Multiple sequence alignment - TraesCS2D01G547200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G547200 chr2D 100.000 4811 0 0 1 4811 623515326 623510516 0.000000e+00 8885.0
1 TraesCS2D01G547200 chr2D 87.783 663 54 14 2798 3442 623505909 623505256 0.000000e+00 750.0
2 TraesCS2D01G547200 chr2D 89.199 537 47 10 3537 4066 623753658 623754190 0.000000e+00 660.0
3 TraesCS2D01G547200 chr2D 88.385 353 32 7 2466 2813 623506290 623505942 2.680000e-112 416.0
4 TraesCS2D01G547200 chr2D 82.692 416 47 13 3439 3845 623505134 623504735 3.560000e-91 346.0
5 TraesCS2D01G547200 chr2D 95.833 120 5 0 2142 2261 585680861 585680980 1.370000e-45 195.0
6 TraesCS2D01G547200 chr2D 91.597 119 9 1 3950 4068 623504345 623504228 3.850000e-36 163.0
7 TraesCS2D01G547200 chr2D 75.731 342 61 16 2461 2799 623354149 623354471 8.340000e-33 152.0
8 TraesCS2D01G547200 chr2D 85.149 101 12 3 4713 4811 562848829 562848928 3.060000e-17 100.0
9 TraesCS2D01G547200 chr2D 83.168 101 17 0 4711 4811 199844038 199844138 5.130000e-15 93.5
10 TraesCS2D01G547200 chr7D 93.463 1805 66 22 2258 4048 534701269 534703035 0.000000e+00 2632.0
11 TraesCS2D01G547200 chr7D 94.199 1224 51 7 901 2112 534699915 534701130 0.000000e+00 1849.0
12 TraesCS2D01G547200 chr7D 86.422 545 57 13 3532 4068 534693673 534693138 8.980000e-162 580.0
13 TraesCS2D01G547200 chr7D 95.000 120 6 0 596 715 534699792 534699911 6.360000e-44 189.0
14 TraesCS2D01G547200 chr7D 90.000 100 6 2 4106 4203 534703326 534703423 5.050000e-25 126.0
15 TraesCS2D01G547200 chr7D 94.805 77 3 1 487 562 534698111 534698187 8.460000e-23 119.0
16 TraesCS2D01G547200 chr7D 94.805 77 3 1 487 562 534698535 534698611 8.460000e-23 119.0
17 TraesCS2D01G547200 chr7D 84.706 85 13 0 2062 2146 534701188 534701272 8.580000e-13 86.1
18 TraesCS2D01G547200 chr2B 94.380 1370 53 12 2258 3609 765548344 765546981 0.000000e+00 2082.0
19 TraesCS2D01G547200 chr2B 91.272 1226 49 18 907 2082 765549590 765548373 0.000000e+00 1618.0
20 TraesCS2D01G547200 chr2B 86.621 882 59 17 3966 4811 765546497 765545639 0.000000e+00 920.0
21 TraesCS2D01G547200 chr2B 86.026 687 62 19 2519 3201 765542072 765541416 0.000000e+00 706.0
22 TraesCS2D01G547200 chr2B 81.386 736 76 29 3322 4042 765541420 765540731 1.180000e-150 544.0
23 TraesCS2D01G547200 chr2B 92.971 313 17 5 3663 3974 765546982 765546674 7.340000e-123 451.0
24 TraesCS2D01G547200 chr2B 89.362 188 11 6 291 476 218950799 218950979 1.350000e-55 228.0
25 TraesCS2D01G547200 chr2B 88.947 190 11 6 291 476 88877270 88877453 4.840000e-55 226.0
26 TraesCS2D01G547200 chr2B 89.375 160 15 2 92 250 765549949 765549791 2.940000e-47 200.0
27 TraesCS2D01G547200 chr2B 93.496 123 8 0 2139 2261 157990694 157990816 2.960000e-42 183.0
28 TraesCS2D01G547200 chr2B 77.574 272 52 6 988 1256 765543344 765543079 6.450000e-34 156.0
29 TraesCS2D01G547200 chr2B 98.684 76 1 0 7 82 765550109 765550034 8.400000e-28 135.0
30 TraesCS2D01G547200 chr2B 86.139 101 12 2 4713 4811 462408993 462408893 1.830000e-19 108.0
31 TraesCS2D01G547200 chr2B 92.424 66 3 2 2094 2158 765548393 765548329 5.130000e-15 93.5
32 TraesCS2D01G547200 chr2B 88.158 76 5 2 1489 1561 765542932 765542858 2.390000e-13 87.9
33 TraesCS2D01G547200 chr2A 88.851 296 29 3 2519 2813 754715792 754715500 1.270000e-95 361.0
34 TraesCS2D01G547200 chr2A 76.453 344 55 18 2461 2799 754454958 754455280 3.850000e-36 163.0
35 TraesCS2D01G547200 chr2A 88.889 117 12 1 2792 2908 754715377 754715262 5.020000e-30 143.0
36 TraesCS2D01G547200 chr2A 83.333 120 17 1 988 1107 754716709 754716593 1.830000e-19 108.0
37 TraesCS2D01G547200 chr5A 92.513 187 10 4 721 904 604946099 604945914 1.030000e-66 265.0
38 TraesCS2D01G547200 chr5A 74.110 309 53 18 2726 3015 595035683 595035983 8.520000e-18 102.0
39 TraesCS2D01G547200 chr5A 85.149 101 13 2 4713 4811 690405634 690405534 8.520000e-18 102.0
40 TraesCS2D01G547200 chr5D 92.432 185 12 2 721 904 108091396 108091579 3.690000e-66 263.0
41 TraesCS2D01G547200 chr5D 91.534 189 12 4 719 904 130661515 130661328 1.720000e-64 257.0
42 TraesCS2D01G547200 chr5D 84.158 101 14 2 4713 4811 543296202 543296102 3.960000e-16 97.1
43 TraesCS2D01G547200 chr5D 83.838 99 14 1 4713 4809 67064752 67064654 5.130000e-15 93.5
44 TraesCS2D01G547200 chr5D 75.532 188 38 6 2834 3015 475568504 475568689 8.580000e-13 86.1
45 TraesCS2D01G547200 chr6D 92.063 189 10 5 720 904 427225263 427225076 1.330000e-65 261.0
46 TraesCS2D01G547200 chr1D 92.432 185 11 3 722 904 360475231 360475414 1.330000e-65 261.0
47 TraesCS2D01G547200 chr1D 91.935 186 11 4 725 907 140112913 140112729 1.720000e-64 257.0
48 TraesCS2D01G547200 chr1D 88.889 189 12 6 291 476 439366892 439367074 1.740000e-54 224.0
49 TraesCS2D01G547200 chr1D 85.106 94 12 2 4713 4804 484447589 484447682 1.430000e-15 95.3
50 TraesCS2D01G547200 chr1D 83.168 101 15 2 4713 4811 26257183 26257283 1.840000e-14 91.6
51 TraesCS2D01G547200 chr7A 91.935 186 11 4 722 904 33354558 33354742 1.720000e-64 257.0
52 TraesCS2D01G547200 chr7A 91.538 130 10 1 2133 2262 214220663 214220791 1.380000e-40 178.0
53 TraesCS2D01G547200 chr4D 92.391 184 8 6 725 904 277419832 277419651 1.720000e-64 257.0
54 TraesCS2D01G547200 chr6A 91.489 188 12 4 720 904 36529563 36529749 6.180000e-64 255.0
55 TraesCS2D01G547200 chr6A 86.047 86 12 0 4726 4811 16651124 16651039 5.130000e-15 93.5
56 TraesCS2D01G547200 chr1A 89.362 188 12 5 291 476 245855529 245855710 3.750000e-56 230.0
57 TraesCS2D01G547200 chr1A 89.655 87 6 3 4713 4797 571861259 571861344 1.830000e-19 108.0
58 TraesCS2D01G547200 chr1A 87.209 86 11 0 4726 4811 580152639 580152554 1.100000e-16 99.0
59 TraesCS2D01G547200 chr1A 86.047 86 12 0 4726 4811 389834355 389834270 5.130000e-15 93.5
60 TraesCS2D01G547200 chr1A 93.878 49 3 0 4728 4776 144560347 144560395 1.860000e-09 75.0
61 TraesCS2D01G547200 chr1A 77.876 113 21 4 4697 4807 485350129 485350019 3.110000e-07 67.6
62 TraesCS2D01G547200 chrUn 88.947 190 11 6 291 476 262008407 262008224 4.840000e-55 226.0
63 TraesCS2D01G547200 chrUn 88.947 190 11 6 291 476 286376879 286376696 4.840000e-55 226.0
64 TraesCS2D01G547200 chrUn 88.947 190 11 6 291 476 416580914 416581097 4.840000e-55 226.0
65 TraesCS2D01G547200 chrUn 86.000 100 13 1 4713 4811 381956021 381955922 6.590000e-19 106.0
66 TraesCS2D01G547200 chr5B 88.947 190 11 6 291 476 279512451 279512634 4.840000e-55 226.0
67 TraesCS2D01G547200 chr5B 88.947 190 11 6 291 476 695452922 695452739 4.840000e-55 226.0
68 TraesCS2D01G547200 chr5B 75.532 188 38 6 2834 3015 582973647 582973832 8.580000e-13 86.1
69 TraesCS2D01G547200 chr3D 93.798 129 8 0 2136 2264 607000663 607000535 1.370000e-45 195.0
70 TraesCS2D01G547200 chr3D 90.909 132 12 0 2135 2266 30308034 30307903 1.380000e-40 178.0
71 TraesCS2D01G547200 chr3D 86.000 100 13 1 4713 4811 141779093 141779192 6.590000e-19 106.0
72 TraesCS2D01G547200 chr3D 87.059 85 11 0 4727 4811 100180444 100180360 3.960000e-16 97.1
73 TraesCS2D01G547200 chr3B 93.600 125 8 0 2139 2263 622092907 622092783 2.290000e-43 187.0
74 TraesCS2D01G547200 chr3B 94.215 121 7 0 2141 2261 483569893 483569773 8.220000e-43 185.0
75 TraesCS2D01G547200 chr4A 93.600 125 7 1 2139 2262 208112371 208112247 8.220000e-43 185.0
76 TraesCS2D01G547200 chr1B 92.969 128 8 1 2135 2262 611773174 611773048 8.220000e-43 185.0
77 TraesCS2D01G547200 chr3A 88.119 101 10 2 4713 4811 379841627 379841527 8.460000e-23 119.0
78 TraesCS2D01G547200 chr4B 85.149 101 13 2 4713 4811 416644035 416643935 8.520000e-18 102.0
79 TraesCS2D01G547200 chr4B 84.694 98 13 2 4713 4808 15617443 15617540 3.960000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G547200 chr2D 623510516 623515326 4810 True 8885.000000 8885 100.000000 1 4811 1 chr2D.!!$R1 4810
1 TraesCS2D01G547200 chr2D 623753658 623754190 532 False 660.000000 660 89.199000 3537 4066 1 chr2D.!!$F5 529
