Multiple sequence alignment - TraesCS2D01G548500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G548500 chr2D 100.000 3299 0 0 1 3299 624286540 624289838 0.000000e+00 6093
1 TraesCS2D01G548500 chr2D 97.989 2685 36 3 629 3299 547546097 547543417 0.000000e+00 4643
2 TraesCS2D01G548500 chr2D 97.989 2685 34 8 629 3299 489934893 489932215 0.000000e+00 4641
3 TraesCS2D01G548500 chr2D 92.597 2526 119 34 632 3105 568357754 568355245 0.000000e+00 3567
4 TraesCS2D01G548500 chr5D 98.585 2685 19 4 629 3299 545533144 545535823 0.000000e+00 4730
5 TraesCS2D01G548500 chr5D 92.524 2555 127 35 629 3141 494245452 494242920 0.000000e+00 3602
6 TraesCS2D01G548500 chr5D 82.959 980 118 27 632 1574 459925475 459924508 0.000000e+00 839
7 TraesCS2D01G548500 chr1D 97.469 2687 32 7 629 3299 444898365 444901031 0.000000e+00 4553
8 TraesCS2D01G548500 chr1D 93.395 969 54 5 629 1590 414451241 414450276 0.000000e+00 1426
9 TraesCS2D01G548500 chr7D 97.209 2687 39 11 629 3299 625182199 625179533 0.000000e+00 4514
10 TraesCS2D01G548500 chr7D 92.286 2528 117 40 629 3105 93605257 93607757 0.000000e+00 3517
11 TraesCS2D01G548500 chr7D 96.566 1951 47 7 629 2563 393113868 393111922 0.000000e+00 3214
12 TraesCS2D01G548500 chr7D 95.323 620 14 2 629 1234 393111299 393111917 0.000000e+00 970
13 TraesCS2D01G548500 chrUn 96.906 2683 42 11 629 3299 70158593 70155940 0.000000e+00 4457
14 TraesCS2D01G548500 chr3D 96.590 1730 44 9 1583 3299 45062228 45060501 0.000000e+00 2854
15 TraesCS2D01G548500 chr3D 96.746 922 26 4 629 1550 19766671 19765754 0.000000e+00 1533
16 TraesCS2D01G548500 chr7A 94.691 1733 72 13 1583 3299 15601158 15599430 0.000000e+00 2673
17 TraesCS2D01G548500 chr4D 94.959 972 40 4 626 1590 375069355 375070324 0.000000e+00 1515
18 TraesCS2D01G548500 chr2A 92.879 646 25 10 1 631 755693170 755693809 0.000000e+00 918
19 TraesCS2D01G548500 chr2B 91.938 645 27 9 1 637 766183410 766184037 0.000000e+00 880
20 TraesCS2D01G548500 chr1B 83.796 901 101 30 629 1508 572992371 572991495 0.000000e+00 813
21 TraesCS2D01G548500 chr6D 97.881 236 5 0 3064 3299 137509349 137509114 3.060000e-110 409


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G548500 chr2D 624286540 624289838 3298 False 6093 6093 100.000 1 3299 1 chr2D.!!$F1 3298
1 TraesCS2D01G548500 chr2D 547543417 547546097 2680 True 4643 4643 97.989 629 3299 1 chr2D.!!$R2 2670
2 TraesCS2D01G548500 chr2D 489932215 489934893 2678 True 4641 4641 97.989 629 3299 1 chr2D.!!$R1 2670
3 TraesCS2D01G548500 chr2D 568355245 568357754 2509 True 3567 3567 92.597 632 3105 1 chr2D.!!$R3 2473
4 TraesCS2D01G548500 chr5D 545533144 545535823 2679 False 4730 4730 98.585 629 3299 1 chr5D.!!$F1 2670
5 TraesCS2D01G548500 chr5D 494242920 494245452 2532 True 3602 3602 92.524 629 3141 1 chr5D.!!$R2 2512
6 TraesCS2D01G548500 chr5D 459924508 459925475 967 True 839 839 82.959 632 1574 1 chr5D.!!$R1 942
7 TraesCS2D01G548500 chr1D 444898365 444901031 2666 False 4553 4553 97.469 629 3299 1 chr1D.!!$F1 2670
8 TraesCS2D01G548500 chr1D 414450276 414451241 965 True 1426 1426 93.395 629 1590 1 chr1D.!!$R1 961
9 TraesCS2D01G548500 chr7D 625179533 625182199 2666 True 4514 4514 97.209 629 3299 1 chr7D.!!$R2 2670
10 TraesCS2D01G548500 chr7D 93605257 93607757 2500 False 3517 3517 92.286 629 3105 1 chr7D.!!$F1 2476
11 TraesCS2D01G548500 chr7D 393111922 393113868 1946 True 3214 3214 96.566 629 2563 1 chr7D.!!$R1 1934
12 TraesCS2D01G548500 chr7D 393111299 393111917 618 False 970 970 95.323 629 1234 1 chr7D.!!$F2 605
13 TraesCS2D01G548500 chrUn 70155940 70158593 2653 True 4457 4457 96.906 629 3299 1 chrUn.!!$R1 2670
14 TraesCS2D01G548500 chr3D 45060501 45062228 1727 True 2854 2854 96.590 1583 3299 1 chr3D.!!$R2 1716
15 TraesCS2D01G548500 chr3D 19765754 19766671 917 True 1533 1533 96.746 629 1550 1 chr3D.!!$R1 921
16 TraesCS2D01G548500 chr7A 15599430 15601158 1728 True 2673 2673 94.691 1583 3299 1 chr7A.!!$R1 1716
17 TraesCS2D01G548500 chr4D 375069355 375070324 969 False 1515 1515 94.959 626 1590 1 chr4D.!!$F1 964
18 TraesCS2D01G548500 chr2A 755693170 755693809 639 False 918 918 92.879 1 631 1 chr2A.!!$F1 630
19 TraesCS2D01G548500 chr2B 766183410 766184037 627 False 880 880 91.938 1 637 1 chr2B.!!$F1 636
20 TraesCS2D01G548500 chr1B 572991495 572992371 876 True 813 813 83.796 629 1508 1 chr1B.!!$R1 879

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
306 307 0.036010 AAGCGTGAAGGAGTGGGATG 60.036 55.0 0.0 0.0 0.0 3.51 F
308 309 0.036388 GCGTGAAGGAGTGGGATGAA 60.036 55.0 0.0 0.0 0.0 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1776 1908 3.276857 CCATAGCTTGCACAGACATCTT 58.723 45.455 0.0 0.0 0.0 2.40 R
2874 3301 2.060980 CCGCCTCTAGTGCCCTCTT 61.061 63.158 0.0 0.0 0.0 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 8.868522 AACATCTTGTTTTATCTCATTCAGGA 57.131 30.769 0.00 0.00 37.26 3.86
34 35 8.503458 ACATCTTGTTTTATCTCATTCAGGAG 57.497 34.615 0.00 0.00 36.21 3.69
35 36 6.992063 TCTTGTTTTATCTCATTCAGGAGC 57.008 37.500 0.00 0.00 34.84 4.70
36 37 5.882557 TCTTGTTTTATCTCATTCAGGAGCC 59.117 40.000 0.00 0.00 34.84 4.70
37 38 5.441718 TGTTTTATCTCATTCAGGAGCCT 57.558 39.130 0.00 0.00 34.84 4.58
38 39 5.188434 TGTTTTATCTCATTCAGGAGCCTG 58.812 41.667 10.29 10.29 44.86 4.85
39 40 4.428294 TTTATCTCATTCAGGAGCCTGG 57.572 45.455 16.06 1.16 43.75 4.45
40 41 0.473326 ATCTCATTCAGGAGCCTGGC 59.527 55.000 11.65 11.65 43.75 4.85
41 42 1.523258 CTCATTCAGGAGCCTGGCG 60.523 63.158 13.96 0.00 43.75 5.69
42 43 2.249413 CTCATTCAGGAGCCTGGCGT 62.249 60.000 13.96 1.21 43.75 5.68
43 44 2.110967 CATTCAGGAGCCTGGCGTG 61.111 63.158 13.96 12.33 43.75 5.34
44 45 3.984193 ATTCAGGAGCCTGGCGTGC 62.984 63.158 13.96 7.26 43.75 5.34
57 58 3.554692 CGTGCTCGGCGCTAAAGG 61.555 66.667 7.64 0.00 40.11 3.11
58 59 3.195698 GTGCTCGGCGCTAAAGGG 61.196 66.667 7.64 0.00 40.11 3.95
59 60 4.467084 TGCTCGGCGCTAAAGGGG 62.467 66.667 7.64 0.00 40.11 4.79
67 68 4.426313 GCTAAAGGGGCCGGTGCT 62.426 66.667 1.90 0.00 37.74 4.40
68 69 2.124695 CTAAAGGGGCCGGTGCTC 60.125 66.667 1.90 0.00 37.19 4.26
74 75 4.554036 GGGCCGGTGCTCCTGATC 62.554 72.222 1.90 0.00 37.74 2.92
75 76 4.899239 GGCCGGTGCTCCTGATCG 62.899 72.222 1.90 0.00 37.74 3.69
77 78 4.899239 CCGGTGCTCCTGATCGCC 62.899 72.222 2.85 0.00 0.00 5.54
78 79 4.147449 CGGTGCTCCTGATCGCCA 62.147 66.667 2.85 0.00 33.28 5.69
79 80 2.507944 GGTGCTCCTGATCGCCAT 59.492 61.111 0.00 0.00 33.28 4.40
80 81 1.890979 GGTGCTCCTGATCGCCATG 60.891 63.158 0.00 0.00 33.28 3.66
81 82 1.144716 GTGCTCCTGATCGCCATGA 59.855 57.895 0.00 0.00 0.00 3.07
82 83 0.879400 GTGCTCCTGATCGCCATGAG 60.879 60.000 0.00 5.87 39.57 2.90
83 84 1.301558 GCTCCTGATCGCCATGAGG 60.302 63.158 0.00 0.00 37.80 3.86
84 85 2.037620 GCTCCTGATCGCCATGAGGT 62.038 60.000 0.00 0.00 37.80 3.85
109 110 4.082523 CCTGGCCATGTCGTCCGT 62.083 66.667 5.51 0.00 0.00 4.69
110 111 2.815211 CTGGCCATGTCGTCCGTG 60.815 66.667 5.51 0.00 0.00 4.94
111 112 3.295304 CTGGCCATGTCGTCCGTGA 62.295 63.158 5.51 0.00 31.20 4.35
112 113 2.509336 GGCCATGTCGTCCGTGAG 60.509 66.667 0.00 0.00 31.20 3.51
113 114 2.571757 GCCATGTCGTCCGTGAGA 59.428 61.111 0.00 0.00 31.20 3.27
114 115 1.517257 GCCATGTCGTCCGTGAGAG 60.517 63.158 0.00 0.00 31.20 3.20
115 116 1.139734 CCATGTCGTCCGTGAGAGG 59.860 63.158 0.00 0.00 31.20 3.69
116 117 1.517257 CATGTCGTCCGTGAGAGGC 60.517 63.158 0.00 0.00 31.20 4.70
117 118 1.679305 ATGTCGTCCGTGAGAGGCT 60.679 57.895 0.00 0.00 0.00 4.58
118 119 1.938657 ATGTCGTCCGTGAGAGGCTG 61.939 60.000 0.00 0.00 0.00 4.85
119 120 3.749064 TCGTCCGTGAGAGGCTGC 61.749 66.667 0.00 0.00 0.00 5.25
120 121 4.056125 CGTCCGTGAGAGGCTGCA 62.056 66.667 0.50 0.00 0.00 4.41
121 122 2.581354 GTCCGTGAGAGGCTGCAT 59.419 61.111 0.50 0.00 0.00 3.96
122 123 1.812922 GTCCGTGAGAGGCTGCATG 60.813 63.158 0.50 0.00 0.00 4.06
123 124 2.513204 CCGTGAGAGGCTGCATGG 60.513 66.667 9.94 9.94 35.09 3.66
124 125 2.580815 CGTGAGAGGCTGCATGGA 59.419 61.111 0.50 0.00 0.00 3.41
125 126 1.812922 CGTGAGAGGCTGCATGGAC 60.813 63.158 0.50 0.00 0.00 4.02
126 127 1.297689 GTGAGAGGCTGCATGGACA 59.702 57.895 0.50 0.00 0.00 4.02
127 128 0.107312 GTGAGAGGCTGCATGGACAT 60.107 55.000 0.50 0.00 0.00 3.06
128 129 0.107361 TGAGAGGCTGCATGGACATG 60.107 55.000 7.91 7.91 41.60 3.21
129 130 0.818445 GAGAGGCTGCATGGACATGG 60.818 60.000 13.63 0.02 39.16 3.66
130 131 2.441532 AGGCTGCATGGACATGGC 60.442 61.111 13.63 9.19 39.16 4.40
131 132 2.756691 GGCTGCATGGACATGGCA 60.757 61.111 13.63 10.65 39.16 4.92
132 133 2.352821 GGCTGCATGGACATGGCAA 61.353 57.895 13.63 0.00 39.16 4.52
133 134 1.141019 GCTGCATGGACATGGCAAG 59.859 57.895 13.63 0.00 39.16 4.01
