.935024 CGGAGATGGTCTTCGGGA 58.065 61.111 0.00 0.00 41.66 5.14
67 68 2.537560 GCGCATTGACCGGAGATGG 61.538 63.158 9.46 4.78 0.00 3.51
68 69 2.537560 GGCGCATTGACCGGAGATG 61.538 63.158 9.46 10.26 0.00 2.90
69 70 2.203070 GGCGCATTGACCGGAGAT 60.203 61.111 9.46 0.00 0.00 2.75
70 71 4.467084 GGGCGCATTGACCGGAGA 62.467 66.667 9.46 0.00 34.57 3.71
101 102 4.803426 GACTGCTGGTCCGGAGCG 62.803 72.222 27.33 21.83 39.47 5.03
102 103 4.803426 CGACTGCTGGTCCGGAGC 62.803 72.222 26.70 26.70 41.64 4.70
103 104 4.803426 GCGACTGCTGGTCCGGAG 62.803 72.222 3.06 0.00 41.64 4.63
111 112 2.671177 CGTTTCCCTGCGACTGCTG 61.671 63.158 0.00 0.00 43.34 4.41
112 113 2.357517 CGTTTCCCTGCGACTGCT 60.358 61.111 0.00 0.00 43.34 4.24
113 114 2.357034 TCGTTTCCCTGCGACTGC 60.357 61.111 0.00 0.00 43.20 4.40
117 118 2.257371 CTCGTCGTTTCCCTGCGA 59.743 61.111 0.00 0.00 34.54 5.10
118 119 2.758770 TTCCTCGTCGTTTCCCTGCG 62.759 60.000 0.00 0.00 0.00 5.18
119 120 1.005394 TTCCTCGTCGTTTCCCTGC 60.005 57.895 0.00 0.00 0.00 4.85
120 121 0.601558 TCTTCCTCGTCGTTTCCCTG 59.398 55.000 0.00 0.00 0.00 4.45
121 122 1.272769 CTTCTTCCTCGTCGTTTCCCT 59.727 52.381 0.00 0.00 0.00 4.20
122 123 1.271656 TCTTCTTCCTCGTCGTTTCCC 59.728 52.381 0.00 0.00 0.00 3.97
123 124 2.719426 TCTTCTTCCTCGTCGTTTCC 57.281 50.000 0.00 0.00 0.00 3.13
124 125 3.898529 TCTTCTTCTTCCTCGTCGTTTC 58.101 45.455 0.00 0.00 0.00 2.78
125 126 4.522722 ATCTTCTTCTTCCTCGTCGTTT 57.477 40.909 0.00 0.00 0.00 3.60
126 127 5.640189 TTATCTTCTTCTTCCTCGTCGTT 57.360 39.130 0.00 0.00 0.00 3.85
127 128 5.640189 TTTATCTTCTTCTTCCTCGTCGT 57.360 39.130 0.00 0.00 0.00 4.34
128 129 6.035112 CCTTTTTATCTTCTTCTTCCTCGTCG 59.965 42.308 0.00 0.00 0.00 5.12
129 130 7.097834 TCCTTTTTATCTTCTTCTTCCTCGTC 58.902 38.462 0.00 0.00 0.00 4.20
130 131 7.005709 TCCTTTTTATCTTCTTCTTCCTCGT 57.994 36.000 0.00 0.00 0.00 4.18
131 132 7.324178 TCTCCTTTTTATCTTCTTCTTCCTCG 58.676 38.462 0.00 0.00 0.00 4.63
132 133 9.508642 TTTCTCCTTTTTATCTTCTTCTTCCTC 57.491 33.333 0.00 0.00 0.00 3.71
133 134 9.513906 CTTTCTCCTTTTTATCTTCTTCTTCCT 57.486 33.333 0.00 0.00 0.00 3.36
134 135 9.508642 TCTTTCTCCTTTTTATCTTCTTCTTCC 57.491 33.333 0.00 0.00 0.00 3.46
136 137 9.853177 TGTCTTTCTCCTTTTTATCTTCTTCTT 57.147 29.630 0.00 0.00 0.00 2.52
137 138 9.853177 TTGTCTTTCTCCTTTTTATCTTCTTCT 57.147 29.630 0.00 0.00 0.00 2.85
139 140 9.072375 CCTTGTCTTTCTCCTTTTTATCTTCTT 57.928 33.333 0.00 0.00 0.00 2.52
140 141 8.440771 TCCTTGTCTTTCTCCTTTTTATCTTCT 58.559 33.333 0.00 0.00 0.00 2.85
141 142 8.622948 TCCTTGTCTTTCTCCTTTTTATCTTC 57.377 34.615 0.00 0.00 0.00 2.87
142 143 7.175816 GCTCCTTGTCTTTCTCCTTTTTATCTT 59.824 37.037 0.00 0.00 0.00 2.40
143 144 6.657117 GCTCCTTGTCTTTCTCCTTTTTATCT 59.343 38.462 0.00 0.00 0.00 1.98
144 145 6.402658 CGCTCCTTGTCTTTCTCCTTTTTATC 60.403 42.308 0.00 0.00 0.00 1.75
145 146 5.412904 CGCTCCTTGTCTTTCTCCTTTTTAT 59.587 40.000 0.00 0.00 0.00 1.40
146 147 4.755123 CGCTCCTTGTCTTTCTCCTTTTTA 59.245 41.667 0.00 0.00 0.00 1.52
147 148 3.565902 CGCTCCTTGTCTTTCTCCTTTTT 59.434 43.478 0.00 0.00 0.00 1.94
148 149 3.142174 CGCTCCTTGTCTTTCTCCTTTT 58.858 45.455 0.00 0.00 0.00 2.27
149 150 2.368875 TCGCTCCTTGTCTTTCTCCTTT 59.631 45.455 0.00 0.00 0.00 3.11
150 151 1.971357 TCGCTCCTTGTCTTTCTCCTT 59.029 47.619 0.00 0.00 0.00 3.36
151 152 1.273886 GTCGCTCCTTGTCTTTCTCCT 59.726 52.381 0.00 0.00 0.00 3.69
152 153 1.273886 AGTCGCTCCTTGTCTTTCTCC 59.726 52.381 0.00 0.00 0.00 3.71
153 154 2.029828 TCAGTCGCTCCTTGTCTTTCTC 60.030 50.000 0.00 0.00 0.00 2.87
154 155 1.964223 TCAGTCGCTCCTTGTCTTTCT 59.036 47.619 0.00 0.00 0.00 2.52
155 156 2.062519 GTCAGTCGCTCCTTGTCTTTC 58.937 52.381 0.00 0.00 0.00 2.62
156 157 1.689273 AGTCAGTCGCTCCTTGTCTTT 59.311 47.619 0.00 0.00 0.00 2.52
157 158 1.000283 CAGTCAGTCGCTCCTTGTCTT 60.000 52.381 0.00 0.00 0.00 3.01
158 159 0.600557 CAGTCAGTCGCTCCTTGTCT 59.399 55.000 0.00 0.00 0.00 3.41
159 160 0.389166 CCAGTCAGTCGCTCCTTGTC 60.389 60.000 0.00 0.00 0.00 3.18
160 161 1.115930 ACCAGTCAGTCGCTCCTTGT 61.116 55.000 0.00 0.00 0.00 3.16
161 162 0.668706 CACCAGTCAGTCGCTCCTTG 60.669 60.000 0.00 0.00 0.00 3.61
162 163 1.668294 CACCAGTCAGTCGCTCCTT 59.332 57.895 0.00 0.00 0.00 3.36
163 164 2.279069 CCACCAGTCAGTCGCTCCT 61.279 63.158 0.00 0.00 0.00 3.69