2 TraesCS2D01G547200 chr2D 623504228 623506290 2062 True 418.750000 750 87.614250 2466 4068 4 chr2D.!!$R2 1602
3 TraesCS2D01G547200 chr7D 534698111 534703423 5312 False 731.442857 2632 92.425429 487 4203 7 chr7D.!!$F1 3716
4 TraesCS2D01G547200 chr7D 534693138 534693673 535 True 580.000000 580 86.422000 3532 4068 1 chr7D.!!$R1 536
5 TraesCS2D01G547200 chr2B 765540731 765550109 9378 True 635.763636 2082 88.988273 7 4811 11 chr2B.!!$R2 4804
6 TraesCS2D01G547200 chr2A 754715262 754716709 1447 True 204.000000 361 87.024333 988 2908 3 chr2A.!!$R1 1920

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
807 2033 0.109913 AGAAACCAAACGGGAGGGAC 59.890 55.0 0.00 0.00 41.15 4.46 F
1603 2885 0.035820 GGACACGGTTATGGCCTCAA 60.036 55.0 3.32 0.00 45.39 3.02 F
2257 3882 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.0 13.64 4.95 46.06 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2238 3863 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 R
3044 4827 0.534203 GGCAGAAACAGGTGACCGAA 60.534 55.000 0.00 0.0 0.00 4.30 R
4254 6958 1.129251 CACAACATGCGCCTACTTCAG 59.871 52.381 4.18 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 2.648059 AGGAAGCTTTCGGATGGATTG 58.352 47.619 0.00 0.00 0.00 2.67
82 83 4.871933 AGCTTTCGGATGGATTGTTTTT 57.128 36.364 0.00 0.00 0.00 1.94
84 85 6.339587 AGCTTTCGGATGGATTGTTTTTAA 57.660 33.333 0.00 0.00 0.00 1.52
86 87 7.213678 AGCTTTCGGATGGATTGTTTTTAAAA 58.786 30.769 0.00 0.00 0.00 1.52
89 90 8.894768 TTTCGGATGGATTGTTTTTAAAACAT 57.105 26.923 21.63 12.86 0.00 2.71
299 375 9.939802 TCAGTTAGTTAGATTAGAAAAAGGGTC 57.060 33.333 0.00 0.00 0.00 4.46
304 380 8.208575 AGTTAGATTAGAAAAAGGGTCTGTCT 57.791 34.615 0.00 0.00 0.00 3.41
305 381 9.322769 AGTTAGATTAGAAAAAGGGTCTGTCTA 57.677 33.333 0.00 0.00 0.00 2.59
307 383 7.189079 AGATTAGAAAAAGGGTCTGTCTAGG 57.811 40.000 0.00 0.00 0.00 3.02
308 384 6.960542 AGATTAGAAAAAGGGTCTGTCTAGGA 59.039 38.462 0.00 0.00 0.00 2.94
309 385 4.893829 AGAAAAAGGGTCTGTCTAGGAC 57.106 45.455 0.00 0.00 0.00 3.85
310 386 4.232091 AGAAAAAGGGTCTGTCTAGGACA 58.768 43.478 0.43 0.43 40.50 4.02
316 392 3.528078 AGGGTCTGTCTAGGACACATCTA 59.472 47.826 3.18 0.00 39.36 1.98
319 395 5.381757 GGTCTGTCTAGGACACATCTAGAT 58.618 45.833 0.00 0.00 43.25 1.98
321 397 7.172342 GGTCTGTCTAGGACACATCTAGATAT 58.828 42.308 4.54 0.00 43.25 1.63
323 399 7.663905 GTCTGTCTAGGACACATCTAGATATGT 59.336 40.741 16.46 16.46 43.25 2.29
325 401 7.518188 TGTCTAGGACACATCTAGATATGTCA 58.482 38.462 33.92 20.08 44.66 3.58
326 402 7.445707 TGTCTAGGACACATCTAGATATGTCAC 59.554 40.741 33.92 25.94 44.66 3.67
327 403 7.445707 GTCTAGGACACATCTAGATATGTCACA 59.554 40.741 33.92 23.42 44.66 3.58
328 404 8.166726 TCTAGGACACATCTAGATATGTCACAT 58.833 37.037 33.92 24.39 44.66 3.21
329 405 7.225784 AGGACACATCTAGATATGTCACATC 57.774 40.000 33.92 21.71 44.66 3.06
330 406 7.009550 AGGACACATCTAGATATGTCACATCT 58.990 38.462 33.92 23.16 44.66 2.90
331 407 8.166726 AGGACACATCTAGATATGTCACATCTA 58.833 37.037 33.92 0.98 44.66 1.98
332 408 8.797438 GGACACATCTAGATATGTCACATCTAA 58.203 37.037 33.92 0.00 44.66 2.10
334 410 8.580720 ACACATCTAGATATGTCACATCTAACC 58.419 37.037 10.93 0.00 38.01 2.85
335 411 8.801299 CACATCTAGATATGTCACATCTAACCT 58.199 37.037 4.54 0.00 38.01 3.50
336 412 9.019656 ACATCTAGATATGTCACATCTAACCTC 57.980 37.037 4.54 0.00 35.08 3.85
337 413 9.018582 CATCTAGATATGTCACATCTAACCTCA 57.981 37.037 4.54 0.00 35.20 3.86
338 414 9.766754 ATCTAGATATGTCACATCTAACCTCAT 57.233 33.333 2.53 0.00 35.20 2.90
339 415 9.018582 TCTAGATATGTCACATCTAACCTCATG 57.981 37.037 0.00 0.00 35.20 3.07
340 416 7.609097 AGATATGTCACATCTAACCTCATGT 57.391 36.000 0.00 0.00 33.29 3.21
343 419 3.837731 TGTCACATCTAACCTCATGTCCA 59.162 43.478 0.00 0.00 30.48 4.02
344 420 4.184629 GTCACATCTAACCTCATGTCCAC 58.815 47.826 0.00 0.00 30.48 4.02
345 421 4.081420 GTCACATCTAACCTCATGTCCACT 60.081 45.833 0.00 0.00 30.48 4.00
346 422 5.127194 GTCACATCTAACCTCATGTCCACTA 59.873 44.000 0.00 0.00 30.48 2.74
347 423 5.899547 TCACATCTAACCTCATGTCCACTAT 59.100 40.000 0.00 0.00 30.48 2.12
349 425 5.663106 ACATCTAACCTCATGTCCACTATGT 59.337 40.000 0.00 0.00 0.00 2.29
350 426 6.156949 ACATCTAACCTCATGTCCACTATGTT 59.843 38.462 0.00 0.00 0.00 2.71
351 427 6.620877 TCTAACCTCATGTCCACTATGTTT 57.379 37.500 0.00 0.00 0.00 2.83
352 428 6.406370 TCTAACCTCATGTCCACTATGTTTG 58.594 40.000 0.00 0.00 0.00 2.93
353 429 4.640771 ACCTCATGTCCACTATGTTTGT 57.359 40.909 0.00 0.00 0.00 2.83
354 430 4.326826 ACCTCATGTCCACTATGTTTGTG 58.673 43.478 0.00 0.00 35.39 3.33
364 440 6.959639 CCACTATGTTTGTGGCCTATTTAT 57.040 37.500 3.32 0.00 46.73 1.40
365 441 7.346751 CCACTATGTTTGTGGCCTATTTATT 57.653 36.000 3.32 0.00 46.73 1.40
366 442 7.781056 CCACTATGTTTGTGGCCTATTTATTT 58.219 34.615 3.32 0.00 46.73 1.40
367 443 8.257306 CCACTATGTTTGTGGCCTATTTATTTT 58.743 33.333 3.32 0.00 46.73 1.82
372 448 7.787028 TGTTTGTGGCCTATTTATTTTATCCC 58.213 34.615 3.32 0.00 0.00 3.85
373 449 7.400339 TGTTTGTGGCCTATTTATTTTATCCCA 59.600 33.333 3.32 0.00 0.00 4.37
374 450 7.595819 TTGTGGCCTATTTATTTTATCCCAG 57.404 36.000 3.32 0.00 0.00 4.45
375 451 5.538433 TGTGGCCTATTTATTTTATCCCAGC 59.462 40.000 3.32 0.00 0.00 4.85
376 452 5.775195 GTGGCCTATTTATTTTATCCCAGCT 59.225 40.000 3.32 0.00 0.00 4.24
377 453 6.267699 GTGGCCTATTTATTTTATCCCAGCTT 59.732 38.462 3.32 0.00 0.00 3.74
378 454 6.843861 TGGCCTATTTATTTTATCCCAGCTTT 59.156 34.615 3.32 0.00 0.00 3.51
379 455 7.346960 TGGCCTATTTATTTTATCCCAGCTTTT 59.653 33.333 3.32 0.00 0.00 2.27
380 456 8.210946 GGCCTATTTATTTTATCCCAGCTTTTT 58.789 33.333 0.00 0.00 0.00 1.94
400 476 3.325293 TTTTTGTTCCTTGTTGCTGCA 57.675 38.095 0.00 0.00 0.00 4.41
401 477 3.540314 TTTTGTTCCTTGTTGCTGCAT 57.460 38.095 1.84 0.00 0.00 3.96
402 478 3.540314 TTTGTTCCTTGTTGCTGCATT 57.460 38.095 1.84 0.00 0.00 3.56
403 479 4.662468 TTTGTTCCTTGTTGCTGCATTA 57.338 36.364 1.84 0.00 0.00 1.90
404 480 4.870123 TTGTTCCTTGTTGCTGCATTAT 57.130 36.364 1.84 0.00 0.00 1.28
405 481 4.870123 TGTTCCTTGTTGCTGCATTATT 57.130 36.364 1.84 0.00 0.00 1.40
406 482 5.212532 TGTTCCTTGTTGCTGCATTATTT 57.787 34.783 1.84 0.00 0.00 1.40
407 483 4.989797 TGTTCCTTGTTGCTGCATTATTTG 59.010 37.500 1.84 0.00 0.00 2.32
408 484 4.870123 TCCTTGTTGCTGCATTATTTGT 57.130 36.364 1.84 0.00 0.00 2.83
409 485 4.558178 TCCTTGTTGCTGCATTATTTGTG 58.442 39.130 1.84 0.00 0.00 3.33
410 486 3.680937 CCTTGTTGCTGCATTATTTGTGG 59.319 43.478 1.84 0.00 0.00 4.17
411 487 3.316071 TGTTGCTGCATTATTTGTGGG 57.684 42.857 1.84 0.00 0.00 4.61
412 488 2.896044 TGTTGCTGCATTATTTGTGGGA 59.104 40.909 1.84 0.00 0.00 4.37
413 489 3.056678 TGTTGCTGCATTATTTGTGGGAG 60.057 43.478 1.84 0.00 0.00 4.30
414 490 1.477700 TGCTGCATTATTTGTGGGAGC 59.522 47.619 0.00 0.00 0.00 4.70
415 491 1.753073 GCTGCATTATTTGTGGGAGCT 59.247 47.619 0.00 0.00 0.00 4.09
416 492 2.167075 GCTGCATTATTTGTGGGAGCTT 59.833 45.455 0.00 0.00 0.00 3.74
417 493 3.381272 GCTGCATTATTTGTGGGAGCTTA 59.619 43.478 0.00 0.00 0.00 3.09
418 494 4.498682 GCTGCATTATTTGTGGGAGCTTAG 60.499 45.833 0.00 0.00 0.00 2.18
419 495 4.854173 TGCATTATTTGTGGGAGCTTAGA 58.146 39.130 0.00 0.00 0.00 2.10
420 496 5.448654 TGCATTATTTGTGGGAGCTTAGAT 58.551 37.500 0.00 0.00 0.00 1.98
421 497 5.300034 TGCATTATTTGTGGGAGCTTAGATG 59.700 40.000 0.00 0.00 0.00 2.90
422 498 5.300286 GCATTATTTGTGGGAGCTTAGATGT 59.700 40.000 0.00 0.00 0.00 3.06
423 499 6.732154 CATTATTTGTGGGAGCTTAGATGTG 58.268 40.000 0.00 0.00 0.00 3.21
424 500 4.574674 ATTTGTGGGAGCTTAGATGTGA 57.425 40.909 0.00 0.00 0.00 3.58
425 501 3.334583 TTGTGGGAGCTTAGATGTGAC 57.665 47.619 0.00 0.00 0.00 3.67
426 502 2.256306 TGTGGGAGCTTAGATGTGACA 58.744 47.619 0.00 0.00 0.00 3.58
427 503 2.840038 TGTGGGAGCTTAGATGTGACAT 59.160 45.455 0.00 0.00 0.00 3.06
428 504 3.118629 TGTGGGAGCTTAGATGTGACATC 60.119 47.826 17.46 17.46 0.00 3.06
429 505 2.435805 TGGGAGCTTAGATGTGACATCC 59.564 50.000 21.05 6.28 0.00 3.51
430 506 2.703007 GGGAGCTTAGATGTGACATCCT 59.297 50.000 21.05 11.37 0.00 3.24
