Multiple sequence alignment - TraesCS2D01G546800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G546800 chr2D 100.000 4040 0 0 1 4040 623393644 623389605 0.000000e+00 7461.0
1 TraesCS2D01G546800 chr2D 97.059 170 5 0 3871 4040 72386740 72386571 1.840000e-73 287.0
2 TraesCS2D01G546800 chr2A 90.890 2854 206 32 699 3512 754569205 754566366 0.000000e+00 3781.0
3 TraesCS2D01G546800 chr2A 83.590 585 51 30 1 552 43844905 43844333 1.300000e-139 507.0
4 TraesCS2D01G546800 chr2A 83.106 586 53 31 1 552 43902882 43902309 3.630000e-135 492.0
5 TraesCS2D01G546800 chr2A 96.341 246 9 0 6 251 765414839 765415084 4.860000e-109 405.0
6 TraesCS2D01G546800 chr2A 94.595 259 11 2 1 258 43820668 43820412 8.140000e-107 398.0
7 TraesCS2D01G546800 chr2A 85.047 321 24 9 245 556 765415152 765415457 5.070000e-79 305.0
8 TraesCS2D01G546800 chr2A 94.737 38 1 1 222 258 504331854 504331891 1.570000e-04 58.4
9 TraesCS2D01G546800 chr2B 90.180 2943 192 43 607 3504 765298076 765295186 0.000000e+00 3744.0
10 TraesCS2D01G546800 chr2B 87.396 603 67 5 621 1220 765471658 765472254 0.000000e+00 684.0
11 TraesCS2D01G546800 chr1A 82.957 2394 370 21 718 3101 585354206 585351841 0.000000e+00 2126.0
12 TraesCS2D01G546800 chr1A 88.796 357 12 9 1 357 251375333 251375661 2.910000e-111 412.0
13 TraesCS2D01G546800 chr1A 85.846 325 25 12 245 552 251375651 251375971 3.890000e-85 326.0
14 TraesCS2D01G546800 chr1A 83.186 226 14 12 336 552 540643073 540643283 6.900000e-43 185.0
15 TraesCS2D01G546800 chr1D 83.546 2115 311 23 718 2821 487331135 487329047 0.000000e+00 1943.0
16 TraesCS2D01G546800 chr1D 96.045 177 6 1 3864 4040 462312979 462313154 1.840000e-73 287.0
17 TraesCS2D01G546800 chr1B 91.964 560 36 3 1 552 20778391 20777833 0.000000e+00 776.0
18 TraesCS2D01G546800 chr1B 96.122 361 14 0 1 361 20755053 20754693 1.250000e-164 590.0
19 TraesCS2D01G546800 chr1B 87.425 167 12 3 394 552 20754694 20754529 2.480000e-42 183.0
20 TraesCS2D01G546800 chr6D 98.805 251 3 0 1 251 79952012 79952262 7.970000e-122 448.0
21 TraesCS2D01G546800 chr6D 91.290 310 8 4 251 552 79952235 79952533 4.860000e-109 405.0
22 TraesCS2D01G546800 chr6D 96.023 176 7 0 3865 4040 291848544 291848719 1.840000e-73 287.0
23 TraesCS2D01G546800 chr7A 89.076 357 11 9 1 357 1868314 1867986 6.250000e-113 418.0
24 TraesCS2D01G546800 chr7A 85.806 310 16 9 251 552 1867687 1867398 1.820000e-78 303.0
25 TraesCS2D01G546800 chr7A 97.196 107 2 1 251 357 1867990 1867885 3.210000e-41 180.0
26 TraesCS2D01G546800 chr6B 85.276 326 27 12 245 553 22940369 22940690 2.340000e-82 316.0
27 TraesCS2D01G546800 chr3D 97.647 170 4 0 3871 4040 560043097 560042928 3.950000e-75 292.0
28 TraesCS2D01G546800 chr3D 97.647 170 4 0 3871 4040 574133704 574133535 3.950000e-75 292.0
29 TraesCS2D01G546800 chrUn 96.045 177 7 0 3864 4040 392216673 392216849 5.110000e-74 289.0
30 TraesCS2D01G546800 chrUn 95.480 177 8 0 3864 4040 68578722 68578546 2.380000e-72 283.0
31 TraesCS2D01G546800 chr7D 96.045 177 7 0 3864 4040 596907328 596907504 5.110000e-74 289.0
32 TraesCS2D01G546800 chr5B 96.045 177 6 1 3864 4040 45654366 45654191 1.840000e-73 287.0
33 TraesCS2D01G546800 chr3B 83.582 67 11 0 741 807 55126590 55126656 3.370000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G546800 chr2D 623389605 623393644 4039 True 7461.000000 7461 100.000000 1 4040 1 chr2D.!!$R2 4039
1 TraesCS2D01G546800 chr2A 754566366 754569205 2839 True 3781.000000 3781 90.890000 699 3512 1 chr2A.!!$R4 2813
2 TraesCS2D01G546800 chr2A 43844333 43844905 572 True 507.000000 507 83.590000 1 552 1 chr2A.!!$R2 551
3 TraesCS2D01G546800 chr2A 43902309 43902882 573 True 492.000000 492 83.106000 1 552 1 chr2A.!!$R3 551
4 TraesCS2D01G546800 chr2A 765414839 765415457 618 False 355.000000 405 90.694000 6 556 2 chr2A.!!$F2 550
5 TraesCS2D01G546800 chr2B 765295186 765298076 2890 True 3744.000000 3744 90.180000 607 3504 1 chr2B.!!$R1 2897
6 TraesCS2D01G546800 chr2B 765471658 765472254 596 False 684.000000 684 87.396000 621 1220 1 chr2B.!!$F1 599
7 TraesCS2D01G546800 chr1A 585351841 585354206 2365 True 2126.000000 2126 82.957000 718 3101 1 chr1A.!!$R1 2383
8 TraesCS2D01G546800 chr1A 251375333 251375971 638 False 369.000000 412 87.321000 1 552 2 chr1A.!!$F2 551
9 TraesCS2D01G546800 chr1D 487329047 487331135 2088 True 1943.000000 1943 83.546000 718 2821 1 chr1D.!!$R1 2103
10 TraesCS2D01G546800 chr1B 20777833 20778391 558 True 776.000000 776 91.964000 1 552 1 chr1B.!!$R1 551
11 TraesCS2D01G546800 chr1B 20754529 20755053 524 True 386.500000 590 91.773500 1 552 2 chr1B.!!$R2 551
12 TraesCS2D01G546800 chr6D 79952012 79952533 521 False 426.500000 448 95.047500 1 552 2 chr6D.!!$F2 551
13 TraesCS2D01G546800 chr7A 1867398 1868314 916 True 300.333333 418 90.692667 1 552 3 chr7A.!!$R1 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
592 1124 0.033366 AAACACCGCCATTTCCAAGC 59.967 50.0 0.0 0.0 0.00 4.01 F
608 1140 0.037232 AAGCGTAGGAGAAGCACCAC 60.037 55.0 0.0 0.0 34.56 4.16 F
1659 2240 0.467384 ACTGGGAGCTTGATGATCGG 59.533 55.0 0.0 0.0 30.59 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1683 2264 0.035317 TGCTGTTGCAGTAGAGTGGG 59.965 55.0 3.71 0.0 45.31 4.61 R
2252 2836 1.030457 CATCTCAGCCCTGAATTGCC 58.970 55.0 0.00 0.0 39.39 4.52 R
3396 4021 0.034089 AGGGCTCGGAATTTGGGAAG 60.034 55.0 0.00 0.0 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
332 531 4.168291 GCAGGGAGAAGGAGGCGG 62.168 72.222 0.00 0.00 0.00 6.13
397 920 3.755628 GAGTGGCGCGACTGGGTA 61.756 66.667 30.34 0.00 0.00 3.69
401 924 4.530857 GGCGCGACTGGGTATGCT 62.531 66.667 12.10 0.00 0.00 3.79
473 996 2.822561 TGTCGCCCTTAATTTTGATGCA 59.177 40.909 0.00 0.00 0.00 3.96
500 1023 5.729229 TCCTACCCTCAAGAAATCAATGGTA 59.271 40.000 0.00 0.00 0.00 3.25
516 1048 6.390504 TCAATGGTATTATACTGGTCCCTCT 58.609 40.000 2.21 0.00 0.00 3.69
541 1073 5.116747 ACTTCAGCAGTATAGGGTACCGTT 61.117 45.833 13.22 2.36 45.69 4.44
568 1100 7.689446 AAAAGCTCTCTATAAAAGGTGGTTC 57.311 36.000 0.00 0.00 0.00 3.62
569 1101 6.628644 AAGCTCTCTATAAAAGGTGGTTCT 57.371 37.500 0.00 0.00 0.00 3.01
570 1102 7.735326 AAGCTCTCTATAAAAGGTGGTTCTA 57.265 36.000 0.00 0.00 0.00 2.10
571 1103 7.922699 AGCTCTCTATAAAAGGTGGTTCTAT 57.077 36.000 0.00 0.00 0.00 1.98
572 1104 9.435570 AAGCTCTCTATAAAAGGTGGTTCTATA 57.564 33.333 0.00 0.00 0.00 1.31
573 1105 9.435570 AGCTCTCTATAAAAGGTGGTTCTATAA 57.564 33.333 0.00 0.00 0.00 0.98
580 1112 5.952526 AAAGGTGGTTCTATAAAACACCG 57.047 39.130 16.89 0.00 36.39 4.94
581 1113 3.340928 AGGTGGTTCTATAAAACACCGC 58.659 45.455 16.89 10.04 38.82 5.68
582 1114 3.752412 GTGGTTCTATAAAACACCGCC 57.248 47.619 0.00 0.00 34.28 6.13
583 1115 3.075884 GTGGTTCTATAAAACACCGCCA 58.924 45.455 0.00 0.00 34.28 5.69
584 1116 3.692593 GTGGTTCTATAAAACACCGCCAT 59.307 43.478 0.00 0.00 34.28 4.40
585 1117 4.157105 GTGGTTCTATAAAACACCGCCATT 59.843 41.667 0.00 0.00 34.28 3.16
586 1118 4.767928 TGGTTCTATAAAACACCGCCATTT 59.232 37.500 0.00 0.00 31.24 2.32
587 1119 5.106078 TGGTTCTATAAAACACCGCCATTTC 60.106 40.000 0.00 0.00 31.24 2.17
588 1120 5.337554 GTTCTATAAAACACCGCCATTTCC 58.662 41.667 0.00 0.00 0.00 3.13
589 1121 4.590918 TCTATAAAACACCGCCATTTCCA 58.409 39.130 0.00 0.00 0.00 3.53