134 135 1.317431 GCTGCATGGACATGGCAAGA 61.317 55.000 13.63 0.00 39.16 3.02
135 136 1.179152 CTGCATGGACATGGCAAGAA 58.821 50.000 13.63 0.00 39.16 2.52
136 137 1.546923 CTGCATGGACATGGCAAGAAA 59.453 47.619 13.63 0.00 39.16 2.52
137 138 1.969208 TGCATGGACATGGCAAGAAAA 59.031 42.857 13.63 0.00 39.16 2.29
138 139 2.028839 TGCATGGACATGGCAAGAAAAG 60.029 45.455 13.63 0.00 39.16 2.27
139 140 2.675889 GCATGGACATGGCAAGAAAAGG 60.676 50.000 13.63 0.00 39.16 3.11
140 141 1.631405 TGGACATGGCAAGAAAAGGG 58.369 50.000 0.00 0.00 0.00 3.95
141 142 1.146774 TGGACATGGCAAGAAAAGGGA 59.853 47.619 0.00 0.00 0.00 4.20
142 143 1.546029 GGACATGGCAAGAAAAGGGAC 59.454 52.381 0.00 0.00 0.00 4.46
143 144 1.200020 GACATGGCAAGAAAAGGGACG 59.800 52.381 0.00 0.00 0.00 4.79
144 145 1.202879 ACATGGCAAGAAAAGGGACGA 60.203 47.619 0.00 0.00 0.00 4.20
145 146 1.470098 CATGGCAAGAAAAGGGACGAG 59.530 52.381 0.00 0.00 0.00 4.18
146 147 0.250727 TGGCAAGAAAAGGGACGAGG 60.251 55.000 0.00 0.00 0.00 4.63
147 148 0.036306 GGCAAGAAAAGGGACGAGGA 59.964 55.000 0.00 0.00 0.00 3.71
148 149 1.544759 GGCAAGAAAAGGGACGAGGAA 60.545 52.381 0.00 0.00 0.00 3.36
149 150 1.807142 GCAAGAAAAGGGACGAGGAAG 59.193 52.381 0.00 0.00 0.00 3.46
150 151 2.427506 CAAGAAAAGGGACGAGGAAGG 58.572 52.381 0.00 0.00 0.00 3.46
151 152 0.325272 AGAAAAGGGACGAGGAAGGC 59.675 55.000 0.00 0.00 0.00 4.35
152 153 0.677098 GAAAAGGGACGAGGAAGGCC 60.677 60.000 0.00 0.00 39.05 5.19
153 154 2.465055 AAAAGGGACGAGGAAGGCCG 62.465 60.000 0.00 0.00 41.32 6.13
154 155 4.698625 AGGGACGAGGAAGGCCGT 62.699 66.667 0.00 0.00 41.32 5.68
155 156 4.452733 GGGACGAGGAAGGCCGTG 62.453 72.222 0.00 0.00 41.32 4.94
156 157 3.379445 GGACGAGGAAGGCCGTGA 61.379 66.667 0.00 0.00 39.30 4.35
157 158 2.722201 GGACGAGGAAGGCCGTGAT 61.722 63.158 0.00 0.00 39.30 3.06
158 159 1.519455 GACGAGGAAGGCCGTGATG 60.519 63.158 0.00 0.00 39.30 3.07
159 160 2.202932 CGAGGAAGGCCGTGATGG 60.203 66.667 0.00 0.00 39.96 3.51
168 169 2.989639 CCGTGATGGCCAGGAAGA 59.010 61.111 13.05 0.00 32.66 2.87
169 170 1.153289 CCGTGATGGCCAGGAAGAG 60.153 63.158 13.05 0.00 32.66 2.85
170 171 1.153289 CGTGATGGCCAGGAAGAGG 60.153 63.158 13.05 0.00 32.66 3.69
171 172 1.617018 CGTGATGGCCAGGAAGAGGA 61.617 60.000 13.05 0.00 32.66 3.71
172 173 0.179936 GTGATGGCCAGGAAGAGGAG 59.820 60.000 13.05 0.00 0.00 3.69
173 174 0.984961 TGATGGCCAGGAAGAGGAGG 60.985 60.000 13.05 0.00 0.00 4.30
174 175 0.985490 GATGGCCAGGAAGAGGAGGT 60.985 60.000 13.05 0.00 0.00 3.85
175 176 1.277580 ATGGCCAGGAAGAGGAGGTG 61.278 60.000 13.05 0.00 0.00 4.00
176 177 2.270527 GCCAGGAAGAGGAGGTGC 59.729 66.667 0.00 0.00 0.00 5.01
177 178 2.596851 GCCAGGAAGAGGAGGTGCA 61.597 63.158 0.00 0.00 0.00 4.57
178 179 1.919600 GCCAGGAAGAGGAGGTGCAT 61.920 60.000 0.00 0.00 0.00 3.96
179 180 0.107312 CCAGGAAGAGGAGGTGCATG 60.107 60.000 0.00 0.00 0.00 4.06
180 181 0.107312 CAGGAAGAGGAGGTGCATGG 60.107 60.000 0.00 0.00 0.00 3.66
181 182 1.225704 GGAAGAGGAGGTGCATGGG 59.774 63.158 0.00 0.00 0.00 4.00
182 183 1.566298 GGAAGAGGAGGTGCATGGGT 61.566 60.000 0.00 0.00 0.00 4.51
183 184 0.393537 GAAGAGGAGGTGCATGGGTG 60.394 60.000 0.00 0.00 0.00 4.61
184 185 1.136329 AAGAGGAGGTGCATGGGTGT 61.136 55.000 0.00 0.00 0.00 4.16
185 186 1.377725 GAGGAGGTGCATGGGTGTG 60.378 63.158 0.00 0.00 0.00 3.82
186 187 1.841302 GAGGAGGTGCATGGGTGTGA 61.841 60.000 0.00 0.00 0.00 3.58
187 188 1.210204 AGGAGGTGCATGGGTGTGAT 61.210 55.000 0.00 0.00 0.00 3.06
188 189 0.323725 GGAGGTGCATGGGTGTGATT 60.324 55.000 0.00 0.00 0.00 2.57
189 190 0.813184 GAGGTGCATGGGTGTGATTG 59.187 55.000 0.00 0.00 0.00 2.67
190 191 0.112995 AGGTGCATGGGTGTGATTGT 59.887 50.000 0.00 0.00 0.00 2.71
191 192 0.244450 GGTGCATGGGTGTGATTGTG 59.756 55.000 0.00 0.00 0.00 3.33
192 193 1.246649 GTGCATGGGTGTGATTGTGA 58.753 50.000 0.00 0.00 0.00 3.58
193 194 1.612950 GTGCATGGGTGTGATTGTGAA 59.387 47.619 0.00 0.00 0.00 3.18
194 195 1.612950 TGCATGGGTGTGATTGTGAAC 59.387 47.619 0.00 0.00 0.00 3.18
195 196 1.612950 GCATGGGTGTGATTGTGAACA 59.387 47.619 0.00 0.00 0.00 3.18
196 197 2.352030 GCATGGGTGTGATTGTGAACAG 60.352 50.000 0.00 0.00 0.00 3.16
197 198 2.727123 TGGGTGTGATTGTGAACAGT 57.273 45.000 0.00 0.00 0.00 3.55
198 199 3.011566 TGGGTGTGATTGTGAACAGTT 57.988 42.857 0.00 0.00 0.00 3.16
199 200 3.360867 TGGGTGTGATTGTGAACAGTTT 58.639 40.909 0.00 0.00 0.00 2.66
200 201 3.130164 TGGGTGTGATTGTGAACAGTTTG 59.870 43.478 0.00 0.00 0.00 2.93
201 202 3.130340 GGGTGTGATTGTGAACAGTTTGT 59.870 43.478 0.00 0.00 0.00 2.83
202 203 4.104776 GGTGTGATTGTGAACAGTTTGTG 58.895 43.478 0.00 0.00 0.00 3.33
203 204 4.142491 GGTGTGATTGTGAACAGTTTGTGA 60.142 41.667 0.00 0.00 0.00 3.58
204 205 5.450412 GGTGTGATTGTGAACAGTTTGTGAT 60.450 40.000 0.00 0.00 0.00 3.06
205 206 6.035843 GTGTGATTGTGAACAGTTTGTGATT 58.964 36.000 0.00 0.00 0.00 2.57
206 207 6.531240 GTGTGATTGTGAACAGTTTGTGATTT 59.469 34.615 0.00 0.00 0.00 2.17
207 208 7.063308 GTGTGATTGTGAACAGTTTGTGATTTT 59.937 33.333 0.00 0.00 0.00 1.82
208 209 7.063191 TGTGATTGTGAACAGTTTGTGATTTTG 59.937 33.333 0.00 0.00 0.00 2.44
209 210 5.776519 TTGTGAACAGTTTGTGATTTTGC 57.223 34.783 0.00 0.00 0.00 3.68
210 211 4.180057 TGTGAACAGTTTGTGATTTTGCC 58.820 39.130 0.00 0.00 0.00 4.52
211 212 4.081752 TGTGAACAGTTTGTGATTTTGCCT 60.082 37.500 0.00 0.00 0.00 4.75
212 213 5.126222 TGTGAACAGTTTGTGATTTTGCCTA 59.874 36.000 0.00 0.00 0.00 3.93
213 214 5.687285 GTGAACAGTTTGTGATTTTGCCTAG 59.313 40.000 0.00 0.00 0.00 3.02
214 215 4.853924 ACAGTTTGTGATTTTGCCTAGG 57.146 40.909 3.67 3.67 0.00 3.02
215 216 3.573967 ACAGTTTGTGATTTTGCCTAGGG 59.426 43.478 11.72 0.00 0.00 3.53
216 217 3.826157 CAGTTTGTGATTTTGCCTAGGGA 59.174 43.478 11.72 4.36 0.00 4.20
217 218 4.082125 AGTTTGTGATTTTGCCTAGGGAG 58.918 43.478 11.72 0.00 0.00 4.30
218 219 2.806945 TGTGATTTTGCCTAGGGAGG 57.193 50.000 11.72 0.00 46.93 4.30
228 229 3.567902 CTAGGGAGGATCAGGGCTT 57.432 57.895 0.00 0.00 36.25 4.35
229 230 1.813102 CTAGGGAGGATCAGGGCTTT 58.187 55.000 0.00 0.00 36.25 3.51
230 231 1.696884 CTAGGGAGGATCAGGGCTTTC 59.303 57.143 0.00 0.00 36.25 2.62
231 232 0.045469 AGGGAGGATCAGGGCTTTCT 59.955 55.000 0.00 0.00 36.25 2.52
232 233 0.922626 GGGAGGATCAGGGCTTTCTT 59.077 55.000 0.00 0.00 36.25 2.52
233 234 1.133945 GGGAGGATCAGGGCTTTCTTC 60.134 57.143 0.00 0.00 36.25 2.87
234 235 1.843206 GGAGGATCAGGGCTTTCTTCT 59.157 52.381 0.00 0.00 36.25 2.85
235 236 2.240921 GGAGGATCAGGGCTTTCTTCTT 59.759 50.000 0.00 0.00 36.25 2.52
236 237 3.308760 GGAGGATCAGGGCTTTCTTCTTT 60.309 47.826 0.00 0.00 36.25 2.52
237 238 4.080299 GGAGGATCAGGGCTTTCTTCTTTA 60.080 45.833 0.00 0.00 36.25 1.85
238 239 5.398467 GGAGGATCAGGGCTTTCTTCTTTAT 60.398 44.000 0.00 0.00 36.25 1.40
239 240 6.183361 GGAGGATCAGGGCTTTCTTCTTTATA 60.183 42.308 0.00 0.00 36.25 0.98
240 241 6.836242 AGGATCAGGGCTTTCTTCTTTATAG 58.164 40.000 0.00 0.00 0.00 1.31
241 242 6.000840 GGATCAGGGCTTTCTTCTTTATAGG 58.999 44.000 0.00 0.00 0.00 2.57
242 243 5.373812 TCAGGGCTTTCTTCTTTATAGGG 57.626 43.478 0.00 0.00 0.00 3.53
243 244 5.036916 TCAGGGCTTTCTTCTTTATAGGGA 58.963 41.667 0.00 0.00 0.00 4.20
244 245 5.491078 TCAGGGCTTTCTTCTTTATAGGGAA 59.509 40.000 0.00 0.00 0.00 3.97
245 246 5.825151 CAGGGCTTTCTTCTTTATAGGGAAG 59.175 44.000 9.24 9.24 39.94 3.46
246 247 5.492887 AGGGCTTTCTTCTTTATAGGGAAGT 59.507 40.000 13.04 0.00 39.67 3.01
247 248 6.677076 AGGGCTTTCTTCTTTATAGGGAAGTA 59.323 38.462 13.04 5.07 39.67 2.24
248 249 7.184022 AGGGCTTTCTTCTTTATAGGGAAGTAA 59.816 37.037 13.04 10.32 39.67 2.24
249 250 7.832685 GGGCTTTCTTCTTTATAGGGAAGTAAA 59.167 37.037 13.04 11.43 39.67 2.01
250 251 8.894731 GGCTTTCTTCTTTATAGGGAAGTAAAG 58.105 37.037 19.67 19.67 39.67 1.85
251 252 9.451002 GCTTTCTTCTTTATAGGGAAGTAAAGT 57.549 33.333 21.61 0.00 39.67 2.66
263 264 7.949690 AGGGAAGTAAAGTGTAAGTTTGTTT 57.050 32.000 0.00 0.00 40.30 2.83
264 265 8.357290 AGGGAAGTAAAGTGTAAGTTTGTTTT 57.643 30.769 0.00 0.00 40.30 2.43
265 266 8.248253 AGGGAAGTAAAGTGTAAGTTTGTTTTG 58.752 33.333 0.00 0.00 40.30 2.44
266 267 7.490079 GGGAAGTAAAGTGTAAGTTTGTTTTGG 59.510 37.037 0.00 0.00 40.30 3.28
267 268 7.009815 GGAAGTAAAGTGTAAGTTTGTTTTGGC 59.990 37.037 0.00 0.00 40.30 4.52
268 269 6.926313 AGTAAAGTGTAAGTTTGTTTTGGCA 58.074 32.000 0.00 0.00 40.30 4.92
269 270 7.033185 AGTAAAGTGTAAGTTTGTTTTGGCAG 58.967 34.615 0.00 0.00 40.30 4.85
270 271 3.780902 AGTGTAAGTTTGTTTTGGCAGC 58.219 40.909 0.00 0.00 0.00 5.25
271 272 2.863740 GTGTAAGTTTGTTTTGGCAGCC 59.136 45.455 3.66 3.66 0.00 4.85
272 273 2.497675 TGTAAGTTTGTTTTGGCAGCCA 59.502 40.909 11.22 11.22 0.00 4.75
273 274 3.133721 TGTAAGTTTGTTTTGGCAGCCAT 59.866 39.130 17.09 0.00 31.53 4.40
274 275 2.243602 AGTTTGTTTTGGCAGCCATG 57.756 45.000 17.09 0.00 31.53 3.66