431 507 3.135530 GGGAGCTTAGATGTGACATCCTT 59.864 47.826 21.05 7.22 0.00 3.36
432 508 4.345257 GGGAGCTTAGATGTGACATCCTTA 59.655 45.833 21.05 6.22 0.00 2.69
433 509 5.293560 GGAGCTTAGATGTGACATCCTTAC 58.706 45.833 21.05 9.59 0.00 2.34
434 510 5.163405 GGAGCTTAGATGTGACATCCTTACA 60.163 44.000 21.05 1.41 0.00 2.41
435 511 6.299805 AGCTTAGATGTGACATCCTTACAA 57.700 37.500 21.05 7.71 0.00 2.41
436 512 6.711277 AGCTTAGATGTGACATCCTTACAAA 58.289 36.000 21.05 6.46 0.00 2.83
437 513 7.168219 AGCTTAGATGTGACATCCTTACAAAA 58.832 34.615 21.05 4.95 0.00 2.44
438 514 7.119846 AGCTTAGATGTGACATCCTTACAAAAC 59.880 37.037 21.05 2.99 0.00 2.43
439 515 7.094805 GCTTAGATGTGACATCCTTACAAAACA 60.095 37.037 21.05 0.00 0.00 2.83
440 516 8.862325 TTAGATGTGACATCCTTACAAAACAT 57.138 30.769 21.05 1.75 0.00 2.71
441 517 7.383102 AGATGTGACATCCTTACAAAACATC 57.617 36.000 21.05 0.00 41.77 3.06
442 518 7.170965 AGATGTGACATCCTTACAAAACATCT 58.829 34.615 21.05 8.71 44.92 2.90
443 519 8.321353 AGATGTGACATCCTTACAAAACATCTA 58.679 33.333 21.05 0.00 46.74 1.98
444 520 7.905604 TGTGACATCCTTACAAAACATCTAG 57.094 36.000 0.00 0.00 0.00 2.43
445 521 7.676004 TGTGACATCCTTACAAAACATCTAGA 58.324 34.615 0.00 0.00 0.00 2.43
446 522 8.321353 TGTGACATCCTTACAAAACATCTAGAT 58.679 33.333 0.00 0.00 0.00 1.98
447 523 8.607459 GTGACATCCTTACAAAACATCTAGATG 58.393 37.037 27.63 27.63 44.15 2.90
464 540 9.376075 CATCTAGATGTGAATTAGACAAACTGT 57.624 33.333 22.42 0.00 34.23 3.55
465 541 9.950496 ATCTAGATGTGAATTAGACAAACTGTT 57.050 29.630 3.89 0.00 0.00 3.16
591 1225 7.992180 AAACAAAGATTGAGTGATTTGTGTC 57.008 32.000 3.20 0.00 43.17 3.67
594 1228 7.198390 ACAAAGATTGAGTGATTTGTGTCAAG 58.802 34.615 1.67 0.00 42.56 3.02
626 1852 6.931281 ACAAAGATCGAGTGATGAGAAGAAAA 59.069 34.615 0.00 0.00 34.09 2.29
691 1917 2.959484 CGGCTGAAGAAGGGCCTGA 61.959 63.158 6.92 0.00 43.29 3.86
715 1941 7.066163 TGACTCGTGTCTCCGTTCTTTTATATA 59.934 37.037 17.64 0.00 43.29 0.86
716 1942 7.938715 ACTCGTGTCTCCGTTCTTTTATATAT 58.061 34.615 0.00 0.00 0.00 0.86
718 1944 9.245962 CTCGTGTCTCCGTTCTTTTATATATTT 57.754 33.333 0.00 0.00 0.00 1.40
719 1945 9.590451 TCGTGTCTCCGTTCTTTTATATATTTT 57.410 29.630 0.00 0.00 0.00 1.82
736 1962 8.980481 ATATATTTTACTCAGGGAGTGTTTGG 57.020 34.615 9.06 0.00 43.30 3.28
737 1963 4.513406 TTTTACTCAGGGAGTGTTTGGT 57.487 40.909 9.06 0.00 43.30 3.67
738 1964 4.513406 TTTACTCAGGGAGTGTTTGGTT 57.487 40.909 9.06 0.00 43.30 3.67
739 1965 2.640316 ACTCAGGGAGTGTTTGGTTC 57.360 50.000 0.00 0.00 41.76 3.62
740 1966 1.843851 ACTCAGGGAGTGTTTGGTTCA 59.156 47.619 0.00 0.00 41.76 3.18
741 1967 2.158755 ACTCAGGGAGTGTTTGGTTCAG 60.159 50.000 0.00 0.00 41.76 3.02
742 1968 1.142870 TCAGGGAGTGTTTGGTTCAGG 59.857 52.381 0.00 0.00 0.00 3.86
743 1969 0.478507 AGGGAGTGTTTGGTTCAGGG 59.521 55.000 0.00 0.00 0.00 4.45
744 1970 0.476771 GGGAGTGTTTGGTTCAGGGA 59.523 55.000 0.00 0.00 0.00 4.20
745 1971 1.605753 GGAGTGTTTGGTTCAGGGAC 58.394 55.000 0.00 0.00 0.00 4.46
746 1972 1.143073 GGAGTGTTTGGTTCAGGGACT 59.857 52.381 0.00 0.00 43.88 3.85
747 1973 2.422945 GGAGTGTTTGGTTCAGGGACTT 60.423 50.000 0.00 0.00 34.60 3.01
748 1974 3.288092 GAGTGTTTGGTTCAGGGACTTT 58.712 45.455 0.00 0.00 34.60 2.66
749 1975 3.699538 GAGTGTTTGGTTCAGGGACTTTT 59.300 43.478 0.00 0.00 34.60 2.27
750 1976 4.093743 AGTGTTTGGTTCAGGGACTTTTT 58.906 39.130 0.00 0.00 34.60 1.94
751 1977 5.265989 AGTGTTTGGTTCAGGGACTTTTTA 58.734 37.500 0.00 0.00 34.60 1.52
752 1978 5.359860 AGTGTTTGGTTCAGGGACTTTTTAG 59.640 40.000 0.00 0.00 34.60 1.85
753 1979 5.126545 GTGTTTGGTTCAGGGACTTTTTAGT 59.873 40.000 0.00 0.00 34.60 2.24
754 1980 5.358725 TGTTTGGTTCAGGGACTTTTTAGTC 59.641 40.000 0.00 0.00 34.60 2.59
774 2000 4.823157 GTCCCAGAGACTAGAAAAAGTCC 58.177 47.826 0.00 0.00 45.86 3.85
775 2001 3.838903 TCCCAGAGACTAGAAAAAGTCCC 59.161 47.826 0.00 0.00 45.86 4.46
776 2002 3.841255 CCCAGAGACTAGAAAAAGTCCCT 59.159 47.826 0.00 0.00 45.86 4.20
777 2003 5.024118 CCCAGAGACTAGAAAAAGTCCCTA 58.976 45.833 0.00 0.00 45.86 3.53
778 2004 5.484290 CCCAGAGACTAGAAAAAGTCCCTAA 59.516 44.000 0.00 0.00 45.86 2.69
779 2005 6.013639 CCCAGAGACTAGAAAAAGTCCCTAAA 60.014 42.308 0.00 0.00 45.86 1.85
780 2006 7.450903 CCAGAGACTAGAAAAAGTCCCTAAAA 58.549 38.462 0.00 0.00 45.86 1.52
781 2007 8.103935 CCAGAGACTAGAAAAAGTCCCTAAAAT 58.896 37.037 0.00 0.00 45.86 1.82
782 2008 8.940952 CAGAGACTAGAAAAAGTCCCTAAAATG 58.059 37.037 0.00 0.00 45.86 2.32
783 2009 8.661345 AGAGACTAGAAAAAGTCCCTAAAATGT 58.339 33.333 0.00 0.00 45.86 2.71
784 2010 8.850007 AGACTAGAAAAAGTCCCTAAAATGTC 57.150 34.615 0.00 0.00 45.86 3.06
785 2011 7.883833 AGACTAGAAAAAGTCCCTAAAATGTCC 59.116 37.037 0.00 0.00 45.86 4.02
786 2012 6.946583 ACTAGAAAAAGTCCCTAAAATGTCCC 59.053 38.462 0.00 0.00 0.00 4.46
787 2013 5.965486 AGAAAAAGTCCCTAAAATGTCCCT 58.035 37.500 0.00 0.00 0.00 4.20
788 2014 7.098845 AGAAAAAGTCCCTAAAATGTCCCTA 57.901 36.000 0.00 0.00 0.00 3.53
789 2015 7.175797 AGAAAAAGTCCCTAAAATGTCCCTAG 58.824 38.462 0.00 0.00 0.00 3.02
790 2016 6.713731 AAAAGTCCCTAAAATGTCCCTAGA 57.286 37.500 0.00 0.00 0.00 2.43
791 2017 6.713731 AAAGTCCCTAAAATGTCCCTAGAA 57.286 37.500 0.00 0.00 0.00 2.10
792 2018 6.713731 AAGTCCCTAAAATGTCCCTAGAAA 57.286 37.500 0.00 0.00 0.00 2.52
793 2019 6.063496 AGTCCCTAAAATGTCCCTAGAAAC 57.937 41.667 0.00 0.00 0.00 2.78
794 2020 5.045066 AGTCCCTAAAATGTCCCTAGAAACC 60.045 44.000 0.00 0.00 0.00 3.27
795 2021 4.853276 TCCCTAAAATGTCCCTAGAAACCA 59.147 41.667 0.00 0.00 0.00 3.67
796 2022 5.313772 TCCCTAAAATGTCCCTAGAAACCAA 59.686 40.000 0.00 0.00 0.00 3.67
797 2023 6.014012 CCCTAAAATGTCCCTAGAAACCAAA 58.986 40.000 0.00 0.00 0.00 3.28
798 2024 6.071560 CCCTAAAATGTCCCTAGAAACCAAAC 60.072 42.308 0.00 0.00 0.00 2.93
799 2025 5.447624 AAAATGTCCCTAGAAACCAAACG 57.552 39.130 0.00 0.00 0.00 3.60
800 2026 2.554370 TGTCCCTAGAAACCAAACGG 57.446 50.000 0.00 0.00 0.00 4.44
801 2027 1.072648 TGTCCCTAGAAACCAAACGGG 59.927 52.381 0.00 0.00 44.81 5.28
802 2028 1.348696 GTCCCTAGAAACCAAACGGGA 59.651 52.381 0.00 0.00 41.15 5.14
803 2029 1.626825 TCCCTAGAAACCAAACGGGAG 59.373 52.381 0.00 0.00 41.15 4.30
804 2030 1.339727 CCCTAGAAACCAAACGGGAGG 60.340 57.143 0.00 0.00 41.15 4.30
805 2031 1.339727 CCTAGAAACCAAACGGGAGGG 60.340 57.143 0.00 0.00 41.15 4.30
806 2032 1.626825 CTAGAAACCAAACGGGAGGGA 59.373 52.381 0.00 0.00 41.15 4.20
807 2033 0.109913 AGAAACCAAACGGGAGGGAC 59.890 55.000 0.00 0.00 41.15 4.46
809 2035 0.554305 AAACCAAACGGGAGGGACTT 59.446 50.000 0.00 0.00 41.55 3.01
810 2036 0.554305 AACCAAACGGGAGGGACTTT 59.446 50.000 0.00 0.00 41.55 2.66
811 2037 0.554305 ACCAAACGGGAGGGACTTTT 59.446 50.000 0.00 0.00 41.55 2.27
812 2038 1.063492 ACCAAACGGGAGGGACTTTTT 60.063 47.619 0.00 0.00 41.55 1.94
889 2115 8.800231 GACTAGAAAAAGTCGTAAAGAGTTCT 57.200 34.615 0.00 0.00 41.41 3.01
890 2116 8.576936 ACTAGAAAAAGTCGTAAAGAGTTCTG 57.423 34.615 0.00 0.00 41.41 3.02
891 2117 8.411683 ACTAGAAAAAGTCGTAAAGAGTTCTGA 58.588 33.333 0.00 0.00 41.41 3.27
892 2118 9.245962 CTAGAAAAAGTCGTAAAGAGTTCTGAA 57.754 33.333 0.00 0.00 41.41 3.02
893 2119 7.907194 AGAAAAAGTCGTAAAGAGTTCTGAAC 58.093 34.615 12.54 12.54 41.41 3.18
894 2120 6.600246 AAAAGTCGTAAAGAGTTCTGAACC 57.400 37.500 16.48 8.60 41.41 3.62
895 2121 4.931661 AGTCGTAAAGAGTTCTGAACCA 57.068 40.909 16.48 0.00 0.00 3.67
896 2122 5.272283 AGTCGTAAAGAGTTCTGAACCAA 57.728 39.130 16.48 0.00 0.00 3.67
897 2123 5.667466 AGTCGTAAAGAGTTCTGAACCAAA 58.333 37.500 16.48 0.00 0.00 3.28
898 2124 5.522824 AGTCGTAAAGAGTTCTGAACCAAAC 59.477 40.000 16.48 7.71 0.00 2.93
899 2125 5.292589 GTCGTAAAGAGTTCTGAACCAAACA 59.707 40.000 16.48 0.00 0.00 2.83
902 2128 2.932261 AGAGTTCTGAACCAAACACCC 58.068 47.619 16.48 0.00 0.00 4.61
1086 2332 1.596464 CCGATTACAGTCTACGTCCGC 60.596 57.143 0.00 0.00 0.00 5.54
1108 2354 0.669077 CGACGAGGAGGGGAACTATG 59.331 60.000 0.00 0.00 0.00 2.23
1119 2365 1.685517 GGGAACTATGACCCGAGGTAC 59.314 57.143 0.00 0.00 35.25 3.34
1195 2441 1.479323 TCCGTACATTCTACACCAGCC 59.521 52.381 0.00 0.00 0.00 4.85