590 1122 5.010933 TCTATAAAACACCGCCATTTCCAA 58.989 37.500 0.00 0.00 0.00 3.53
591 1123 2.524569 AAAACACCGCCATTTCCAAG 57.475 45.000 0.00 0.00 0.00 3.61
592 1124 0.033366 AAACACCGCCATTTCCAAGC 59.967 50.000 0.00 0.00 0.00 4.01
597 1129 1.721487 CGCCATTTCCAAGCGTAGG 59.279 57.895 0.00 0.00 44.65 3.18
598 1130 0.742990 CGCCATTTCCAAGCGTAGGA 60.743 55.000 0.00 0.00 44.65 2.94
599 1131 1.017387 GCCATTTCCAAGCGTAGGAG 58.983 55.000 0.00 0.00 36.33 3.69
600 1132 1.406887 GCCATTTCCAAGCGTAGGAGA 60.407 52.381 0.00 0.00 36.33 3.71
601 1133 2.939640 GCCATTTCCAAGCGTAGGAGAA 60.940 50.000 0.00 0.00 36.33 2.87
602 1134 2.939103 CCATTTCCAAGCGTAGGAGAAG 59.061 50.000 0.00 0.00 36.33 2.85
603 1135 2.094762 TTTCCAAGCGTAGGAGAAGC 57.905 50.000 0.00 0.00 36.33 3.86
604 1136 0.973632 TTCCAAGCGTAGGAGAAGCA 59.026 50.000 0.00 0.00 36.33 3.91
605 1137 0.246635 TCCAAGCGTAGGAGAAGCAC 59.753 55.000 0.00 0.00 34.56 4.40
606 1138 0.741221 CCAAGCGTAGGAGAAGCACC 60.741 60.000 0.00 0.00 34.56 5.01
607 1139 0.037326 CAAGCGTAGGAGAAGCACCA 60.037 55.000 0.00 0.00 34.56 4.17
608 1140 0.037232 AAGCGTAGGAGAAGCACCAC 60.037 55.000 0.00 0.00 34.56 4.16
609 1141 1.805945 GCGTAGGAGAAGCACCACG 60.806 63.158 0.00 0.00 36.15 4.94
610 1142 1.805945 CGTAGGAGAAGCACCACGC 60.806 63.158 0.00 0.00 42.91 5.34
611 1143 1.448013 GTAGGAGAAGCACCACGCC 60.448 63.158 0.00 0.00 44.04 5.68
612 1144 1.911269 TAGGAGAAGCACCACGCCA 60.911 57.895 0.00 0.00 44.04 5.69
613 1145 1.888436 TAGGAGAAGCACCACGCCAG 61.888 60.000 0.00 0.00 44.04 4.85
614 1146 2.031163 GAGAAGCACCACGCCAGT 59.969 61.111 0.00 0.00 44.04 4.00
615 1147 1.292223 GAGAAGCACCACGCCAGTA 59.708 57.895 0.00 0.00 44.04 2.74
616 1148 0.737715 GAGAAGCACCACGCCAGTAG 60.738 60.000 0.00 0.00 44.04 2.57
617 1149 1.004918 GAAGCACCACGCCAGTAGT 60.005 57.895 0.00 0.00 44.04 2.73
669 1201 1.890979 CATCCAGCCATGTCTCCGC 60.891 63.158 0.00 0.00 0.00 5.54
696 1228 1.227497 GGGCTTCTCCTGCTCATCG 60.227 63.158 0.00 0.00 34.39 3.84
706 1260 0.754957 CTGCTCATCGTCCTCCCTCT 60.755 60.000 0.00 0.00 0.00 3.69
707 1261 1.039785 TGCTCATCGTCCTCCCTCTG 61.040 60.000 0.00 0.00 0.00 3.35
714 1268 2.204034 TCCTCCCTCTGTGCCACA 59.796 61.111 0.00 0.00 0.00 4.17
739 1293 3.319198 GGACACCCTCTCGCCCAA 61.319 66.667 0.00 0.00 0.00 4.12
834 1388 2.504274 AACTTCTCCGACGGCACCA 61.504 57.895 9.66 0.00 0.00 4.17
835 1389 2.432628 CTTCTCCGACGGCACCAC 60.433 66.667 9.66 0.00 0.00 4.16
836 1390 3.220999 CTTCTCCGACGGCACCACA 62.221 63.158 9.66 0.00 0.00 4.17
878 1432 1.152922 GTTCCACACGGTCCCCAAA 60.153 57.895 0.00 0.00 0.00 3.28
921 1486 4.367023 CGAGAACCCCGTCGCCAA 62.367 66.667 0.00 0.00 0.00 4.52
922 1487 2.267961 GAGAACCCCGTCGCCAAT 59.732 61.111 0.00 0.00 0.00 3.16
923 1488 1.814169 GAGAACCCCGTCGCCAATC 60.814 63.158 0.00 0.00 0.00 2.67
924 1489 2.240162 GAGAACCCCGTCGCCAATCT 62.240 60.000 0.00 0.00 0.00 2.40
925 1490 1.814169 GAACCCCGTCGCCAATCTC 60.814 63.158 0.00 0.00 0.00 2.75
926 1491 2.515996 GAACCCCGTCGCCAATCTCA 62.516 60.000 0.00 0.00 0.00 3.27
981 1558 2.674563 CTTGCCGTCCACCACCAGAA 62.675 60.000 0.00 0.00 0.00 3.02
1002 1579 1.374947 CCACGGTCTGGTCCACAAT 59.625 57.895 0.00 0.00 34.90 2.71
1015 1593 1.732917 CACAATGCCAACACCACGT 59.267 52.632 0.00 0.00 0.00 4.49
1062 1640 2.226437 CGACAATGGAAACCTTGTCCTG 59.774 50.000 17.97 8.81 45.36 3.86
1092 1670 2.813908 GGCGCGTCCAATTCGTCT 60.814 61.111 8.43 0.00 34.01 4.18
1164 1742 2.026262 TGGGAAGATAGGCTGGAACAAC 60.026 50.000 0.00 0.00 38.70 3.32
1253 1831 4.250464 TCTTACGAGTTATTTGGCCACAG 58.750 43.478 3.88 0.00 0.00 3.66
1277 1858 4.819630 TGGTGACACTTCCATTGTTTCTAC 59.180 41.667 5.39 0.00 33.40 2.59
1399 1980 3.281727 TCACCAGCAACAAAGAAGAGT 57.718 42.857 0.00 0.00 0.00 3.24
1480 2061 0.804989 CGGTCAAATGAAGGTGCTCC 59.195 55.000 0.00 0.00 0.00 4.70
1497 2078 1.913762 CCTGTGGTTCGAGGGGTCT 60.914 63.158 0.00 0.00 0.00 3.85
1659 2240 0.467384 ACTGGGAGCTTGATGATCGG 59.533 55.000 0.00 0.00 30.59 4.18
1683 2264 2.548480 GGCTGGATGCGTAAGAAATACC 59.452 50.000 0.00 0.00 44.05 2.73
1714 2298 3.536570 TGCAACAGCAACAACAGTAGTA 58.463 40.909 0.00 0.00 34.85 1.82
1715 2299 3.559655 TGCAACAGCAACAACAGTAGTAG 59.440 43.478 0.00 0.00 34.85 2.57
1783 2367 1.001764 CCTGCTGATGCCAGGAACA 60.002 57.895 1.23 0.00 40.30 3.18
1871 2455 1.753930 TCGTACGATCAAGGTGCCTA 58.246 50.000 15.28 0.00 0.00 3.93
1893 2477 1.164411 CCATTTGGCACGACAAGCTA 58.836 50.000 0.00 0.00 0.00 3.32
1900 2484 2.076863 GGCACGACAAGCTACTCAATT 58.923 47.619 0.00 0.00 0.00 2.32
1906 2490 3.181520 CGACAAGCTACTCAATTTTCGGG 60.182 47.826 0.00 0.00 0.00 5.14
1909 2493 5.010282 ACAAGCTACTCAATTTTCGGGAAT 58.990 37.500 0.00 0.00 0.00 3.01
2252 2836 2.685380 AGTCCGCCAAGGGGAGAG 60.685 66.667 4.54 0.00 45.18 3.20
2269 2853 0.254178 GAGGCAATTCAGGGCTGAGA 59.746 55.000 0.00 0.00 41.74 3.27
2346 2930 0.890996 GCCAAGGTGACAGGAGGTTG 60.891 60.000 0.00 0.00 0.00 3.77
2361 2945 3.368116 GGAGGTTGCTTGTGTACGAGTAT 60.368 47.826 0.00 0.00 0.00 2.12
2400 2984 3.845992 TGGATCACCATCTCTTCCAAAGA 59.154 43.478 0.00 0.00 41.77 2.52
2422 3006 0.903924 TGGCATGGTGTTGGATTGGG 60.904 55.000 0.00 0.00 0.00 4.12
2424 3008 1.899617 CATGGTGTTGGATTGGGCC 59.100 57.895 0.00 0.00 0.00 5.80
2426 3010 0.043032 ATGGTGTTGGATTGGGCCAT 59.957 50.000 7.26 0.00 37.86 4.40
2430 3014 0.703488 TGTTGGATTGGGCCATCAGA 59.297 50.000 7.26 0.00 37.86 3.27
2431 3015 1.106285 GTTGGATTGGGCCATCAGAC 58.894 55.000 7.26 6.19 37.86 3.51
2440 3024 3.772387 TGGGCCATCAGACACAAAATAA 58.228 40.909 0.00 0.00 0.00 1.40
2448 3032 3.572255 TCAGACACAAAATAACCCTTGGC 59.428 43.478 0.00 0.00 0.00 4.52
2489 3073 2.216750 CTGCATTCAAGTTGCCGGGG 62.217 60.000 2.18 0.00 39.39 5.73
2504 3088 1.476833 CCGGGGCTGCATTATACACTT 60.477 52.381 0.50 0.00 0.00 3.16
2664 3248 0.035152 AATGGATCAGCGGAACTGCA 60.035 50.000 8.34 0.00 46.76 4.41
2736 3320 1.686325 TATCGGGCAGCAGGAAGTCC 61.686 60.000 0.00 0.00 0.00 3.85
2746 3330 0.879765 CAGGAAGTCCAGCAAGCAAG 59.120 55.000 0.00 0.00 38.89 4.01
2812 3396 4.878439 AGTTGCACGTAGTCTTGTTGATA 58.122 39.130 0.00 0.00 41.61 2.15
2814 3398 3.845178 TGCACGTAGTCTTGTTGATAGG 58.155 45.455 0.00 0.00 41.61 2.57
2853 3437 0.322816 ATGCGAAGTTGCTGGGTGAT 60.323 50.000 0.00 0.00 35.36 3.06
2869 3453 2.559440 GTGATGTGAATCTGGAGGAGC 58.441 52.381 0.00 0.00 0.00 4.70
2890 3474 4.158394 AGCTTGAAAGAGTTTGCAAAGTCA 59.842 37.500 36.30 21.10 40.10 3.41
2917 3501 5.355071 TGTTGGTGTATTCAAGATGATGAGC 59.645 40.000 0.00 0.00 0.00 4.26
2928 3512 2.057316 GATGATGAGCTTGATCGACCG 58.943 52.381 0.00 0.00 0.00 4.79
2931 3515 0.248661 ATGAGCTTGATCGACCGACG 60.249 55.000 0.00 0.00 44.09 5.12
2958 3542 0.249911 AGGTGGTGCAGTTTCTCGAC 60.250 55.000 0.00 0.00 0.00 4.20
2988 3572 3.572642 TGAAGTTGAGACACCTCCAGTA 58.427 45.455 0.00 0.00 38.66 2.74
3026 3610 1.927487 ATTGCAGGACAGCCAAATCA 58.073 45.000 0.00 0.00 36.29 2.57
3042 3626 6.995091 AGCCAAATCAGAAGATAATGTAGTCC 59.005 38.462 0.00 0.00 33.08 3.85
3043 3627 6.995091 GCCAAATCAGAAGATAATGTAGTCCT 59.005 38.462 0.00 0.00 33.08 3.85
3048 3632 9.771534 AATCAGAAGATAATGTAGTCCTTAAGC 57.228 33.333 0.00 0.00 33.08 3.09
3091 3678 4.523813 CCTTTTTATATGGTAGTTGCGCG 58.476 43.478 0.00 0.00 0.00 6.86