275 276 1.202675 AGTTTGTTTTGGCAGCCATGG 60.203 47.619 17.09 7.63 31.53 3.66
276 277 1.126488 TTTGTTTTGGCAGCCATGGA 58.874 45.000 17.09 0.00 31.53 3.41
277 278 1.350071 TTGTTTTGGCAGCCATGGAT 58.650 45.000 17.09 6.18 31.53 3.41
278 279 2.228545 TGTTTTGGCAGCCATGGATA 57.771 45.000 17.09 0.00 31.53 2.59
279 280 2.101783 TGTTTTGGCAGCCATGGATAG 58.898 47.619 17.09 5.44 31.53 2.08
280 281 1.113788 TTTTGGCAGCCATGGATAGC 58.886 50.000 17.09 15.57 31.53 2.97
281 282 0.259647 TTTGGCAGCCATGGATAGCT 59.740 50.000 17.09 1.32 40.89 3.32
282 283 1.139439 TTGGCAGCCATGGATAGCTA 58.861 50.000 17.09 11.13 37.18 3.32
283 284 0.689055 TGGCAGCCATGGATAGCTAG 59.311 55.000 18.40 0.00 37.18 3.42
284 285 0.689623 GGCAGCCATGGATAGCTAGT 59.310 55.000 18.40 0.00 37.18 2.57
285 286 1.072965 GGCAGCCATGGATAGCTAGTT 59.927 52.381 18.40 0.00 37.18 2.24
286 287 2.149578 GCAGCCATGGATAGCTAGTTG 58.850 52.381 18.40 0.00 37.18 3.16
287 288 2.224378 GCAGCCATGGATAGCTAGTTGA 60.224 50.000 18.40 0.00 37.18 3.18
288 289 3.745480 GCAGCCATGGATAGCTAGTTGAA 60.745 47.826 18.40 0.00 37.18 2.69
289 290 4.063689 CAGCCATGGATAGCTAGTTGAAG 58.936 47.826 18.40 0.00 37.18 3.02
290 291 2.810852 GCCATGGATAGCTAGTTGAAGC 59.189 50.000 18.40 0.00 43.11 3.86
298 299 2.080286 GCTAGTTGAAGCGTGAAGGA 57.920 50.000 0.00 0.00 31.76 3.36
299 300 1.996191 GCTAGTTGAAGCGTGAAGGAG 59.004 52.381 0.00 0.00 31.76 3.69
300 301 2.610727 GCTAGTTGAAGCGTGAAGGAGT 60.611 50.000 0.00 0.00 31.76 3.85
301 302 1.871080 AGTTGAAGCGTGAAGGAGTG 58.129 50.000 0.00 0.00 0.00 3.51
302 303 0.868406 GTTGAAGCGTGAAGGAGTGG 59.132 55.000 0.00 0.00 0.00 4.00
303 304 0.250295 TTGAAGCGTGAAGGAGTGGG 60.250 55.000 0.00 0.00 0.00 4.61
304 305 1.118965 TGAAGCGTGAAGGAGTGGGA 61.119 55.000 0.00 0.00 0.00 4.37
305 306 0.250513 GAAGCGTGAAGGAGTGGGAT 59.749 55.000 0.00 0.00 0.00 3.85
306 307 0.036010 AAGCGTGAAGGAGTGGGATG 60.036 55.000 0.00 0.00 0.00 3.51
307 308 0.904865 AGCGTGAAGGAGTGGGATGA 60.905 55.000 0.00 0.00 0.00 2.92
308 309 0.036388 GCGTGAAGGAGTGGGATGAA 60.036 55.000 0.00 0.00 0.00 2.57
309 310 2.009042 GCGTGAAGGAGTGGGATGAAG 61.009 57.143 0.00 0.00 0.00 3.02
310 311 1.550524 CGTGAAGGAGTGGGATGAAGA 59.449 52.381 0.00 0.00 0.00 2.87
311 312 2.028112 CGTGAAGGAGTGGGATGAAGAA 60.028 50.000 0.00 0.00 0.00 2.52
312 313 3.557054 CGTGAAGGAGTGGGATGAAGAAA 60.557 47.826 0.00 0.00 0.00 2.52
313 314 4.006319 GTGAAGGAGTGGGATGAAGAAAG 58.994 47.826 0.00 0.00 0.00 2.62
314 315 3.009473 TGAAGGAGTGGGATGAAGAAAGG 59.991 47.826 0.00 0.00 0.00 3.11
315 316 2.637165 AGGAGTGGGATGAAGAAAGGT 58.363 47.619 0.00 0.00 0.00 3.50
316 317 2.989571 AGGAGTGGGATGAAGAAAGGTT 59.010 45.455 0.00 0.00 0.00 3.50
317 318 3.084786 GGAGTGGGATGAAGAAAGGTTG 58.915 50.000 0.00 0.00 0.00 3.77
318 319 3.498661 GGAGTGGGATGAAGAAAGGTTGT 60.499 47.826 0.00 0.00 0.00 3.32
319 320 4.263331 GGAGTGGGATGAAGAAAGGTTGTA 60.263 45.833 0.00 0.00 0.00 2.41
320 321 4.911390 AGTGGGATGAAGAAAGGTTGTAG 58.089 43.478 0.00 0.00 0.00 2.74
321 322 4.597507 AGTGGGATGAAGAAAGGTTGTAGA 59.402 41.667 0.00 0.00 0.00 2.59
322 323 5.251700 AGTGGGATGAAGAAAGGTTGTAGAT 59.748 40.000 0.00 0.00 0.00 1.98
323 324 5.946377 GTGGGATGAAGAAAGGTTGTAGATT 59.054 40.000 0.00 0.00 0.00 2.40
324 325 7.037586 AGTGGGATGAAGAAAGGTTGTAGATTA 60.038 37.037 0.00 0.00 0.00 1.75
325 326 7.281100 GTGGGATGAAGAAAGGTTGTAGATTAG 59.719 40.741 0.00 0.00 0.00 1.73
326 327 7.037586 TGGGATGAAGAAAGGTTGTAGATTAGT 60.038 37.037 0.00 0.00 0.00 2.24
327 328 7.829706 GGGATGAAGAAAGGTTGTAGATTAGTT 59.170 37.037 0.00 0.00 0.00 2.24
328 329 8.669243 GGATGAAGAAAGGTTGTAGATTAGTTG 58.331 37.037 0.00 0.00 0.00 3.16
329 330 7.979444 TGAAGAAAGGTTGTAGATTAGTTGG 57.021 36.000 0.00 0.00 0.00 3.77
330 331 6.430000 TGAAGAAAGGTTGTAGATTAGTTGGC 59.570 38.462 0.00 0.00 0.00 4.52
331 332 6.128138 AGAAAGGTTGTAGATTAGTTGGCT 57.872 37.500 0.00 0.00 0.00 4.75
332 333 7.253905 AGAAAGGTTGTAGATTAGTTGGCTA 57.746 36.000 0.00 0.00 0.00 3.93
333 334 7.686434 AGAAAGGTTGTAGATTAGTTGGCTAA 58.314 34.615 0.00 0.00 40.98 3.09
335 336 7.865706 AAGGTTGTAGATTAGTTGGCTAATG 57.134 36.000 4.79 0.00 45.16 1.90
336 337 6.958767 AGGTTGTAGATTAGTTGGCTAATGT 58.041 36.000 4.79 3.95 45.16 2.71
337 338 7.402862 AGGTTGTAGATTAGTTGGCTAATGTT 58.597 34.615 4.79 0.00 45.16 2.71
338 339 7.336931 AGGTTGTAGATTAGTTGGCTAATGTTG 59.663 37.037 4.79 0.00 45.16 3.33
339 340 7.120726 GGTTGTAGATTAGTTGGCTAATGTTGT 59.879 37.037 4.79 0.00 45.16 3.32
340 341 7.609760 TGTAGATTAGTTGGCTAATGTTGTG 57.390 36.000 4.79 0.00 45.16 3.33
341 342 6.597672 TGTAGATTAGTTGGCTAATGTTGTGG 59.402 38.462 4.79 0.00 45.16 4.17
342 343 5.815581 AGATTAGTTGGCTAATGTTGTGGA 58.184 37.500 4.79 0.00 45.16 4.02
343 344 5.882557 AGATTAGTTGGCTAATGTTGTGGAG 59.117 40.000 4.79 0.00 45.16 3.86
344 345 2.795329 AGTTGGCTAATGTTGTGGAGG 58.205 47.619 0.00 0.00 0.00 4.30
345 346 1.202348 GTTGGCTAATGTTGTGGAGGC 59.798 52.381 0.00 0.00 35.18 4.70
346 347 0.698238 TGGCTAATGTTGTGGAGGCT 59.302 50.000 0.00 0.00 35.61 4.58
347 348 1.075374 TGGCTAATGTTGTGGAGGCTT 59.925 47.619 0.00 0.00 35.61 4.35
348 349 1.474077 GGCTAATGTTGTGGAGGCTTG 59.526 52.381 0.00 0.00 0.00 4.01
349 350 2.162681 GCTAATGTTGTGGAGGCTTGT 58.837 47.619 0.00 0.00 0.00 3.16
350 351 3.343617 GCTAATGTTGTGGAGGCTTGTA 58.656 45.455 0.00 0.00 0.00 2.41
351 352 3.375299 GCTAATGTTGTGGAGGCTTGTAG 59.625 47.826 0.00 0.00 0.00 2.74
352 353 3.508845 AATGTTGTGGAGGCTTGTAGT 57.491 42.857 0.00 0.00 0.00 2.73
353 354 2.543777 TGTTGTGGAGGCTTGTAGTC 57.456 50.000 0.00 0.00 0.00 2.59
354 355 1.270094 TGTTGTGGAGGCTTGTAGTCG 60.270 52.381 0.00 0.00 0.00 4.18
355 356 0.320374 TTGTGGAGGCTTGTAGTCGG 59.680 55.000 0.00 0.00 0.00 4.79
356 357 1.218316 GTGGAGGCTTGTAGTCGGG 59.782 63.158 0.00 0.00 0.00 5.14
357 358 1.987855 TGGAGGCTTGTAGTCGGGG 60.988 63.158 0.00 0.00 0.00 5.73
358 359 2.732619 GGAGGCTTGTAGTCGGGGG 61.733 68.421 0.00 0.00 0.00 5.40
359 360 3.387225 GAGGCTTGTAGTCGGGGGC 62.387 68.421 0.00 0.00 0.00 5.80
360 361 3.712907 GGCTTGTAGTCGGGGGCA 61.713 66.667 0.00 0.00 0.00 5.36
361 362 2.349755 GCTTGTAGTCGGGGGCAA 59.650 61.111 0.00 0.00 0.00 4.52
362 363 1.302993 GCTTGTAGTCGGGGGCAAA 60.303 57.895 0.00 0.00 0.00 3.68
363 364 0.679960 GCTTGTAGTCGGGGGCAAAT 60.680 55.000 0.00 0.00 0.00 2.32
364 365 1.407712 GCTTGTAGTCGGGGGCAAATA 60.408 52.381 0.00 0.00 0.00 1.40
365 366 2.561569 CTTGTAGTCGGGGGCAAATAG 58.438 52.381 0.00 0.00 0.00 1.73
366 367 0.179468 TGTAGTCGGGGGCAAATAGC 59.821 55.000 0.00 0.00 44.65 2.97
367 368 0.468648 GTAGTCGGGGGCAAATAGCT 59.531 55.000 0.00 0.00 44.79 3.32
368 369 0.756903 TAGTCGGGGGCAAATAGCTC 59.243 55.000 0.00 0.00 45.58 4.09
374 375 3.577389 GGGCAAATAGCTCCTGTGT 57.423 52.632 0.00 0.00 44.79 3.72
375 376 1.098050 GGGCAAATAGCTCCTGTGTG 58.902 55.000 0.00 0.00 44.79 3.82
376 377 0.453390 GGCAAATAGCTCCTGTGTGC 59.547 55.000 0.00 0.00 44.79 4.57
377 378 1.457346 GCAAATAGCTCCTGTGTGCT 58.543 50.000 0.00 0.00 43.37 4.40
378 379 1.399791 GCAAATAGCTCCTGTGTGCTC 59.600 52.381 0.00 0.00 41.34 4.26
379 380 2.703416 CAAATAGCTCCTGTGTGCTCA 58.297 47.619 0.00 0.00 41.34 4.26
380 381 2.676839 CAAATAGCTCCTGTGTGCTCAG 59.323 50.000 0.00 0.00 41.34 3.35
381 382 0.177604 ATAGCTCCTGTGTGCTCAGC 59.822 55.000 0.00 0.00 41.34 4.26
382 383 2.218037 TAGCTCCTGTGTGCTCAGCG 62.218 60.000 0.00 0.00 41.34 5.18
383 384 2.433838 CTCCTGTGTGCTCAGCGG 60.434 66.667 0.00 0.00 34.47 5.52
384 385 3.231889 CTCCTGTGTGCTCAGCGGT 62.232 63.158 0.00 0.00 34.47 5.68
385 386 2.740055 CCTGTGTGCTCAGCGGTC 60.740 66.667 0.00 0.00 34.47 4.79
386 387 2.029518 CTGTGTGCTCAGCGGTCA 59.970 61.111 0.00 0.00 0.00 4.02
387 388 1.595109 CTGTGTGCTCAGCGGTCAA 60.595 57.895 0.00 0.00 0.00 3.18
388 389 1.153269 TGTGTGCTCAGCGGTCAAA 60.153 52.632 0.00 0.00 0.00 2.69
389 390 1.159713 TGTGTGCTCAGCGGTCAAAG 61.160 55.000 0.00 0.00 0.00 2.77
390 391 0.880278 GTGTGCTCAGCGGTCAAAGA 60.880 55.000 0.00 0.00 0.00 2.52
391 392 0.179059 TGTGCTCAGCGGTCAAAGAA 60.179 50.000 0.00 0.00 0.00 2.52
392 393 0.514691 GTGCTCAGCGGTCAAAGAAG 59.485 55.000 0.00 0.00 0.00 2.85
393 394 0.392706 TGCTCAGCGGTCAAAGAAGA 59.607 50.000 0.00 0.00 0.00 2.87
394 395 0.793250 GCTCAGCGGTCAAAGAAGAC 59.207 55.000 0.00 0.00 37.80 3.01
395 396 1.606737 GCTCAGCGGTCAAAGAAGACT 60.607 52.381 0.00 0.00 38.57 3.24
396 397 2.760374 CTCAGCGGTCAAAGAAGACTT 58.240 47.619 0.00 0.00 38.57 3.01
397 398 3.134458 CTCAGCGGTCAAAGAAGACTTT 58.866 45.455 0.00 0.00 45.75 2.66
409 410 5.659440 AAGAAGACTTTGGCAAACTTTGA 57.341 34.783 8.93 0.00 31.71 2.69
410 411 5.254339 AGAAGACTTTGGCAAACTTTGAG 57.746 39.130 8.93 0.24 0.00 3.02
411 412 4.949856 AGAAGACTTTGGCAAACTTTGAGA 59.050 37.500 8.93 0.00 0.00 3.27