1211 2457 2.782222 GCCTCTACATCGCCCGTCA 61.782 63.158 0.00 0.00 0.00 4.35
1337 2601 8.390354 TGTATTTCATTTCACTGATCGATCAAC 58.610 33.333 27.09 17.56 36.18 3.18
1369 2633 9.571816 TTCCAATTTATTTTGATTGCTTTTCCT 57.428 25.926 0.00 0.00 33.08 3.36
1370 2634 9.001542 TCCAATTTATTTTGATTGCTTTTCCTG 57.998 29.630 0.00 0.00 33.08 3.86
1371 2635 7.751793 CCAATTTATTTTGATTGCTTTTCCTGC 59.248 33.333 0.00 0.00 33.08 4.85
1372 2636 6.799926 TTTATTTTGATTGCTTTTCCTGCC 57.200 33.333 0.00 0.00 0.00 4.85
1444 2708 2.032620 CGTCCCTCAAGGCTAGTACAT 58.967 52.381 0.00 0.00 34.51 2.29
1550 2814 4.706962 GGCTACAACATTGGAGGAGAAATT 59.293 41.667 5.99 0.00 39.59 1.82
1603 2885 0.035820 GGACACGGTTATGGCCTCAA 60.036 55.000 3.32 0.00 45.39 3.02
1638 2920 2.069776 CCTTGCCTCACCTTCTGGA 58.930 57.895 0.00 0.00 37.04 3.86
1794 3076 5.484173 TGGATCGCTATTTTCATCAACAC 57.516 39.130 0.00 0.00 0.00 3.32
1806 3088 1.745087 CATCAACACCGGGATCCAAAG 59.255 52.381 15.23 3.57 0.00 2.77
2024 3541 5.221966 TGGCACCAAAAGTTAGTGGTATACT 60.222 40.000 10.12 0.00 46.61 2.12
2152 3777 8.411991 AGCTGAAACTAATATAGTACTCCCTC 57.588 38.462 0.00 0.00 38.26 4.30
2153 3778 8.005388 AGCTGAAACTAATATAGTACTCCCTCA 58.995 37.037 0.00 0.00 38.26 3.86
2154 3779 8.083462 GCTGAAACTAATATAGTACTCCCTCAC 58.917 40.741 0.00 0.00 38.26 3.51
2155 3780 9.357161 CTGAAACTAATATAGTACTCCCTCACT 57.643 37.037 0.00 0.00 38.26 3.41
2156 3781 9.352191 TGAAACTAATATAGTACTCCCTCACTC 57.648 37.037 0.00 0.00 38.26 3.51
2157 3782 9.577222 GAAACTAATATAGTACTCCCTCACTCT 57.423 37.037 0.00 0.00 38.26 3.24
2158 3783 8.927675 AACTAATATAGTACTCCCTCACTCTG 57.072 38.462 0.00 0.00 38.26 3.35
2159 3784 7.463431 ACTAATATAGTACTCCCTCACTCTGG 58.537 42.308 0.00 0.00 37.23 3.86
2160 3785 6.532119 AATATAGTACTCCCTCACTCTGGA 57.468 41.667 0.00 0.00 0.00 3.86
2161 3786 4.883021 ATAGTACTCCCTCACTCTGGAA 57.117 45.455 0.00 0.00 0.00 3.53
2162 3787 3.544698 AGTACTCCCTCACTCTGGAAA 57.455 47.619 0.00 0.00 0.00 3.13
2163 3788 4.067944 AGTACTCCCTCACTCTGGAAAT 57.932 45.455 0.00 0.00 0.00 2.17
2164 3789 5.208294 AGTACTCCCTCACTCTGGAAATA 57.792 43.478 0.00 0.00 0.00 1.40
2165 3790 4.957327 AGTACTCCCTCACTCTGGAAATAC 59.043 45.833 0.00 0.00 0.00 1.89
2166 3791 4.067944 ACTCCCTCACTCTGGAAATACT 57.932 45.455 0.00 0.00 0.00 2.12
2167 3792 4.430441 ACTCCCTCACTCTGGAAATACTT 58.570 43.478 0.00 0.00 0.00 2.24
2168 3793 4.223923 ACTCCCTCACTCTGGAAATACTTG 59.776 45.833 0.00 0.00 0.00 3.16
2169 3794 4.168101 TCCCTCACTCTGGAAATACTTGT 58.832 43.478 0.00 0.00 0.00 3.16
2170 3795 4.223032 TCCCTCACTCTGGAAATACTTGTC 59.777 45.833 0.00 0.00 0.00 3.18
2171 3796 4.508662 CCTCACTCTGGAAATACTTGTCC 58.491 47.826 0.00 0.00 0.00 4.02
2172 3797 4.177026 CTCACTCTGGAAATACTTGTCCG 58.823 47.826 0.00 0.00 36.65 4.79
2173 3798 3.830178 TCACTCTGGAAATACTTGTCCGA 59.170 43.478 0.00 0.00 36.65 4.55
2174 3799 4.082190 TCACTCTGGAAATACTTGTCCGAG 60.082 45.833 0.00 0.00 38.94 4.63
2175 3800 3.195825 ACTCTGGAAATACTTGTCCGAGG 59.804 47.826 12.70 0.00 38.13 4.63
2176 3801 3.437213 TCTGGAAATACTTGTCCGAGGA 58.563 45.455 0.00 0.00 36.65 3.71
2177 3802 3.835978 TCTGGAAATACTTGTCCGAGGAA 59.164 43.478 0.00 0.00 36.65 3.36
2178 3803 4.469945 TCTGGAAATACTTGTCCGAGGAAT 59.530 41.667 0.00 0.00 36.65 3.01
2179 3804 4.513442 TGGAAATACTTGTCCGAGGAATG 58.487 43.478 0.00 0.00 36.65 2.67
2180 3805 3.877508 GGAAATACTTGTCCGAGGAATGG 59.122 47.826 0.00 0.00 0.00 3.16
2181 3806 4.383770 GGAAATACTTGTCCGAGGAATGGA 60.384 45.833 0.00 0.00 0.00 3.41
2182 3807 5.368989 GAAATACTTGTCCGAGGAATGGAT 58.631 41.667 0.00 0.00 37.93 3.41
2183 3808 2.698855 ACTTGTCCGAGGAATGGATG 57.301 50.000 0.00 0.00 37.93 3.51
2184 3809 1.909302 ACTTGTCCGAGGAATGGATGT 59.091 47.619 0.00 0.00 37.93 3.06
2185 3810 3.104512 ACTTGTCCGAGGAATGGATGTA 58.895 45.455 0.00 0.00 37.93 2.29
2186 3811 3.711704 ACTTGTCCGAGGAATGGATGTAT 59.288 43.478 0.00 0.00 37.93 2.29
2187 3812 4.202264 ACTTGTCCGAGGAATGGATGTATC 60.202 45.833 0.00 0.00 37.93 2.24
2188 3813 3.576861 TGTCCGAGGAATGGATGTATCT 58.423 45.455 0.00 0.00 37.93 1.98
2189 3814 4.736473 TGTCCGAGGAATGGATGTATCTA 58.264 43.478 0.00 0.00 37.93 1.98
2190 3815 4.767409 TGTCCGAGGAATGGATGTATCTAG 59.233 45.833 0.00 0.00 37.93 2.43
2191 3816 5.010933 GTCCGAGGAATGGATGTATCTAGA 58.989 45.833 0.00 0.00 37.93 2.43
2192 3817 5.654650 GTCCGAGGAATGGATGTATCTAGAT 59.345 44.000 10.73 10.73 37.93 1.98
2193 3818 5.654209 TCCGAGGAATGGATGTATCTAGATG 59.346 44.000 15.79 0.00 0.00 2.90
2194 3819 5.420421 CCGAGGAATGGATGTATCTAGATGT 59.580 44.000 15.79 1.25 0.00 3.06
2195 3820 6.603599 CCGAGGAATGGATGTATCTAGATGTA 59.396 42.308 15.79 4.44 0.00 2.29
2196 3821 7.286546 CCGAGGAATGGATGTATCTAGATGTAT 59.713 40.741 15.79 9.11 0.00 2.29
2197 3822 8.690884 CGAGGAATGGATGTATCTAGATGTATT 58.309 37.037 15.79 6.57 0.00 1.89
2232 3857 8.780616 AATACATCCATTTGTATCCATTTCCA 57.219 30.769 0.00 0.00 40.94 3.53
2233 3858 6.469782 ACATCCATTTGTATCCATTTCCAC 57.530 37.500 0.00 0.00 0.00 4.02
2234 3859 5.067674 ACATCCATTTGTATCCATTTCCACG 59.932 40.000 0.00 0.00 0.00 4.94
2235 3860 4.849518 TCCATTTGTATCCATTTCCACGA 58.150 39.130 0.00 0.00 0.00 4.35
2236 3861 4.638421 TCCATTTGTATCCATTTCCACGAC 59.362 41.667 0.00 0.00 0.00 4.34
2237 3862 4.397730 CCATTTGTATCCATTTCCACGACA 59.602 41.667 0.00 0.00 0.00 4.35
2238 3863 5.105957 CCATTTGTATCCATTTCCACGACAA 60.106 40.000 0.00 0.00 0.00 3.18
2239 3864 5.621197 TTTGTATCCATTTCCACGACAAG 57.379 39.130 0.00 0.00 0.00 3.16
2240 3865 4.280436 TGTATCCATTTCCACGACAAGT 57.720 40.909 0.00 0.00 0.00 3.16
2241 3866 5.408880 TGTATCCATTTCCACGACAAGTA 57.591 39.130 0.00 0.00 0.00 2.24
2242 3867 5.984725 TGTATCCATTTCCACGACAAGTAT 58.015 37.500 0.00 0.00 0.00 2.12
2243 3868 6.411376 TGTATCCATTTCCACGACAAGTATT 58.589 36.000 0.00 0.00 0.00 1.89
2244 3869 6.882140 TGTATCCATTTCCACGACAAGTATTT 59.118 34.615 0.00 0.00 0.00 1.40
2245 3870 5.873179 TCCATTTCCACGACAAGTATTTC 57.127 39.130 0.00 0.00 0.00 2.17
2246 3871 4.698304 TCCATTTCCACGACAAGTATTTCC 59.302 41.667 0.00 0.00 0.00 3.13
2247 3872 4.436852 CCATTTCCACGACAAGTATTTCCG 60.437 45.833 0.00 0.00 0.00 4.30
2248 3873 2.373540 TCCACGACAAGTATTTCCGG 57.626 50.000 0.00 0.00 0.00 5.14
2249 3874 1.894466 TCCACGACAAGTATTTCCGGA 59.106 47.619 0.00 0.00 0.00 5.14
2250 3875 1.997606 CCACGACAAGTATTTCCGGAC 59.002 52.381 1.83 0.00 0.00 4.79
2251 3876 1.652124 CACGACAAGTATTTCCGGACG 59.348 52.381 1.83 3.25 0.00 4.79
2252 3877 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
2253 3878 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
2254 3879 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
2255 3880 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2256 3881 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2257 3882 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2258 3883 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2259 3884 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
2285 3910 6.166279 TCACACACCTCTATTTCTGTCAATC 58.834 40.000 0.00 0.00 0.00 2.67
2401 4028 5.167218 AGTAACGCTCCGAGAACTTATAC 57.833 43.478 0.00 0.00 0.00 1.47
2464 4091 0.107263 TTGCTCACCAGTCTGCAACA 60.107 50.000 0.00 0.00 39.98 3.33
2578 4211 7.546250 AGCTACTAACCATATACAATGCTCT 57.454 36.000 0.00 0.00 0.00 4.09
2694 4327 7.457218 AGAAGCTTTCCAGATCCTATATCATCA 59.543 37.037 0.00 0.00 0.00 3.07
2699 4332 6.541934 TCCAGATCCTATATCATCAAGCAG 57.458 41.667 0.00 0.00 0.00 4.24
2779 4412 1.303806 GCCTTTCGGGGGTTTGCTA 60.304 57.895 0.00 0.00 35.12 3.49
2806 4581 4.624913 TCCTCTCTCTCTCTCTCTCTCTT 58.375 47.826 0.00 0.00 0.00 2.85
2899 4682 2.731217 ACTCAAAGATGTTTTGCACGC 58.269 42.857 0.00 0.00 0.00 5.34
3044 4827 6.777580 TGCTACAAGGAAAAGAAGAGGAATTT 59.222 34.615 0.00 0.00 0.00 1.82
3120 4913 9.807921 ACCCTTTTCTTAGATTTTGAGTATTGA 57.192 29.630 0.00 0.00 0.00 2.57
3213 5008 7.715249 TGACTACAGCACTTGATCTTTAGTTTT 59.285 33.333 0.00 0.00 29.06 2.43
3510 5436 3.842925 TTGCCGGTCAGGTGAAGGC 62.843 63.158 16.65 16.65 44.91 4.35