164 165 2.262915 CCACCAGTCAGTCGCTCC 59.737 66.667 0.00 0.00 0.00 4.70
165 166 2.262915 CCCACCAGTCAGTCGCTC 59.737 66.667 0.00 0.00 0.00 5.03
166 167 2.524394 ACCCACCAGTCAGTCGCT 60.524 61.111 0.00 0.00 0.00 4.93
167 168 2.048127 GACCCACCAGTCAGTCGC 60.048 66.667 0.00 0.00 36.73 5.19
168 169 2.657237 GGACCCACCAGTCAGTCG 59.343 66.667 0.00 0.00 38.59 4.18
169 170 3.069778 GGGACCCACCAGTCAGTC 58.930 66.667 5.33 0.00 41.20 3.51
182 183 3.049080 GCTGAGGTGGATGGGGGAC 62.049 68.421 0.00 0.00 0.00 4.46
183 184 2.692368 GCTGAGGTGGATGGGGGA 60.692 66.667 0.00 0.00 0.00 4.81
184 185 2.693864 AGCTGAGGTGGATGGGGG 60.694 66.667 0.00 0.00 0.00 5.40
185 186 2.914289 GAGCTGAGGTGGATGGGG 59.086 66.667 0.00 0.00 0.00 4.96
186 187 2.303549 GACGAGCTGAGGTGGATGGG 62.304 65.000 0.00 0.00 0.00 4.00
187 188 1.142748 GACGAGCTGAGGTGGATGG 59.857 63.158 0.00 0.00 0.00 3.51
188 189 0.247460 TTGACGAGCTGAGGTGGATG 59.753 55.000 0.00 0.00 0.00 3.51
189 190 0.534412 CTTGACGAGCTGAGGTGGAT 59.466 55.000 0.00 0.00 0.00 3.41
190 191 0.827925 ACTTGACGAGCTGAGGTGGA 60.828 55.000 0.00 0.00 0.00 4.02
191 192 0.888619 TACTTGACGAGCTGAGGTGG 59.111 55.000 0.00 0.00 0.00 4.61
192 193 1.542030 ACTACTTGACGAGCTGAGGTG 59.458 52.381 0.00 0.00 0.00 4.00
193 194 1.542030 CACTACTTGACGAGCTGAGGT 59.458 52.381 0.00 0.00 0.00 3.85
194 195 1.813178 TCACTACTTGACGAGCTGAGG 59.187 52.381 0.00 0.00 0.00 3.86
195 196 2.857618 GTCACTACTTGACGAGCTGAG 58.142 52.381 0.00 0.00 45.33 3.35
196 197 2.991434 GTCACTACTTGACGAGCTGA 57.009 50.000 0.00 0.00 45.33 4.26
206 207 6.622549 CGAAGACTAATCCAAGTCACTACTT 58.377 40.000 6.76 0.00 46.89 2.24
207 208 5.393243 GCGAAGACTAATCCAAGTCACTACT 60.393 44.000 6.76 0.00 46.89 2.57
208 209 4.799428 GCGAAGACTAATCCAAGTCACTAC 59.201 45.833 6.76 0.00 46.89 2.73
209 210 4.142227 GGCGAAGACTAATCCAAGTCACTA 60.142 45.833 6.76 0.00 46.89 2.74
210 211 3.368531 GGCGAAGACTAATCCAAGTCACT 60.369 47.826 6.76 0.00 46.89 3.41
211 212 2.930682 GGCGAAGACTAATCCAAGTCAC 59.069 50.000 6.76 0.40 46.89 3.67
212 213 2.565391 TGGCGAAGACTAATCCAAGTCA 59.435 45.455 6.76 0.00 46.89 3.41
213 214 2.930682 GTGGCGAAGACTAATCCAAGTC 59.069 50.000 0.00 0.00 45.20 3.01
214 215 2.674177 CGTGGCGAAGACTAATCCAAGT 60.674 50.000 0.00 0.00 34.59 3.16
215 216 1.927174 CGTGGCGAAGACTAATCCAAG 59.073 52.381 0.00 0.00 34.59 3.61
216 217 1.274167 ACGTGGCGAAGACTAATCCAA 59.726 47.619 0.00 0.00 34.59 3.53
217 218 0.892755 ACGTGGCGAAGACTAATCCA 59.107 50.000 0.00 0.00 34.59 3.41
218 219 1.135199 TGACGTGGCGAAGACTAATCC 60.135 52.381 0.00 0.00 34.59 3.01
219 220 2.186076 CTGACGTGGCGAAGACTAATC 58.814 52.381 0.00 0.00 34.59 1.75
220 221 1.736032 GCTGACGTGGCGAAGACTAAT 60.736 52.381 0.00 0.00 34.59 1.73
221 222 0.388134 GCTGACGTGGCGAAGACTAA 60.388 55.000 0.00 0.00 34.59 2.24
222 223 1.211969 GCTGACGTGGCGAAGACTA 59.788 57.895 0.00 0.00 34.59 2.59
223 224 2.049063 GCTGACGTGGCGAAGACT 60.049 61.111 0.00 0.00 34.59 3.24
224 225 3.112709 GGCTGACGTGGCGAAGAC 61.113 66.667 0.00 0.00 0.00 3.01
225 226 4.373116 GGGCTGACGTGGCGAAGA 62.373 66.667 0.00 0.00 0.00 2.87
236 237 3.075005 GCCTACCTGTCGGGCTGA 61.075 66.667 0.00 0.00 42.31 4.26
237 238 4.162690 GGCCTACCTGTCGGGCTG 62.163 72.222 7.10 0.00 44.70 4.85
240 241 3.006728 TTGGGCCTACCTGTCGGG 61.007 66.667 4.53 0.00 41.11 5.14
241 242 1.838073 AAGTTGGGCCTACCTGTCGG 61.838 60.000 14.63 0.00 41.11 4.79
242 243 0.673644 CAAGTTGGGCCTACCTGTCG 60.674 60.000 14.63 0.00 41.11 4.35
243 244 0.400594 ACAAGTTGGGCCTACCTGTC 59.599 55.000 15.30 0.00 41.11 3.51
244 245 0.850784 AACAAGTTGGGCCTACCTGT 59.149 50.000 15.30 15.30 41.11 4.00
245 246 2.039879 ACTAACAAGTTGGGCCTACCTG 59.960 50.000 14.63 14.32 41.11 4.00
246 247 2.345560 ACTAACAAGTTGGGCCTACCT 58.654 47.619 14.63 0.00 41.11 3.08
247 248 2.873094 ACTAACAAGTTGGGCCTACC 57.127 50.000 14.63 0.00 40.81 3.18
248 249 4.794981 GCAAAACTAACAAGTTGGGCCTAC 60.795 45.833 10.30 10.30 31.64 3.18
249 250 3.319689 GCAAAACTAACAAGTTGGGCCTA 59.680 43.478 4.53 0.00 31.64 3.93
250 251 2.102420 GCAAAACTAACAAGTTGGGCCT 59.898 45.455 4.53 0.00 31.64 5.19
251 252 2.102420 AGCAAAACTAACAAGTTGGGCC 59.898 45.455 7.96 0.00 34.36 5.80
252 253 3.123050 CAGCAAAACTAACAAGTTGGGC 58.877 45.455 7.96 6.39 34.18 5.36
253 254 4.385358 ACAGCAAAACTAACAAGTTGGG 57.615 40.909 7.96 0.00 31.64 4.12