3130 3735 3.920817 TGGTCTCCCCAACATGCT 58.079 55.556 0.00 0.00 41.50 3.79
3131 3736 3.096852 TGGTCTCCCCAACATGCTA 57.903 52.632 0.00 0.00 41.50 3.49
3132 3737 1.595311 TGGTCTCCCCAACATGCTAT 58.405 50.000 0.00 0.00 41.50 2.97
3133 3738 1.212688 TGGTCTCCCCAACATGCTATG 59.787 52.381 0.00 0.00 41.50 2.23
3134 3739 1.490490 GGTCTCCCCAACATGCTATGA 59.510 52.381 0.00 0.00 0.00 2.15
3139 3748 3.096092 TCCCCAACATGCTATGAAAACC 58.904 45.455 0.00 0.00 0.00 3.27
3150 3759 7.503566 ACATGCTATGAAAACCACTATGCTAAT 59.496 33.333 0.00 0.00 0.00 1.73
3187 3796 1.669999 GCCTGGCTACATTTGGGCTG 61.670 60.000 12.43 0.00 36.96 4.85
3191 3800 1.387295 GGCTACATTTGGGCTGAGGC 61.387 60.000 0.00 0.00 37.82 4.70
3202 3812 2.843730 TGGGCTGAGGCAGAATTAGTTA 59.156 45.455 8.68 0.00 40.87 2.24
3204 3814 2.866762 GGCTGAGGCAGAATTAGTTACG 59.133 50.000 0.00 0.00 40.87 3.18
3212 3822 4.864916 CAGAATTAGTTACGCTGCACAT 57.135 40.909 0.00 0.00 0.00 3.21
3216 3826 6.901887 CAGAATTAGTTACGCTGCACATTAAG 59.098 38.462 0.00 0.00 0.00 1.85
3218 3828 2.422597 AGTTACGCTGCACATTAAGCA 58.577 42.857 0.00 0.00 39.47 3.91
3220 3830 1.802069 TACGCTGCACATTAAGCACA 58.198 45.000 0.00 0.00 39.47 4.57
3244 3854 5.647658 ACTCATGCTTTCATATTTTCGGTCA 59.352 36.000 0.00 0.00 0.00 4.02
3245 3855 6.150976 ACTCATGCTTTCATATTTTCGGTCAA 59.849 34.615 0.00 0.00 0.00 3.18
3263 3873 5.559608 CGGTCAATGCAACTATGTCATGATC 60.560 44.000 0.00 0.00 0.00 2.92
3264 3874 5.438117 GTCAATGCAACTATGTCATGATCG 58.562 41.667 0.00 0.00 0.00 3.69
3267 3889 3.721035 TGCAACTATGTCATGATCGGAG 58.279 45.455 0.00 0.00 0.00 4.63
3271 3893 5.536260 CAACTATGTCATGATCGGAGTCAT 58.464 41.667 0.00 0.00 39.34 3.06
3305 3927 1.737793 CATTTGGGACTCGGTTAGCAC 59.262 52.381 0.00 0.00 0.00 4.40
3307 3929 0.759959 TTGGGACTCGGTTAGCACAA 59.240 50.000 0.00 0.00 0.00 3.33
3354 3979 7.696992 TTCCAGTAACCCTAATGTCAAATTC 57.303 36.000 0.00 0.00 0.00 2.17
3390 4015 8.506168 TCATGAAACGCTAATCCTAAGATTTT 57.494 30.769 0.00 0.00 39.83 1.82
3391 4016 8.956426 TCATGAAACGCTAATCCTAAGATTTTT 58.044 29.630 0.00 0.00 39.83 1.94
3422 4047 3.181476 CCAAATTCCGAGCCCTAAAATGG 60.181 47.826 0.00 0.00 0.00 3.16
3424 4049 2.413310 TTCCGAGCCCTAAAATGGAC 57.587 50.000 0.00 0.00 0.00 4.02
3428 4053 3.456644 TCCGAGCCCTAAAATGGACAATA 59.543 43.478 0.00 0.00 0.00 1.90
3446 4071 0.326595 TACCGAAATGCTTGGCCTCA 59.673 50.000 3.32 0.00 0.00 3.86
3475 4100 0.529992 CCTTGATTACCCCGCTCGAC 60.530 60.000 0.00 0.00 0.00 4.20
3481 4106 0.395311 TTACCCCGCTCGACATCTCT 60.395 55.000 0.00 0.00 0.00 3.10
3483 4108 2.415010 CCCGCTCGACATCTCTGG 59.585 66.667 0.00 0.00 0.00 3.86
3532 4158 4.530857 GTCTCCCCGGACGGCATG 62.531 72.222 0.73 0.00 0.00 4.06
3539 4165 3.864686 CGGACGGCATGCGGAAAG 61.865 66.667 29.51 15.88 38.73 2.62
3540 4166 2.435938 GGACGGCATGCGGAAAGA 60.436 61.111 29.51 0.00 0.00 2.52
3541 4167 2.038269 GGACGGCATGCGGAAAGAA 61.038 57.895 29.51 0.00 0.00 2.52
3542 4168 1.134694 GACGGCATGCGGAAAGAAC 59.865 57.895 29.51 4.26 0.00 3.01
3543 4169 1.573829 GACGGCATGCGGAAAGAACA 61.574 55.000 29.51 0.00 0.00 3.18
3544 4170 1.169661 ACGGCATGCGGAAAGAACAA 61.170 50.000 29.51 0.00 0.00 2.83
3545 4171 0.039617 CGGCATGCGGAAAGAACAAA 60.040 50.000 19.74 0.00 0.00 2.83
3546 4172 1.701704 GGCATGCGGAAAGAACAAAG 58.298 50.000 12.44 0.00 0.00 2.77
3547 4173 1.669795 GGCATGCGGAAAGAACAAAGG 60.670 52.381 12.44 0.00 0.00 3.11
3548 4174 1.701704 CATGCGGAAAGAACAAAGGC 58.298 50.000 0.00 0.00 0.00 4.35
3549 4175 0.240945 ATGCGGAAAGAACAAAGGCG 59.759 50.000 0.00 0.00 0.00 5.52
3550 4176 1.729484 GCGGAAAGAACAAAGGCGC 60.729 57.895 0.00 0.00 0.00 6.53
3551 4177 1.949257 CGGAAAGAACAAAGGCGCT 59.051 52.632 7.64 0.00 0.00 5.92
3552 4178 0.385974 CGGAAAGAACAAAGGCGCTG 60.386 55.000 7.64 0.00 0.00 5.18
3553 4179 0.039165 GGAAAGAACAAAGGCGCTGG 60.039 55.000 7.64 0.00 0.00 4.85
3554 4180 0.951558 GAAAGAACAAAGGCGCTGGA 59.048 50.000 7.64 0.00 0.00 3.86
3555 4181 0.668535 AAAGAACAAAGGCGCTGGAC 59.331 50.000 7.64 0.00 0.00 4.02
3556 4182 1.172812 AAGAACAAAGGCGCTGGACC 61.173 55.000 7.64 0.00 0.00 4.46
3557 4183 1.896660 GAACAAAGGCGCTGGACCA 60.897 57.895 7.64 0.00 0.00 4.02
3558 4184 1.856265 GAACAAAGGCGCTGGACCAG 61.856 60.000 17.83 17.83 34.12 4.00
3594 4220 4.934942 CACCGCACACGTCACCGA 62.935 66.667 0.00 0.00 37.70 4.69
3595 4221 4.936823 ACCGCACACGTCACCGAC 62.937 66.667 0.00 0.00 37.70 4.79
3604 4230 3.281240 GTCACCGACGCCTCCTAA 58.719 61.111 0.00 0.00 0.00 2.69
3605 4231 1.814527 GTCACCGACGCCTCCTAAT 59.185 57.895 0.00 0.00 0.00 1.73
3606 4232 0.527817 GTCACCGACGCCTCCTAATG 60.528 60.000 0.00 0.00 0.00 1.90
3607 4233 0.968901 TCACCGACGCCTCCTAATGT 60.969 55.000 0.00 0.00 0.00 2.71
3608 4234 0.527817 CACCGACGCCTCCTAATGTC 60.528 60.000 0.00 0.00 0.00 3.06
3609 4235 4.303853 CGACGCCTCCTAATGTCG 57.696 61.111 0.00 0.00 46.57 4.35
3610 4236 1.944676 CGACGCCTCCTAATGTCGC 60.945 63.158 0.45 0.00 46.11 5.19
3611 4237 1.591863 GACGCCTCCTAATGTCGCC 60.592 63.158 0.00 0.00 0.00 5.54
3612 4238 2.280186 CGCCTCCTAATGTCGCCC 60.280 66.667 0.00 0.00 0.00 6.13
3613 4239 2.111251 GCCTCCTAATGTCGCCCC 59.889 66.667 0.00 0.00 0.00 5.80
3614 4240 2.421739 CCTCCTAATGTCGCCCCG 59.578 66.667 0.00 0.00 0.00 5.73
3615 4241 2.421739 CTCCTAATGTCGCCCCGG 59.578 66.667 0.00 0.00 0.00 5.73
3616 4242 3.809374 CTCCTAATGTCGCCCCGGC 62.809 68.421 0.00 0.00 37.85 6.13
3618 4244 2.895372 CTAATGTCGCCCCGGCAC 60.895 66.667 6.52 4.16 46.32 5.01
3637 4263 4.222847 GGCGACCATCTCCCCGTC 62.223 72.222 0.00 0.00 0.00 4.79
3639 4265 3.138798 CGACCATCTCCCCGTCGT 61.139 66.667 0.00 0.00 43.29 4.34
3640 4266 2.707849 CGACCATCTCCCCGTCGTT 61.708 63.158 0.00 0.00 43.29 3.85
3641 4267 1.141234 GACCATCTCCCCGTCGTTC 59.859 63.158 0.00 0.00 0.00 3.95
3642 4268 2.294132 GACCATCTCCCCGTCGTTCC 62.294 65.000 0.00 0.00 0.00 3.62
3643 4269 2.058595 CCATCTCCCCGTCGTTCCT 61.059 63.158 0.00 0.00 0.00 3.36
3644 4270 1.437986 CATCTCCCCGTCGTTCCTC 59.562 63.158 0.00 0.00 0.00 3.71
3645 4271 1.757340 ATCTCCCCGTCGTTCCTCC 60.757 63.158 0.00 0.00 0.00 4.30
3646 4272 3.823330 CTCCCCGTCGTTCCTCCG 61.823 72.222 0.00 0.00 0.00 4.63
3650 4276 4.065281 CCGTCGTTCCTCCGCCTT 62.065 66.667 0.00 0.00 0.00 4.35
3651 4277 2.809601 CGTCGTTCCTCCGCCTTG 60.810 66.667 0.00 0.00 0.00 3.61
3652 4278 2.342648 GTCGTTCCTCCGCCTTGT 59.657 61.111 0.00 0.00 0.00 3.16
3653 4279 1.588082 GTCGTTCCTCCGCCTTGTA 59.412 57.895 0.00 0.00 0.00 2.41
3654 4280 0.735287 GTCGTTCCTCCGCCTTGTAC 60.735 60.000 0.00 0.00 0.00 2.90
3655 4281 1.447314 CGTTCCTCCGCCTTGTACC 60.447 63.158 0.00 0.00 0.00 3.34
3656 4282 1.675219 GTTCCTCCGCCTTGTACCA 59.325 57.895 0.00 0.00 0.00 3.25
3657 4283 0.672711 GTTCCTCCGCCTTGTACCAC 60.673 60.000 0.00 0.00 0.00 4.16
3658 4284 2.125673 CCTCCGCCTTGTACCACG 60.126 66.667 0.00 0.00 0.00 4.94
3659 4285 2.813908 CTCCGCCTTGTACCACGC 60.814 66.667 0.00 0.00 0.00 5.34
3660 4286 4.728102 TCCGCCTTGTACCACGCG 62.728 66.667 3.53 3.53 44.08 6.01
3710 4336 1.657556 GCGCTAGCTAGGTCTCTGG 59.342 63.158 22.10 0.00 41.01 3.86
3711 4337 1.657556 CGCTAGCTAGGTCTCTGGC 59.342 63.158 22.10 5.13 46.26 4.85
3712 4338 1.801309 CGCTAGCTAGGTCTCTGGCC 61.801 65.000 22.10 0.00 46.98 5.36
3713 4339 1.801309 GCTAGCTAGGTCTCTGGCCG 61.801 65.000 22.10 0.00 46.98 6.13