3517 5455 0.759346 GTCAGGTGAAGGCGGGATAT 59.241 55.000 0.00 0.00 0.00 1.63
3535 5473 6.403636 CGGGATATTATTGTTATGAAGGCTGC 60.404 42.308 0.00 0.00 0.00 5.25
3573 5511 5.230726 ACGACGAAAATGTATGAACGATACC 59.769 40.000 0.00 0.00 36.79 2.73
3576 5514 7.173863 ACGAAAATGTATGAACGATACCATC 57.826 36.000 0.00 0.00 36.79 3.51
3583 5524 8.603242 ATGTATGAACGATACCATCTTTAACC 57.397 34.615 0.00 0.00 36.79 2.85
3681 5625 6.206829 TGGAAGCTAAGAAAGAAAAGGTAAGC 59.793 38.462 0.00 0.00 0.00 3.09
3773 5717 6.684362 GCTGGTTACTTGGTTGGTTGTAAATT 60.684 38.462 0.00 0.00 0.00 1.82
3781 5725 5.908341 TGGTTGGTTGTAAATTGTTTCTCC 58.092 37.500 0.00 0.00 0.00 3.71
3802 5749 7.713750 TCTCCTGTATTTATTTCTGTAGGACG 58.286 38.462 0.00 0.00 0.00 4.79
3813 5760 2.688446 TCTGTAGGACGGTTGCTGATAG 59.312 50.000 0.00 0.00 0.00 2.08
3822 5769 2.852413 CGGTTGCTGATAGAACGTGTAG 59.148 50.000 0.00 0.00 0.00 2.74
3832 5779 6.330278 TGATAGAACGTGTAGGAAGATGTTG 58.670 40.000 0.00 0.00 28.81 3.33
3835 5782 2.942710 ACGTGTAGGAAGATGTTGACG 58.057 47.619 0.00 0.00 0.00 4.35
3863 5810 4.530875 CTCCAACTATGAGGGCTTTTGAT 58.469 43.478 0.00 0.00 0.00 2.57
3905 5853 4.893601 GCCGGCGACTAAGAGGCC 62.894 72.222 12.58 0.00 41.81 5.19
3908 5856 3.617368 GGCGACTAAGAGGCCAGA 58.383 61.111 5.01 0.00 46.13 3.86
4059 6512 0.179163 GAATGTTGCGCCTGCTTACC 60.179 55.000 4.18 0.00 43.34 2.85
4206 6910 7.231467 ACTAAAGAATTTTCCACTCCTAAGCA 58.769 34.615 0.00 0.00 40.09 3.91
4207 6911 5.966742 AAGAATTTTCCACTCCTAAGCAC 57.033 39.130 0.00 0.00 0.00 4.40
4249 6953 1.035139 CCCTGCATTTCTACCATGCC 58.965 55.000 2.56 0.00 45.59 4.40
4254 6958 0.304705 CATTTCTACCATGCCGTCGC 59.695 55.000 0.00 0.00 0.00 5.19
4255 6959 0.178068 ATTTCTACCATGCCGTCGCT 59.822 50.000 0.00 0.00 35.36 4.93
4322 7026 2.203788 TGGTGAACGGGAGGCTCT 60.204 61.111 15.23 0.00 0.00 4.09
4348 7052 3.347216 CGACATGATGGAGGAACCTTTT 58.653 45.455 0.00 0.00 39.86 2.27
4349 7053 3.127548 CGACATGATGGAGGAACCTTTTG 59.872 47.826 0.00 0.00 39.86 2.44
4410 7114 1.227089 CATGCTTCGGACTCTCGGG 60.227 63.158 0.00 0.00 0.00 5.14
4424 7128 3.197983 ACTCTCGGGGACTAAGAAAATGG 59.802 47.826 0.00 0.00 0.00 3.16
4584 7308 5.415701 TCCCTGCAACTATTCAAGTTTGATC 59.584 40.000 0.00 0.00 46.61 2.92
4600 7324 2.775418 TGATCAATAAGGCCTGAGGGA 58.225 47.619 5.69 0.00 33.58 4.20
4610 7334 2.024941 AGGCCTGAGGGATGGTTAAAAG 60.025 50.000 3.11 0.00 33.58 2.27
4613 7337 3.444034 GCCTGAGGGATGGTTAAAAGAAC 59.556 47.826 0.00 0.00 33.58 3.01
4623 7347 3.769844 TGGTTAAAAGAACCAACAGGCAA 59.230 39.130 6.70 0.00 46.44 4.52
4641 7365 5.652014 CAGGCAATTTACAGGGATTTAGACA 59.348 40.000 0.00 0.00 0.00 3.41
4642 7366 5.652452 AGGCAATTTACAGGGATTTAGACAC 59.348 40.000 0.00 0.00 0.00 3.67
4646 7370 1.652947 ACAGGGATTTAGACACGGGT 58.347 50.000 0.00 0.00 0.00 5.28
4676 7400 1.546773 CCACCAATTGAAAGTCGGGGA 60.547 52.381 7.12 0.00 0.00 4.81
4677 7401 2.446435 CACCAATTGAAAGTCGGGGAT 58.554 47.619 7.12 0.00 0.00 3.85
4678 7402 3.616219 CACCAATTGAAAGTCGGGGATA 58.384 45.455 7.12 0.00 0.00 2.59
4679 7403 3.377172 CACCAATTGAAAGTCGGGGATAC 59.623 47.826 7.12 0.00 0.00 2.24
4713 7441 6.126409 TCTAAACATTCAACCACAGGTTTCT 58.874 36.000 0.00 0.00 44.33 2.52
4714 7442 4.918810 AACATTCAACCACAGGTTTCTC 57.081 40.909 0.00 0.00 44.33 2.87
4767 7507 0.373716 GATGCGCGTTTAGTTGGAGG 59.626 55.000 8.43 0.00 0.00 4.30
4773 7513 1.336609 GCGTTTAGTTGGAGGAGACGT 60.337 52.381 0.00 0.00 0.00 4.34
4776 7516 3.805971 CGTTTAGTTGGAGGAGACGTTTT 59.194 43.478 0.00 0.00 0.00 2.43
4798 7538 0.654160 TCGACTACGACGTGCCTATG 59.346 55.000 11.56 0.00 43.81 2.23
4803 7543 1.337071 CTACGACGTGCCTATGGTGAT 59.663 52.381 11.56 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
273 349 9.939802 GACCCTTTTTCTAATCTAACTAACTGA 57.060 33.333 0.00 0.00 0.00 3.41
274 350 9.945904 AGACCCTTTTTCTAATCTAACTAACTG 57.054 33.333 0.00 0.00 0.00 3.16
275 351 9.945904 CAGACCCTTTTTCTAATCTAACTAACT 57.054 33.333 0.00 0.00 0.00 2.24
276 352 9.722184 ACAGACCCTTTTTCTAATCTAACTAAC 57.278 33.333 0.00 0.00 0.00 2.34
278 354 9.322769 AGACAGACCCTTTTTCTAATCTAACTA 57.677 33.333 0.00 0.00 0.00 2.24
279 355 8.208575 AGACAGACCCTTTTTCTAATCTAACT 57.791 34.615 0.00 0.00 0.00 2.24
282 358 8.120538 TCCTAGACAGACCCTTTTTCTAATCTA 58.879 37.037 0.00 0.00 0.00 1.98
284 360 7.042950 GTCCTAGACAGACCCTTTTTCTAATC 58.957 42.308 0.00 0.00 32.09 1.75
285 361 6.500751 TGTCCTAGACAGACCCTTTTTCTAAT 59.499 38.462 0.00 0.00 37.67 1.73
286 362 5.842328 TGTCCTAGACAGACCCTTTTTCTAA 59.158 40.000 0.00 0.00 37.67 2.10
288 364 4.040584 GTGTCCTAGACAGACCCTTTTTCT 59.959 45.833 0.00 0.00 43.57 2.52
289 365 4.202326 TGTGTCCTAGACAGACCCTTTTTC 60.202 45.833 0.00 0.00 43.57 2.29
290 366 3.714798 TGTGTCCTAGACAGACCCTTTTT 59.285 43.478 0.00 0.00 43.57 1.94
291 367 3.314693 TGTGTCCTAGACAGACCCTTTT 58.685 45.455 0.00 0.00 43.57 2.27
292 368 2.972348 TGTGTCCTAGACAGACCCTTT 58.028 47.619 0.00 0.00 43.57 3.11
293 369 2.696526 TGTGTCCTAGACAGACCCTT 57.303 50.000 0.00 0.00 43.57 3.95
294 370 2.313342 AGATGTGTCCTAGACAGACCCT 59.687 50.000 0.00 0.00 43.57 4.34
295 371 2.741145 AGATGTGTCCTAGACAGACCC 58.259 52.381 0.00 0.00 43.57 4.46
296 372 4.783055 TCTAGATGTGTCCTAGACAGACC 58.217 47.826 0.00 0.00 43.57 3.85
297 373 7.663905 ACATATCTAGATGTGTCCTAGACAGAC 59.336 40.741 24.74 0.00 43.57 3.51
299 375 7.994425 ACATATCTAGATGTGTCCTAGACAG 57.006 40.000 24.74 2.68 43.57 3.51
308 384 8.580720 GGTTAGATGTGACATATCTAGATGTGT 58.419 37.037 28.91 28.91 44.19 3.72
309 385 8.801299 AGGTTAGATGTGACATATCTAGATGTG 58.199 37.037 23.54 23.54 40.18 3.21
310 386 8.948401 AGGTTAGATGTGACATATCTAGATGT 57.052 34.615 18.02 7.11 42.82 3.06
316 392 7.256119 GGACATGAGGTTAGATGTGACATATCT 60.256 40.741 17.55 17.55 38.40 1.98
319 395 5.660864 TGGACATGAGGTTAGATGTGACATA 59.339 40.000 0.00 0.00 32.85 2.29
321 397 3.837731 TGGACATGAGGTTAGATGTGACA 59.162 43.478 0.00 0.00 32.85 3.58
323 399 4.096681 AGTGGACATGAGGTTAGATGTGA 58.903 43.478 0.00 0.00 32.85 3.58
325 401 5.663106 ACATAGTGGACATGAGGTTAGATGT 59.337 40.000 0.00 0.00 35.46 3.06
326 402 6.166984 ACATAGTGGACATGAGGTTAGATG 57.833 41.667 0.00 0.00 0.00 2.90
327 403 6.814954 AACATAGTGGACATGAGGTTAGAT 57.185 37.500 0.00 0.00 0.00 1.98
328 404 6.013725 ACAAACATAGTGGACATGAGGTTAGA 60.014 38.462 0.00 0.00 0.00 2.10
329 405 6.092670 CACAAACATAGTGGACATGAGGTTAG 59.907 42.308 0.00 0.00 33.43 2.34
330 406 5.937540 CACAAACATAGTGGACATGAGGTTA 59.062 40.000 0.00 0.00 33.43 2.85
331 407 4.761739 CACAAACATAGTGGACATGAGGTT 59.238 41.667 0.00 0.00 33.43 3.50
332 408 4.326826 CACAAACATAGTGGACATGAGGT 58.673 43.478 0.00 0.00 33.43 3.85
346 422 8.428852 GGGATAAAATAAATAGGCCACAAACAT 58.571 33.333 5.01 0.00 0.00 2.71
347 423 7.400339 TGGGATAAAATAAATAGGCCACAAACA 59.600 33.333 5.01 0.00 0.00 2.83
349 425 7.418483 GCTGGGATAAAATAAATAGGCCACAAA 60.418 37.037 5.01 0.00 0.00 2.83
350 426 6.041523 GCTGGGATAAAATAAATAGGCCACAA 59.958 38.462 5.01 0.00 0.00 3.33
351 427 5.538433 GCTGGGATAAAATAAATAGGCCACA 59.462 40.000 5.01 0.00 0.00 4.17
352 428 5.775195 AGCTGGGATAAAATAAATAGGCCAC 59.225 40.000 5.01 0.00 0.00 5.01
353 429 5.964288 AGCTGGGATAAAATAAATAGGCCA 58.036 37.500 5.01 0.00 0.00 5.36
354 430 6.918067 AAGCTGGGATAAAATAAATAGGCC 57.082 37.500 0.00 0.00 0.00 5.19
380 456 3.325293 TGCAGCAACAAGGAACAAAAA 57.675 38.095 0.00 0.00 0.00 1.94
381 457 3.540314 ATGCAGCAACAAGGAACAAAA 57.460 38.095 0.00 0.00 0.00 2.44
382 458 3.540314 AATGCAGCAACAAGGAACAAA 57.460 38.095 0.00 0.00 0.00 2.83
383 459 4.870123 ATAATGCAGCAACAAGGAACAA 57.130 36.364 0.00 0.00 0.00 2.83
384 460 4.870123 AATAATGCAGCAACAAGGAACA 57.130 36.364 0.00 0.00 0.00 3.18
385 461 4.990426 ACAAATAATGCAGCAACAAGGAAC 59.010 37.500 0.00 0.00 0.00 3.62
386 462 4.989797 CACAAATAATGCAGCAACAAGGAA 59.010 37.500 0.00 0.00 0.00 3.36
387 463 4.558178 CACAAATAATGCAGCAACAAGGA 58.442 39.130 0.00 0.00 0.00 3.36
388 464 3.680937 CCACAAATAATGCAGCAACAAGG 59.319 43.478 0.00 0.00 0.00 3.61
389 465 3.680937 CCCACAAATAATGCAGCAACAAG 59.319 43.478 0.00 0.00 0.00 3.16