254 255 6.453659 CGAAAACAGCAAAACTAACAAGTTGG 60.454 38.462 7.96 0.00 31.64 3.77
255 256 6.457676 CGAAAACAGCAAAACTAACAAGTTG 58.542 36.000 0.00 0.00 31.64 3.16
256 257 5.061684 GCGAAAACAGCAAAACTAACAAGTT 59.938 36.000 0.00 0.00 34.19 2.66
257 258 4.561213 GCGAAAACAGCAAAACTAACAAGT 59.439 37.500 0.00 0.00 34.19 3.16
258 259 4.560819 TGCGAAAACAGCAAAACTAACAAG 59.439 37.500 0.00 0.00 42.18 3.16
259 260 4.486090 TGCGAAAACAGCAAAACTAACAA 58.514 34.783 0.00 0.00 42.18 2.83
260 261 4.098055 TGCGAAAACAGCAAAACTAACA 57.902 36.364 0.00 0.00 42.18 2.41
269 270 2.126467 GATTTGCTTGCGAAAACAGCA 58.874 42.857 0.00 0.00 43.59 4.41
270 271 2.126467 TGATTTGCTTGCGAAAACAGC 58.874 42.857 0.00 0.00 0.00 4.40
271 272 3.631144 TCTGATTTGCTTGCGAAAACAG 58.369 40.909 18.09 18.09 35.57 3.16
272 273 3.706802 TCTGATTTGCTTGCGAAAACA 57.293 38.095 0.00 3.31 0.00 2.83
273 274 4.229096 TCATCTGATTTGCTTGCGAAAAC 58.771 39.130 0.00 0.00 0.00 2.43
274 275 4.502171 TCATCTGATTTGCTTGCGAAAA 57.498 36.364 0.00 0.00 0.00 2.29
275 276 4.156373 TGATCATCTGATTTGCTTGCGAAA 59.844 37.500 0.00 0.00 34.37 3.46
276 277 3.690628 TGATCATCTGATTTGCTTGCGAA 59.309 39.130 0.00 0.00 34.37 4.70
277 278 3.272581 TGATCATCTGATTTGCTTGCGA 58.727 40.909 0.00 0.00 34.37 5.10
278 279 3.064958 ACTGATCATCTGATTTGCTTGCG 59.935 43.478 0.00 0.00 34.37 4.85
279 280 4.634184 ACTGATCATCTGATTTGCTTGC 57.366 40.909 0.00 0.00 34.37 4.01
280 281 6.762187 AGAGTACTGATCATCTGATTTGCTTG 59.238 38.462 0.00 0.00 34.37 4.01
281 282 6.887013 AGAGTACTGATCATCTGATTTGCTT 58.113 36.000 0.00 0.00 34.37 3.91
282 283 6.324512 AGAGAGTACTGATCATCTGATTTGCT 59.675 38.462 0.00 0.00 34.37 3.91
283 284 6.421501 CAGAGAGTACTGATCATCTGATTTGC 59.578 42.308 14.04 0.00 39.94 3.68
284 285 7.490840 ACAGAGAGTACTGATCATCTGATTTG 58.509 38.462 22.47 9.43 40.63 2.32
285 286 7.658525 ACAGAGAGTACTGATCATCTGATTT 57.341 36.000 22.47 3.93 40.63 2.17
286 287 7.658525 AACAGAGAGTACTGATCATCTGATT 57.341 36.000 22.47 12.92 40.63 2.57
287 288 7.041440 CGTAACAGAGAGTACTGATCATCTGAT 60.041 40.741 22.47 15.64 40.63 2.90
288 289 6.258947 CGTAACAGAGAGTACTGATCATCTGA 59.741 42.308 22.47 4.51 40.63 3.27
289 290 6.426327 CGTAACAGAGAGTACTGATCATCTG 58.574 44.000 16.58 16.58 40.63 2.90
290 291 5.529430 CCGTAACAGAGAGTACTGATCATCT 59.471 44.000 0.00 0.00 40.63 2.90
291 292 5.527951 TCCGTAACAGAGAGTACTGATCATC 59.472 44.000 0.00 0.00 40.63 2.92
292 293 5.297278 GTCCGTAACAGAGAGTACTGATCAT 59.703 44.000 0.00 0.00 40.63 2.45
293 294 4.634883 GTCCGTAACAGAGAGTACTGATCA 59.365 45.833 0.00 0.00 40.63 2.92
294 295 4.877251 AGTCCGTAACAGAGAGTACTGATC 59.123 45.833 0.00 0.00 40.63 2.92
295 296 4.846040 AGTCCGTAACAGAGAGTACTGAT 58.154 43.478 0.00 0.00 40.63 2.90
296 297 4.283363 AGTCCGTAACAGAGAGTACTGA 57.717 45.455 0.00 0.00 40.63 3.41
297 298 4.571580 CCTAGTCCGTAACAGAGAGTACTG 59.428 50.000 0.00 0.00 42.78 2.74
298 299 4.768583 CCTAGTCCGTAACAGAGAGTACT 58.231 47.826 0.00 0.00 0.00 2.73
299 300 3.312146 GCCTAGTCCGTAACAGAGAGTAC 59.688 52.174 0.00 0.00 0.00 2.73
300 301 3.539604 GCCTAGTCCGTAACAGAGAGTA 58.460 50.000 0.00 0.00 0.00 2.59
301 302 2.367486 GCCTAGTCCGTAACAGAGAGT 58.633 52.381 0.00 0.00 0.00 3.24
302 303 1.331138 CGCCTAGTCCGTAACAGAGAG 59.669 57.143 0.00 0.00 0.00 3.20
303 304 1.376543 CGCCTAGTCCGTAACAGAGA 58.623 55.000 0.00 0.00 0.00 3.10
304 305 0.248539 GCGCCTAGTCCGTAACAGAG 60.249 60.000 0.00 0.00 0.00 3.35
305 306 0.961857 TGCGCCTAGTCCGTAACAGA 60.962 55.000 4.18 0.00 0.00 3.41
306 307 0.102481 ATGCGCCTAGTCCGTAACAG 59.898 55.000 4.18 0.00 0.00 3.16
307 308 0.533491 AATGCGCCTAGTCCGTAACA 59.467 50.000 4.18 0.00 0.00 2.41
308 309 1.648504 AAATGCGCCTAGTCCGTAAC 58.351 50.000 4.18 0.00 0.00 2.50
309 310 2.273557 GAAAATGCGCCTAGTCCGTAA 58.726 47.619 4.18 0.00 0.00 3.18
310 311 1.205179 TGAAAATGCGCCTAGTCCGTA 59.795 47.619 4.18 0.00 0.00 4.02
311 312 0.036765 TGAAAATGCGCCTAGTCCGT 60.037 50.000 4.18 0.00 0.00 4.69
312 313 1.083489 TTGAAAATGCGCCTAGTCCG 58.917 50.000 4.18 0.00 0.00 4.79
313 314 2.945668 AGATTGAAAATGCGCCTAGTCC 59.054 45.455 4.18 0.00 0.00 3.85
314 315 4.622701 AAGATTGAAAATGCGCCTAGTC 57.377 40.909 4.18 0.00 0.00 2.59
315 316 5.391312 AAAAGATTGAAAATGCGCCTAGT 57.609 34.783 4.18 0.00 0.00 2.57