3714 4340 0.179015 CTAGCTAGGTCTCTGGCCGA 60.179 60.000 13.32 0.00 46.98 5.54
3715 4341 0.179015 TAGCTAGGTCTCTGGCCGAG 60.179 60.000 15.77 15.77 46.98 4.63
3716 4342 2.494530 GCTAGGTCTCTGGCCGAGG 61.495 68.421 19.88 4.58 41.00 4.63
3717 4343 2.442272 TAGGTCTCTGGCCGAGGC 60.442 66.667 19.88 18.70 43.76 4.70
3718 4344 3.296842 TAGGTCTCTGGCCGAGGCA 62.297 63.158 23.99 1.95 46.34 4.75
3719 4345 4.459089 GGTCTCTGGCCGAGGCAC 62.459 72.222 23.99 15.56 46.34 5.01
3720 4346 4.803426 GTCTCTGGCCGAGGCACG 62.803 72.222 19.81 6.03 43.93 5.34
3734 4360 3.423154 CACGCTCCTCCGGCAAAC 61.423 66.667 0.00 0.00 0.00 2.93
3746 4372 2.048316 GCAAACGGGGCCACAATG 60.048 61.111 5.46 0.69 0.00 2.82
3747 4373 2.048316 CAAACGGGGCCACAATGC 60.048 61.111 5.46 0.00 0.00 3.56
3754 4380 4.517815 GGCCACAATGCCGCCATG 62.518 66.667 0.00 0.00 42.54 3.66
3755 4381 4.517815 GCCACAATGCCGCCATGG 62.518 66.667 7.63 7.63 42.50 3.66
3756 4382 2.755064 CCACAATGCCGCCATGGA 60.755 61.111 18.40 0.00 42.00 3.41
3757 4383 2.349672 CCACAATGCCGCCATGGAA 61.350 57.895 18.40 0.00 42.00 3.53
3758 4384 1.153784 CACAATGCCGCCATGGAAC 60.154 57.895 18.40 3.78 42.00 3.62
3759 4385 2.350458 ACAATGCCGCCATGGAACC 61.350 57.895 18.40 2.15 42.00 3.62
3760 4386 2.759560 AATGCCGCCATGGAACCC 60.760 61.111 18.40 0.13 42.00 4.11
3761 4387 3.598747 AATGCCGCCATGGAACCCA 62.599 57.895 18.40 6.60 42.00 4.51
3762 4388 4.738998 TGCCGCCATGGAACCCAG 62.739 66.667 18.40 0.00 42.00 4.45
3764 4390 4.431131 CCGCCATGGAACCCAGCT 62.431 66.667 18.40 0.00 42.00 4.24
3765 4391 3.136123 CGCCATGGAACCCAGCTG 61.136 66.667 18.40 6.78 36.75 4.24
3766 4392 2.757099 GCCATGGAACCCAGCTGG 60.757 66.667 26.87 26.87 36.90 4.85
3767 4393 3.089838 CCATGGAACCCAGCTGGA 58.910 61.111 34.91 14.48 36.14 3.86
3768 4394 1.616921 CCATGGAACCCAGCTGGAT 59.383 57.895 34.91 22.08 36.14 3.41
3769 4395 0.754217 CCATGGAACCCAGCTGGATG 60.754 60.000 34.91 26.06 36.14 3.51
3770 4396 0.754217 CATGGAACCCAGCTGGATGG 60.754 60.000 34.91 19.78 36.75 3.51
3771 4397 1.217057 ATGGAACCCAGCTGGATGGT 61.217 55.000 34.91 20.50 38.81 3.55
3772 4398 1.077429 GGAACCCAGCTGGATGGTC 60.077 63.158 34.91 24.72 38.81 4.02
3773 4399 1.450312 GAACCCAGCTGGATGGTCG 60.450 63.158 34.91 18.23 38.81 4.79
3774 4400 2.185310 GAACCCAGCTGGATGGTCGT 62.185 60.000 34.91 18.94 38.81 4.34
3775 4401 1.779061 AACCCAGCTGGATGGTCGTT 61.779 55.000 34.91 23.54 38.81 3.85
3776 4402 0.907704 ACCCAGCTGGATGGTCGTTA 60.908 55.000 34.91 0.00 38.81 3.18
3777 4403 0.179073 CCCAGCTGGATGGTCGTTAG 60.179 60.000 34.91 9.20 38.81 2.34
3778 4404 0.811616 CCAGCTGGATGGTCGTTAGC 60.812 60.000 29.88 0.00 37.39 3.09
3779 4405 0.811616 CAGCTGGATGGTCGTTAGCC 60.812 60.000 5.57 0.00 35.05 3.93
3780 4406 1.220749 GCTGGATGGTCGTTAGCCA 59.779 57.895 0.00 0.00 40.68 4.75
3787 4413 4.414732 GTCGTTAGCCATCGACCC 57.585 61.111 12.10 0.00 46.83 4.46
3788 4414 1.814527 GTCGTTAGCCATCGACCCT 59.185 57.895 12.10 0.00 46.83 4.34
3789 4415 0.175073 GTCGTTAGCCATCGACCCTT 59.825 55.000 12.10 0.00 46.83 3.95
3790 4416 0.899720 TCGTTAGCCATCGACCCTTT 59.100 50.000 0.00 0.00 0.00 3.11
3791 4417 1.276989 TCGTTAGCCATCGACCCTTTT 59.723 47.619 0.00 0.00 0.00 2.27
3792 4418 1.664151 CGTTAGCCATCGACCCTTTTC 59.336 52.381 0.00 0.00 0.00 2.29
3793 4419 2.014857 GTTAGCCATCGACCCTTTTCC 58.985 52.381 0.00 0.00 0.00 3.13
3794 4420 0.177141 TAGCCATCGACCCTTTTCCG 59.823 55.000 0.00 0.00 0.00 4.30
3795 4421 2.112815 GCCATCGACCCTTTTCCGG 61.113 63.158 0.00 0.00 0.00 5.14
3796 4422 1.298667 CCATCGACCCTTTTCCGGT 59.701 57.895 0.00 0.00 35.88 5.28
3797 4423 1.024579 CCATCGACCCTTTTCCGGTG 61.025 60.000 0.00 0.00 32.27 4.94
3798 4424 1.024579 CATCGACCCTTTTCCGGTGG 61.025 60.000 0.00 0.00 32.27 4.61
3799 4425 1.486145 ATCGACCCTTTTCCGGTGGT 61.486 55.000 0.00 1.38 32.27 4.16
3800 4426 1.964373 CGACCCTTTTCCGGTGGTG 60.964 63.158 0.00 0.00 32.27 4.17
3801 4427 2.203437 ACCCTTTTCCGGTGGTGC 60.203 61.111 0.00 0.00 30.39 5.01
3802 4428 3.361977 CCCTTTTCCGGTGGTGCG 61.362 66.667 0.00 0.00 0.00 5.34
3803 4429 3.361977 CCTTTTCCGGTGGTGCGG 61.362 66.667 0.00 0.00 0.00 5.69
3804 4430 2.593436 CTTTTCCGGTGGTGCGGT 60.593 61.111 0.00 0.00 0.00 5.68
3805 4431 2.902846 TTTTCCGGTGGTGCGGTG 60.903 61.111 0.00 0.00 0.00 4.94
3806 4432 3.402095 TTTTCCGGTGGTGCGGTGA 62.402 57.895 0.00 0.00 0.00 4.02
3807 4433 2.888464 TTTTCCGGTGGTGCGGTGAA 62.888 55.000 0.00 0.00 0.00 3.18
3808 4434 2.888464 TTTCCGGTGGTGCGGTGAAA 62.888 55.000 0.00 0.00 0.00 2.69
3809 4435 2.671619 CCGGTGGTGCGGTGAAAT 60.672 61.111 0.00 0.00 0.00 2.17
3810 4436 2.686816 CCGGTGGTGCGGTGAAATC 61.687 63.158 0.00 0.00 0.00 2.17
3811 4437 2.867472 GGTGGTGCGGTGAAATCG 59.133 61.111 0.00 0.00 0.00 3.34
3812 4438 2.686816 GGTGGTGCGGTGAAATCGG 61.687 63.158 0.00 0.00 0.00 4.18
3813 4439 3.053291 TGGTGCGGTGAAATCGGC 61.053 61.111 0.00 0.00 0.00 5.54
3814 4440 4.160635 GGTGCGGTGAAATCGGCG 62.161 66.667 0.00 0.00 36.64 6.46
3815 4441 4.811761 GTGCGGTGAAATCGGCGC 62.812 66.667 0.00 0.00 36.64 6.53
3817 4443 3.876198 GCGGTGAAATCGGCGCAT 61.876 61.111 10.83 0.00 0.00 4.73
3818 4444 2.023181 CGGTGAAATCGGCGCATG 59.977 61.111 10.83 0.00 0.00 4.06
3819 4445 2.408835 GGTGAAATCGGCGCATGG 59.591 61.111 10.83 0.00 0.00 3.66
3820 4446 2.278142 GTGAAATCGGCGCATGGC 60.278 61.111 10.83 0.00 42.51 4.40
3850 4476 4.963815 CCACCGGCAATGTTGTTC 57.036 55.556 0.00 0.00 0.00 3.18
3851 4477 1.288752 CCACCGGCAATGTTGTTCC 59.711 57.895 0.00 0.00 0.00 3.62
3852 4478 1.459455 CCACCGGCAATGTTGTTCCA 61.459 55.000 0.00 0.00 0.00 3.53
3853 4479 0.318614 CACCGGCAATGTTGTTCCAC 60.319 55.000 0.00 0.00 0.00 4.02
3854 4480 1.288752 CCGGCAATGTTGTTCCACC 59.711 57.895 0.00 0.00 0.00 4.61
3855 4481 1.459455 CCGGCAATGTTGTTCCACCA 61.459 55.000 0.00 0.00 0.00 4.17
3856 4482 0.039256 CGGCAATGTTGTTCCACCAG 60.039 55.000 0.00 0.00 0.00 4.00
3857 4483 0.318120 GGCAATGTTGTTCCACCAGG 59.682 55.000 0.00 0.00 0.00 4.45
3858 4484 0.318120 GCAATGTTGTTCCACCAGGG 59.682 55.000 0.00 0.00 34.83 4.45
3859 4485 0.318120 CAATGTTGTTCCACCAGGGC 59.682 55.000 0.00 0.00 36.21 5.19
3860 4486 0.831711 AATGTTGTTCCACCAGGGCC 60.832 55.000 0.00 0.00 36.21 5.80
3861 4487 1.729267 ATGTTGTTCCACCAGGGCCT 61.729 55.000 0.00 0.00 36.21 5.19
3862 4488 1.152546 GTTGTTCCACCAGGGCCTT 60.153 57.895 1.32 0.00 36.21 4.35
3863 4489 1.152567 TTGTTCCACCAGGGCCTTG 60.153 57.895 8.15 8.15 36.21 3.61
3864 4490 2.283173 GTTCCACCAGGGCCTTGG 60.283 66.667 31.34 31.34 44.09 3.61
3865 4491 3.589542 TTCCACCAGGGCCTTGGG 61.590 66.667 35.00 23.55 42.76 4.12
3879 4505 2.787994 CCTTGGGGCTTATAGCTCATG 58.212 52.381 0.45 0.00 45.62 3.07
3880 4506 2.107204 CCTTGGGGCTTATAGCTCATGT 59.893 50.000 0.45 0.00 45.62 3.21
3881 4507 2.936919 TGGGGCTTATAGCTCATGTG 57.063 50.000 0.45 0.00 45.62 3.21
3882 4508 1.202806 TGGGGCTTATAGCTCATGTGC 60.203 52.381 11.79 11.79 45.62 4.57
3883 4509 1.151668 GGGCTTATAGCTCATGTGCG 58.848 55.000 13.68 1.12 42.59 5.34
3884 4510 1.270305 GGGCTTATAGCTCATGTGCGA 60.270 52.381 13.68 9.47 42.59 5.10
3885 4511 1.795286 GGCTTATAGCTCATGTGCGAC 59.205 52.381 13.68 0.00 41.99 5.19
3886 4512 2.473816 GCTTATAGCTCATGTGCGACA 58.526 47.619 13.68 4.44 38.45 4.35
3887 4513 2.219674 GCTTATAGCTCATGTGCGACAC 59.780 50.000 13.68 3.44 38.45 3.67