390 466 3.323115 TCCCACAAATAATGCAGCAACAA 59.677 39.130 0.00 0.00 0.00 2.83
391 467 2.896044 TCCCACAAATAATGCAGCAACA 59.104 40.909 0.00 0.00 0.00 3.33
392 468 3.514645 CTCCCACAAATAATGCAGCAAC 58.485 45.455 0.00 0.00 0.00 4.17
393 469 2.094078 GCTCCCACAAATAATGCAGCAA 60.094 45.455 0.00 0.00 0.00 3.91
394 470 1.477700 GCTCCCACAAATAATGCAGCA 59.522 47.619 0.00 0.00 0.00 4.41
395 471 1.753073 AGCTCCCACAAATAATGCAGC 59.247 47.619 0.00 0.00 0.00 5.25
396 472 4.883585 TCTAAGCTCCCACAAATAATGCAG 59.116 41.667 0.00 0.00 0.00 4.41
397 473 4.854173 TCTAAGCTCCCACAAATAATGCA 58.146 39.130 0.00 0.00 0.00 3.96
398 474 5.300286 ACATCTAAGCTCCCACAAATAATGC 59.700 40.000 0.00 0.00 0.00 3.56
399 475 6.543465 TCACATCTAAGCTCCCACAAATAATG 59.457 38.462 0.00 0.00 0.00 1.90
400 476 6.543831 GTCACATCTAAGCTCCCACAAATAAT 59.456 38.462 0.00 0.00 0.00 1.28
401 477 5.880332 GTCACATCTAAGCTCCCACAAATAA 59.120 40.000 0.00 0.00 0.00 1.40
402 478 5.045942 TGTCACATCTAAGCTCCCACAAATA 60.046 40.000 0.00 0.00 0.00 1.40
403 479 4.263462 TGTCACATCTAAGCTCCCACAAAT 60.263 41.667 0.00 0.00 0.00 2.32
404 480 3.072330 TGTCACATCTAAGCTCCCACAAA 59.928 43.478 0.00 0.00 0.00 2.83
405 481 2.637382 TGTCACATCTAAGCTCCCACAA 59.363 45.455 0.00 0.00 0.00 3.33
406 482 2.256306 TGTCACATCTAAGCTCCCACA 58.744 47.619 0.00 0.00 0.00 4.17
407 483 3.462021 GATGTCACATCTAAGCTCCCAC 58.538 50.000 10.81 0.00 0.00 4.61
408 484 2.435805 GGATGTCACATCTAAGCTCCCA 59.564 50.000 17.46 0.00 0.00 4.37
409 485 2.703007 AGGATGTCACATCTAAGCTCCC 59.297 50.000 17.46 0.00 0.00 4.30
410 486 4.414337 AAGGATGTCACATCTAAGCTCC 57.586 45.455 17.46 0.18 0.00 4.70
411 487 5.907207 TGTAAGGATGTCACATCTAAGCTC 58.093 41.667 17.46 0.00 0.00 4.09
412 488 5.939764 TGTAAGGATGTCACATCTAAGCT 57.060 39.130 17.46 3.19 0.00 3.74
413 489 6.985188 TTTGTAAGGATGTCACATCTAAGC 57.015 37.500 17.46 6.83 0.00 3.09
414 490 8.322906 TGTTTTGTAAGGATGTCACATCTAAG 57.677 34.615 17.46 0.00 0.00 2.18
415 491 8.862325 ATGTTTTGTAAGGATGTCACATCTAA 57.138 30.769 17.46 0.77 0.00 2.10
416 492 8.321353 AGATGTTTTGTAAGGATGTCACATCTA 58.679 33.333 17.46 0.16 44.89 1.98
417 493 7.170965 AGATGTTTTGTAAGGATGTCACATCT 58.829 34.615 17.46 1.18 42.98 2.90
418 494 7.383102 AGATGTTTTGTAAGGATGTCACATC 57.617 36.000 9.53 9.53 39.62 3.06
419 495 8.321353 TCTAGATGTTTTGTAAGGATGTCACAT 58.679 33.333 0.00 0.00 0.00 3.21
420 496 7.676004 TCTAGATGTTTTGTAAGGATGTCACA 58.324 34.615 0.00 0.00 0.00 3.58
421 497 8.607459 CATCTAGATGTTTTGTAAGGATGTCAC 58.393 37.037 22.42 0.00 34.23 3.67
422 498 8.722480 CATCTAGATGTTTTGTAAGGATGTCA 57.278 34.615 22.42 0.00 34.23 3.58
438 514 9.376075 ACAGTTTGTCTAATTCACATCTAGATG 57.624 33.333 27.63 27.63 44.15 2.90
439 515 9.950496 AACAGTTTGTCTAATTCACATCTAGAT 57.050 29.630 0.00 0.00 0.00 1.98
443 519 9.778741 TTCTAACAGTTTGTCTAATTCACATCT 57.221 29.630 0.00 0.00 0.00 2.90
478 554 7.327518 CCATGGGTTTAAAATACGTTTGAGAAC 59.672 37.037 2.85 0.00 0.00 3.01
626 1852 1.126846 CTTCGTGCTCGCTCGATTTTT 59.873 47.619 15.41 0.00 40.72 1.94
639 1865 1.065551 GGCCCAAATATCACTTCGTGC 59.934 52.381 0.00 0.00 32.98 5.34
675 1901 0.392327 GAGTCAGGCCCTTCTTCAGC 60.392 60.000 0.00 0.00 0.00 4.26
678 1904 0.390472 CACGAGTCAGGCCCTTCTTC 60.390 60.000 0.00 0.00 0.00 2.87
691 1917 2.884894 AAAAGAACGGAGACACGAGT 57.115 45.000 0.00 0.00 37.61 4.18
715 1941 5.061721 ACCAAACACTCCCTGAGTAAAAT 57.938 39.130 0.00 0.00 41.37 1.82
716 1942 4.513406 ACCAAACACTCCCTGAGTAAAA 57.487 40.909 0.00 0.00 41.37 1.52
718 1944 3.456644 TGAACCAAACACTCCCTGAGTAA 59.543 43.478 0.00 0.00 41.37 2.24
719 1945 3.042682 TGAACCAAACACTCCCTGAGTA 58.957 45.455 0.00 0.00 41.37 2.59
720 1946 1.843851 TGAACCAAACACTCCCTGAGT 59.156 47.619 0.00 0.00 44.44 3.41
721 1947 2.498167 CTGAACCAAACACTCCCTGAG 58.502 52.381 0.00 0.00 35.52 3.35
722 1948 1.142870 CCTGAACCAAACACTCCCTGA 59.857 52.381 0.00 0.00 0.00 3.86
723 1949 1.609208 CCTGAACCAAACACTCCCTG 58.391 55.000 0.00 0.00 0.00 4.45
724 1950 0.478507 CCCTGAACCAAACACTCCCT 59.521 55.000 0.00 0.00 0.00 4.20
725 1951 0.476771 TCCCTGAACCAAACACTCCC 59.523 55.000 0.00 0.00 0.00 4.30
726 1952 1.143073 AGTCCCTGAACCAAACACTCC 59.857 52.381 0.00 0.00 0.00 3.85
727 1953 2.640316 AGTCCCTGAACCAAACACTC 57.360 50.000 0.00 0.00 0.00 3.51
728 1954 3.382083 AAAGTCCCTGAACCAAACACT 57.618 42.857 0.00 0.00 0.00 3.55
729 1955 4.465632 AAAAAGTCCCTGAACCAAACAC 57.534 40.909 0.00 0.00 0.00 3.32
730 1956 5.265989 ACTAAAAAGTCCCTGAACCAAACA 58.734 37.500 0.00 0.00 0.00 2.83
731 1957 5.828747 GACTAAAAAGTCCCTGAACCAAAC 58.171 41.667 0.00 0.00 32.97 2.93
752 1978 4.322877 GGGACTTTTTCTAGTCTCTGGGAC 60.323 50.000 0.00 0.00 41.50 4.46
753 1979 3.838903 GGGACTTTTTCTAGTCTCTGGGA 59.161 47.826 0.00 0.00 41.50 4.37
754 1980 4.209307 GGGACTTTTTCTAGTCTCTGGG 57.791 50.000 0.00 0.00 41.50 4.45
758 1984 8.850007 ACATTTTAGGGACTTTTTCTAGTCTC 57.150 34.615 0.00 0.00 44.42 3.36
759 1985 7.883833 GGACATTTTAGGGACTTTTTCTAGTCT 59.116 37.037 0.00 0.00 43.26 3.24
760 1986 7.120873 GGGACATTTTAGGGACTTTTTCTAGTC 59.879 40.741 0.00 0.00 43.05 2.59
761 1987 6.946583 GGGACATTTTAGGGACTTTTTCTAGT 59.053 38.462 0.00 0.00 41.75 2.57
762 1988 7.175797 AGGGACATTTTAGGGACTTTTTCTAG 58.824 38.462 0.00 0.00 41.75 2.43
763 1989 7.098845 AGGGACATTTTAGGGACTTTTTCTA 57.901 36.000 0.00 0.00 41.75 2.10
764 1990 5.965486 AGGGACATTTTAGGGACTTTTTCT 58.035 37.500 0.00 0.00 41.75 2.52
765 1991 7.173032 TCTAGGGACATTTTAGGGACTTTTTC 58.827 38.462 0.00 0.00 41.75 2.29
766 1992 7.098845 TCTAGGGACATTTTAGGGACTTTTT 57.901 36.000 0.00 0.00 41.75 1.94
767 1993 6.713731 TCTAGGGACATTTTAGGGACTTTT 57.286 37.500 0.00 0.00 41.75 2.27
768 1994 6.713731 TTCTAGGGACATTTTAGGGACTTT 57.286 37.500 0.00 0.00 41.75 2.66
769 1995 6.482524 GTTTCTAGGGACATTTTAGGGACTT 58.517 40.000 0.00 0.00 41.75 3.01
770 1996 5.045066 GGTTTCTAGGGACATTTTAGGGACT 60.045 44.000 0.00 0.00 46.37 3.85
771 1997 5.191426 GGTTTCTAGGGACATTTTAGGGAC 58.809 45.833 0.00 0.00 0.00 4.46
772 1998 4.853276 TGGTTTCTAGGGACATTTTAGGGA 59.147 41.667 0.00 0.00 0.00 4.20
773 1999 5.187621 TGGTTTCTAGGGACATTTTAGGG 57.812 43.478 0.00 0.00 0.00 3.53
774 2000 6.349033 CGTTTGGTTTCTAGGGACATTTTAGG 60.349 42.308 0.00 0.00 0.00 2.69
775 2001 6.349033 CCGTTTGGTTTCTAGGGACATTTTAG 60.349 42.308 0.00 0.00 0.00 1.85
776 2002 5.474189 CCGTTTGGTTTCTAGGGACATTTTA 59.526 40.000 0.00 0.00 0.00 1.52
777 2003 4.279922 CCGTTTGGTTTCTAGGGACATTTT 59.720 41.667 0.00 0.00 0.00 1.82
778 2004 3.824443 CCGTTTGGTTTCTAGGGACATTT 59.176 43.478 0.00 0.00 0.00 2.32
779 2005 3.418047 CCGTTTGGTTTCTAGGGACATT 58.582 45.455 0.00 0.00 0.00 2.71
780 2006 2.290705 CCCGTTTGGTTTCTAGGGACAT 60.291 50.000 0.00 0.00 41.26 3.06
781 2007 1.072648 CCCGTTTGGTTTCTAGGGACA 59.927 52.381 0.00 0.00 41.26 4.02
782 2008 1.348696 TCCCGTTTGGTTTCTAGGGAC 59.651 52.381 0.00 0.00 42.46 4.46
783 2009 1.626825 CTCCCGTTTGGTTTCTAGGGA 59.373 52.381 0.80 0.80 44.85 4.20
784 2010 1.339727 CCTCCCGTTTGGTTTCTAGGG 60.340 57.143 0.00 0.00 40.16 3.53
785 2011 1.339727 CCCTCCCGTTTGGTTTCTAGG 60.340 57.143 0.00 0.00 34.77 3.02
786 2012 1.626825 TCCCTCCCGTTTGGTTTCTAG 59.373 52.381 0.00 0.00 34.77 2.43
787 2013 1.348696 GTCCCTCCCGTTTGGTTTCTA 59.651 52.381 0.00 0.00 34.77 2.10
788 2014 0.109913 GTCCCTCCCGTTTGGTTTCT 59.890 55.000 0.00 0.00 34.77 2.52
789 2015 0.109913 AGTCCCTCCCGTTTGGTTTC 59.890 55.000 0.00 0.00 34.77 2.78
790 2016 0.554305 AAGTCCCTCCCGTTTGGTTT 59.446 50.000 0.00 0.00 34.77 3.27
791 2017 0.554305 AAAGTCCCTCCCGTTTGGTT 59.446 50.000 0.00 0.00 34.77 3.67
792 2018 0.554305 AAAAGTCCCTCCCGTTTGGT 59.446 50.000 0.00 0.00 34.77 3.67
793 2019 1.699730 AAAAAGTCCCTCCCGTTTGG 58.300 50.000 0.00 0.00 0.00 3.28
857 2083 5.641783 ACGACTTTTTCTAGTCTAGGGAC 57.358 43.478 7.05 0.00 41.89 4.46
858 2084 7.667219 TCTTTACGACTTTTTCTAGTCTAGGGA 59.333 37.037 7.05 0.00 41.89 4.20
859 2085 7.824672 TCTTTACGACTTTTTCTAGTCTAGGG 58.175 38.462 7.05 0.00 41.89 3.53
860 2086 8.513774 ACTCTTTACGACTTTTTCTAGTCTAGG 58.486 37.037 7.05 0.00 41.89 3.02