412 413 4.907879 AGACTTTGGCAAACTTTGAGAG 57.092 40.909 8.93 0.00 0.00 3.20
413 414 4.273318 AGACTTTGGCAAACTTTGAGAGT 58.727 39.130 8.93 2.34 41.47 3.24
438 439 3.934457 AAAAAGGGTAAGTGATTGCCG 57.066 42.857 0.00 0.00 0.00 5.69
439 440 2.579410 AAAGGGTAAGTGATTGCCGT 57.421 45.000 0.00 0.00 0.00 5.68
440 441 2.579410 AAGGGTAAGTGATTGCCGTT 57.421 45.000 0.00 0.00 31.58 4.44
441 442 2.109425 AGGGTAAGTGATTGCCGTTC 57.891 50.000 0.00 0.00 0.00 3.95
442 443 1.628846 AGGGTAAGTGATTGCCGTTCT 59.371 47.619 0.00 0.00 0.00 3.01
443 444 2.835764 AGGGTAAGTGATTGCCGTTCTA 59.164 45.455 0.00 0.00 0.00 2.10
444 445 3.118738 AGGGTAAGTGATTGCCGTTCTAG 60.119 47.826 0.00 0.00 0.00 2.43
445 446 3.118884 GGGTAAGTGATTGCCGTTCTAGA 60.119 47.826 0.00 0.00 0.00 2.43
446 447 3.864003 GGTAAGTGATTGCCGTTCTAGAC 59.136 47.826 0.00 0.00 0.00 2.59
447 448 3.963428 AAGTGATTGCCGTTCTAGACT 57.037 42.857 0.00 0.00 0.00 3.24
448 449 3.512033 AGTGATTGCCGTTCTAGACTC 57.488 47.619 0.00 0.00 0.00 3.36
449 450 2.159366 AGTGATTGCCGTTCTAGACTCG 60.159 50.000 8.89 8.89 0.00 4.18
450 451 1.201343 GATTGCCGTTCTAGACTCGC 58.799 55.000 10.02 4.54 0.00 5.03
451 452 0.179108 ATTGCCGTTCTAGACTCGCC 60.179 55.000 10.02 1.81 0.00 5.54
452 453 2.278013 GCCGTTCTAGACTCGCCG 60.278 66.667 10.02 0.94 0.00 6.46
453 454 2.758089 GCCGTTCTAGACTCGCCGA 61.758 63.158 10.02 0.00 0.00 5.54
454 455 1.352404 CCGTTCTAGACTCGCCGAG 59.648 63.158 13.52 13.52 35.52 4.63
455 456 1.352404 CGTTCTAGACTCGCCGAGG 59.648 63.158 19.61 0.00 33.35 4.63
456 457 1.728672 GTTCTAGACTCGCCGAGGG 59.271 63.158 19.61 5.76 33.35 4.30
457 458 0.747283 GTTCTAGACTCGCCGAGGGA 60.747 60.000 19.61 8.02 33.35 4.20
458 459 0.464013 TTCTAGACTCGCCGAGGGAG 60.464 60.000 19.61 11.90 46.05 4.30
459 460 1.894756 CTAGACTCGCCGAGGGAGG 60.895 68.421 19.61 2.20 45.11 4.30
460 461 2.326773 CTAGACTCGCCGAGGGAGGA 62.327 65.000 19.61 0.00 45.11 3.71
461 462 2.605854 TAGACTCGCCGAGGGAGGAC 62.606 65.000 19.61 12.62 45.11 3.85
462 463 3.999297 GACTCGCCGAGGGAGGACT 62.999 68.421 19.61 0.00 45.11 3.85
463 464 2.756283 CTCGCCGAGGGAGGACTT 60.756 66.667 6.13 0.00 38.66 3.01
464 465 3.068691 TCGCCGAGGGAGGACTTG 61.069 66.667 0.00 0.00 0.00 3.16
465 466 4.148825 CGCCGAGGGAGGACTTGG 62.149 72.222 0.00 0.00 43.70 3.61
466 467 2.683933 GCCGAGGGAGGACTTGGA 60.684 66.667 3.69 0.00 43.58 3.53
467 468 2.291043 GCCGAGGGAGGACTTGGAA 61.291 63.158 3.69 0.00 43.58 3.53
468 469 1.838073 GCCGAGGGAGGACTTGGAAA 61.838 60.000 3.69 0.00 43.58 3.13
469 470 0.690762 CCGAGGGAGGACTTGGAAAA 59.309 55.000 0.00 0.00 43.58 2.29
470 471 1.610886 CCGAGGGAGGACTTGGAAAAC 60.611 57.143 0.00 0.00 43.58 2.43
471 472 1.348036 CGAGGGAGGACTTGGAAAACT 59.652 52.381 0.00 0.00 0.00 2.66
472 473 2.224548 CGAGGGAGGACTTGGAAAACTT 60.225 50.000 0.00 0.00 0.00 2.66
473 474 3.747708 CGAGGGAGGACTTGGAAAACTTT 60.748 47.826 0.00 0.00 0.00 2.66
474 475 3.566351 AGGGAGGACTTGGAAAACTTTG 58.434 45.455 0.00 0.00 0.00 2.77
475 476 3.204382 AGGGAGGACTTGGAAAACTTTGA 59.796 43.478 0.00 0.00 0.00 2.69
476 477 3.570125 GGGAGGACTTGGAAAACTTTGAG 59.430 47.826 0.00 0.00 0.00 3.02
477 478 4.461198 GGAGGACTTGGAAAACTTTGAGA 58.539 43.478 0.00 0.00 0.00 3.27
478 479 4.517075 GGAGGACTTGGAAAACTTTGAGAG 59.483 45.833 0.00 0.00 0.00 3.20
479 480 5.117406 AGGACTTGGAAAACTTTGAGAGT 57.883 39.130 0.00 0.00 41.47 3.24
490 491 4.519906 ACTTTGAGAGTTTGGAAAGGGA 57.480 40.909 0.00 0.00 33.92 4.20
491 492 4.464947 ACTTTGAGAGTTTGGAAAGGGAG 58.535 43.478 0.00 0.00 33.92 4.30
492 493 2.568623 TGAGAGTTTGGAAAGGGAGC 57.431 50.000 0.00 0.00 0.00 4.70
493 494 1.774254 TGAGAGTTTGGAAAGGGAGCA 59.226 47.619 0.00 0.00 0.00 4.26
494 495 2.174639 TGAGAGTTTGGAAAGGGAGCAA 59.825 45.455 0.00 0.00 0.00 3.91
495 496 2.816672 GAGAGTTTGGAAAGGGAGCAAG 59.183 50.000 0.00 0.00 0.00 4.01
496 497 2.443255 AGAGTTTGGAAAGGGAGCAAGA 59.557 45.455 0.00 0.00 0.00 3.02
497 498 2.816672 GAGTTTGGAAAGGGAGCAAGAG 59.183 50.000 0.00 0.00 0.00 2.85
498 499 1.270826 GTTTGGAAAGGGAGCAAGAGC 59.729 52.381 0.00 0.00 42.56 4.09
509 510 4.571250 CAAGAGCTTGCCGTCGTA 57.429 55.556 0.00 0.00 33.45 3.43
510 511 2.363807 CAAGAGCTTGCCGTCGTAG 58.636 57.895 0.00 0.00 33.45 3.51
511 512 0.109272 CAAGAGCTTGCCGTCGTAGA 60.109 55.000 0.00 0.00 33.45 2.59
512 513 2.319489 CAAGAGCTTGCCGTCGTAGAC 61.319 57.143 0.00 0.00 43.33 2.59
513 514 4.586815 CAAGAGCTTGCCGTCGTAGACT 62.587 54.545 0.00 0.00 44.04 3.24
523 524 3.545724 TCGTAGACTCGCTGAAGGA 57.454 52.632 0.00 0.00 0.00 3.36
524 525 1.370609 TCGTAGACTCGCTGAAGGAG 58.629 55.000 0.00 0.00 37.54 3.69
525 526 0.378962 CGTAGACTCGCTGAAGGAGG 59.621 60.000 0.00 0.00 35.82 4.30
526 527 1.752683 GTAGACTCGCTGAAGGAGGA 58.247 55.000 0.00 0.00 35.82 3.71
527 528 1.402613 GTAGACTCGCTGAAGGAGGAC 59.597 57.143 0.00 0.00 35.82 3.85
528 529 0.039035 AGACTCGCTGAAGGAGGACT 59.961 55.000 0.00 0.00 35.82 3.85
529 530 0.892063 GACTCGCTGAAGGAGGACTT 59.108 55.000 0.00 0.00 43.65 3.01
530 531 0.605589 ACTCGCTGAAGGAGGACTTG 59.394 55.000 0.00 0.00 40.21 3.16
531 532 0.108424 CTCGCTGAAGGAGGACTTGG 60.108 60.000 0.00 0.00 40.21 3.61
532 533 0.541998 TCGCTGAAGGAGGACTTGGA 60.542 55.000 0.00 0.00 40.21 3.53
533 534 0.321671 CGCTGAAGGAGGACTTGGAA 59.678 55.000 0.00 0.00 40.21 3.53
534 535 1.674221 CGCTGAAGGAGGACTTGGAAG 60.674 57.143 0.00 0.00 40.21 3.46
535 536 1.349357 GCTGAAGGAGGACTTGGAAGT 59.651 52.381 0.00 0.00 40.21 3.01
549 550 2.615391 TGGAAGTCAGTCCATGGTACA 58.385 47.619 12.58 0.00 42.97 2.90
550 551 2.567169 TGGAAGTCAGTCCATGGTACAG 59.433 50.000 12.58 6.05 42.97 2.74
551 552 4.012679 TGGAAGTCAGTCCATGGTACAGT 61.013 47.826 12.58 0.00 42.97 3.55
552 553 5.488911 TGGAAGTCAGTCCATGGTACAGTT 61.489 45.833 12.58 3.76 42.97 3.16
553 554 6.222961 TGGAAGTCAGTCCATGGTACAGTTA 61.223 44.000 12.58 0.00 42.97 2.24
554 555 7.488992 TGGAAGTCAGTCCATGGTACAGTTAT 61.489 42.308 12.58 0.00 42.97 1.89
555 556 8.895931 TGGAAGTCAGTCCATGGTACAGTTATT 61.896 40.741 12.58 0.00 42.97 1.40
565 566 5.950758 TGGTACAGTTATTGCAAACGATT 57.049 34.783 1.71 0.00 34.46 3.34
567 568 7.436430 TGGTACAGTTATTGCAAACGATTAA 57.564 32.000 1.71 0.00 34.46 1.40
568 569 7.523219 TGGTACAGTTATTGCAAACGATTAAG 58.477 34.615 1.71 0.00 34.46 1.85
569 570 7.388224 TGGTACAGTTATTGCAAACGATTAAGA 59.612 33.333 1.71 0.00 34.46 2.10
570 571 8.231837 GGTACAGTTATTGCAAACGATTAAGAA 58.768 33.333 1.71 0.00 34.46 2.52
571 572 9.262472 GTACAGTTATTGCAAACGATTAAGAAG 57.738 33.333 1.71 0.00 34.46 2.85
572 573 7.871853 ACAGTTATTGCAAACGATTAAGAAGT 58.128 30.769 1.71 0.00 34.46 3.01
573 574 8.349983 ACAGTTATTGCAAACGATTAAGAAGTT 58.650 29.630 1.71 0.00 34.46 2.66
574 575 9.180678 CAGTTATTGCAAACGATTAAGAAGTTT 57.819 29.630 1.71 1.43 38.46 2.66
575 576 9.394477 AGTTATTGCAAACGATTAAGAAGTTTC 57.606 29.630 1.71 0.00 36.12 2.78
576 577 8.635983 GTTATTGCAAACGATTAAGAAGTTTCC 58.364 33.333 1.71 0.00 36.12 3.13
577 578 5.759506 TGCAAACGATTAAGAAGTTTCCA 57.240 34.783 0.00 0.00 36.12 3.53
578 579 5.757886 TGCAAACGATTAAGAAGTTTCCAG 58.242 37.500 0.00 0.00 36.12 3.86
579 580 5.154222 GCAAACGATTAAGAAGTTTCCAGG 58.846 41.667 0.00 0.00 36.12 4.45
580 581 5.278315 GCAAACGATTAAGAAGTTTCCAGGT 60.278 40.000 0.00 0.00 36.12 4.00
581 582 6.072893 GCAAACGATTAAGAAGTTTCCAGGTA 60.073 38.462 0.00 0.00 36.12 3.08
582 583 7.295930 CAAACGATTAAGAAGTTTCCAGGTAC 58.704 38.462 0.00 0.00 36.12 3.34
583 584 6.356186 ACGATTAAGAAGTTTCCAGGTACT 57.644 37.500 0.00 0.00 43.88 2.73
584 585 7.472334 ACGATTAAGAAGTTTCCAGGTACTA 57.528 36.000 0.00 0.00 36.02 1.82
585 586 7.899973 ACGATTAAGAAGTTTCCAGGTACTAA 58.100 34.615 0.00 0.00 36.02 2.24
586 587 7.816513 ACGATTAAGAAGTTTCCAGGTACTAAC 59.183 37.037 0.00 0.00 36.02 2.34
587 588 8.033626 CGATTAAGAAGTTTCCAGGTACTAACT 58.966 37.037 0.00 0.00 36.45 2.24
588 589 9.152595 GATTAAGAAGTTTCCAGGTACTAACTG 57.847 37.037 0.00 0.00 35.27 3.16
589 590 6.496144 AAGAAGTTTCCAGGTACTAACTGT 57.504 37.500 0.37 0.00 35.27 3.55
590 591 5.855045 AGAAGTTTCCAGGTACTAACTGTG 58.145 41.667 0.37 0.00 35.27 3.66
591 592 4.004196 AGTTTCCAGGTACTAACTGTGC 57.996 45.455 0.37 0.00 33.98 4.57
592 593 2.735134 GTTTCCAGGTACTAACTGTGCG 59.265 50.000 0.37 0.00 36.02 5.34
593 594 1.913778 TCCAGGTACTAACTGTGCGA 58.086 50.000 0.37 0.00 36.02 5.10
594 595 1.816835 TCCAGGTACTAACTGTGCGAG 59.183 52.381 0.37 0.00 36.02 5.03
595 596 1.630148 CAGGTACTAACTGTGCGAGC 58.370 55.000 0.00 0.00 36.02 5.03
596 597 1.067846 CAGGTACTAACTGTGCGAGCA 60.068 52.381 0.00 0.00 36.02 4.26
597 598 1.067776 AGGTACTAACTGTGCGAGCAC 60.068 52.381 20.14 20.14 42.17 4.40
598 599 3.657476 AGGTACTAACTGTGCGAGCACA 61.657 50.000 26.45 26.45 46.82 4.57