3888 4514 4.285254 GCTTATAGCTCATGTGCGACACA 61.285 47.826 13.68 13.63 42.63 3.72
3889 4515 5.559576 GCTTATAGCTCATGTGCGACACAT 61.560 45.833 16.42 16.42 45.73 3.21
3890 4516 6.979374 GCTTATAGCTCATGTGCGACACATT 61.979 44.000 18.66 10.03 44.09 2.71
3891 4517 8.367720 GCTTATAGCTCATGTGCGACACATTT 62.368 42.308 18.66 10.13 44.09 2.32
3892 4518 9.099098 GCTTATAGCTCATGTGCGACACATTTA 62.099 40.741 18.66 11.41 44.09 1.40
3898 4524 2.839975 TGTGCGACACATTTAAGGTGA 58.160 42.857 16.73 0.00 39.62 4.02
3899 4525 3.206964 TGTGCGACACATTTAAGGTGAA 58.793 40.909 16.73 0.00 39.62 3.18
3900 4526 3.818210 TGTGCGACACATTTAAGGTGAAT 59.182 39.130 16.73 0.00 39.62 2.57
3901 4527 4.277174 TGTGCGACACATTTAAGGTGAATT 59.723 37.500 16.73 0.00 39.62 2.17
3902 4528 4.616802 GTGCGACACATTTAAGGTGAATTG 59.383 41.667 16.73 0.37 39.53 2.32
3903 4529 4.165779 GCGACACATTTAAGGTGAATTGG 58.834 43.478 16.73 0.00 39.53 3.16
3904 4530 4.165779 CGACACATTTAAGGTGAATTGGC 58.834 43.478 16.73 0.00 39.53 4.52
3905 4531 4.320861 CGACACATTTAAGGTGAATTGGCA 60.321 41.667 16.73 0.00 39.53 4.92
3906 4532 5.537188 GACACATTTAAGGTGAATTGGCAA 58.463 37.500 16.73 0.68 39.53 4.52
3907 4533 5.540911 ACACATTTAAGGTGAATTGGCAAG 58.459 37.500 16.73 0.00 39.53 4.01
3908 4534 5.304101 ACACATTTAAGGTGAATTGGCAAGA 59.696 36.000 16.73 0.00 39.53 3.02
3909 4535 5.865552 CACATTTAAGGTGAATTGGCAAGAG 59.134 40.000 3.46 0.00 38.54 2.85
3910 4536 5.539955 ACATTTAAGGTGAATTGGCAAGAGT 59.460 36.000 5.96 0.00 0.00 3.24
3911 4537 5.452078 TTTAAGGTGAATTGGCAAGAGTG 57.548 39.130 5.96 0.00 0.00 3.51
3920 4546 3.319904 GCAAGAGTGCGACGTTGT 58.680 55.556 4.37 0.00 41.93 3.32
3921 4547 1.641677 GCAAGAGTGCGACGTTGTT 59.358 52.632 4.37 0.00 41.93 2.83
3922 4548 0.383124 GCAAGAGTGCGACGTTGTTC 60.383 55.000 4.37 0.68 41.93 3.18
3923 4549 0.927537 CAAGAGTGCGACGTTGTTCA 59.072 50.000 4.37 0.00 0.00 3.18
3924 4550 1.326245 CAAGAGTGCGACGTTGTTCAA 59.674 47.619 4.37 0.00 0.00 2.69
3925 4551 1.209128 AGAGTGCGACGTTGTTCAAG 58.791 50.000 4.37 0.00 0.00 3.02
3926 4552 0.383124 GAGTGCGACGTTGTTCAAGC 60.383 55.000 4.37 0.00 0.00 4.01
3927 4553 1.717728 GTGCGACGTTGTTCAAGCG 60.718 57.895 4.37 0.00 0.00 4.68
3928 4554 1.878975 TGCGACGTTGTTCAAGCGA 60.879 52.632 4.37 0.00 0.00 4.93
3929 4555 1.274476 GCGACGTTGTTCAAGCGAA 59.726 52.632 4.37 0.00 0.00 4.70
3930 4556 0.110823 GCGACGTTGTTCAAGCGAAT 60.111 50.000 4.37 0.00 32.61 3.34
3931 4557 1.580439 CGACGTTGTTCAAGCGAATG 58.420 50.000 0.00 0.00 32.61 2.67
3932 4558 1.721489 CGACGTTGTTCAAGCGAATGG 60.721 52.381 0.00 0.00 32.61 3.16
3933 4559 0.040425 ACGTTGTTCAAGCGAATGGC 60.040 50.000 11.82 0.00 44.05 4.40
3942 4568 4.465512 GCGAATGGCTGTGGTGCG 62.466 66.667 0.00 0.00 39.11 5.34
3943 4569 2.741985 CGAATGGCTGTGGTGCGA 60.742 61.111 0.00 0.00 0.00 5.10
3944 4570 2.870372 GAATGGCTGTGGTGCGAC 59.130 61.111 0.00 0.00 0.00 5.19
3945 4571 1.965930 GAATGGCTGTGGTGCGACA 60.966 57.895 0.00 0.00 0.00 4.35
3946 4572 1.514678 GAATGGCTGTGGTGCGACAA 61.515 55.000 0.00 0.00 0.00 3.18
3947 4573 0.895100 AATGGCTGTGGTGCGACAAT 60.895 50.000 0.00 0.00 0.00 2.71
3948 4574 0.895100 ATGGCTGTGGTGCGACAATT 60.895 50.000 0.00 0.00 0.00 2.32
3949 4575 1.106351 TGGCTGTGGTGCGACAATTT 61.106 50.000 0.00 0.00 0.00 1.82
3950 4576 0.031994 GGCTGTGGTGCGACAATTTT 59.968 50.000 0.00 0.00 0.00 1.82
3951 4577 1.130955 GCTGTGGTGCGACAATTTTG 58.869 50.000 0.00 0.00 0.00 2.44
3952 4578 1.268999 GCTGTGGTGCGACAATTTTGA 60.269 47.619 0.00 0.00 0.00 2.69
3953 4579 2.653890 CTGTGGTGCGACAATTTTGAG 58.346 47.619 0.00 0.00 0.00 3.02
3954 4580 1.268999 TGTGGTGCGACAATTTTGAGC 60.269 47.619 0.00 3.39 36.49 4.26
3955 4581 1.028130 TGGTGCGACAATTTTGAGCA 58.972 45.000 11.78 11.78 40.62 4.26
3956 4582 1.001487 TGGTGCGACAATTTTGAGCAG 60.001 47.619 14.67 0.00 42.26 4.24
3957 4583 1.666888 GGTGCGACAATTTTGAGCAGG 60.667 52.381 14.67 0.00 42.26 4.85
3958 4584 1.001378 GTGCGACAATTTTGAGCAGGT 60.001 47.619 14.67 0.00 42.26 4.00
3959 4585 2.225491 GTGCGACAATTTTGAGCAGGTA 59.775 45.455 14.67 0.00 42.26 3.08
3960 4586 2.881513 TGCGACAATTTTGAGCAGGTAA 59.118 40.909 11.78 0.00 39.13 2.85
3961 4587 3.316588 TGCGACAATTTTGAGCAGGTAAA 59.683 39.130 11.78 0.00 39.13 2.01
3962 4588 4.022416 TGCGACAATTTTGAGCAGGTAAAT 60.022 37.500 11.78 0.00 39.13 1.40
3963 4589 5.182190 TGCGACAATTTTGAGCAGGTAAATA 59.818 36.000 11.78 0.00 39.13 1.40
3964 4590 5.739161 GCGACAATTTTGAGCAGGTAAATAG 59.261 40.000 0.00 0.00 36.19 1.73
3965 4591 5.739161 CGACAATTTTGAGCAGGTAAATAGC 59.261 40.000 0.00 0.00 0.00 2.97
3966 4592 5.965922 ACAATTTTGAGCAGGTAAATAGCC 58.034 37.500 0.00 0.00 0.00 3.93
3967 4593 5.105351 ACAATTTTGAGCAGGTAAATAGCCC 60.105 40.000 0.00 0.00 0.00 5.19
3968 4594 3.730215 TTTGAGCAGGTAAATAGCCCA 57.270 42.857 0.00 0.00 0.00 5.36
3969 4595 2.710096 TGAGCAGGTAAATAGCCCAC 57.290 50.000 0.00 0.00 0.00 4.61
3970 4596 1.134521 TGAGCAGGTAAATAGCCCACG 60.135 52.381 0.00 0.00 0.00 4.94
3971 4597 0.463833 AGCAGGTAAATAGCCCACGC 60.464 55.000 0.00 0.00 0.00 5.34
3972 4598 0.746563 GCAGGTAAATAGCCCACGCA 60.747 55.000 0.00 0.00 37.52 5.24
3973 4599 1.014352 CAGGTAAATAGCCCACGCAC 58.986 55.000 0.00 0.00 37.52 5.34
3974 4600 0.461339 AGGTAAATAGCCCACGCACG 60.461 55.000 0.00 0.00 37.52 5.34
3975 4601 0.460635 GGTAAATAGCCCACGCACGA 60.461 55.000 0.00 0.00 37.52 4.35
3976 4602 0.648958 GTAAATAGCCCACGCACGAC 59.351 55.000 0.00 0.00 37.52 4.34
3977 4603 0.246910 TAAATAGCCCACGCACGACA 59.753 50.000 0.00 0.00 37.52 4.35
3978 4604 0.392461 AAATAGCCCACGCACGACAT 60.392 50.000 0.00 0.00 37.52 3.06
3979 4605 1.089481 AATAGCCCACGCACGACATG 61.089 55.000 0.00 0.00 37.52 3.21
3980 4606 2.923426 ATAGCCCACGCACGACATGG 62.923 60.000 0.00 0.00 37.52 3.66
3983 4609 3.792047 CCACGCACGACATGGCTG 61.792 66.667 0.00 0.00 0.00 4.85
3984 4610 3.043713 CACGCACGACATGGCTGT 61.044 61.111 0.00 0.00 38.67 4.40
3985 4611 2.280797 ACGCACGACATGGCTGTT 60.281 55.556 0.00 0.00 35.14 3.16
3986 4612 1.005512 ACGCACGACATGGCTGTTA 60.006 52.632 0.00 0.00 35.14 2.41
3987 4613 0.601576 ACGCACGACATGGCTGTTAA 60.602 50.000 0.00 0.00 35.14 2.01
3988 4614 0.515127 CGCACGACATGGCTGTTAAA 59.485 50.000 0.00 0.00 35.14 1.52
3989 4615 1.724654 CGCACGACATGGCTGTTAAAC 60.725 52.381 0.00 0.00 35.14 2.01
3990 4616 1.535462 GCACGACATGGCTGTTAAACT 59.465 47.619 0.00 0.00 35.14 2.66
3991 4617 2.665519 GCACGACATGGCTGTTAAACTG 60.666 50.000 0.00 0.00 35.14 3.16
3992 4618 2.805671 CACGACATGGCTGTTAAACTGA 59.194 45.455 0.00 0.00 35.14 3.41
3993 4619 3.249799 CACGACATGGCTGTTAAACTGAA 59.750 43.478 0.00 0.00 35.14 3.02
3994 4620 3.250040 ACGACATGGCTGTTAAACTGAAC 59.750 43.478 0.00 0.00 35.14 3.18
3995 4621 3.498397 CGACATGGCTGTTAAACTGAACT 59.502 43.478 0.00 0.00 35.14 3.01
3996 4622 4.611355 CGACATGGCTGTTAAACTGAACTG 60.611 45.833 0.00 0.00 35.14 3.16
3997 4623 4.460263 ACATGGCTGTTAAACTGAACTGA 58.540 39.130 0.00 0.00 31.80 3.41
3998 4624 5.072741 ACATGGCTGTTAAACTGAACTGAT 58.927 37.500 0.00 0.00 31.80 2.90
3999 4625 5.048504 ACATGGCTGTTAAACTGAACTGATG 60.049 40.000 0.00 0.00 31.80 3.07
4000 4626 3.253188 TGGCTGTTAAACTGAACTGATGC 59.747 43.478 0.00 0.00 31.80 3.91
4001 4627 3.366374 GGCTGTTAAACTGAACTGATGCC 60.366 47.826 0.00 0.00 31.80 4.40
4002 4628 3.366374 GCTGTTAAACTGAACTGATGCCC 60.366 47.826 0.00 0.00 31.80 5.36