316 317 5.634859 ACAAAAAGATTGAAAATGCGCCTAG 59.365 36.000 4.18 0.00 0.00 3.02
317 318 5.404968 CACAAAAAGATTGAAAATGCGCCTA 59.595 36.000 4.18 0.00 0.00 3.93
318 319 4.211794 CACAAAAAGATTGAAAATGCGCCT 59.788 37.500 4.18 0.00 0.00 5.52
319 320 4.456914 CACAAAAAGATTGAAAATGCGCC 58.543 39.130 4.18 0.00 0.00 6.53
320 321 3.901877 GCACAAAAAGATTGAAAATGCGC 59.098 39.130 0.00 0.00 0.00 6.09
321 322 4.456914 GGCACAAAAAGATTGAAAATGCG 58.543 39.130 0.00 0.00 0.00 4.73
322 323 4.516321 AGGGCACAAAAAGATTGAAAATGC 59.484 37.500 0.00 0.00 0.00 3.56
323 324 5.759273 TCAGGGCACAAAAAGATTGAAAATG 59.241 36.000 0.00 0.00 0.00 2.32
324 325 5.759763 GTCAGGGCACAAAAAGATTGAAAAT 59.240 36.000 0.00 0.00 0.00 1.82
325 326 5.104982 AGTCAGGGCACAAAAAGATTGAAAA 60.105 36.000 0.00 0.00 0.00 2.29
326 327 4.405358 AGTCAGGGCACAAAAAGATTGAAA 59.595 37.500 0.00 0.00 0.00 2.69
327 328 3.960102 AGTCAGGGCACAAAAAGATTGAA 59.040 39.130 0.00 0.00 0.00 2.69
328 329 3.565307 AGTCAGGGCACAAAAAGATTGA 58.435 40.909 0.00 0.00 0.00 2.57
329 330 5.452078 TTAGTCAGGGCACAAAAAGATTG 57.548 39.130 0.00 0.00 0.00 2.67
330 331 6.478512 TTTTAGTCAGGGCACAAAAAGATT 57.521 33.333 0.00 0.00 0.00 2.40
331 332 6.670695 ATTTTAGTCAGGGCACAAAAAGAT 57.329 33.333 0.00 0.00 0.00 2.40
332 333 6.478512 AATTTTAGTCAGGGCACAAAAAGA 57.521 33.333 0.00 0.00 0.00 2.52
333 334 6.760770 TCAAATTTTAGTCAGGGCACAAAAAG 59.239 34.615 0.00 0.00 0.00 2.27
334 335 6.644347 TCAAATTTTAGTCAGGGCACAAAAA 58.356 32.000 0.00 0.00 0.00 1.94
335 336 6.227298 TCAAATTTTAGTCAGGGCACAAAA 57.773 33.333 0.00 0.00 0.00 2.44
336 337 5.860941 TCAAATTTTAGTCAGGGCACAAA 57.139 34.783 0.00 0.00 0.00 2.83
337 338 6.071616 GGTATCAAATTTTAGTCAGGGCACAA 60.072 38.462 0.00 0.00 0.00 3.33
338 339 5.417580 GGTATCAAATTTTAGTCAGGGCACA 59.582 40.000 0.00 0.00 0.00 4.57
339 340 5.417580 TGGTATCAAATTTTAGTCAGGGCAC 59.582 40.000 0.00 0.00 0.00 5.01
340 341 5.575157 TGGTATCAAATTTTAGTCAGGGCA 58.425 37.500 0.00 0.00 0.00 5.36
341 342 6.152831 ACTTGGTATCAAATTTTAGTCAGGGC 59.847 38.462 0.00 0.00 31.77 5.19
342 343 7.703058 ACTTGGTATCAAATTTTAGTCAGGG 57.297 36.000 0.00 0.00 31.77 4.45
360 361 9.847224 CACTTAGGGTTATGATAATAACTTGGT 57.153 33.333 11.96 3.49 37.23 3.67
361 362 8.784043 GCACTTAGGGTTATGATAATAACTTGG 58.216 37.037 11.96 3.01 37.23 3.61
362 363 8.495949 CGCACTTAGGGTTATGATAATAACTTG 58.504 37.037 11.96 3.23 37.23 3.16
363 364 7.660208 CCGCACTTAGGGTTATGATAATAACTT 59.340 37.037 11.96 4.84 37.23 2.66
364 365 7.159372 CCGCACTTAGGGTTATGATAATAACT 58.841 38.462 11.96 0.00 37.23 2.24
365 366 6.932960 ACCGCACTTAGGGTTATGATAATAAC 59.067 38.462 4.51 4.51 36.54 1.89
366 367 6.932400 CACCGCACTTAGGGTTATGATAATAA 59.068 38.462 0.00 0.00 33.23 1.40
367 368 6.268158 TCACCGCACTTAGGGTTATGATAATA 59.732 38.462 0.00 0.00 33.23 0.98
368 369 5.071250 TCACCGCACTTAGGGTTATGATAAT 59.929 40.000 0.00 0.00 33.23 1.28
369 370 4.406326 TCACCGCACTTAGGGTTATGATAA 59.594 41.667 0.00 0.00 33.23 1.75
370 371 3.962063 TCACCGCACTTAGGGTTATGATA 59.038 43.478 0.00 0.00 33.23 2.15
371 372 2.769663 TCACCGCACTTAGGGTTATGAT 59.230 45.455 0.00 0.00 33.23 2.45
372 373 2.181125 TCACCGCACTTAGGGTTATGA 58.819 47.619 0.00 0.00 33.23 2.15
373 374 2.684001 TCACCGCACTTAGGGTTATG 57.316 50.000 0.00 0.00 33.23 1.90
374 375 3.926058 AATCACCGCACTTAGGGTTAT 57.074 42.857 0.00 0.00 33.23 1.89
375 376 3.706600 AAATCACCGCACTTAGGGTTA 57.293 42.857 0.00 0.00 33.23 2.85
376 377 2.579410 AAATCACCGCACTTAGGGTT 57.421 45.000 0.00 0.00 33.23 4.11
377 378 2.579410 AAAATCACCGCACTTAGGGT 57.421 45.000 0.00 0.00 36.87 4.34
378 379 3.869065 TCTAAAATCACCGCACTTAGGG 58.131 45.455 0.00 0.00 0.00 3.53
379 380 7.548196 TTTATCTAAAATCACCGCACTTAGG 57.452 36.000 0.00 0.00 0.00 2.69
382 383 9.174166 AGTTATTTATCTAAAATCACCGCACTT 57.826 29.630 0.00 0.00 0.00 3.16
383 384 8.732746 AGTTATTTATCTAAAATCACCGCACT 57.267 30.769 0.00 0.00 0.00 4.40
384 385 8.827677 AGAGTTATTTATCTAAAATCACCGCAC 58.172 33.333 0.00 0.00 0.00 5.34
385 386 8.958119 AGAGTTATTTATCTAAAATCACCGCA 57.042 30.769 0.00 0.00 0.00 5.69
386 387 8.496751 GGAGAGTTATTTATCTAAAATCACCGC 58.503 37.037 0.00 0.00 0.00 5.68
387 388 9.765795 AGGAGAGTTATTTATCTAAAATCACCG 57.234 33.333 0.00 0.00 0.00 4.94
396 397 9.661954 ACCATCTTCAGGAGAGTTATTTATCTA 57.338 33.333 0.00 0.00 37.93 1.98