599 600 5.704874 AGGTACTAACTGTGCGAGCACAC 62.705 52.174 24.87 13.98 45.06 3.82
1234 1346 6.136857 TGTAAGCTAGGGTTCATCTCTGTAT 58.863 40.000 0.00 0.00 0.00 2.29
1318 1448 2.104622 TCTGGTGTTGAGTGCAGATTGA 59.895 45.455 0.00 0.00 0.00 2.57
1776 1908 2.031120 CCTTGGCCAACTGTTCTTCAA 58.969 47.619 16.05 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.958180 TCCTGAATGAGATAAAACAAGATGTTA 57.042 29.630 0.00 0.00 40.14 2.41
8 9 8.868522 TCCTGAATGAGATAAAACAAGATGTT 57.131 30.769 0.00 0.00 43.41 2.71
9 10 7.066766 GCTCCTGAATGAGATAAAACAAGATGT 59.933 37.037 0.00 0.00 34.11 3.06
10 11 7.416022 GCTCCTGAATGAGATAAAACAAGATG 58.584 38.462 0.00 0.00 34.11 2.90
11 12 6.545298 GGCTCCTGAATGAGATAAAACAAGAT 59.455 38.462 0.00 0.00 34.11 2.40
12 13 5.882557 GGCTCCTGAATGAGATAAAACAAGA 59.117 40.000 0.00 0.00 34.11 3.02
13 14 5.884792 AGGCTCCTGAATGAGATAAAACAAG 59.115 40.000 0.00 0.00 34.11 3.16
14 15 5.649395 CAGGCTCCTGAATGAGATAAAACAA 59.351 40.000 10.33 0.00 46.30 2.83
15 16 5.188434 CAGGCTCCTGAATGAGATAAAACA 58.812 41.667 10.33 0.00 46.30 2.83
16 17 4.578105 CCAGGCTCCTGAATGAGATAAAAC 59.422 45.833 17.08 0.00 46.30 2.43
17 18 4.785301 CCAGGCTCCTGAATGAGATAAAA 58.215 43.478 17.08 0.00 46.30 1.52
18 19 3.434167 GCCAGGCTCCTGAATGAGATAAA 60.434 47.826 17.08 0.00 46.30 1.40
19 20 2.105477 GCCAGGCTCCTGAATGAGATAA 59.895 50.000 17.08 0.00 46.30 1.75
20 21 1.696336 GCCAGGCTCCTGAATGAGATA 59.304 52.381 17.08 0.00 46.30 1.98
21 22 0.473326 GCCAGGCTCCTGAATGAGAT 59.527 55.000 17.08 0.00 46.30 2.75
22 23 1.910722 GCCAGGCTCCTGAATGAGA 59.089 57.895 17.08 0.00 46.30 3.27
23 24 1.523258 CGCCAGGCTCCTGAATGAG 60.523 63.158 17.08 1.52 46.30 2.90
24 25 2.293318 ACGCCAGGCTCCTGAATGA 61.293 57.895 17.08 0.00 46.30 2.57
25 26 2.110967 CACGCCAGGCTCCTGAATG 61.111 63.158 17.08 8.23 46.30 2.67
26 27 2.270205 CACGCCAGGCTCCTGAAT 59.730 61.111 17.08 0.00 46.30 2.57
27 28 4.704833 GCACGCCAGGCTCCTGAA 62.705 66.667 17.08 0.00 46.30 3.02
50 51 4.426313 AGCACCGGCCCCTTTAGC 62.426 66.667 0.00 0.00 42.56 3.09
51 52 2.124695 GAGCACCGGCCCCTTTAG 60.125 66.667 0.00 0.00 42.56 1.85
52 53 3.723922 GGAGCACCGGCCCCTTTA 61.724 66.667 0.00 0.00 42.56 1.85
57 58 4.554036 GATCAGGAGCACCGGCCC 62.554 72.222 0.00 0.00 42.56 5.80
58 59 4.899239 CGATCAGGAGCACCGGCC 62.899 72.222 0.00 0.00 42.56 6.13
60 61 4.899239 GGCGATCAGGAGCACCGG 62.899 72.222 0.00 0.00 41.83 5.28
61 62 3.451556 ATGGCGATCAGGAGCACCG 62.452 63.158 0.00 0.00 41.83 4.94
62 63 1.890979 CATGGCGATCAGGAGCACC 60.891 63.158 0.00 0.00 34.54 5.01
63 64 0.879400 CTCATGGCGATCAGGAGCAC 60.879 60.000 7.67 0.00 45.48 4.40
64 65 1.444672 CTCATGGCGATCAGGAGCA 59.555 57.895 7.67 0.00 45.48 4.26
65 66 4.357699 CTCATGGCGATCAGGAGC 57.642 61.111 7.67 0.00 45.48 4.70
67 68 1.689243 CCACCTCATGGCGATCAGGA 61.689 60.000 5.44 0.00 43.24 3.86
68 69 1.227764 CCACCTCATGGCGATCAGG 60.228 63.158 0.00 0.00 43.24 3.86
69 70 4.451241 CCACCTCATGGCGATCAG 57.549 61.111 0.00 0.00 43.24 2.90
92 93 4.082523 ACGGACGACATGGCCAGG 62.083 66.667 17.55 17.55 0.00 4.45
93 94 2.815211 CACGGACGACATGGCCAG 60.815 66.667 13.05 6.08 0.00 4.85
94 95 3.295304 CTCACGGACGACATGGCCA 62.295 63.158 8.56 8.56 0.00 5.36
95 96 2.509336 CTCACGGACGACATGGCC 60.509 66.667 0.00 0.00 0.00 5.36
96 97 1.517257 CTCTCACGGACGACATGGC 60.517 63.158 0.00 0.00 0.00 4.40
97 98 1.139734 CCTCTCACGGACGACATGG 59.860 63.158 0.00 0.00 0.00 3.66
98 99 1.517257 GCCTCTCACGGACGACATG 60.517 63.158 0.00 0.00 0.00 3.21
99 100 1.679305 AGCCTCTCACGGACGACAT 60.679 57.895 0.00 0.00 0.00 3.06
100 101 2.282251 AGCCTCTCACGGACGACA 60.282 61.111 0.00 0.00 0.00 4.35
101 102 2.179517 CAGCCTCTCACGGACGAC 59.820 66.667 0.00 0.00 0.00 4.34
102 103 3.749064 GCAGCCTCTCACGGACGA 61.749 66.667 0.00 0.00 0.00 4.20
103 104 3.362399 ATGCAGCCTCTCACGGACG 62.362 63.158 0.00 0.00 0.00 4.79
104 105 1.812922 CATGCAGCCTCTCACGGAC 60.813 63.158 0.00 0.00 0.00 4.79
105 106 2.580815 CATGCAGCCTCTCACGGA 59.419 61.111 0.00 0.00 0.00 4.69
106 107 2.513204 CCATGCAGCCTCTCACGG 60.513 66.667 0.00 0.00 0.00 4.94
107 108 1.812922 GTCCATGCAGCCTCTCACG 60.813 63.158 0.00 0.00 0.00 4.35
108 109 0.107312 ATGTCCATGCAGCCTCTCAC 60.107 55.000 0.00 0.00 0.00 3.51
109 110 0.107361 CATGTCCATGCAGCCTCTCA 60.107 55.000 0.00 0.00 31.39 3.27
110 111 0.818445 CCATGTCCATGCAGCCTCTC 60.818 60.000 1.64 0.00 37.49 3.20
111 112 1.226542 CCATGTCCATGCAGCCTCT 59.773 57.895 1.64 0.00 37.49 3.69
112 113 2.487532 GCCATGTCCATGCAGCCTC 61.488 63.158 1.64 0.00 37.49 4.70
113 114 2.441532 GCCATGTCCATGCAGCCT 60.442 61.111 1.64 0.00 37.49 4.58
114 115 2.292794 CTTGCCATGTCCATGCAGCC 62.293 60.000 1.64 0.00 37.49 4.85
115 116 1.141019 CTTGCCATGTCCATGCAGC 59.859 57.895 1.64 2.23 37.49 5.25
116 117 1.179152 TTCTTGCCATGTCCATGCAG 58.821 50.000 1.64 0.00 37.49 4.41
117 118 1.630223 TTTCTTGCCATGTCCATGCA 58.370 45.000 1.64 0.00 37.49 3.96
118 119 2.613691 CTTTTCTTGCCATGTCCATGC 58.386 47.619 1.64 0.00 37.49 4.06
119 120 2.093869 CCCTTTTCTTGCCATGTCCATG 60.094 50.000 0.14 0.14 38.51 3.66
120 121 2.181975 CCCTTTTCTTGCCATGTCCAT 58.818 47.619 0.00 0.00 0.00 3.41
121 122 1.146774 TCCCTTTTCTTGCCATGTCCA 59.853 47.619 0.00 0.00 0.00 4.02
122 123 1.546029 GTCCCTTTTCTTGCCATGTCC 59.454 52.381 0.00 0.00 0.00 4.02
123 124 1.200020 CGTCCCTTTTCTTGCCATGTC 59.800 52.381 0.00 0.00 0.00 3.06
124 125 1.202879 TCGTCCCTTTTCTTGCCATGT 60.203 47.619 0.00 0.00 0.00 3.21
125 126 1.470098 CTCGTCCCTTTTCTTGCCATG 59.530 52.381 0.00 0.00 0.00 3.66
126 127 1.614317 CCTCGTCCCTTTTCTTGCCAT 60.614 52.381 0.00 0.00 0.00 4.40
127 128 0.250727 CCTCGTCCCTTTTCTTGCCA 60.251 55.000 0.00 0.00 0.00 4.92
128 129 0.036306 TCCTCGTCCCTTTTCTTGCC 59.964 55.000 0.00 0.00 0.00 4.52
129 130 1.807142 CTTCCTCGTCCCTTTTCTTGC 59.193 52.381 0.00 0.00 0.00 4.01
130 131 2.427506 CCTTCCTCGTCCCTTTTCTTG 58.572 52.381 0.00 0.00 0.00 3.02
131 132 1.271434 GCCTTCCTCGTCCCTTTTCTT 60.271 52.381 0.00 0.00 0.00 2.52
132 133 0.325272 GCCTTCCTCGTCCCTTTTCT 59.675 55.000 0.00 0.00 0.00 2.52
133 134 0.677098 GGCCTTCCTCGTCCCTTTTC 60.677 60.000 0.00 0.00 0.00 2.29
134 135 1.379146 GGCCTTCCTCGTCCCTTTT 59.621 57.895 0.00 0.00 0.00 2.27
135 136 2.955881 CGGCCTTCCTCGTCCCTTT 61.956 63.158 0.00 0.00 0.00 3.11
136 137 3.391382 CGGCCTTCCTCGTCCCTT 61.391 66.667 0.00 0.00 0.00 3.95
137 138 4.698625 ACGGCCTTCCTCGTCCCT 62.699 66.667 0.00 0.00 34.20 4.20
138 139 4.452733 CACGGCCTTCCTCGTCCC 62.453 72.222 0.00 0.00 37.53 4.46
139 140 2.722201 ATCACGGCCTTCCTCGTCC 61.722 63.158 0.00 0.00 37.53 4.79
140 141 1.519455 CATCACGGCCTTCCTCGTC 60.519 63.158 0.00 0.00 37.53 4.20
141 142 2.579201 CATCACGGCCTTCCTCGT 59.421 61.111 0.00 0.00 40.49 4.18
142 143 2.202932 CCATCACGGCCTTCCTCG 60.203 66.667 0.00 0.00 0.00 4.63
151 152 1.153289 CTCTTCCTGGCCATCACGG 60.153 63.158 5.51 3.56 38.11 4.94
152 153 1.153289 CCTCTTCCTGGCCATCACG 60.153 63.158 5.51 0.00 0.00 4.35
153 154 0.179936 CTCCTCTTCCTGGCCATCAC 59.820 60.000 5.51 0.00 0.00 3.06
154 155 0.984961 CCTCCTCTTCCTGGCCATCA 60.985 60.000 5.51 0.00 0.00 3.07
155 156 0.985490 ACCTCCTCTTCCTGGCCATC 60.985 60.000 5.51 0.00 0.00 3.51
156 157 1.083706 ACCTCCTCTTCCTGGCCAT 59.916 57.895 5.51 0.00 0.00 4.40
157 158 1.920325 CACCTCCTCTTCCTGGCCA 60.920 63.158 4.71 4.71 0.00 5.36
158 159 2.993853 CACCTCCTCTTCCTGGCC 59.006 66.667 0.00 0.00 0.00 5.36
159 160 1.919600 ATGCACCTCCTCTTCCTGGC 61.920 60.000 0.00 0.00 0.00 4.85
160 161 0.107312 CATGCACCTCCTCTTCCTGG 60.107 60.000 0.00 0.00 0.00 4.45
161 162 0.107312 CCATGCACCTCCTCTTCCTG 60.107 60.000 0.00 0.00 0.00 3.86
162 163 1.277580 CCCATGCACCTCCTCTTCCT 61.278 60.000 0.00 0.00 0.00 3.36
163 164 1.225704 CCCATGCACCTCCTCTTCC 59.774 63.158 0.00 0.00 0.00 3.46
164 165 0.393537 CACCCATGCACCTCCTCTTC 60.394 60.000 0.00 0.00 0.00 2.87
165 166 1.136329 ACACCCATGCACCTCCTCTT 61.136 55.000 0.00 0.00 0.00 2.85
166 167 1.539869 ACACCCATGCACCTCCTCT 60.540 57.895 0.00 0.00 0.00 3.69
167 168 1.377725 CACACCCATGCACCTCCTC 60.378 63.158 0.00 0.00 0.00 3.71
168 169 1.210204 ATCACACCCATGCACCTCCT 61.210 55.000 0.00 0.00 0.00 3.69
169 170 0.323725 AATCACACCCATGCACCTCC 60.324 55.000 0.00 0.00 0.00 4.30
170 171 0.813184 CAATCACACCCATGCACCTC 59.187 55.000 0.00 0.00 0.00 3.85
171 172 0.112995 ACAATCACACCCATGCACCT 59.887 50.000 0.00 0.00 0.00 4.00
172 173 0.244450 CACAATCACACCCATGCACC 59.756 55.000 0.00 0.00 0.00 5.01
173 174 1.246649 TCACAATCACACCCATGCAC 58.753 50.000 0.00 0.00 0.00 4.57
174 175 1.612950 GTTCACAATCACACCCATGCA 59.387 47.619 0.00 0.00 0.00 3.96
175 176 1.612950 TGTTCACAATCACACCCATGC 59.387 47.619 0.00 0.00 0.00 4.06
176 177 2.886523 ACTGTTCACAATCACACCCATG 59.113 45.455 0.00 0.00 0.00 3.66
177 178 3.228188 ACTGTTCACAATCACACCCAT 57.772 42.857 0.00 0.00 0.00 4.00