861 2087 9.896263 AACTCTTTACGACTTTTTCTAGTCTAG 57.104 33.333 0.00 0.00 41.89 2.43
862 2088 9.890352 GAACTCTTTACGACTTTTTCTAGTCTA 57.110 33.333 0.00 0.00 41.89 2.59
863 2089 8.631797 AGAACTCTTTACGACTTTTTCTAGTCT 58.368 33.333 0.00 0.00 41.89 3.24
864 2090 8.692615 CAGAACTCTTTACGACTTTTTCTAGTC 58.307 37.037 0.00 0.00 40.90 2.59
865 2091 8.411683 TCAGAACTCTTTACGACTTTTTCTAGT 58.588 33.333 0.00 0.00 0.00 2.57
866 2092 8.798748 TCAGAACTCTTTACGACTTTTTCTAG 57.201 34.615 0.00 0.00 0.00 2.43
867 2093 9.028185 GTTCAGAACTCTTTACGACTTTTTCTA 57.972 33.333 6.00 0.00 0.00 2.10
868 2094 7.011202 GGTTCAGAACTCTTTACGACTTTTTCT 59.989 37.037 13.13 0.00 0.00 2.52
869 2095 7.124471 GGTTCAGAACTCTTTACGACTTTTTC 58.876 38.462 13.13 0.00 0.00 2.29
870 2096 6.596497 TGGTTCAGAACTCTTTACGACTTTTT 59.404 34.615 13.13 0.00 0.00 1.94
871 2097 6.110707 TGGTTCAGAACTCTTTACGACTTTT 58.889 36.000 13.13 0.00 0.00 2.27
872 2098 5.667466 TGGTTCAGAACTCTTTACGACTTT 58.333 37.500 13.13 0.00 0.00 2.66
873 2099 5.272283 TGGTTCAGAACTCTTTACGACTT 57.728 39.130 13.13 0.00 0.00 3.01
874 2100 4.931661 TGGTTCAGAACTCTTTACGACT 57.068 40.909 13.13 0.00 0.00 4.18
875 2101 5.292589 TGTTTGGTTCAGAACTCTTTACGAC 59.707 40.000 13.13 2.76 0.00 4.34
876 2102 5.292589 GTGTTTGGTTCAGAACTCTTTACGA 59.707 40.000 13.13 0.00 0.00 3.43
877 2103 5.499047 GTGTTTGGTTCAGAACTCTTTACG 58.501 41.667 13.13 0.00 0.00 3.18
878 2104 5.220989 GGGTGTTTGGTTCAGAACTCTTTAC 60.221 44.000 13.13 7.42 0.00 2.01
879 2105 4.885325 GGGTGTTTGGTTCAGAACTCTTTA 59.115 41.667 13.13 0.00 0.00 1.85
880 2106 3.699538 GGGTGTTTGGTTCAGAACTCTTT 59.300 43.478 13.13 0.00 0.00 2.52
881 2107 3.288092 GGGTGTTTGGTTCAGAACTCTT 58.712 45.455 13.13 0.00 0.00 2.85
882 2108 2.422945 GGGGTGTTTGGTTCAGAACTCT 60.423 50.000 13.13 0.00 0.00 3.24
883 2109 1.954382 GGGGTGTTTGGTTCAGAACTC 59.046 52.381 13.13 4.29 0.00 3.01
884 2110 1.286553 TGGGGTGTTTGGTTCAGAACT 59.713 47.619 13.13 0.00 0.00 3.01
885 2111 1.770294 TGGGGTGTTTGGTTCAGAAC 58.230 50.000 4.52 4.52 0.00 3.01
886 2112 2.534042 TTGGGGTGTTTGGTTCAGAA 57.466 45.000 0.00 0.00 0.00 3.02
887 2113 2.176798 AGATTGGGGTGTTTGGTTCAGA 59.823 45.455 0.00 0.00 0.00 3.27
888 2114 2.558359 GAGATTGGGGTGTTTGGTTCAG 59.442 50.000 0.00 0.00 0.00 3.02
889 2115 2.091610 TGAGATTGGGGTGTTTGGTTCA 60.092 45.455 0.00 0.00 0.00 3.18
890 2116 2.593026 TGAGATTGGGGTGTTTGGTTC 58.407 47.619 0.00 0.00 0.00 3.62
891 2117 2.765689 TGAGATTGGGGTGTTTGGTT 57.234 45.000 0.00 0.00 0.00 3.67
892 2118 2.765689 TTGAGATTGGGGTGTTTGGT 57.234 45.000 0.00 0.00 0.00 3.67
893 2119 3.194116 CAGATTGAGATTGGGGTGTTTGG 59.806 47.826 0.00 0.00 0.00 3.28
894 2120 4.081406 TCAGATTGAGATTGGGGTGTTTG 58.919 43.478 0.00 0.00 0.00 2.93
895 2121 4.387026 TCAGATTGAGATTGGGGTGTTT 57.613 40.909 0.00 0.00 0.00 2.83
1086 2332 2.749044 TTCCCCTCCTCGTCGACG 60.749 66.667 31.30 31.30 41.45 5.12
1108 2354 2.031360 CGGAGATGTACCTCGGGTC 58.969 63.158 0.00 0.00 37.09 4.46
1195 2441 1.065928 GGTGACGGGCGATGTAGAG 59.934 63.158 0.00 0.00 0.00 2.43
1305 2569 9.516314 CGATCAGTGAAATGAAATACACTAGTA 57.484 33.333 0.00 0.00 40.34 1.82
1306 2570 8.251026 TCGATCAGTGAAATGAAATACACTAGT 58.749 33.333 0.00 0.00 40.34 2.57
1307 2571 8.634475 TCGATCAGTGAAATGAAATACACTAG 57.366 34.615 0.00 0.00 40.34 2.57
1308 2572 9.249457 GATCGATCAGTGAAATGAAATACACTA 57.751 33.333 20.52 0.00 40.34 2.74
1309 2573 7.765819 TGATCGATCAGTGAAATGAAATACACT 59.234 33.333 23.99 0.00 42.03 3.55
1310 2574 7.909267 TGATCGATCAGTGAAATGAAATACAC 58.091 34.615 23.99 0.00 35.16 2.90
1337 2601 8.667463 AGCAATCAAAATAAATTGGAATTTCCG 58.333 29.630 10.79 0.00 40.17 4.30
1369 2633 2.577644 GAATACGTCGTCGCGGCA 60.578 61.111 12.89 0.00 41.18 5.69
1370 2634 3.317795 GGAATACGTCGTCGCGGC 61.318 66.667 6.13 1.93 41.18 6.53
1371 2635 1.937846 CTGGAATACGTCGTCGCGG 60.938 63.158 6.13 0.00 41.18 6.46
1372 2636 0.795735 AACTGGAATACGTCGTCGCG 60.796 55.000 0.00 0.00 41.18 5.87
1381 2645 2.921754 CCACGAACTCGAACTGGAATAC 59.078 50.000 6.05 0.00 43.02 1.89
1444 2708 2.159099 CGGACGATTTCTCCTCCAATGA 60.159 50.000 0.00 0.00 0.00 2.57
1550 2814 1.944177 CCCAGAGGAAGAGGAAGACA 58.056 55.000 0.00 0.00 33.47 3.41
1603 2885 1.136329 AGGCAGTTCCCTGATGGTGT 61.136 55.000 0.00 0.00 41.50 4.16
1638 2920 1.526575 CTCGTTGCCAAATGCCTGGT 61.527 55.000 0.00 0.00 38.86 4.00
1794 3076 2.122783 TTTACAGCTTTGGATCCCGG 57.877 50.000 9.90 0.00 0.00 5.73
1806 3088 6.597280 AGAATTGAGTTGAGGAGATTTACAGC 59.403 38.462 0.00 0.00 0.00 4.40
2024 3541 9.522804 AACTGTCTCGCAAATAAATTTACAAAA 57.477 25.926 0.00 0.00 0.00 2.44
2145 3770 4.067944 AGTATTTCCAGAGTGAGGGAGT 57.932 45.455 0.00 0.00 34.02 3.85
2147 3772 4.168101 ACAAGTATTTCCAGAGTGAGGGA 58.832 43.478 0.00 0.00 0.00 4.20
2148 3773 4.508662 GACAAGTATTTCCAGAGTGAGGG 58.491 47.826 0.00 0.00 0.00 4.30
2150 3775 4.082190 TCGGACAAGTATTTCCAGAGTGAG 60.082 45.833 0.00 0.00 0.00 3.51
2151 3776 3.830178 TCGGACAAGTATTTCCAGAGTGA 59.170 43.478 0.00 0.00 0.00 3.41
2152 3777 4.177026 CTCGGACAAGTATTTCCAGAGTG 58.823 47.826 0.00 0.00 32.48 3.51
2153 3778 3.195825 CCTCGGACAAGTATTTCCAGAGT 59.804 47.826 0.00 0.00 33.93 3.24
2154 3779 3.447586 TCCTCGGACAAGTATTTCCAGAG 59.552 47.826 0.00 0.00 34.76 3.35
2155 3780 3.437213 TCCTCGGACAAGTATTTCCAGA 58.563 45.455 0.00 0.00 0.00 3.86
2156 3781 3.887621 TCCTCGGACAAGTATTTCCAG 57.112 47.619 0.00 0.00 0.00 3.86
2157 3782 4.513442 CATTCCTCGGACAAGTATTTCCA 58.487 43.478 0.00 0.00 0.00 3.53
2158 3783 3.877508 CCATTCCTCGGACAAGTATTTCC 59.122 47.826 0.00 0.00 0.00 3.13
2159 3784 4.766375 TCCATTCCTCGGACAAGTATTTC 58.234 43.478 0.00 0.00 0.00 2.17
2160 3785 4.837093 TCCATTCCTCGGACAAGTATTT 57.163 40.909 0.00 0.00 0.00 1.40
2161 3786 4.164221 ACATCCATTCCTCGGACAAGTATT 59.836 41.667 0.00 0.00 34.69 1.89
2162 3787 3.711704 ACATCCATTCCTCGGACAAGTAT 59.288 43.478 0.00 0.00 34.69 2.12
2163 3788 3.104512 ACATCCATTCCTCGGACAAGTA 58.895 45.455 0.00 0.00 34.69 2.24
2164 3789 1.909302 ACATCCATTCCTCGGACAAGT 59.091 47.619 0.00 0.00 34.69 3.16
2165 3790 2.698855 ACATCCATTCCTCGGACAAG 57.301 50.000 0.00 0.00 34.69 3.16
2166 3791 3.967326 AGATACATCCATTCCTCGGACAA 59.033 43.478 0.00 0.00 34.69 3.18
2167 3792 3.576861 AGATACATCCATTCCTCGGACA 58.423 45.455 0.00 0.00 34.69 4.02
2168 3793 5.010933 TCTAGATACATCCATTCCTCGGAC 58.989 45.833 0.00 0.00 34.69 4.79
2169 3794 5.256806 TCTAGATACATCCATTCCTCGGA 57.743 43.478 0.00 0.00 36.84 4.55
2170 3795 5.420421 ACATCTAGATACATCCATTCCTCGG 59.580 44.000 4.54 0.00 0.00 4.63
2171 3796 6.522625 ACATCTAGATACATCCATTCCTCG 57.477 41.667 4.54 0.00 0.00 4.63
2220 3845 6.920569 AATACTTGTCGTGGAAATGGATAC 57.079 37.500 0.00 0.00 0.00 2.24
2221 3846 6.540914 GGAAATACTTGTCGTGGAAATGGATA 59.459 38.462 0.00 0.00 0.00 2.59
2222 3847 5.357032 GGAAATACTTGTCGTGGAAATGGAT 59.643 40.000 0.00 0.00 0.00 3.41
2223 3848 4.698304 GGAAATACTTGTCGTGGAAATGGA 59.302 41.667 0.00 0.00 0.00 3.41
2224 3849 4.436852 CGGAAATACTTGTCGTGGAAATGG 60.437 45.833 0.00 0.00 0.00 3.16
2225 3850 4.436852 CCGGAAATACTTGTCGTGGAAATG 60.437 45.833 0.00 0.00 0.00 2.32
2226 3851 3.687698 CCGGAAATACTTGTCGTGGAAAT 59.312 43.478 0.00 0.00 0.00 2.17
2227 3852 3.068560 CCGGAAATACTTGTCGTGGAAA 58.931 45.455 0.00 0.00 0.00 3.13
2228 3853 2.299582 TCCGGAAATACTTGTCGTGGAA 59.700 45.455 0.00 0.00 0.00 3.53
2229 3854 1.894466 TCCGGAAATACTTGTCGTGGA 59.106 47.619 0.00 0.00 0.00 4.02
2230 3855 1.997606 GTCCGGAAATACTTGTCGTGG 59.002 52.381 5.23 0.00 0.00 4.94
2231 3856 1.652124 CGTCCGGAAATACTTGTCGTG 59.348 52.381 5.23 0.00 0.00 4.35
2232 3857 1.403249 CCGTCCGGAAATACTTGTCGT 60.403 52.381 5.23 0.00 37.50 4.34
2233 3858 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
2234 3859 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2235 3860 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2236 3861 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2237 3862 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2238 3863 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2239 3864 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2240 3865 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2241 3866 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2242 3867 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