397 398 8.428063 CACCATCTTCAGGAGAGTTATTTATCT 58.572 37.037 0.00 0.00 37.93 1.98
398 399 7.659390 CCACCATCTTCAGGAGAGTTATTTATC 59.341 40.741 0.00 0.00 37.93 1.75
399 400 7.127955 ACCACCATCTTCAGGAGAGTTATTTAT 59.872 37.037 0.00 0.00 37.93 1.40
400 401 6.443849 ACCACCATCTTCAGGAGAGTTATTTA 59.556 38.462 0.00 0.00 37.93 1.40
401 402 5.251700 ACCACCATCTTCAGGAGAGTTATTT 59.748 40.000 0.00 0.00 37.93 1.40
402 403 4.785376 ACCACCATCTTCAGGAGAGTTATT 59.215 41.667 0.00 0.00 37.93 1.40
403 404 4.366267 ACCACCATCTTCAGGAGAGTTAT 58.634 43.478 0.00 0.00 37.93 1.89
404 405 3.769844 GACCACCATCTTCAGGAGAGTTA 59.230 47.826 0.00 0.00 37.93 2.24
405 406 2.569404 GACCACCATCTTCAGGAGAGTT 59.431 50.000 0.00 0.00 37.93 3.01
406 407 2.183679 GACCACCATCTTCAGGAGAGT 58.816 52.381 0.00 0.00 37.93 3.24
407 408 2.093764 GTGACCACCATCTTCAGGAGAG 60.094 54.545 0.00 0.00 37.93 3.20
408 409 1.902508 GTGACCACCATCTTCAGGAGA 59.097 52.381 0.00 0.00 39.13 3.71
409 410 2.393271 GTGACCACCATCTTCAGGAG 57.607 55.000 0.00 0.00 0.00 3.69
427 428 2.516888 CCTCCGTCACACCCTTGGT 61.517 63.158 0.00 0.00 35.62 3.67
428 429 2.347490 CCTCCGTCACACCCTTGG 59.653 66.667 0.00 0.00 0.00 3.61
429 430 2.358737 GCCTCCGTCACACCCTTG 60.359 66.667 0.00 0.00 0.00 3.61
430 431 4.003788 CGCCTCCGTCACACCCTT 62.004 66.667 0.00 0.00 0.00 3.95
434 435 4.980805 TTGCCGCCTCCGTCACAC 62.981 66.667 0.00 0.00 0.00 3.82
435 436 4.680237 CTTGCCGCCTCCGTCACA 62.680 66.667 0.00 0.00 0.00 3.58
436 437 4.373116 TCTTGCCGCCTCCGTCAC 62.373 66.667 0.00 0.00 0.00 3.67
437 438 4.069232 CTCTTGCCGCCTCCGTCA 62.069 66.667 0.00 0.00 0.00 4.35
438 439 4.070552 ACTCTTGCCGCCTCCGTC 62.071 66.667 0.00 0.00 0.00 4.79
439 440 4.379243 CACTCTTGCCGCCTCCGT 62.379 66.667 0.00 0.00 0.00 4.69
442 443 2.521958 TTAGCCACTCTTGCCGCCTC 62.522 60.000 0.00 0.00 0.00 4.70
443 444 2.592993 TTAGCCACTCTTGCCGCCT 61.593 57.895 0.00 0.00 0.00 5.52
444 445 2.046314 TTAGCCACTCTTGCCGCC 60.046 61.111 0.00 0.00 0.00 6.13
445 446 2.740714 CGTTAGCCACTCTTGCCGC 61.741 63.158 0.00 0.00 0.00 6.53
446 447 1.374252 ACGTTAGCCACTCTTGCCG 60.374 57.895 0.00 0.00 0.00 5.69
447 448 1.298859 CCACGTTAGCCACTCTTGCC 61.299 60.000 0.00 0.00 0.00 4.52
448 449 0.320421 TCCACGTTAGCCACTCTTGC 60.320 55.000 0.00 0.00 0.00 4.01
449 450 2.271800 GATCCACGTTAGCCACTCTTG 58.728 52.381 0.00 0.00 0.00 3.02
450 451 1.899814 TGATCCACGTTAGCCACTCTT 59.100 47.619 0.00 0.00 0.00 2.85
451 452 1.478510 CTGATCCACGTTAGCCACTCT 59.521 52.381 0.00 0.00 0.00 3.24
452 453 1.476891 TCTGATCCACGTTAGCCACTC 59.523 52.381 0.00 0.00 0.00 3.51
453 454 1.557099 TCTGATCCACGTTAGCCACT 58.443 50.000 0.00 0.00 0.00 4.00
454 455 2.271800 CTTCTGATCCACGTTAGCCAC 58.728 52.381 0.00 0.00 0.00 5.01
455 456 1.899814 ACTTCTGATCCACGTTAGCCA 59.100 47.619 0.00 0.00 0.00 4.75
456 457 2.674796 ACTTCTGATCCACGTTAGCC 57.325 50.000 0.00 0.00 0.00 3.93
457 458 5.402867 GCTTATACTTCTGATCCACGTTAGC 59.597 44.000 0.00 0.00 0.00 3.09
458 459 6.504398 TGCTTATACTTCTGATCCACGTTAG 58.496 40.000 0.00 0.00 0.00 2.34
459 460 6.459670 TGCTTATACTTCTGATCCACGTTA 57.540 37.500 0.00 0.00 0.00 3.18
460 461 5.339008 TGCTTATACTTCTGATCCACGTT 57.661 39.130 0.00 0.00 0.00 3.99
461 462 5.303078 AGATGCTTATACTTCTGATCCACGT 59.697 40.000 0.00 0.00 0.00 4.49
462 463 5.632764 CAGATGCTTATACTTCTGATCCACG 59.367 44.000 2.24 0.00 41.84 4.94
463 464 5.931146 CCAGATGCTTATACTTCTGATCCAC 59.069 44.000 8.51 0.00 41.84 4.02
464 465 5.604231 ACCAGATGCTTATACTTCTGATCCA 59.396 40.000 8.51 0.00 41.84 3.41
465 466 5.931146 CACCAGATGCTTATACTTCTGATCC 59.069 44.000 8.51 0.00 41.84 3.36
466 467 6.520272 ACACCAGATGCTTATACTTCTGATC 58.480 40.000 8.51 0.00 41.84 2.92
467 468 6.098838 TGACACCAGATGCTTATACTTCTGAT 59.901 38.462 8.51 0.00 41.84 2.90
468 469 5.422012 TGACACCAGATGCTTATACTTCTGA 59.578 40.000 8.51 0.00 41.84 3.27
469 470 5.521735 GTGACACCAGATGCTTATACTTCTG 59.478 44.000 0.00 0.00 40.02 3.02
470 471 5.187772 TGTGACACCAGATGCTTATACTTCT 59.812 40.000 2.45 0.00 0.00 2.85
471 472 5.419542 TGTGACACCAGATGCTTATACTTC 58.580 41.667 2.45 0.00 0.00 3.01
472 473 5.420725 TGTGACACCAGATGCTTATACTT 57.579 39.130 2.45 0.00 0.00 2.24
473 474 5.129320 TCATGTGACACCAGATGCTTATACT 59.871 40.000 2.45 0.00 42.05 2.12
474 475 5.235186 GTCATGTGACACCAGATGCTTATAC 59.765 44.000 8.22 0.00 42.05 1.47