178 179 2.727123 ACTGTTCACAATCACACCCA 57.273 45.000 0.00 0.00 0.00 4.51
179 180 3.130340 ACAAACTGTTCACAATCACACCC 59.870 43.478 0.00 0.00 0.00 4.61
180 181 4.104776 CACAAACTGTTCACAATCACACC 58.895 43.478 0.00 0.00 0.00 4.16
181 182 4.980590 TCACAAACTGTTCACAATCACAC 58.019 39.130 0.00 0.00 0.00 3.82
182 183 5.833406 ATCACAAACTGTTCACAATCACA 57.167 34.783 0.00 0.00 0.00 3.58
183 184 7.393327 CAAAATCACAAACTGTTCACAATCAC 58.607 34.615 0.00 0.00 0.00 3.06
184 185 6.035866 GCAAAATCACAAACTGTTCACAATCA 59.964 34.615 0.00 0.00 0.00 2.57
185 186 6.413269 GCAAAATCACAAACTGTTCACAATC 58.587 36.000 0.00 0.00 0.00 2.67
186 187 5.294060 GGCAAAATCACAAACTGTTCACAAT 59.706 36.000 0.00 0.00 0.00 2.71
187 188 4.629200 GGCAAAATCACAAACTGTTCACAA 59.371 37.500 0.00 0.00 0.00 3.33
188 189 4.081752 AGGCAAAATCACAAACTGTTCACA 60.082 37.500 0.00 0.00 0.00 3.58
189 190 4.432712 AGGCAAAATCACAAACTGTTCAC 58.567 39.130 0.00 0.00 0.00 3.18
190 191 4.734398 AGGCAAAATCACAAACTGTTCA 57.266 36.364 0.00 0.00 0.00 3.18
191 192 5.222631 CCTAGGCAAAATCACAAACTGTTC 58.777 41.667 0.00 0.00 0.00 3.18
192 193 4.039124 CCCTAGGCAAAATCACAAACTGTT 59.961 41.667 2.05 0.00 0.00 3.16
193 194 3.573967 CCCTAGGCAAAATCACAAACTGT 59.426 43.478 2.05 0.00 0.00 3.55
194 195 3.826157 TCCCTAGGCAAAATCACAAACTG 59.174 43.478 2.05 0.00 0.00 3.16
195 196 4.082125 CTCCCTAGGCAAAATCACAAACT 58.918 43.478 2.05 0.00 0.00 2.66
196 197 3.193479 CCTCCCTAGGCAAAATCACAAAC 59.807 47.826 2.05 0.00 35.64 2.93
197 198 3.075283 TCCTCCCTAGGCAAAATCACAAA 59.925 43.478 2.05 0.00 43.31 2.83
198 199 2.647299 TCCTCCCTAGGCAAAATCACAA 59.353 45.455 2.05 0.00 43.31 3.33
199 200 2.274542 TCCTCCCTAGGCAAAATCACA 58.725 47.619 2.05 0.00 43.31 3.58
200 201 3.117888 TGATCCTCCCTAGGCAAAATCAC 60.118 47.826 2.05 0.00 43.31 3.06
201 202 3.122480 TGATCCTCCCTAGGCAAAATCA 58.878 45.455 2.05 7.11 43.31 2.57
202 203 3.497584 CCTGATCCTCCCTAGGCAAAATC 60.498 52.174 2.05 4.52 43.31 2.17
203 204 2.444766 CCTGATCCTCCCTAGGCAAAAT 59.555 50.000 2.05 0.00 43.31 1.82
204 205 1.846439 CCTGATCCTCCCTAGGCAAAA 59.154 52.381 2.05 0.00 43.31 2.44
205 206 1.511613 CCTGATCCTCCCTAGGCAAA 58.488 55.000 2.05 0.00 43.31 3.68
206 207 0.400525 CCCTGATCCTCCCTAGGCAA 60.401 60.000 2.05 0.00 43.31 4.52
207 208 1.237163 CCCTGATCCTCCCTAGGCA 59.763 63.158 2.05 0.00 43.31 4.75
208 209 2.220586 GCCCTGATCCTCCCTAGGC 61.221 68.421 2.05 0.00 43.31 3.93
209 210 0.104725 AAGCCCTGATCCTCCCTAGG 60.105 60.000 0.06 0.06 45.21 3.02
210 211 1.696884 GAAAGCCCTGATCCTCCCTAG 59.303 57.143 0.00 0.00 0.00 3.02
211 212 1.295292 AGAAAGCCCTGATCCTCCCTA 59.705 52.381 0.00 0.00 0.00 3.53
212 213 0.045469 AGAAAGCCCTGATCCTCCCT 59.955 55.000 0.00 0.00 0.00 4.20
213 214 0.922626 AAGAAAGCCCTGATCCTCCC 59.077 55.000 0.00 0.00 0.00 4.30
214 215 1.843206 AGAAGAAAGCCCTGATCCTCC 59.157 52.381 0.00 0.00 0.00 4.30
215 216 3.643199 AAGAAGAAAGCCCTGATCCTC 57.357 47.619 0.00 0.00 0.00 3.71
216 217 5.723860 ATAAAGAAGAAAGCCCTGATCCT 57.276 39.130 0.00 0.00 0.00 3.24
217 218 6.000840 CCTATAAAGAAGAAAGCCCTGATCC 58.999 44.000 0.00 0.00 0.00 3.36
218 219 6.000840 CCCTATAAAGAAGAAAGCCCTGATC 58.999 44.000 0.00 0.00 0.00 2.92
219 220 5.672194 TCCCTATAAAGAAGAAAGCCCTGAT 59.328 40.000 0.00 0.00 0.00 2.90
220 221 5.036916 TCCCTATAAAGAAGAAAGCCCTGA 58.963 41.667 0.00 0.00 0.00 3.86
221 222 5.373812 TCCCTATAAAGAAGAAAGCCCTG 57.626 43.478 0.00 0.00 0.00 4.45
222 223 5.492887 ACTTCCCTATAAAGAAGAAAGCCCT 59.507 40.000 15.10 0.00 41.69 5.19
223 224 5.756918 ACTTCCCTATAAAGAAGAAAGCCC 58.243 41.667 15.10 0.00 41.69 5.19
224 225 8.803397 TTTACTTCCCTATAAAGAAGAAAGCC 57.197 34.615 15.10 0.00 41.69 4.35
225 226 9.451002 ACTTTACTTCCCTATAAAGAAGAAAGC 57.549 33.333 15.10 0.00 41.69 3.51
237 238 9.636789 AAACAAACTTACACTTTACTTCCCTAT 57.363 29.630 0.00 0.00 0.00 2.57
238 239 9.465199 AAAACAAACTTACACTTTACTTCCCTA 57.535 29.630 0.00 0.00 0.00 3.53
239 240 7.949690 AAACAAACTTACACTTTACTTCCCT 57.050 32.000 0.00 0.00 0.00 4.20
240 241 7.490079 CCAAAACAAACTTACACTTTACTTCCC 59.510 37.037 0.00 0.00 0.00 3.97
241 242 7.009815 GCCAAAACAAACTTACACTTTACTTCC 59.990 37.037 0.00 0.00 0.00 3.46
242 243 7.542824 TGCCAAAACAAACTTACACTTTACTTC 59.457 33.333 0.00 0.00 0.00 3.01
243 244 7.379750 TGCCAAAACAAACTTACACTTTACTT 58.620 30.769 0.00 0.00 0.00 2.24
244 245 6.926313 TGCCAAAACAAACTTACACTTTACT 58.074 32.000 0.00 0.00 0.00 2.24
245 246 6.237728 GCTGCCAAAACAAACTTACACTTTAC 60.238 38.462 0.00 0.00 0.00 2.01
246 247 5.808030 GCTGCCAAAACAAACTTACACTTTA 59.192 36.000 0.00 0.00 0.00 1.85
247 248 4.629634 GCTGCCAAAACAAACTTACACTTT 59.370 37.500 0.00 0.00 0.00 2.66
248 249 4.180817 GCTGCCAAAACAAACTTACACTT 58.819 39.130 0.00 0.00 0.00 3.16
249 250 3.430236 GGCTGCCAAAACAAACTTACACT 60.430 43.478 15.17 0.00 0.00 3.55
250 251 2.863740 GGCTGCCAAAACAAACTTACAC 59.136 45.455 15.17 0.00 0.00 2.90
251 252 2.497675 TGGCTGCCAAAACAAACTTACA 59.502 40.909 21.08 0.00 0.00 2.41
252 253 3.172229 TGGCTGCCAAAACAAACTTAC 57.828 42.857 21.08 0.00 0.00 2.34
253 254 3.494048 CCATGGCTGCCAAAACAAACTTA 60.494 43.478 27.24 0.00 36.95 2.24
254 255 2.563702 CATGGCTGCCAAAACAAACTT 58.436 42.857 27.24 2.08 36.95 2.66
255 256 1.202675 CCATGGCTGCCAAAACAAACT 60.203 47.619 27.24 2.94 36.95 2.66
256 257 1.202627 TCCATGGCTGCCAAAACAAAC 60.203 47.619 27.24 0.00 36.95 2.93
257 258 1.126488 TCCATGGCTGCCAAAACAAA 58.874 45.000 27.24 5.48 36.95 2.83
258 259 1.350071 ATCCATGGCTGCCAAAACAA 58.650 45.000 27.24 10.09 36.95 2.83
259 260 2.101783 CTATCCATGGCTGCCAAAACA 58.898 47.619 27.24 10.38 36.95 2.83
260 261 1.202452 GCTATCCATGGCTGCCAAAAC 60.202 52.381 27.24 7.41 36.95 2.43
261 262 1.113788 GCTATCCATGGCTGCCAAAA 58.886 50.000 27.24 14.21 36.95 2.44
262 263 0.259647 AGCTATCCATGGCTGCCAAA 59.740 50.000 27.24 14.59 43.33 3.28
263 264 1.072806 CTAGCTATCCATGGCTGCCAA 59.927 52.381 27.24 10.10 44.69 4.52
264 265 0.689055 CTAGCTATCCATGGCTGCCA 59.311 55.000 25.65 25.65 44.69 4.92
265 266 0.689623 ACTAGCTATCCATGGCTGCC 59.310 55.000 12.87 12.87 44.69 4.85
266 267 2.149578 CAACTAGCTATCCATGGCTGC 58.850 52.381 6.96 10.95 44.69 5.25
267 268 3.758755 TCAACTAGCTATCCATGGCTG 57.241 47.619 6.96 0.13 44.69 4.85
268 269 3.495806 GCTTCAACTAGCTATCCATGGCT 60.496 47.826 6.96 0.00 46.73 4.75
269 270 2.810852 GCTTCAACTAGCTATCCATGGC 59.189 50.000 6.96 0.00 38.15 4.40
270 271 3.062763 CGCTTCAACTAGCTATCCATGG 58.937 50.000 4.97 4.97 39.03 3.66
271 272 3.492383 CACGCTTCAACTAGCTATCCATG 59.508 47.826 0.00 0.00 39.03 3.66
272 273 3.384789 TCACGCTTCAACTAGCTATCCAT 59.615 43.478 0.00 0.00 39.03 3.41
273 274 2.758423 TCACGCTTCAACTAGCTATCCA 59.242 45.455 0.00 0.00 39.03 3.41
274 275 3.438297 TCACGCTTCAACTAGCTATCC 57.562 47.619 0.00 0.00 39.03 2.59
275 276 3.799420 CCTTCACGCTTCAACTAGCTATC 59.201 47.826 0.00 0.00 39.03 2.08
276 277 3.447586 TCCTTCACGCTTCAACTAGCTAT 59.552 43.478 0.00 0.00 39.03 2.97
277 278 2.823747 TCCTTCACGCTTCAACTAGCTA 59.176 45.455 0.00 0.00 39.03 3.32
278 279 1.618837 TCCTTCACGCTTCAACTAGCT 59.381 47.619 0.00 0.00 39.03 3.32
279 280 1.996191 CTCCTTCACGCTTCAACTAGC 59.004 52.381 0.00 0.00 37.80 3.42
280 281 2.989840 CACTCCTTCACGCTTCAACTAG 59.010 50.000 0.00 0.00 0.00 2.57
281 282 2.288825 CCACTCCTTCACGCTTCAACTA 60.289 50.000 0.00 0.00 0.00 2.24
282 283 1.541233 CCACTCCTTCACGCTTCAACT 60.541 52.381 0.00 0.00 0.00 3.16
283 284 0.868406 CCACTCCTTCACGCTTCAAC 59.132 55.000 0.00 0.00 0.00 3.18
284 285 0.250295 CCCACTCCTTCACGCTTCAA 60.250 55.000 0.00 0.00 0.00 2.69
285 286 1.118965 TCCCACTCCTTCACGCTTCA 61.119 55.000 0.00 0.00 0.00 3.02
286 287 0.250513 ATCCCACTCCTTCACGCTTC 59.749 55.000 0.00 0.00 0.00 3.86
287 288 0.036010 CATCCCACTCCTTCACGCTT 60.036 55.000 0.00 0.00 0.00 4.68
288 289 0.904865 TCATCCCACTCCTTCACGCT 60.905 55.000 0.00 0.00 0.00 5.07
289 290 0.036388 TTCATCCCACTCCTTCACGC 60.036 55.000 0.00 0.00 0.00 5.34
290 291 1.550524 TCTTCATCCCACTCCTTCACG 59.449 52.381 0.00 0.00 0.00 4.35
291 292 3.703001 TTCTTCATCCCACTCCTTCAC 57.297 47.619 0.00 0.00 0.00 3.18
292 293 3.009473 CCTTTCTTCATCCCACTCCTTCA 59.991 47.826 0.00 0.00 0.00 3.02
293 294 3.009584 ACCTTTCTTCATCCCACTCCTTC 59.990 47.826 0.00 0.00 0.00 3.46
294 295 2.989571 ACCTTTCTTCATCCCACTCCTT 59.010 45.455 0.00 0.00 0.00 3.36
295 296 2.637165 ACCTTTCTTCATCCCACTCCT 58.363 47.619 0.00 0.00 0.00 3.69
296 297 3.084786 CAACCTTTCTTCATCCCACTCC 58.915 50.000 0.00 0.00 0.00 3.85
297 298 3.756117 ACAACCTTTCTTCATCCCACTC 58.244 45.455 0.00 0.00 0.00 3.51
298 299 3.884037 ACAACCTTTCTTCATCCCACT 57.116 42.857 0.00 0.00 0.00 4.00
299 300 4.906618 TCTACAACCTTTCTTCATCCCAC 58.093 43.478 0.00 0.00 0.00 4.61