2243 3868 0.466922 GATACTCCCTCCGTCCGGAA 60.467 60.000 5.23 0.00 44.66 4.30
2244 3869 1.150081 GATACTCCCTCCGTCCGGA 59.850 63.158 0.00 0.00 42.90 5.14
2245 3870 1.152819 TGATACTCCCTCCGTCCGG 60.153 63.158 0.00 0.00 0.00 5.14
2246 3871 0.750546 TGTGATACTCCCTCCGTCCG 60.751 60.000 0.00 0.00 0.00 4.79
2247 3872 0.745468 GTGTGATACTCCCTCCGTCC 59.255 60.000 0.00 0.00 0.00 4.79
2248 3873 1.134560 GTGTGTGATACTCCCTCCGTC 59.865 57.143 0.00 0.00 0.00 4.79
2249 3874 1.183549 GTGTGTGATACTCCCTCCGT 58.816 55.000 0.00 0.00 0.00 4.69
2250 3875 0.460311 GGTGTGTGATACTCCCTCCG 59.540 60.000 0.00 0.00 37.04 4.63
2251 3876 1.757699 GAGGTGTGTGATACTCCCTCC 59.242 57.143 7.16 0.00 42.63 4.30
2252 3877 2.741145 AGAGGTGTGTGATACTCCCTC 58.259 52.381 9.44 9.44 42.63 4.30
2253 3878 2.930109 AGAGGTGTGTGATACTCCCT 57.070 50.000 0.00 0.00 42.63 4.20
2254 3879 5.364157 AGAAATAGAGGTGTGTGATACTCCC 59.636 44.000 0.00 0.00 42.63 4.30
2255 3880 6.127310 ACAGAAATAGAGGTGTGTGATACTCC 60.127 42.308 0.00 0.00 42.09 3.85
2256 3881 6.868622 ACAGAAATAGAGGTGTGTGATACTC 58.131 40.000 0.00 0.00 0.00 2.59
2257 3882 6.437477 TGACAGAAATAGAGGTGTGTGATACT 59.563 38.462 0.00 0.00 0.00 2.12
2258 3883 6.631016 TGACAGAAATAGAGGTGTGTGATAC 58.369 40.000 0.00 0.00 0.00 2.24
2259 3884 6.850752 TGACAGAAATAGAGGTGTGTGATA 57.149 37.500 0.00 0.00 0.00 2.15
2285 3910 4.701651 TGAACTTTCTGGCTATCACCATTG 59.298 41.667 0.00 0.00 39.54 2.82
2401 4028 4.589216 AAACCAGGATTGTTCACATGTG 57.411 40.909 20.18 20.18 0.00 3.21
2464 4091 3.935203 CGATGCACTAGTTTGGACAGAAT 59.065 43.478 0.00 0.00 0.00 2.40
2551 4182 6.428159 AGCATTGTATATGGTTAGTAGCTTGC 59.572 38.462 0.00 0.00 0.00 4.01
2694 4327 4.675510 CGCATTTGATTATGGAACTGCTT 58.324 39.130 0.00 0.00 0.00 3.91
2699 4332 2.032799 TCGGCGCATTTGATTATGGAAC 59.967 45.455 10.83 0.00 0.00 3.62
2779 4412 4.825445 AGAGAGAGAGAGAGAGGAGAGAT 58.175 47.826 0.00 0.00 0.00 2.75
2806 4581 7.465353 TTGCATGGATAAAACAATGAGAGAA 57.535 32.000 0.00 0.00 0.00 2.87
3044 4827 0.534203 GGCAGAAACAGGTGACCGAA 60.534 55.000 0.00 0.00 0.00 4.30
3120 4913 3.502979 GCCAACCACAAAATGCATTTCAT 59.497 39.130 24.28 12.98 36.87 2.57
3213 5008 2.092103 AGGGGCAAACTAACAACTCACA 60.092 45.455 0.00 0.00 0.00 3.58
3359 5160 1.627864 AACCAACCAGGCACCAATAC 58.372 50.000 0.00 0.00 43.14 1.89
3446 5372 5.413833 GGTGCTTCATATTGACATCCCTATG 59.586 44.000 0.00 0.00 39.17 2.23
3510 5436 6.403636 GCAGCCTTCATAACAATAATATCCCG 60.404 42.308 0.00 0.00 0.00 5.14
3517 5455 4.015764 TGCTGCAGCCTTCATAACAATAA 58.984 39.130 34.64 8.93 41.18 1.40
3535 5473 1.799519 GTCGTCTGAGTCGCTGCTG 60.800 63.158 0.00 0.00 0.00 4.41
3573 5511 4.925646 GGCTCAGCAAAAAGGTTAAAGATG 59.074 41.667 0.00 0.00 0.00 2.90
3576 5514 4.590850 AGGCTCAGCAAAAAGGTTAAAG 57.409 40.909 0.00 0.00 0.00 1.85
3582 5523 2.029918 GGTACAAGGCTCAGCAAAAAGG 60.030 50.000 0.00 0.00 0.00 3.11
3583 5524 2.622942 TGGTACAAGGCTCAGCAAAAAG 59.377 45.455 0.00 0.00 31.92 2.27
3681 5625 6.817765 AATGGCATTACCGTCCAAATATAG 57.182 37.500 11.81 0.00 43.94 1.31
3773 5717 9.667107 CCTACAGAAATAAATACAGGAGAAACA 57.333 33.333 0.00 0.00 0.00 2.83
3781 5725 7.465513 GCAACCGTCCTACAGAAATAAATACAG 60.466 40.741 0.00 0.00 0.00 2.74
3802 5749 3.119245 TCCTACACGTTCTATCAGCAACC 60.119 47.826 0.00 0.00 0.00 3.77
3813 5760 3.364023 CGTCAACATCTTCCTACACGTTC 59.636 47.826 0.00 0.00 0.00 3.95
3822 5769 2.750888 GCCGCCGTCAACATCTTCC 61.751 63.158 0.00 0.00 0.00 3.46
3832 5779 3.090219 ATAGTTGGAGGCCGCCGTC 62.090 63.158 21.59 15.60 0.00 4.79
3835 5782 1.227674 CTCATAGTTGGAGGCCGCC 60.228 63.158 20.28 20.28 0.00 6.13
3845 5792 3.026694 GGCATCAAAAGCCCTCATAGTT 58.973 45.455 0.00 0.00 46.50 2.24
3863 5810 2.032799 GTCAAAAGTCATGTTGTCGGCA 59.967 45.455 0.00 0.00 0.00 5.69
4093 6797 9.477484 GCATACTTAACATAGTACTGCATACTT 57.523 33.333 5.39 0.99 41.71 2.24
4094 6798 8.638873 TGCATACTTAACATAGTACTGCATACT 58.361 33.333 5.39 11.76 46.39 2.12
4095 6799 8.812147 TGCATACTTAACATAGTACTGCATAC 57.188 34.615 5.39 0.00 38.58 2.39
4096 6800 9.996554 ATTGCATACTTAACATAGTACTGCATA 57.003 29.630 5.39 0.00 40.51 3.14
4097 6801 8.908786 ATTGCATACTTAACATAGTACTGCAT 57.091 30.769 5.39 0.00 40.51 3.96
4098 6802 9.256477 GTATTGCATACTTAACATAGTACTGCA 57.744 33.333 5.39 0.00 39.93 4.41
4099 6803 9.477484 AGTATTGCATACTTAACATAGTACTGC 57.523 33.333 5.39 0.00 43.27 4.40
4206 6910 5.180117 GGCATCACTATGATTGATTAAGCGT 59.820 40.000 0.00 0.00 34.28 5.07
4207 6911 5.391310 GGGCATCACTATGATTGATTAAGCG 60.391 44.000 0.00 0.00 34.28 4.68
4254 6958 1.129251 CACAACATGCGCCTACTTCAG 59.871 52.381 4.18 0.00 0.00 3.02
4255 6959 1.155889 CACAACATGCGCCTACTTCA 58.844 50.000 4.18 0.00 0.00 3.02
4303 7007 3.959991 GAGCCTCCCGTTCACCAGC 62.960 68.421 0.00 0.00 0.00 4.85
4304 7008 2.232298 GAGAGCCTCCCGTTCACCAG 62.232 65.000 0.00 0.00 0.00 4.00
4305 7009 2.203788 AGAGCCTCCCGTTCACCA 60.204 61.111 0.00 0.00 0.00 4.17
4322 7026 1.194218 TCCTCCATCATGTCGCTTGA 58.806 50.000 0.00 0.00 0.00 3.02
4331 7035 3.094572 CTGCAAAAGGTTCCTCCATCAT 58.905 45.455 0.00 0.00 39.02 2.45
4332 7036 2.517959 CTGCAAAAGGTTCCTCCATCA 58.482 47.619 0.00 0.00 39.02 3.07
4333 7037 1.821136 CCTGCAAAAGGTTCCTCCATC 59.179 52.381 0.00 0.00 41.74 3.51
4388 7092 0.108424 GAGAGTCCGAAGCATGCTGT 60.108 55.000 23.48 11.61 0.00 4.40
4399 7103 0.107312 TCTTAGTCCCCGAGAGTCCG 60.107 60.000 0.00 0.00 0.00 4.79
4410 7114 3.421844 ACAGTGGCCATTTTCTTAGTCC 58.578 45.455 9.72 0.00 0.00 3.85
4444 7148 7.468141 ACGTATAGATGAATAAGATGCTGGA 57.532 36.000 0.00 0.00 0.00 3.86
4446 7150 8.978564 AGAACGTATAGATGAATAAGATGCTG 57.021 34.615 0.00 0.00 0.00 4.41
4460 7164 9.865321 ACTACAAAATTGCTTAGAACGTATAGA 57.135 29.630 0.00 0.00 0.00 1.98
4556 7280 5.121380 ACTTGAATAGTTGCAGGGATGAT 57.879 39.130 0.00 0.00 31.29 2.45
4566 7290 9.294030 GCCTTATTGATCAAACTTGAATAGTTG 57.706 33.333 13.09 0.00 46.34 3.16
4584 7308 1.496429 ACCATCCCTCAGGCCTTATTG 59.504 52.381 0.00 0.00 0.00 1.90
4610 7334 3.306019 CCCTGTAAATTGCCTGTTGGTTC 60.306 47.826 0.00 0.00 35.27 3.62
4613 7337 2.524306 TCCCTGTAAATTGCCTGTTGG 58.476 47.619 0.00 0.00 0.00 3.77
4617 7341 5.652014 TGTCTAAATCCCTGTAAATTGCCTG 59.348 40.000 0.00 0.00 0.00 4.85
4618 7342 5.652452 GTGTCTAAATCCCTGTAAATTGCCT 59.348 40.000 0.00 0.00 0.00 4.75
4623 7347 4.226620 ACCCGTGTCTAAATCCCTGTAAAT 59.773 41.667 0.00 0.00 0.00 1.40
4646 7370 0.893270 CAATTGGTGGTCCAGCCGAA 60.893 55.000 18.34 7.41 45.22 4.30
4676 7400 8.739972 GTTGAATGTTTAGAAGGACAATGGTAT 58.260 33.333 0.00 0.00 0.00 2.73
4677 7401 7.175990 GGTTGAATGTTTAGAAGGACAATGGTA 59.824 37.037 0.00 0.00 0.00 3.25
4678 7402 6.015434 GGTTGAATGTTTAGAAGGACAATGGT 60.015 38.462 0.00 0.00 0.00 3.55
4679 7403 6.015519 TGGTTGAATGTTTAGAAGGACAATGG 60.016 38.462 0.00 0.00 0.00 3.16
4681 7405 6.549364 TGTGGTTGAATGTTTAGAAGGACAAT 59.451 34.615 0.00 0.00 0.00 2.71
4682 7406 5.888724 TGTGGTTGAATGTTTAGAAGGACAA 59.111 36.000 0.00 0.00 0.00 3.18
4683 7407 5.441500 TGTGGTTGAATGTTTAGAAGGACA 58.558 37.500 0.00 0.00 0.00 4.02
4723 7463 7.982919 TCGTCGAAAATCCTGAAATAAATCCTA 59.017 33.333 0.00 0.00 0.00 2.94
4724 7464 6.821665 TCGTCGAAAATCCTGAAATAAATCCT 59.178 34.615 0.00 0.00 0.00 3.24
4735 7475 0.315382 GCGCATCGTCGAAAATCCTG 60.315 55.000 0.30 0.00 0.00 3.86
4736 7476 1.752501 CGCGCATCGTCGAAAATCCT 61.753 55.000 8.75 0.00 0.00 3.24
4747 7487 0.025001 CTCCAACTAAACGCGCATCG 59.975 55.000 5.73 0.00 45.38 3.84
4755 7495 4.084693 CGAAAACGTCTCCTCCAACTAAAC 60.085 45.833 0.00 0.00 0.00 2.01
4756 7496 4.053295 CGAAAACGTCTCCTCCAACTAAA 58.947 43.478 0.00 0.00 0.00 1.85
4758 7498 2.624838 ACGAAAACGTCTCCTCCAACTA 59.375 45.455 0.00 0.00 0.00 2.24
4789 7529 1.651987 ACGAAATCACCATAGGCACG 58.348 50.000 0.00 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.