475 476 5.359756 GTCATGTGACACCAGATGCTTATA 58.640 41.667 8.22 0.00 42.05 0.98
476 477 4.194640 GTCATGTGACACCAGATGCTTAT 58.805 43.478 8.22 0.00 42.05 1.73
477 478 3.599343 GTCATGTGACACCAGATGCTTA 58.401 45.455 8.22 0.00 42.05 3.09
478 479 2.430465 GTCATGTGACACCAGATGCTT 58.570 47.619 8.22 0.00 42.05 3.91
479 480 1.339438 GGTCATGTGACACCAGATGCT 60.339 52.381 14.47 0.00 46.47 3.79
480 481 1.089920 GGTCATGTGACACCAGATGC 58.910 55.000 14.47 0.00 46.47 3.91
481 482 2.477845 TGGTCATGTGACACCAGATG 57.522 50.000 14.47 0.57 46.47 2.90
485 486 0.250424 CTGCTGGTCATGTGACACCA 60.250 55.000 14.47 4.12 46.47 4.17
486 487 0.250467 ACTGCTGGTCATGTGACACC 60.250 55.000 14.47 0.18 46.47 4.16
487 488 1.532868 GAACTGCTGGTCATGTGACAC 59.467 52.381 14.47 0.00 46.47 3.67
488 489 1.140652 TGAACTGCTGGTCATGTGACA 59.859 47.619 7.31 0.00 46.47 3.58
489 490 1.882912 TGAACTGCTGGTCATGTGAC 58.117 50.000 7.31 4.58 44.04 3.67
490 491 2.429478 CATGAACTGCTGGTCATGTGA 58.571 47.619 32.30 5.85 36.26 3.58
491 492 2.913777 CATGAACTGCTGGTCATGTG 57.086 50.000 32.30 17.64 36.26 3.21
511 512 4.127907 ACTCAGATCAGTATGCATTGCTG 58.872 43.478 19.06 19.06 34.76 4.41
512 513 4.101274 AGACTCAGATCAGTATGCATTGCT 59.899 41.667 3.54 0.40 34.76 3.91
513 514 4.211584 CAGACTCAGATCAGTATGCATTGC 59.788 45.833 3.54 0.46 34.76 3.56
514 515 5.462729 GTCAGACTCAGATCAGTATGCATTG 59.537 44.000 3.54 0.00 35.87 2.82
515 516 5.599732 GTCAGACTCAGATCAGTATGCATT 58.400 41.667 3.54 0.00 35.87 3.56
516 517 4.261530 CGTCAGACTCAGATCAGTATGCAT 60.262 45.833 3.79 3.79 35.87 3.96
517 518 3.065925 CGTCAGACTCAGATCAGTATGCA 59.934 47.826 0.00 0.00 35.87 3.96
518 519 3.066064 ACGTCAGACTCAGATCAGTATGC 59.934 47.826 0.00 0.00 35.87 3.14
519 520 4.596097 CACGTCAGACTCAGATCAGTATG 58.404 47.826 0.00 0.00 37.02 2.39
520 521 3.066064 GCACGTCAGACTCAGATCAGTAT 59.934 47.826 0.00 0.00 0.00 2.12
521 522 2.420372 GCACGTCAGACTCAGATCAGTA 59.580 50.000 0.00 0.00 0.00 2.74
522 523 1.201181 GCACGTCAGACTCAGATCAGT 59.799 52.381 0.00 0.00 0.00 3.41
523 524 1.472082 AGCACGTCAGACTCAGATCAG 59.528 52.381 0.00 0.00 0.00 2.90
524 525 1.470494 GAGCACGTCAGACTCAGATCA 59.530 52.381 0.00 0.00 0.00 2.92
525 526 1.742831 AGAGCACGTCAGACTCAGATC 59.257 52.381 0.00 0.00 32.71 2.75
526 527 1.832883 AGAGCACGTCAGACTCAGAT 58.167 50.000 0.00 0.00 32.71 2.90
527 528 1.537638 GAAGAGCACGTCAGACTCAGA 59.462 52.381 0.00 0.00 32.71 3.27
528 529 1.402194 GGAAGAGCACGTCAGACTCAG 60.402 57.143 0.00 0.00 32.71 3.35
529 530 0.598562 GGAAGAGCACGTCAGACTCA 59.401 55.000 0.00 0.00 32.71 3.41
530 531 0.598562 TGGAAGAGCACGTCAGACTC 59.401 55.000 0.00 0.00 0.00 3.36
531 532 0.600557 CTGGAAGAGCACGTCAGACT 59.399 55.000 0.00 0.00 34.07 3.24
532 533 0.315568 ACTGGAAGAGCACGTCAGAC 59.684 55.000 5.30 0.00 37.43 3.51
533 534 0.315251 CACTGGAAGAGCACGTCAGA 59.685 55.000 5.30 0.00 37.43 3.27
534 535 0.032678 ACACTGGAAGAGCACGTCAG 59.967 55.000 0.00 0.00 37.43 3.51
535 536 0.464036 AACACTGGAAGAGCACGTCA 59.536 50.000 0.00 0.00 37.43 4.35
536 537 2.433868 TAACACTGGAAGAGCACGTC 57.566 50.000 0.00 0.00 37.43 4.34
537 538 2.353803 GGATAACACTGGAAGAGCACGT 60.354 50.000 0.00 0.00 37.43 4.49
538 539 2.271800 GGATAACACTGGAAGAGCACG 58.728 52.381 0.00 0.00 37.43 5.34
539 540 3.265791 CTGGATAACACTGGAAGAGCAC 58.734 50.000 0.00 0.00 37.43 4.40
540 541 2.237143 CCTGGATAACACTGGAAGAGCA 59.763 50.000 0.00 0.00 37.43 4.26
541 542 2.420687 CCCTGGATAACACTGGAAGAGC 60.421 54.545 0.00 0.00 37.43 4.09
542 543 2.420687 GCCCTGGATAACACTGGAAGAG 60.421 54.545 0.00 0.00 37.43 2.85
543 544 1.559682 GCCCTGGATAACACTGGAAGA 59.440 52.381 0.00 0.00 37.43 2.87
544 545 1.408822 GGCCCTGGATAACACTGGAAG 60.409 57.143 0.00 0.00 42.29 3.46
545 546 0.623723 GGCCCTGGATAACACTGGAA 59.376 55.000 0.00 0.00 0.00 3.53
546 547 0.548926 TGGCCCTGGATAACACTGGA 60.549 55.000 0.00 0.00 0.00 3.86
547 548 0.331278 TTGGCCCTGGATAACACTGG 59.669 55.000 0.00 0.00 0.00 4.00
548 549 1.281867 TCTTGGCCCTGGATAACACTG 59.718 52.381 0.00 0.00 0.00 3.66
549 550 1.668826 TCTTGGCCCTGGATAACACT 58.331 50.000 0.00 0.00 0.00 3.55
550 551 2.507407 TTCTTGGCCCTGGATAACAC 57.493 50.000 0.00 0.00 0.00 3.32
551 552 2.358090 CCATTCTTGGCCCTGGATAACA 60.358 50.000 0.00 0.00 35.85 2.41
552 553 2.310538 CCATTCTTGGCCCTGGATAAC 58.689 52.381 0.00 0.00 35.85 1.89