4003 4629 4.074970 CTGTTAAACTGAACTGATGCCCT 58.925 43.478 0.00 0.00 31.80 5.19
4004 4630 4.072131 TGTTAAACTGAACTGATGCCCTC 58.928 43.478 0.00 0.00 0.00 4.30
4005 4631 1.813513 AAACTGAACTGATGCCCTCG 58.186 50.000 0.00 0.00 0.00 4.63
4006 4632 0.687354 AACTGAACTGATGCCCTCGT 59.313 50.000 0.00 0.00 0.00 4.18
4007 4633 0.687354 ACTGAACTGATGCCCTCGTT 59.313 50.000 0.00 0.00 0.00 3.85
4008 4634 1.899814 ACTGAACTGATGCCCTCGTTA 59.100 47.619 0.00 0.00 0.00 3.18
4009 4635 2.093973 ACTGAACTGATGCCCTCGTTAG 60.094 50.000 0.00 0.00 0.00 2.34
4010 4636 1.291132 GAACTGATGCCCTCGTTAGC 58.709 55.000 0.00 0.00 0.00 3.09
4011 4637 0.905357 AACTGATGCCCTCGTTAGCT 59.095 50.000 0.00 0.00 0.00 3.32
4012 4638 0.176680 ACTGATGCCCTCGTTAGCTG 59.823 55.000 0.00 0.00 0.00 4.24
4013 4639 0.176680 CTGATGCCCTCGTTAGCTGT 59.823 55.000 0.00 0.00 0.00 4.40
4014 4640 0.613260 TGATGCCCTCGTTAGCTGTT 59.387 50.000 0.00 0.00 0.00 3.16
4015 4641 1.009829 GATGCCCTCGTTAGCTGTTG 58.990 55.000 0.00 0.00 0.00 3.33
4016 4642 0.392998 ATGCCCTCGTTAGCTGTTGG 60.393 55.000 0.00 0.00 0.00 3.77
4017 4643 1.745489 GCCCTCGTTAGCTGTTGGG 60.745 63.158 0.00 1.94 37.76 4.12
4018 4644 1.078426 CCCTCGTTAGCTGTTGGGG 60.078 63.158 0.00 0.00 0.00 4.96
4019 4645 1.078426 CCTCGTTAGCTGTTGGGGG 60.078 63.158 0.00 0.00 0.00 5.40
4020 4646 1.745489 CTCGTTAGCTGTTGGGGGC 60.745 63.158 0.00 0.00 0.00 5.80
4021 4647 2.185310 CTCGTTAGCTGTTGGGGGCT 62.185 60.000 0.00 0.00 41.92 5.19
4022 4648 2.040544 CGTTAGCTGTTGGGGGCTG 61.041 63.158 0.00 0.00 39.31 4.85
4023 4649 1.678970 GTTAGCTGTTGGGGGCTGG 60.679 63.158 0.00 0.00 39.31 4.85
4024 4650 1.850289 TTAGCTGTTGGGGGCTGGA 60.850 57.895 0.00 0.00 39.31 3.86
4025 4651 2.137177 TTAGCTGTTGGGGGCTGGAC 62.137 60.000 0.00 0.00 39.31 4.02
4026 4652 3.971702 GCTGTTGGGGGCTGGACT 61.972 66.667 0.00 0.00 0.00 3.85
4027 4653 2.352805 CTGTTGGGGGCTGGACTC 59.647 66.667 0.00 0.00 0.00 3.36
4028 4654 2.449518 TGTTGGGGGCTGGACTCA 60.450 61.111 0.00 0.00 0.00 3.41
4029 4655 2.034221 GTTGGGGGCTGGACTCAC 59.966 66.667 0.00 0.00 0.00 3.51
4030 4656 3.256960 TTGGGGGCTGGACTCACC 61.257 66.667 0.00 0.00 39.54 4.02
4032 4658 4.035102 GGGGGCTGGACTCACCAC 62.035 72.222 0.00 0.00 44.64 4.16
4033 4659 2.930562 GGGGCTGGACTCACCACT 60.931 66.667 0.00 0.00 44.64 4.00
4034 4660 2.529744 GGGGCTGGACTCACCACTT 61.530 63.158 0.00 0.00 44.64 3.16
4035 4661 1.198759 GGGGCTGGACTCACCACTTA 61.199 60.000 0.00 0.00 44.64 2.24
4036 4662 0.912486 GGGCTGGACTCACCACTTAT 59.088 55.000 0.00 0.00 44.64 1.73
4037 4663 1.134371 GGGCTGGACTCACCACTTATC 60.134 57.143 0.00 0.00 44.64 1.75
4038 4664 1.134371 GGCTGGACTCACCACTTATCC 60.134 57.143 0.00 0.00 44.64 2.59
4039 4665 1.555075 GCTGGACTCACCACTTATCCA 59.445 52.381 0.00 0.00 44.64 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
353 876 3.011517 GCCTCCTTCTCCCTGCCA 61.012 66.667 0.00 0.00 0.00 4.92
397 920 2.351641 CCATTTTGTACGCACACAGCAT 60.352 45.455 0.00 0.00 46.13 3.79
401 924 0.312416 GCCCATTTTGTACGCACACA 59.688 50.000 0.00 0.00 33.30 3.72
444 967 4.450082 AATTAAGGGCGACATGTTTTCC 57.550 40.909 0.00 1.87 0.00 3.13
473 996 7.074237 ACCATTGATTTCTTGAGGGTAGGATAT 59.926 37.037 0.00 0.00 0.00 1.63
500 1023 6.042208 GCTGAAGTAAGAGGGACCAGTATAAT 59.958 42.308 0.00 0.00 0.00 1.28
516 1048 4.581824 CGGTACCCTATACTGCTGAAGTAA 59.418 45.833 6.25 0.00 44.57 2.24
547 1079 7.922699 ATAGAACCACCTTTTATAGAGAGCT 57.077 36.000 0.00 0.00 0.00 4.09
556 1088 6.072563 GCGGTGTTTTATAGAACCACCTTTTA 60.073 38.462 17.55 0.00 32.93 1.52
557 1089 5.278610 GCGGTGTTTTATAGAACCACCTTTT 60.279 40.000 17.55 0.00 32.93 2.27
558 1090 4.216902 GCGGTGTTTTATAGAACCACCTTT 59.783 41.667 17.55 0.00 32.93 3.11
559 1091 3.754850 GCGGTGTTTTATAGAACCACCTT 59.245 43.478 17.55 0.00 32.93 3.50
560 1092 3.340928 GCGGTGTTTTATAGAACCACCT 58.659 45.455 17.55 0.00 32.93 4.00
561 1093 2.421073 GGCGGTGTTTTATAGAACCACC 59.579 50.000 13.27 13.27 32.69 4.61
562 1094 3.075884 TGGCGGTGTTTTATAGAACCAC 58.924 45.455 3.86 2.93 32.69 4.16
563 1095 3.420300 TGGCGGTGTTTTATAGAACCA 57.580 42.857 3.86 0.00 32.69 3.67
564 1096 4.976224 AATGGCGGTGTTTTATAGAACC 57.024 40.909 3.86 0.00 0.00 3.62
565 1097 5.106078 TGGAAATGGCGGTGTTTTATAGAAC 60.106 40.000 0.00 0.00 0.00 3.01
566 1098 5.010933 TGGAAATGGCGGTGTTTTATAGAA 58.989 37.500 0.00 0.00 0.00 2.10
567 1099 4.590918 TGGAAATGGCGGTGTTTTATAGA 58.409 39.130 0.00 0.00 0.00 1.98
568 1100 4.974368 TGGAAATGGCGGTGTTTTATAG 57.026 40.909 0.00 0.00 0.00 1.31
569 1101 4.381079 GCTTGGAAATGGCGGTGTTTTATA 60.381 41.667 0.00 0.00 0.00 0.98
570 1102 3.616317 GCTTGGAAATGGCGGTGTTTTAT 60.616 43.478 0.00 0.00 0.00 1.40
571 1103 2.288518 GCTTGGAAATGGCGGTGTTTTA 60.289 45.455 0.00 0.00 0.00 1.52
572 1104 1.540146 GCTTGGAAATGGCGGTGTTTT 60.540 47.619 0.00 0.00 0.00 2.43
573 1105 0.033366 GCTTGGAAATGGCGGTGTTT 59.967 50.000 0.00 0.00 0.00 2.83
574 1106 1.665442 GCTTGGAAATGGCGGTGTT 59.335 52.632 0.00 0.00 0.00 3.32
575 1107 2.625823 CGCTTGGAAATGGCGGTGT 61.626 57.895 0.00 0.00 44.32 4.16
576 1108 2.179018 CGCTTGGAAATGGCGGTG 59.821 61.111 0.00 0.00 44.32 4.94
580 1112 1.017387 CTCCTACGCTTGGAAATGGC 58.983 55.000 0.00 0.00 32.61 4.40
581 1113 2.691409 TCTCCTACGCTTGGAAATGG 57.309 50.000 0.00 0.00 32.61 3.16
582 1114 2.352960 GCTTCTCCTACGCTTGGAAATG 59.647 50.000 0.00 0.00 32.61 2.32
583 1115 2.027192 TGCTTCTCCTACGCTTGGAAAT 60.027 45.455 0.00 0.00 32.61 2.17
584 1116 1.346395 TGCTTCTCCTACGCTTGGAAA 59.654 47.619 0.00 0.00 32.61 3.13
585 1117 0.973632 TGCTTCTCCTACGCTTGGAA 59.026 50.000 0.00 0.00 32.61 3.53
586 1118 0.246635 GTGCTTCTCCTACGCTTGGA 59.753 55.000 0.00 0.00 0.00 3.53
587 1119 0.741221 GGTGCTTCTCCTACGCTTGG 60.741 60.000 0.00 0.00 0.00 3.61
588 1120 0.037326 TGGTGCTTCTCCTACGCTTG 60.037 55.000 0.00 0.00 0.00 4.01
589 1121 0.037232 GTGGTGCTTCTCCTACGCTT 60.037 55.000 0.00 0.00 0.00 4.68
590 1122 1.592223 GTGGTGCTTCTCCTACGCT 59.408 57.895 0.00 0.00 0.00 5.07
591 1123 1.805945 CGTGGTGCTTCTCCTACGC 60.806 63.158 0.00 0.00 0.00 4.42
592 1124 1.805945 GCGTGGTGCTTCTCCTACG 60.806 63.158 0.00 0.00 41.73 3.51
593 1125 1.448013 GGCGTGGTGCTTCTCCTAC 60.448 63.158 0.00 0.00 45.43 3.18
594 1126 1.888436 CTGGCGTGGTGCTTCTCCTA 61.888 60.000 0.00 0.00 45.43 2.94
595 1127 3.241530 TGGCGTGGTGCTTCTCCT 61.242 61.111 0.00 0.00 45.43 3.69
596 1128 2.167398 TACTGGCGTGGTGCTTCTCC 62.167 60.000 0.00 0.00 45.43 3.71
597 1129 0.737715 CTACTGGCGTGGTGCTTCTC 60.738 60.000 0.00 0.00 45.43 2.87
598 1130 1.293498 CTACTGGCGTGGTGCTTCT 59.707 57.895 0.00 0.00 45.43 2.85
599 1131 1.004918 ACTACTGGCGTGGTGCTTC 60.005 57.895 0.00 0.00 45.43 3.86
600 1132 1.004918 GACTACTGGCGTGGTGCTT 60.005 57.895 3.59 0.00 45.43 3.91
601 1133 2.657237 GACTACTGGCGTGGTGCT 59.343 61.111 3.59 0.00 45.43 4.40
602 1134 2.434359 GGACTACTGGCGTGGTGC 60.434 66.667 3.59 3.12 45.38 5.01
603 1135 1.215647 GAGGACTACTGGCGTGGTG 59.784 63.158 3.59 0.00 34.74 4.17
604 1136 1.982938 GGAGGACTACTGGCGTGGT 60.983 63.158 0.00 0.00 37.57 4.16
605 1137 1.258445 AAGGAGGACTACTGGCGTGG 61.258 60.000 0.00 0.00 0.00 4.94
606 1138 0.173708 GAAGGAGGACTACTGGCGTG 59.826 60.000 0.00 0.00 0.00 5.34
607 1139 0.971447 GGAAGGAGGACTACTGGCGT 60.971 60.000 0.00 0.00 0.00 5.68