300 301 5.779241 ATCTACAACCTTTCTTCATCCCA 57.221 39.130 0.00 0.00 0.00 4.37
301 302 7.339482 ACTAATCTACAACCTTTCTTCATCCC 58.661 38.462 0.00 0.00 0.00 3.85
302 303 8.669243 CAACTAATCTACAACCTTTCTTCATCC 58.331 37.037 0.00 0.00 0.00 3.51
303 304 8.669243 CCAACTAATCTACAACCTTTCTTCATC 58.331 37.037 0.00 0.00 0.00 2.92
304 305 7.121315 GCCAACTAATCTACAACCTTTCTTCAT 59.879 37.037 0.00 0.00 0.00 2.57
305 306 6.430000 GCCAACTAATCTACAACCTTTCTTCA 59.570 38.462 0.00 0.00 0.00 3.02
306 307 6.655425 AGCCAACTAATCTACAACCTTTCTTC 59.345 38.462 0.00 0.00 0.00 2.87
307 308 6.543735 AGCCAACTAATCTACAACCTTTCTT 58.456 36.000 0.00 0.00 0.00 2.52
308 309 6.128138 AGCCAACTAATCTACAACCTTTCT 57.872 37.500 0.00 0.00 0.00 2.52
309 310 7.916914 TTAGCCAACTAATCTACAACCTTTC 57.083 36.000 0.00 0.00 33.35 2.62
310 311 7.888546 ACATTAGCCAACTAATCTACAACCTTT 59.111 33.333 0.00 0.00 44.17 3.11
311 312 7.402862 ACATTAGCCAACTAATCTACAACCTT 58.597 34.615 0.00 0.00 44.17 3.50
312 313 6.958767 ACATTAGCCAACTAATCTACAACCT 58.041 36.000 0.00 0.00 44.17 3.50
313 314 7.120726 ACAACATTAGCCAACTAATCTACAACC 59.879 37.037 0.00 0.00 44.17 3.77
314 315 7.962918 CACAACATTAGCCAACTAATCTACAAC 59.037 37.037 0.00 0.00 44.17 3.32
315 316 7.120579 CCACAACATTAGCCAACTAATCTACAA 59.879 37.037 0.00 0.00 44.17 2.41
316 317 6.597672 CCACAACATTAGCCAACTAATCTACA 59.402 38.462 0.00 0.00 44.17 2.74
317 318 6.821665 TCCACAACATTAGCCAACTAATCTAC 59.178 38.462 0.00 0.00 44.17 2.59
318 319 6.953101 TCCACAACATTAGCCAACTAATCTA 58.047 36.000 0.00 0.00 44.17 1.98
319 320 5.815581 TCCACAACATTAGCCAACTAATCT 58.184 37.500 0.00 0.00 44.17 2.40
320 321 5.066505 CCTCCACAACATTAGCCAACTAATC 59.933 44.000 0.00 0.00 44.17 1.75
322 323 4.331968 CCTCCACAACATTAGCCAACTAA 58.668 43.478 0.00 0.00 42.47 2.24
323 324 3.872240 GCCTCCACAACATTAGCCAACTA 60.872 47.826 0.00 0.00 0.00 2.24
324 325 2.795329 CCTCCACAACATTAGCCAACT 58.205 47.619 0.00 0.00 0.00 3.16
325 326 1.202348 GCCTCCACAACATTAGCCAAC 59.798 52.381 0.00 0.00 0.00 3.77
326 327 1.075374 AGCCTCCACAACATTAGCCAA 59.925 47.619 0.00 0.00 0.00 4.52
327 328 0.698238 AGCCTCCACAACATTAGCCA 59.302 50.000 0.00 0.00 0.00 4.75
328 329 1.474077 CAAGCCTCCACAACATTAGCC 59.526 52.381 0.00 0.00 0.00 3.93
329 330 2.162681 ACAAGCCTCCACAACATTAGC 58.837 47.619 0.00 0.00 0.00 3.09
330 331 4.579869 ACTACAAGCCTCCACAACATTAG 58.420 43.478 0.00 0.00 0.00 1.73
331 332 4.575885 GACTACAAGCCTCCACAACATTA 58.424 43.478 0.00 0.00 0.00 1.90
332 333 3.412386 GACTACAAGCCTCCACAACATT 58.588 45.455 0.00 0.00 0.00 2.71
333 334 2.612972 CGACTACAAGCCTCCACAACAT 60.613 50.000 0.00 0.00 0.00 2.71
334 335 1.270094 CGACTACAAGCCTCCACAACA 60.270 52.381 0.00 0.00 0.00 3.33
335 336 1.429463 CGACTACAAGCCTCCACAAC 58.571 55.000 0.00 0.00 0.00 3.32
336 337 0.320374 CCGACTACAAGCCTCCACAA 59.680 55.000 0.00 0.00 0.00 3.33
337 338 1.541310 CCCGACTACAAGCCTCCACA 61.541 60.000 0.00 0.00 0.00 4.17
338 339 1.218316 CCCGACTACAAGCCTCCAC 59.782 63.158 0.00 0.00 0.00 4.02
339 340 1.987855 CCCCGACTACAAGCCTCCA 60.988 63.158 0.00 0.00 0.00 3.86
340 341 2.732619 CCCCCGACTACAAGCCTCC 61.733 68.421 0.00 0.00 0.00 4.30
341 342 2.901042 CCCCCGACTACAAGCCTC 59.099 66.667 0.00 0.00 0.00 4.70
342 343 3.400054 GCCCCCGACTACAAGCCT 61.400 66.667 0.00 0.00 0.00 4.58
343 344 2.757980 TTTGCCCCCGACTACAAGCC 62.758 60.000 0.00 0.00 0.00 4.35
344 345 0.679960 ATTTGCCCCCGACTACAAGC 60.680 55.000 0.00 0.00 0.00 4.01
345 346 2.561569 CTATTTGCCCCCGACTACAAG 58.438 52.381 0.00 0.00 0.00 3.16
346 347 1.407712 GCTATTTGCCCCCGACTACAA 60.408 52.381 0.00 0.00 35.15 2.41
347 348 0.179468 GCTATTTGCCCCCGACTACA 59.821 55.000 0.00 0.00 35.15 2.74
348 349 0.468648 AGCTATTTGCCCCCGACTAC 59.531 55.000 0.00 0.00 44.23 2.73
349 350 0.756903 GAGCTATTTGCCCCCGACTA 59.243 55.000 0.00 0.00 44.23 2.59
350 351 1.527370 GAGCTATTTGCCCCCGACT 59.473 57.895 0.00 0.00 44.23 4.18
351 352 1.526225 GGAGCTATTTGCCCCCGAC 60.526 63.158 0.00 0.00 44.23 4.79
352 353 1.692749 AGGAGCTATTTGCCCCCGA 60.693 57.895 0.00 0.00 40.87 5.14
353 354 1.526917 CAGGAGCTATTTGCCCCCG 60.527 63.158 0.00 0.00 40.87 5.73
354 355 0.753111 CACAGGAGCTATTTGCCCCC 60.753 60.000 0.00 0.00 40.87 5.40
355 356 0.034089 ACACAGGAGCTATTTGCCCC 60.034 55.000 0.00 0.00 44.23 5.80
356 357 1.098050 CACACAGGAGCTATTTGCCC 58.902 55.000 0.00 0.00 44.23 5.36
357 358 0.453390 GCACACAGGAGCTATTTGCC 59.547 55.000 0.00 0.00 44.23 4.52
358 359 1.399791 GAGCACACAGGAGCTATTTGC 59.600 52.381 0.00 0.00 41.23 3.68
359 360 2.676839 CTGAGCACACAGGAGCTATTTG 59.323 50.000 0.00 0.00 41.23 2.32
360 361 2.938756 GCTGAGCACACAGGAGCTATTT 60.939 50.000 0.00 0.00 41.23 1.40
361 362 1.406614 GCTGAGCACACAGGAGCTATT 60.407 52.381 0.00 0.00 41.23 1.73
362 363 0.177604 GCTGAGCACACAGGAGCTAT 59.822 55.000 0.00 0.00 41.23 2.97
363 364 1.593787 GCTGAGCACACAGGAGCTA 59.406 57.895 0.00 0.00 41.23 3.32
364 365 2.346739 GCTGAGCACACAGGAGCT 59.653 61.111 0.00 0.00 43.97 4.09
365 366 3.117171 CGCTGAGCACACAGGAGC 61.117 66.667 4.88 0.00 38.22 4.70
366 367 2.433838 CCGCTGAGCACACAGGAG 60.434 66.667 4.88 0.00 38.22 3.69
367 368 3.226429 GACCGCTGAGCACACAGGA 62.226 63.158 4.88 0.00 38.22 3.86
368 369 2.740055 GACCGCTGAGCACACAGG 60.740 66.667 4.88 0.00 38.22 4.00
369 370 1.159713 TTTGACCGCTGAGCACACAG 61.160 55.000 4.88 0.00 40.43 3.66
370 371 1.153269 TTTGACCGCTGAGCACACA 60.153 52.632 4.88 0.00 0.00 3.72
371 372 0.880278 TCTTTGACCGCTGAGCACAC 60.880 55.000 4.88 0.00 0.00 3.82
372 373 0.179059 TTCTTTGACCGCTGAGCACA 60.179 50.000 4.88 0.00 0.00 4.57
373 374 0.514691 CTTCTTTGACCGCTGAGCAC 59.485 55.000 4.88 0.00 0.00 4.40
374 375 0.392706 TCTTCTTTGACCGCTGAGCA 59.607 50.000 4.88 0.00 0.00 4.26
375 376 0.793250 GTCTTCTTTGACCGCTGAGC 59.207 55.000 0.00 0.00 0.00 4.26
376 377 2.447244 AGTCTTCTTTGACCGCTGAG 57.553 50.000 0.00 0.00 37.66 3.35
377 378 2.910688 AAGTCTTCTTTGACCGCTGA 57.089 45.000 0.00 0.00 37.66 4.26
386 387 6.036577 TCAAAGTTTGCCAAAGTCTTCTTT 57.963 33.333 10.90 0.00 43.66 2.52
387 388 5.418840 TCTCAAAGTTTGCCAAAGTCTTCTT 59.581 36.000 10.90 0.00 35.14 2.52
388 389 4.949856 TCTCAAAGTTTGCCAAAGTCTTCT 59.050 37.500 10.90 0.00 0.00 2.85
389 390 5.163612 ACTCTCAAAGTTTGCCAAAGTCTTC 60.164 40.000 10.90 0.00 33.03 2.87
390 391 4.706962 ACTCTCAAAGTTTGCCAAAGTCTT 59.293 37.500 10.90 0.00 33.03 3.01
391 392 4.273318 ACTCTCAAAGTTTGCCAAAGTCT 58.727 39.130 10.90 0.00 33.03 3.24
392 393 4.639135 ACTCTCAAAGTTTGCCAAAGTC 57.361 40.909 10.90 0.00 33.03 3.01
393 394 4.462483 TCAACTCTCAAAGTTTGCCAAAGT 59.538 37.500 10.90 8.12 46.26 2.66
394 395 4.997565 TCAACTCTCAAAGTTTGCCAAAG 58.002 39.130 10.90 3.40 46.26 2.77
395 396 5.398603 TTCAACTCTCAAAGTTTGCCAAA 57.601 34.783 10.90 0.00 46.26 3.28
396 397 5.398603 TTTCAACTCTCAAAGTTTGCCAA 57.601 34.783 10.90 0.00 46.26 4.52
397 398 5.398603 TTTTCAACTCTCAAAGTTTGCCA 57.601 34.783 10.90 0.00 46.26 4.92
418 419 3.227614 ACGGCAATCACTTACCCTTTTT 58.772 40.909 0.00 0.00 0.00 1.94
419 420 2.871453 ACGGCAATCACTTACCCTTTT 58.129 42.857 0.00 0.00 0.00 2.27
420 421 2.579410 ACGGCAATCACTTACCCTTT 57.421 45.000 0.00 0.00 0.00 3.11
421 422 2.039879 AGAACGGCAATCACTTACCCTT 59.960 45.455 0.00 0.00 0.00 3.95
422 423 1.628846 AGAACGGCAATCACTTACCCT 59.371 47.619 0.00 0.00 0.00 4.34
423 424 2.109425 AGAACGGCAATCACTTACCC 57.891 50.000 0.00 0.00 0.00 3.69
424 425 3.864003 GTCTAGAACGGCAATCACTTACC 59.136 47.826 0.00 0.00 0.00 2.85
425 426 4.745649 AGTCTAGAACGGCAATCACTTAC 58.254 43.478 0.00 0.00 0.00 2.34
426 427 4.438336 CGAGTCTAGAACGGCAATCACTTA 60.438 45.833 11.26 0.00 0.00 2.24
427 428 3.673594 CGAGTCTAGAACGGCAATCACTT 60.674 47.826 11.26 0.00 0.00 3.16
428 429 2.159366 CGAGTCTAGAACGGCAATCACT 60.159 50.000 11.26 0.00 0.00 3.41
429 430 2.186076 CGAGTCTAGAACGGCAATCAC 58.814 52.381 11.26 0.00 0.00 3.06
430 431 1.469251 GCGAGTCTAGAACGGCAATCA 60.469 52.381 17.90 0.00 33.86 2.57
431 432 1.201343 GCGAGTCTAGAACGGCAATC 58.799 55.000 17.90 2.55 33.86 2.67
432 433 3.347411 GCGAGTCTAGAACGGCAAT 57.653 52.632 17.90 0.00 33.86 3.56
433 434 4.883026 GCGAGTCTAGAACGGCAA 57.117 55.556 17.90 0.00 33.86 4.52
435 436 2.278013 CGGCGAGTCTAGAACGGC 60.278 66.667 25.80 25.80 46.14 5.68
436 437 1.352404 CTCGGCGAGTCTAGAACGG 59.648 63.158 27.92 0.00 0.00 4.44
437 438 1.352404 CCTCGGCGAGTCTAGAACG 59.648 63.158 32.41 13.05 0.00 3.95
438 439 0.747283 TCCCTCGGCGAGTCTAGAAC 60.747 60.000 32.41 0.00 0.00 3.01
439 440 0.464013 CTCCCTCGGCGAGTCTAGAA 60.464 60.000 32.41 11.94 0.00 2.10
440 441 1.146485 CTCCCTCGGCGAGTCTAGA 59.854 63.158 32.41 21.74 0.00 2.43
441 442 1.894756 CCTCCCTCGGCGAGTCTAG 60.895 68.421 32.41 24.40 0.00 2.43
442 443 2.192443 CCTCCCTCGGCGAGTCTA 59.808 66.667 32.41 17.53 0.00 2.59