553 554 2.754012 CCATTCTTGGCCCTGGATAA 57.246 50.000 0.00 0.00 35.85 1.75
564 565 0.877071 AAGTCAGCGCACCATTCTTG 59.123 50.000 11.47 0.00 0.00 3.02
565 566 0.877071 CAAGTCAGCGCACCATTCTT 59.123 50.000 11.47 2.30 0.00 2.52
566 567 0.035317 TCAAGTCAGCGCACCATTCT 59.965 50.000 11.47 0.00 0.00 2.40
567 568 0.874390 TTCAAGTCAGCGCACCATTC 59.126 50.000 11.47 0.00 0.00 2.67
568 569 0.877071 CTTCAAGTCAGCGCACCATT 59.123 50.000 11.47 0.00 0.00 3.16
569 570 0.957395 CCTTCAAGTCAGCGCACCAT 60.957 55.000 11.47 0.00 0.00 3.55
570 571 1.597854 CCTTCAAGTCAGCGCACCA 60.598 57.895 11.47 0.00 0.00 4.17
571 572 1.166531 AACCTTCAAGTCAGCGCACC 61.167 55.000 11.47 0.00 0.00 5.01
572 573 0.663153 AAACCTTCAAGTCAGCGCAC 59.337 50.000 11.47 0.00 0.00 5.34
573 574 1.333619 GAAAACCTTCAAGTCAGCGCA 59.666 47.619 11.47 0.00 0.00 6.09
574 575 1.335051 GGAAAACCTTCAAGTCAGCGC 60.335 52.381 0.00 0.00 32.75 5.92
575 576 1.069906 CGGAAAACCTTCAAGTCAGCG 60.070 52.381 0.00 0.00 32.75 5.18
576 577 1.335051 GCGGAAAACCTTCAAGTCAGC 60.335 52.381 0.00 0.00 32.75 4.26
577 578 1.946768 TGCGGAAAACCTTCAAGTCAG 59.053 47.619 0.00 0.00 32.75 3.51
578 579 2.045561 TGCGGAAAACCTTCAAGTCA 57.954 45.000 0.00 0.00 32.75 3.41
579 580 2.922335 GCATGCGGAAAACCTTCAAGTC 60.922 50.000 0.00 0.00 32.75 3.01
580 581 1.000274 GCATGCGGAAAACCTTCAAGT 60.000 47.619 0.00 0.00 32.75 3.16
581 582 1.000385 TGCATGCGGAAAACCTTCAAG 60.000 47.619 14.09 0.00 32.75 3.02
582 583 1.035923 TGCATGCGGAAAACCTTCAA 58.964 45.000 14.09 0.00 32.75 2.69
583 584 0.313672 GTGCATGCGGAAAACCTTCA 59.686 50.000 14.09 0.00 32.75 3.02
584 585 0.729140 CGTGCATGCGGAAAACCTTC 60.729 55.000 14.09 0.00 0.00 3.46
585 586 1.285641 CGTGCATGCGGAAAACCTT 59.714 52.632 14.09 0.00 0.00 3.50
586 587 2.953821 CGTGCATGCGGAAAACCT 59.046 55.556 14.09 0.00 0.00 3.50
595 596 1.097547 AGATTACAGCCCGTGCATGC 61.098 55.000 11.82 11.82 41.13 4.06
610 611 3.446516 GGAAAGATGCCAAGCTGAAGATT 59.553 43.478 0.00 0.00 0.00 2.40
612 613 2.040813 AGGAAAGATGCCAAGCTGAAGA 59.959 45.455 0.00 0.00 0.00 2.87
613 614 2.163815 CAGGAAAGATGCCAAGCTGAAG 59.836 50.000 0.00 0.00 0.00 3.02
664 665 5.006746 GGAATCAACATGGTACGAAGATCAC 59.993 44.000 0.00 0.00 0.00 3.06
665 666 5.116180 GGAATCAACATGGTACGAAGATCA 58.884 41.667 0.00 0.00 0.00 2.92
666 667 5.006746 GTGGAATCAACATGGTACGAAGATC 59.993 44.000 0.00 0.00 0.00 2.75
667 668 4.876107 GTGGAATCAACATGGTACGAAGAT 59.124 41.667 0.00 0.00 0.00 2.40
668 669 4.250464 GTGGAATCAACATGGTACGAAGA 58.750 43.478 0.00 0.00 0.00 2.87
669 670 3.062099 CGTGGAATCAACATGGTACGAAG 59.938 47.826 0.00 0.00 32.58 3.79
670 671 2.997303 CGTGGAATCAACATGGTACGAA 59.003 45.455 0.00 0.00 32.58 3.85
683 684 3.458872 TGCATGGAGACGTGGAATC 57.541 52.632 0.00 0.00 45.38 2.52
716 766 2.126307 CGCCGCCGATAGATGGAG 60.126 66.667 0.00 0.00 36.29 3.86
761 830 3.170672 CGGGGCCAGATGGATGGA 61.171 66.667 4.39 0.00 43.57 3.41
837 909 2.480555 GTTGGCGCGAATCCACTG 59.519 61.111 12.10 0.00 32.45 3.66
994 1071 3.451894 GGCGGCCTCCATTGTTGG 61.452 66.667 12.87 0.00 45.15 3.77
1051 1128 1.383803 GGAGGAGTGGGAGGAGCAT 60.384 63.158 0.00 0.00 0.00 3.79
1062 1139 2.686835 GGGAGCAGCAGGAGGAGT 60.687 66.667 0.00 0.00 0.00 3.85
1224 1304 1.380650 GAAGCCGAGGGAGAGGACT 60.381 63.158 0.00 0.00 0.00 3.85
1227 1307 2.042435 AGGAAGCCGAGGGAGAGG 60.042 66.667 0.00 0.00 0.00 3.69
1231 1311 2.042843 GGAGAGGAAGCCGAGGGA 60.043 66.667 0.00 0.00 0.00 4.20
1576 1656 0.179205 GTGAGCAGCGAGAACATTGC 60.179 55.000 0.00 0.00 38.78 3.56
1578 1658 0.319900 ACGTGAGCAGCGAGAACATT 60.320 50.000 0.00 0.00 0.00 2.71
1852 1932 3.737182 CGTGTCGACGTAGCAGTG 58.263 61.111 11.62 0.00 40.91 3.66
1923 2003 3.823330 ACCATCTCGGCGTCGGTC 61.823 66.667 10.62 0.00 39.03 4.79
1926 2006 2.278206 CTCACCATCTCGGCGTCG 60.278 66.667 1.15 1.15 39.03 5.12
1992 2072 1.450848 CGCCATGATCCACTGCAGT 60.451 57.895 15.25 15.25 0.00 4.40
2025 2105 2.835431 CTCGCCTGGATCTCCGGT 60.835 66.667 0.00 0.00 40.86 5.28
2046 2126 2.792599 GCGTCGATCTCGTCCTGT 59.207 61.111 0.00 0.00 40.80 4.00
2048 2128 3.574445 CCGCGTCGATCTCGTCCT 61.574 66.667 4.92 0.00 40.80 3.85
2052 2132 4.668202 ATCGCCGCGTCGATCTCG 62.668 66.667 20.39 3.78 44.97 4.04
2074 2154 2.879462 GACGGCGTCATGGTCGTC 60.879 66.667 33.07 12.24 43.62 4.20