608 1140 1.677637 GGGAAGGAGGACTACTGGCG 61.678 65.000 0.00 0.00 0.00 5.69
609 1141 0.617820 TGGGAAGGAGGACTACTGGC 60.618 60.000 0.00 0.00 0.00 4.85
610 1142 1.196012 GTGGGAAGGAGGACTACTGG 58.804 60.000 0.00 0.00 0.00 4.00
611 1143 2.239681 AGTGGGAAGGAGGACTACTG 57.760 55.000 0.00 0.00 0.00 2.74
612 1144 4.548669 GAATAGTGGGAAGGAGGACTACT 58.451 47.826 0.00 0.00 0.00 2.57
613 1145 3.318557 CGAATAGTGGGAAGGAGGACTAC 59.681 52.174 0.00 0.00 0.00 2.73
614 1146 3.053095 ACGAATAGTGGGAAGGAGGACTA 60.053 47.826 0.00 0.00 0.00 2.59
615 1147 2.292323 ACGAATAGTGGGAAGGAGGACT 60.292 50.000 0.00 0.00 0.00 3.85
616 1148 2.101082 GACGAATAGTGGGAAGGAGGAC 59.899 54.545 0.00 0.00 0.00 3.85
617 1149 2.024273 AGACGAATAGTGGGAAGGAGGA 60.024 50.000 0.00 0.00 0.00 3.71
696 1228 2.217038 TGTGGCACAGAGGGAGGAC 61.217 63.158 17.96 0.00 41.80 3.85
918 1483 2.244436 CTTGCACGCCGTGAGATTGG 62.244 60.000 23.33 0.17 35.23 3.16
919 1484 1.133253 CTTGCACGCCGTGAGATTG 59.867 57.895 23.33 1.62 35.23 2.67
920 1485 2.680913 GCTTGCACGCCGTGAGATT 61.681 57.895 23.33 0.00 35.23 2.40
921 1486 3.121030 GCTTGCACGCCGTGAGAT 61.121 61.111 23.33 0.00 35.23 2.75
922 1487 4.299547 AGCTTGCACGCCGTGAGA 62.300 61.111 23.33 7.13 35.23 3.27
923 1488 3.782244 GAGCTTGCACGCCGTGAG 61.782 66.667 23.33 11.63 35.23 3.51
1002 1579 2.115911 GTTGGACGTGGTGTTGGCA 61.116 57.895 0.00 0.00 0.00 4.92
1015 1593 4.612412 GGCGACGGTGGTGTTGGA 62.612 66.667 0.00 0.00 0.00 3.53
1092 1670 2.574006 AGCTCTGCCAGAAAACATCA 57.426 45.000 0.00 0.00 0.00 3.07
1244 1822 1.453015 GTGTCACCACTGTGGCCAA 60.453 57.895 26.20 9.39 46.74 4.52
1253 1831 3.632145 AGAAACAATGGAAGTGTCACCAC 59.368 43.478 0.00 0.00 44.85 4.16
1260 1841 5.666969 TGAACGTAGAAACAATGGAAGTG 57.333 39.130 0.00 0.00 38.30 3.16
1277 1858 0.934496 TTGCTTGGACGAGTTGAACG 59.066 50.000 0.00 0.00 0.00 3.95
1399 1980 3.955551 TCAATGGCATACTGGACGTACTA 59.044 43.478 0.00 0.00 0.00 1.82
1480 2061 0.037232 GAAGACCCCTCGAACCACAG 60.037 60.000 0.00 0.00 0.00 3.66
1497 2078 0.597568 CGGCTTGCCAATCTTGTGAA 59.402 50.000 12.45 0.00 0.00 3.18
1659 2240 0.459585 TTCTTACGCATCCAGCCGAC 60.460 55.000 0.00 0.00 41.38 4.79
1673 2254 5.027460 TGCAGTAGAGTGGGGTATTTCTTA 58.973 41.667 0.00 0.00 0.00 2.10
1683 2264 0.035317 TGCTGTTGCAGTAGAGTGGG 59.965 55.000 3.71 0.00 45.31 4.61
1871 2455 1.238439 CTTGTCGTGCCAAATGGAGT 58.762 50.000 2.98 0.00 37.39 3.85
1893 2477 6.943718 TGTTACCTTATTCCCGAAAATTGAGT 59.056 34.615 0.00 0.00 0.00 3.41
1900 2484 5.231702 ACACTGTTACCTTATTCCCGAAA 57.768 39.130 0.00 0.00 0.00 3.46
2167 2751 3.430236 CCCTTGAACACTGAACCAAAACC 60.430 47.826 0.00 0.00 0.00 3.27
2252 2836 1.030457 CATCTCAGCCCTGAATTGCC 58.970 55.000 0.00 0.00 39.39 4.52
2269 2853 1.251527 ACGACTCCGGTTGAGCTCAT 61.252 55.000 19.04 0.00 45.61 2.90
2280 2864 1.517257 GACATGCTGGACGACTCCG 60.517 63.158 0.00 0.00 39.88 4.63
2346 2930 3.057734 GGGCATATACTCGTACACAAGC 58.942 50.000 0.00 0.00 0.00 4.01
2400 2984 2.027007 CCAATCCAACACCATGCCATTT 60.027 45.455 0.00 0.00 0.00 2.32
2422 3006 3.763897 AGGGTTATTTTGTGTCTGATGGC 59.236 43.478 0.00 0.00 0.00 4.40
2424 3008 5.713025 CCAAGGGTTATTTTGTGTCTGATG 58.287 41.667 0.00 0.00 0.00 3.07
2426 3010 3.572255 GCCAAGGGTTATTTTGTGTCTGA 59.428 43.478 0.00 0.00 0.00 3.27
2430 3014 2.312390 ACGCCAAGGGTTATTTTGTGT 58.688 42.857 0.00 0.00 0.00 3.72
2431 3015 3.056304 CAACGCCAAGGGTTATTTTGTG 58.944 45.455 0.00 0.00 36.59 3.33
2440 3024 1.296715 CTCTAGCAACGCCAAGGGT 59.703 57.895 0.00 0.00 0.00 4.34
2489 3073 7.536622 GCTTGATATCAAAGTGTATAATGCAGC 59.463 37.037 18.47 9.55 35.15 5.25
2504 3088 7.129457 AGTATGTTCTCTGGCTTGATATCAA 57.871 36.000 17.07 17.07 0.00 2.57
2578 3162 3.895041 TGACTGAAATCCCTTCCCAAAAC 59.105 43.478 0.00 0.00 32.53 2.43
2736 3320 1.664321 GGGAGGATGCTTGCTTGCTG 61.664 60.000 7.20 0.00 0.00 4.41
2746 3330 1.105759 GCACCATCTTGGGAGGATGC 61.106 60.000 0.00 0.00 43.37 3.91
2789 3373 3.527533 TCAACAAGACTACGTGCAACTT 58.472 40.909 0.00 0.00 31.75 2.66
2799 3383 5.045942 TGCAATGTCCCTATCAACAAGACTA 60.046 40.000 0.00 0.00 0.00 2.59
2812 3396 0.773644 ACCAGACTTGCAATGTCCCT 59.226 50.000 19.11 5.61 41.53 4.20
2814 3398 0.883833 CCACCAGACTTGCAATGTCC 59.116 55.000 19.11 3.35 41.53 4.02
2853 3437 2.259917 TCAAGCTCCTCCAGATTCACA 58.740 47.619 0.00 0.00 0.00 3.58
2869 3453 5.401550 TGTGACTTTGCAAACTCTTTCAAG 58.598 37.500 8.05 0.00 0.00 3.02
2890 3474 6.885918 TCATCATCTTGAATACACCAACATGT 59.114 34.615 0.00 0.00 36.56 3.21
2928 3512 0.737715 GCACCACCTCAGTCATCGTC 60.738 60.000 0.00 0.00 0.00 4.20
2931 3515 0.322975 ACTGCACCACCTCAGTCATC 59.677 55.000 0.00 0.00 39.11 2.92
2936 3520 1.517242 GAGAAACTGCACCACCTCAG 58.483 55.000 0.00 0.00 36.45 3.35
2958 3542 4.313277 TGTCTCAACTTCAGACAGACAG 57.687 45.455 0.00 0.00 44.33 3.51
2988 3572 4.459337 GCAATAGCTTGAAGTAACCTTGGT 59.541 41.667 0.00 0.00 37.91 3.67
3026 3610 8.207545 CCAAGCTTAAGGACTACATTATCTTCT 58.792 37.037 0.00 0.00 0.00 2.85
3042 3626 8.286191 AGATTTAACCAGAATCCAAGCTTAAG 57.714 34.615 0.00 0.00 34.74 1.85
3043 3627 7.339466 GGAGATTTAACCAGAATCCAAGCTTAA 59.661 37.037 0.00 0.00 34.74 1.85
3045 3629 5.654209 GGAGATTTAACCAGAATCCAAGCTT 59.346 40.000 0.00 0.00 34.74 3.74
3048 3632 5.760131 AGGGAGATTTAACCAGAATCCAAG 58.240 41.667 0.00 0.00 34.74 3.61
3091 3678 7.158697 ACCAAATTACAAGGGAAAAGCAATAC 58.841 34.615 0.00 0.00 0.00 1.89
3125 3730 5.762825 AGCATAGTGGTTTTCATAGCATG 57.237 39.130 0.00 0.00 0.00 4.06
3126 3731 7.941238 AGATTAGCATAGTGGTTTTCATAGCAT 59.059 33.333 0.00 0.00 0.00 3.79
3127 3732 7.282585 AGATTAGCATAGTGGTTTTCATAGCA 58.717 34.615 0.00 0.00 0.00 3.49
3131 3736 9.905713 TCTTAAGATTAGCATAGTGGTTTTCAT 57.094 29.630 0.00 0.00 0.00 2.57
3132 3737 9.905713 ATCTTAAGATTAGCATAGTGGTTTTCA 57.094 29.630 12.37 0.00 0.00 2.69
3150 3759 5.745227 CCAGGCCTTAACTGAATCTTAAGA 58.255 41.667 0.00 7.82 38.20 2.10
3187 3796 2.285488 GCAGCGTAACTAATTCTGCCTC 59.715 50.000 0.00 0.00 42.98 4.70
3191 3800 4.864916 ATGTGCAGCGTAACTAATTCTG 57.135 40.909 0.00 0.00 0.00 3.02
3202 3812 0.238289 GTGTGCTTAATGTGCAGCGT 59.762 50.000 0.00 0.00 41.41 5.07
3204 3814 1.536766 TGAGTGTGCTTAATGTGCAGC 59.463 47.619 0.00 0.00 41.41 5.25
3216 3826 5.228635 CGAAAATATGAAAGCATGAGTGTGC 59.771 40.000 0.00 0.00 45.38 4.57
3218 3828 5.415701 ACCGAAAATATGAAAGCATGAGTGT 59.584 36.000 0.00 0.00 35.94 3.55
3220 3830 5.647658 TGACCGAAAATATGAAAGCATGAGT 59.352 36.000 0.00 0.00 35.94 3.41
3231 3841 7.195646 ACATAGTTGCATTGACCGAAAATATG 58.804 34.615 0.00 0.00 35.82 1.78
3234 3844 5.182950 TGACATAGTTGCATTGACCGAAAAT 59.817 36.000 0.00 0.00 0.00 1.82
3244 3854 4.707105 TCCGATCATGACATAGTTGCATT 58.293 39.130 0.00 0.00 0.00 3.56
3245 3855 4.202295 ACTCCGATCATGACATAGTTGCAT 60.202 41.667 0.00 0.00 0.00 3.96
3277 3899 2.422597 CGAGTCCCAAATGTGCTAACA 58.577 47.619 0.00 0.00 41.58 2.41
3286 3908 1.349688 TGTGCTAACCGAGTCCCAAAT 59.650 47.619 0.00 0.00 0.00 2.32
3293 3915 3.555168 CCTCTTCTTTGTGCTAACCGAGT 60.555 47.826 0.00 0.00 0.00 4.18
3305 3927 3.424703 TCTGCAATTCCCCTCTTCTTTG 58.575 45.455 0.00 0.00 0.00 2.77
3307 3929 5.659849 ATATCTGCAATTCCCCTCTTCTT 57.340 39.130 0.00 0.00 0.00 2.52
3391 4016 3.006430 GGCTCGGAATTTGGGAAGAAAAA 59.994 43.478 0.00 0.00 0.00 1.94