443 444 3.729489 TCCTCCCTCGGCGAGTCT 61.729 66.667 32.41 0.00 0.00 3.24
444 445 3.519930 GTCCTCCCTCGGCGAGTC 61.520 72.222 32.41 13.29 0.00 3.36
445 446 3.587170 AAGTCCTCCCTCGGCGAGT 62.587 63.158 32.41 11.97 0.00 4.18
446 447 2.756283 AAGTCCTCCCTCGGCGAG 60.756 66.667 29.16 29.16 0.00 5.03
447 448 3.068691 CAAGTCCTCCCTCGGCGA 61.069 66.667 10.14 10.14 0.00 5.54
448 449 4.148825 CCAAGTCCTCCCTCGGCG 62.149 72.222 0.00 0.00 0.00 6.46
449 450 1.838073 TTTCCAAGTCCTCCCTCGGC 61.838 60.000 0.00 0.00 0.00 5.54
450 451 0.690762 TTTTCCAAGTCCTCCCTCGG 59.309 55.000 0.00 0.00 0.00 4.63
451 452 1.348036 AGTTTTCCAAGTCCTCCCTCG 59.652 52.381 0.00 0.00 0.00 4.63
452 453 3.510531 AAGTTTTCCAAGTCCTCCCTC 57.489 47.619 0.00 0.00 0.00 4.30
453 454 3.204382 TCAAAGTTTTCCAAGTCCTCCCT 59.796 43.478 0.00 0.00 0.00 4.20
454 455 3.562182 TCAAAGTTTTCCAAGTCCTCCC 58.438 45.455 0.00 0.00 0.00 4.30
455 456 4.461198 TCTCAAAGTTTTCCAAGTCCTCC 58.539 43.478 0.00 0.00 0.00 4.30
456 457 5.126779 ACTCTCAAAGTTTTCCAAGTCCTC 58.873 41.667 0.00 0.00 33.03 3.71
457 458 5.117406 ACTCTCAAAGTTTTCCAAGTCCT 57.883 39.130 0.00 0.00 33.03 3.85
458 459 5.836821 AACTCTCAAAGTTTTCCAAGTCC 57.163 39.130 0.00 0.00 46.26 3.85
469 470 4.464947 CTCCCTTTCCAAACTCTCAAAGT 58.535 43.478 0.00 0.00 41.10 2.66
470 471 3.254411 GCTCCCTTTCCAAACTCTCAAAG 59.746 47.826 0.00 0.00 0.00 2.77
471 472 3.222603 GCTCCCTTTCCAAACTCTCAAA 58.777 45.455 0.00 0.00 0.00 2.69
472 473 2.174639 TGCTCCCTTTCCAAACTCTCAA 59.825 45.455 0.00 0.00 0.00 3.02
473 474 1.774254 TGCTCCCTTTCCAAACTCTCA 59.226 47.619 0.00 0.00 0.00 3.27
474 475 2.568623 TGCTCCCTTTCCAAACTCTC 57.431 50.000 0.00 0.00 0.00 3.20
475 476 2.443255 TCTTGCTCCCTTTCCAAACTCT 59.557 45.455 0.00 0.00 0.00 3.24
476 477 2.816672 CTCTTGCTCCCTTTCCAAACTC 59.183 50.000 0.00 0.00 0.00 3.01
477 478 2.868899 CTCTTGCTCCCTTTCCAAACT 58.131 47.619 0.00 0.00 0.00 2.66
478 479 1.270826 GCTCTTGCTCCCTTTCCAAAC 59.729 52.381 0.00 0.00 36.03 2.93
479 480 1.620822 GCTCTTGCTCCCTTTCCAAA 58.379 50.000 0.00 0.00 36.03 3.28
480 481 3.346426 GCTCTTGCTCCCTTTCCAA 57.654 52.632 0.00 0.00 36.03 3.53
492 493 0.109272 TCTACGACGGCAAGCTCTTG 60.109 55.000 0.00 5.31 43.14 3.02
493 494 0.109226 GTCTACGACGGCAAGCTCTT 60.109 55.000 0.00 0.00 0.00 2.85
494 495 0.961358 AGTCTACGACGGCAAGCTCT 60.961 55.000 0.00 0.00 37.67 4.09
495 496 0.523757 GAGTCTACGACGGCAAGCTC 60.524 60.000 0.00 2.17 37.67 4.09
496 497 1.507174 GAGTCTACGACGGCAAGCT 59.493 57.895 0.00 0.00 37.67 3.74
497 498 1.868251 CGAGTCTACGACGGCAAGC 60.868 63.158 0.00 0.00 37.67 4.01
498 499 1.868251 GCGAGTCTACGACGGCAAG 60.868 63.158 0.00 0.00 37.67 4.01
499 500 2.177531 GCGAGTCTACGACGGCAA 59.822 61.111 0.00 0.00 37.67 4.52
500 501 2.745100 AGCGAGTCTACGACGGCA 60.745 61.111 0.00 0.00 38.58 5.69
501 502 2.249557 TTCAGCGAGTCTACGACGGC 62.250 60.000 0.00 5.38 37.67 5.68
502 503 0.247735 CTTCAGCGAGTCTACGACGG 60.248 60.000 0.00 0.00 37.67 4.79
503 504 0.247735 CCTTCAGCGAGTCTACGACG 60.248 60.000 0.00 0.00 37.67 5.12
504 505 1.062880 CTCCTTCAGCGAGTCTACGAC 59.937 57.143 0.00 0.00 35.09 4.34
505 506 1.370609 CTCCTTCAGCGAGTCTACGA 58.629 55.000 0.00 0.00 35.09 3.43
506 507 0.378962 CCTCCTTCAGCGAGTCTACG 59.621 60.000 0.00 0.00 0.00 3.51
507 508 1.402613 GTCCTCCTTCAGCGAGTCTAC 59.597 57.143 0.00 0.00 0.00 2.59
508 509 1.282447 AGTCCTCCTTCAGCGAGTCTA 59.718 52.381 0.00 0.00 0.00 2.59
509 510 0.039035 AGTCCTCCTTCAGCGAGTCT 59.961 55.000 0.00 0.00 0.00 3.24
510 511 0.892063 AAGTCCTCCTTCAGCGAGTC 59.108 55.000 0.00 0.00 0.00 3.36
511 512 0.605589 CAAGTCCTCCTTCAGCGAGT 59.394 55.000 0.00 0.00 0.00 4.18
512 513 0.108424 CCAAGTCCTCCTTCAGCGAG 60.108 60.000 0.00 0.00 0.00 5.03
513 514 0.541998 TCCAAGTCCTCCTTCAGCGA 60.542 55.000 0.00 0.00 0.00 4.93
514 515 0.321671 TTCCAAGTCCTCCTTCAGCG 59.678 55.000 0.00 0.00 0.00 5.18
515 516 1.349357 ACTTCCAAGTCCTCCTTCAGC 59.651 52.381 0.00 0.00 32.86 4.26
530 531 2.567615 ACTGTACCATGGACTGACTTCC 59.432 50.000 21.47 0.00 36.03 3.46
531 532 3.963428 ACTGTACCATGGACTGACTTC 57.037 47.619 21.47 0.00 0.00 3.01
532 533 6.173339 CAATAACTGTACCATGGACTGACTT 58.827 40.000 21.47 9.67 0.00 3.01
533 534 5.734720 CAATAACTGTACCATGGACTGACT 58.265 41.667 21.47 10.86 0.00 3.41
534 535 4.332819 GCAATAACTGTACCATGGACTGAC 59.667 45.833 21.47 11.02 0.00 3.51
535 536 4.019771 TGCAATAACTGTACCATGGACTGA 60.020 41.667 21.47 0.00 0.00 3.41
536 537 4.260985 TGCAATAACTGTACCATGGACTG 58.739 43.478 21.47 17.23 0.00 3.51
537 538 4.568072 TGCAATAACTGTACCATGGACT 57.432 40.909 21.47 0.00 0.00 3.85
538 539 5.399013 GTTTGCAATAACTGTACCATGGAC 58.601 41.667 21.47 12.84 0.00 4.02
539 540 4.155099 CGTTTGCAATAACTGTACCATGGA 59.845 41.667 21.47 0.00 0.00 3.41
540 541 4.155099 TCGTTTGCAATAACTGTACCATGG 59.845 41.667 11.19 11.19 0.00 3.66
541 542 5.289917 TCGTTTGCAATAACTGTACCATG 57.710 39.130 0.00 0.00 0.00 3.66
542 543 6.509418 AATCGTTTGCAATAACTGTACCAT 57.491 33.333 0.00 0.00 0.00 3.55
543 544 5.950758 AATCGTTTGCAATAACTGTACCA 57.049 34.783 0.00 0.00 0.00 3.25
544 545 7.745015 TCTTAATCGTTTGCAATAACTGTACC 58.255 34.615 0.00 0.00 0.00 3.34
545 546 9.262472 CTTCTTAATCGTTTGCAATAACTGTAC 57.738 33.333 0.00 0.00 0.00 2.90
546 547 8.995220 ACTTCTTAATCGTTTGCAATAACTGTA 58.005 29.630 0.00 0.00 0.00 2.74
547 548 7.871853 ACTTCTTAATCGTTTGCAATAACTGT 58.128 30.769 0.00 0.00 0.00 3.55
548 549 8.728088 AACTTCTTAATCGTTTGCAATAACTG 57.272 30.769 0.00 0.00 0.00 3.16
549 550 9.394477 GAAACTTCTTAATCGTTTGCAATAACT 57.606 29.630 0.00 0.00 31.60 2.24
550 551 8.635983 GGAAACTTCTTAATCGTTTGCAATAAC 58.364 33.333 0.00 0.00 38.38 1.89
551 552 8.353684 TGGAAACTTCTTAATCGTTTGCAATAA 58.646 29.630 0.00 0.00 42.95 1.40
552 553 7.877003 TGGAAACTTCTTAATCGTTTGCAATA 58.123 30.769 0.00 0.00 42.95 1.90
553 554 6.744112 TGGAAACTTCTTAATCGTTTGCAAT 58.256 32.000 0.00 0.00 42.95 3.56
554 555 6.137794 TGGAAACTTCTTAATCGTTTGCAA 57.862 33.333 12.67 0.00 42.95 4.08
555 556 5.278266 CCTGGAAACTTCTTAATCGTTTGCA 60.278 40.000 13.68 13.68 43.42 4.08
556 557 5.154222 CCTGGAAACTTCTTAATCGTTTGC 58.846 41.667 0.00 0.00 38.78 3.68
557 558 6.313744 ACCTGGAAACTTCTTAATCGTTTG 57.686 37.500 0.00 0.00 31.60 2.93
558 559 7.222161 AGTACCTGGAAACTTCTTAATCGTTT 58.778 34.615 0.00 0.00 33.91 3.60
559 560 6.766429 AGTACCTGGAAACTTCTTAATCGTT 58.234 36.000 0.00 0.00 0.00 3.85
560 561 6.356186 AGTACCTGGAAACTTCTTAATCGT 57.644 37.500 0.00 0.00 0.00 3.73
561 562 8.033626 AGTTAGTACCTGGAAACTTCTTAATCG 58.966 37.037 0.00 0.00 0.00 3.34
562 563 9.152595 CAGTTAGTACCTGGAAACTTCTTAATC 57.847 37.037 0.00 0.00 29.93 1.75
563 564 8.657712 ACAGTTAGTACCTGGAAACTTCTTAAT 58.342 33.333 0.00 0.00 34.16 1.40
564 565 7.929785 CACAGTTAGTACCTGGAAACTTCTTAA 59.070 37.037 0.00 0.00 34.16 1.85
565 566 7.439381 CACAGTTAGTACCTGGAAACTTCTTA 58.561 38.462 0.00 0.00 34.16 2.10
566 567 6.289064 CACAGTTAGTACCTGGAAACTTCTT 58.711 40.000 0.00 0.00 34.16 2.52
567 568 5.742255 GCACAGTTAGTACCTGGAAACTTCT 60.742 44.000 0.00 3.65 34.16 2.85
568 569 4.451435 GCACAGTTAGTACCTGGAAACTTC 59.549 45.833 0.00 1.53 34.16 3.01
569 570 4.386711 GCACAGTTAGTACCTGGAAACTT 58.613 43.478 0.00 0.00 34.16 2.66
570 571 3.554337 CGCACAGTTAGTACCTGGAAACT 60.554 47.826 0.00 6.20 34.16 2.66
571 572 2.735134 CGCACAGTTAGTACCTGGAAAC 59.265 50.000 0.00 0.00 34.16 2.78
572 573 2.629137 TCGCACAGTTAGTACCTGGAAA 59.371 45.455 0.00 0.00 34.16 3.13
573 574 2.230508 CTCGCACAGTTAGTACCTGGAA 59.769 50.000 0.00 0.00 34.16 3.53
574 575 1.816835 CTCGCACAGTTAGTACCTGGA 59.183 52.381 0.00 0.00 34.16 3.86
575 576 1.736032 GCTCGCACAGTTAGTACCTGG 60.736 57.143 0.00 0.00 34.16 4.45
576 577 1.067846 TGCTCGCACAGTTAGTACCTG 60.068 52.381 0.00 0.00 36.01 4.00
577 578 1.067776 GTGCTCGCACAGTTAGTACCT 60.068 52.381 16.52 0.00 45.53 3.08
578 579 1.347320 GTGCTCGCACAGTTAGTACC 58.653 55.000 16.52 0.00 45.53 3.34
603 604 9.466497 TCAATTAGGATAGAGAAGTGCAATTTT 57.534 29.630 0.00 0.00 0.00 1.82
604 605 9.118300 CTCAATTAGGATAGAGAAGTGCAATTT 57.882 33.333 0.00 0.00 0.00 1.82
605 606 8.270744 ACTCAATTAGGATAGAGAAGTGCAATT 58.729 33.333 0.00 0.00 32.59 2.32
606 607 7.800092 ACTCAATTAGGATAGAGAAGTGCAAT 58.200 34.615 0.00 0.00 32.59 3.56
607 608 7.187824 ACTCAATTAGGATAGAGAAGTGCAA 57.812 36.000 0.00 0.00 32.59 4.08
608 609 6.798427 ACTCAATTAGGATAGAGAAGTGCA 57.202 37.500 0.00 0.00 32.59 4.57
609 610 9.771534 ATTTACTCAATTAGGATAGAGAAGTGC 57.228 33.333 0.00 0.00 32.59 4.40
1318 1448 7.494298 CCAAAATAACCAGCAAACACTAGTTTT 59.506 33.333 0.00 0.00 45.32 2.43
1776 1908 3.276857 CCATAGCTTGCACAGACATCTT 58.723 45.455 0.00 0.00 0.00 2.40
2874 3301 2.060980 CCGCCTCTAGTGCCCTCTT 61.061 63.158 0.00 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.