2268 2351 1.760875 GCCCCATACCTCCTCGTCA 60.761 63.158 0.00 0.00 0.00 4.35
2280 2363 4.765970 TCCTCTGGCTGGCCCCAT 62.766 66.667 9.28 0.00 33.64 4.00
2284 2367 2.270527 GAACTCCTCTGGCTGGCC 59.729 66.667 4.43 4.43 0.00 5.36
2361 2444 0.683973 ACGGCATCATCCTGATCTCC 59.316 55.000 0.00 0.00 34.28 3.71
2611 2694 7.392113 TGAATGTGGTATTAAGTTGTTACCCTG 59.608 37.037 11.48 0.00 35.53 4.45
2625 2708 3.245229 TGCCCTGACTTGAATGTGGTATT 60.245 43.478 0.00 0.00 0.00 1.89
2640 2723 3.448093 TGATGGTTTATTGTGCCCTGA 57.552 42.857 0.00 0.00 0.00 3.86
2651 2734 3.951775 AGGCGCATTTTTGATGGTTTA 57.048 38.095 10.83 0.00 0.00 2.01
2658 2741 6.195868 CGTTATGTATTAGGCGCATTTTTGA 58.804 36.000 10.83 0.00 0.00 2.69
2675 2758 2.201732 CATTAGTGCTCCGCGTTATGT 58.798 47.619 4.92 0.00 0.00 2.29
2692 2775 5.486735 TTTCATGACCAAATTCCAGCATT 57.513 34.783 0.00 0.00 0.00 3.56
2751 2834 1.835267 ACCTAGGCACACCACGTCA 60.835 57.895 9.30 0.00 39.06 4.35
2767 2850 2.288395 CCAACTCAGCAAATTGTCCACC 60.288 50.000 0.00 0.00 0.00 4.61
2790 2873 0.039472 CATTGACATGTGGGACCCCA 59.961 55.000 8.45 3.10 45.02 4.96
2801 2885 5.812642 GGATAAACACTCGAGTCATTGACAT 59.187 40.000 16.96 7.74 34.60 3.06
2841 2927 9.859427 TGTTGAAATGCCTATGAGAAAATAAAG 57.141 29.630 0.00 0.00 0.00 1.85
2879 2977 4.314440 GCCCCTGACAGACACGCA 62.314 66.667 3.32 0.00 0.00 5.24
2934 3032 3.470888 AGCTGTATCGGCCGGCTT 61.471 61.111 28.56 14.25 41.74 4.35
2951 3049 2.102438 CGAGCATCTTCTTGCCGCA 61.102 57.895 0.00 0.00 43.83 5.69
3032 3131 2.622436 GTCTTCCTGGCACTACATCAC 58.378 52.381 0.00 0.00 0.00 3.06
3033 3132 1.204704 CGTCTTCCTGGCACTACATCA 59.795 52.381 0.00 0.00 0.00 3.07
3039 3138 0.247736 GACATCGTCTTCCTGGCACT 59.752 55.000 0.00 0.00 0.00 4.40
3051 3150 2.485582 CGGCGAGTCTGACATCGT 59.514 61.111 21.66 0.35 40.97 3.73
3144 3243 2.865308 CTGTACAGCGTCCGTCGA 59.135 61.111 10.54 0.00 42.86 4.20
3155 3254 2.262603 CGCTGGAGCTGCTGTACA 59.737 61.111 7.01 2.27 39.32 2.90
3201 3300 2.280797 TAATGGAGGCGGATGCGC 60.281 61.111 24.55 24.55 44.10 6.09
3202 3301 2.320587 GCTAATGGAGGCGGATGCG 61.321 63.158 0.65 0.65 44.10 4.73
3203 3302 1.968540 GGCTAATGGAGGCGGATGC 60.969 63.158 0.00 0.00 41.55 3.91
3204 3303 4.386413 GGCTAATGGAGGCGGATG 57.614 61.111 0.00 0.00 41.55 3.51
3229 3338 3.511595 CGACTAGTGCGGGGCGTA 61.512 66.667 0.00 0.00 0.00 4.42
3256 3375 2.044946 GGGTGGCGGAAGAAGCAT 60.045 61.111 0.00 0.00 36.08 3.79
3270 3389 3.011517 CTAGTGGCTGGCCTGGGT 61.012 66.667 12.06 0.00 36.94 4.51
3271 3390 3.011517 ACTAGTGGCTGGCCTGGG 61.012 66.667 12.06 0.00 36.94 4.45
3272 3391 2.586792 GACTAGTGGCTGGCCTGG 59.413 66.667 12.06 1.66 36.94 4.45
3273 3392 2.185350 CGACTAGTGGCTGGCCTG 59.815 66.667 13.05 4.26 36.94 4.85
3274 3393 3.775654 GCGACTAGTGGCTGGCCT 61.776 66.667 21.25 2.65 36.94 5.19
3402 3521 1.454295 ATCAATGGCGGATGCAGCA 60.454 52.632 3.51 0.00 45.35 4.41
3403 3522 1.007734 CATCAATGGCGGATGCAGC 60.008 57.895 0.00 0.00 45.35 5.25
3404 3523 1.658114 CCATCAATGGCGGATGCAG 59.342 57.895 7.78 0.00 45.35 4.41
3415 3534 3.947612 ACTCAATCTGCCTCCATCAAT 57.052 42.857 0.00 0.00 0.00 2.57
3446 3565 0.249120 CTACCATCCGTGCTGAACCA 59.751 55.000 0.00 0.00 0.00 3.67
3449 3568 0.249120 CACCTACCATCCGTGCTGAA 59.751 55.000 0.00 0.00 0.00 3.02
3531 3650 0.392998 CCATAGCCATATCCCACGCC 60.393 60.000 0.00 0.00 0.00 5.68
3535 3654 0.324614 CGCACCATAGCCATATCCCA 59.675 55.000 0.00 0.00 0.00 4.37
3537 3656 0.324943 ACCGCACCATAGCCATATCC 59.675 55.000 0.00 0.00 0.00 2.59
3542 3661 3.043998 AAAAACCGCACCATAGCCA 57.956 47.368 0.00 0.00 0.00 4.75
3561 3680 3.587506 CCTCCTCCTTCCTCCTGTAAAAA 59.412 47.826 0.00 0.00 0.00 1.94
3573 3692 1.208706 CTTCTTCCCCCTCCTCCTTC 58.791 60.000 0.00 0.00 0.00 3.46
3577 3696 2.046292 CATCTCTTCTTCCCCCTCCTC 58.954 57.143 0.00 0.00 0.00 3.71
3578 3697 1.974197 GCATCTCTTCTTCCCCCTCCT 60.974 57.143 0.00 0.00 0.00 3.69
3579 3698 0.472044 GCATCTCTTCTTCCCCCTCC 59.528 60.000 0.00 0.00 0.00 4.30
3582 3701 1.773653 AGATGCATCTCTTCTTCCCCC 59.226 52.381 23.75 0.00 29.30 5.40
3618 3737 0.839946 ATAATTCGCTGAGGTGGCCT 59.160 50.000 3.32 0.00 36.03 5.19
3624 3743 4.248859 CCTATGTGGATAATTCGCTGAGG 58.751 47.826 0.00 0.00 38.35 3.86
3630 3749 2.744202 GCCTGCCTATGTGGATAATTCG 59.256 50.000 0.00 0.00 38.35 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.