3392 4017 2.560981 GGCTCGGAATTTGGGAAGAAAA 59.439 45.455 0.00 0.00 0.00 2.29
3393 4018 2.167662 GGCTCGGAATTTGGGAAGAAA 58.832 47.619 0.00 0.00 0.00 2.52
3394 4019 1.615919 GGGCTCGGAATTTGGGAAGAA 60.616 52.381 0.00 0.00 0.00 2.52
3395 4020 0.034477 GGGCTCGGAATTTGGGAAGA 60.034 55.000 0.00 0.00 0.00 2.87
3396 4021 0.034089 AGGGCTCGGAATTTGGGAAG 60.034 55.000 0.00 0.00 0.00 3.46
3397 4022 1.291109 TAGGGCTCGGAATTTGGGAA 58.709 50.000 0.00 0.00 0.00 3.97
3402 4027 3.699538 GTCCATTTTAGGGCTCGGAATTT 59.300 43.478 0.00 0.00 0.00 1.82
3407 4032 2.122783 TTGTCCATTTTAGGGCTCGG 57.877 50.000 0.00 0.00 33.35 4.63
3422 4047 2.479560 GGCCAAGCATTTCGGTATTGTC 60.480 50.000 0.00 0.00 0.00 3.18
3424 4049 1.750778 AGGCCAAGCATTTCGGTATTG 59.249 47.619 5.01 0.00 0.00 1.90
3428 4053 0.962356 CTGAGGCCAAGCATTTCGGT 60.962 55.000 5.01 0.00 0.00 4.69
3446 4071 2.711547 GGGTAATCAAGGTAGGCATCCT 59.288 50.000 0.00 0.00 37.71 3.24
3475 4100 4.227134 CCCGACGGGCCAGAGATG 62.227 72.222 22.37 0.00 35.35 2.90
3515 4141 4.530857 CATGCCGTCCGGGGAGAC 62.531 72.222 7.97 0.00 40.71 3.36
3522 4148 3.864686 CTTTCCGCATGCCGTCCG 61.865 66.667 13.15 0.00 34.38 4.79
3523 4149 2.038269 TTCTTTCCGCATGCCGTCC 61.038 57.895 13.15 0.00 34.38 4.79
3524 4150 1.134694 GTTCTTTCCGCATGCCGTC 59.865 57.895 13.15 0.00 34.38 4.79
3525 4151 1.169661 TTGTTCTTTCCGCATGCCGT 61.170 50.000 13.15 0.00 34.38 5.68
3526 4152 0.039617 TTTGTTCTTTCCGCATGCCG 60.040 50.000 13.15 5.80 0.00 5.69
3527 4153 1.669795 CCTTTGTTCTTTCCGCATGCC 60.670 52.381 13.15 0.00 0.00 4.40
3528 4154 1.701704 CCTTTGTTCTTTCCGCATGC 58.298 50.000 7.91 7.91 0.00 4.06
3529 4155 1.701704 GCCTTTGTTCTTTCCGCATG 58.298 50.000 0.00 0.00 0.00 4.06
3530 4156 0.240945 CGCCTTTGTTCTTTCCGCAT 59.759 50.000 0.00 0.00 0.00 4.73
3531 4157 1.652012 CGCCTTTGTTCTTTCCGCA 59.348 52.632 0.00 0.00 0.00 5.69
3532 4158 1.729484 GCGCCTTTGTTCTTTCCGC 60.729 57.895 0.00 0.00 0.00 5.54
3533 4159 0.385974 CAGCGCCTTTGTTCTTTCCG 60.386 55.000 2.29 0.00 0.00 4.30
3534 4160 0.039165 CCAGCGCCTTTGTTCTTTCC 60.039 55.000 2.29 0.00 0.00 3.13
3535 4161 0.951558 TCCAGCGCCTTTGTTCTTTC 59.048 50.000 2.29 0.00 0.00 2.62
3536 4162 0.668535 GTCCAGCGCCTTTGTTCTTT 59.331 50.000 2.29 0.00 0.00 2.52
3537 4163 1.172812 GGTCCAGCGCCTTTGTTCTT 61.173 55.000 2.29 0.00 0.00 2.52
3538 4164 1.600916 GGTCCAGCGCCTTTGTTCT 60.601 57.895 2.29 0.00 0.00 3.01
3539 4165 1.856265 CTGGTCCAGCGCCTTTGTTC 61.856 60.000 5.79 0.00 0.00 3.18
3540 4166 1.898574 CTGGTCCAGCGCCTTTGTT 60.899 57.895 5.79 0.00 0.00 2.83
3541 4167 2.281761 CTGGTCCAGCGCCTTTGT 60.282 61.111 5.79 0.00 0.00 2.83
3550 4176 3.716006 CGCAACGTGCTGGTCCAG 61.716 66.667 15.15 15.15 42.25 3.86
3587 4213 0.527817 CATTAGGAGGCGTCGGTGAC 60.528 60.000 0.00 0.00 0.00 3.67
3588 4214 0.968901 ACATTAGGAGGCGTCGGTGA 60.969 55.000 0.00 0.00 0.00 4.02
3589 4215 0.527817 GACATTAGGAGGCGTCGGTG 60.528 60.000 0.00 0.00 0.00 4.94
3590 4216 1.814527 GACATTAGGAGGCGTCGGT 59.185 57.895 0.00 0.00 0.00 4.69
3591 4217 1.299165 CGACATTAGGAGGCGTCGG 60.299 63.158 0.00 0.00 45.60 4.79
3592 4218 4.303853 CGACATTAGGAGGCGTCG 57.696 61.111 0.00 0.00 44.34 5.12
3593 4219 1.591863 GGCGACATTAGGAGGCGTC 60.592 63.158 0.00 0.00 0.00 5.19
3594 4220 2.499685 GGCGACATTAGGAGGCGT 59.500 61.111 0.00 0.00 0.00 5.68
3595 4221 2.280186 GGGCGACATTAGGAGGCG 60.280 66.667 0.00 0.00 0.00 5.52
3596 4222 2.111251 GGGGCGACATTAGGAGGC 59.889 66.667 0.00 0.00 0.00 4.70
3597 4223 2.421739 CGGGGCGACATTAGGAGG 59.578 66.667 0.00 0.00 0.00 4.30
3598 4224 2.421739 CCGGGGCGACATTAGGAG 59.578 66.667 0.00 0.00 0.00 3.69
3599 4225 3.857038 GCCGGGGCGACATTAGGA 61.857 66.667 2.18 0.00 0.00 2.94
3600 4226 4.169696 TGCCGGGGCGACATTAGG 62.170 66.667 2.18 0.00 45.51 2.69
3601 4227 2.895372 GTGCCGGGGCGACATTAG 60.895 66.667 2.18 0.00 45.51 1.73
3602 4228 4.823419 CGTGCCGGGGCGACATTA 62.823 66.667 2.18 0.00 45.51 1.90
3616 4242 4.530857 GGGAGATGGTCGCCCGTG 62.531 72.222 2.97 0.00 46.40 4.94
3621 4247 4.570663 CGACGGGGAGATGGTCGC 62.571 72.222 0.00 0.00 45.55 5.19
3623 4249 1.141234 GAACGACGGGGAGATGGTC 59.859 63.158 0.00 0.00 0.00 4.02
3624 4250 2.356780 GGAACGACGGGGAGATGGT 61.357 63.158 0.00 0.00 0.00 3.55
3625 4251 2.017559 GAGGAACGACGGGGAGATGG 62.018 65.000 0.00 0.00 0.00 3.51
3626 4252 1.437986 GAGGAACGACGGGGAGATG 59.562 63.158 0.00 0.00 0.00 2.90
3627 4253 1.757340 GGAGGAACGACGGGGAGAT 60.757 63.158 0.00 0.00 0.00 2.75
3628 4254 2.362120 GGAGGAACGACGGGGAGA 60.362 66.667 0.00 0.00 0.00 3.71
3629 4255 3.823330 CGGAGGAACGACGGGGAG 61.823 72.222 0.00 0.00 35.47 4.30
3635 4261 0.735287 GTACAAGGCGGAGGAACGAC 60.735 60.000 0.00 0.00 43.75 4.34
3636 4262 1.588082 GTACAAGGCGGAGGAACGA 59.412 57.895 0.00 0.00 35.47 3.85
3637 4263 1.447314 GGTACAAGGCGGAGGAACG 60.447 63.158 0.00 0.00 0.00 3.95
3638 4264 0.672711 GTGGTACAAGGCGGAGGAAC 60.673 60.000 0.00 0.00 44.16 3.62
3639 4265 1.675219 GTGGTACAAGGCGGAGGAA 59.325 57.895 0.00 0.00 44.16 3.36
3640 4266 2.642254 CGTGGTACAAGGCGGAGGA 61.642 63.158 0.00 0.00 44.16 3.71
3641 4267 2.125673 CGTGGTACAAGGCGGAGG 60.126 66.667 0.00 0.00 44.16 4.30
3642 4268 2.813908 GCGTGGTACAAGGCGGAG 60.814 66.667 0.00 0.00 44.16 4.63
3692 4318 1.657556 CCAGAGACCTAGCTAGCGC 59.342 63.158 15.74 0.00 0.00 5.92
3693 4319 1.657556 GCCAGAGACCTAGCTAGCG 59.342 63.158 15.74 11.00 0.00 4.26
3694 4320 1.801309 CGGCCAGAGACCTAGCTAGC 61.801 65.000 15.74 6.62 0.00 3.42
3695 4321 0.179015 TCGGCCAGAGACCTAGCTAG 60.179 60.000 14.20 14.20 0.00 3.42
3696 4322 1.920532 TCGGCCAGAGACCTAGCTA 59.079 57.895 2.24 0.00 0.00 3.32
3697 4323 2.684104 TCGGCCAGAGACCTAGCT 59.316 61.111 2.24 0.00 0.00 3.32
3729 4355 2.048316 CATTGTGGCCCCGTTTGC 60.048 61.111 0.00 0.00 0.00 3.68
3730 4356 2.048316 GCATTGTGGCCCCGTTTG 60.048 61.111 0.00 0.00 0.00 2.93
3738 4364 4.517815 CCATGGCGGCATTGTGGC 62.518 66.667 23.47 0.00 39.85 5.01
3739 4365 2.349672 TTCCATGGCGGCATTGTGG 61.350 57.895 23.47 21.96 33.14 4.17
3740 4366 1.153784 GTTCCATGGCGGCATTGTG 60.154 57.895 23.47 13.09 33.14 3.33
3741 4367 2.350458 GGTTCCATGGCGGCATTGT 61.350 57.895 23.47 0.00 33.14 2.71
3742 4368 2.495866 GGTTCCATGGCGGCATTG 59.504 61.111 23.47 19.39 33.14 2.82
3743 4369 2.759560 GGGTTCCATGGCGGCATT 60.760 61.111 23.47 4.81 33.14 3.56
3744 4370 4.059304 TGGGTTCCATGGCGGCAT 62.059 61.111 20.18 20.18 33.14 4.40
3745 4371 4.738998 CTGGGTTCCATGGCGGCA 62.739 66.667 16.34 16.34 30.82 5.69
3747 4373 4.431131 AGCTGGGTTCCATGGCGG 62.431 66.667 6.96 0.00 31.22 6.13
3748 4374 3.136123 CAGCTGGGTTCCATGGCG 61.136 66.667 6.96 0.00 31.22 5.69
3749 4375 2.578586 ATCCAGCTGGGTTCCATGGC 62.579 60.000 32.23 0.00 34.59 4.40
3750 4376 0.754217 CATCCAGCTGGGTTCCATGG 60.754 60.000 32.23 8.76 35.58 3.66
3751 4377 0.754217 CCATCCAGCTGGGTTCCATG 60.754 60.000 32.23 25.08 38.11 3.66
3752 4378 1.217057 ACCATCCAGCTGGGTTCCAT 61.217 55.000 32.23 15.38 40.85 3.41
3753 4379 1.852157 ACCATCCAGCTGGGTTCCA 60.852 57.895 32.23 13.54 40.85 3.53
3754 4380 1.077429 GACCATCCAGCTGGGTTCC 60.077 63.158 32.23 12.78 40.85 3.62
3755 4381 1.450312 CGACCATCCAGCTGGGTTC 60.450 63.158 32.23 19.52 40.85 3.62
3756 4382 1.779061 AACGACCATCCAGCTGGGTT 61.779 55.000 32.23 22.57 40.85 4.11
3757 4383 0.907704 TAACGACCATCCAGCTGGGT 60.908 55.000 32.23 24.65 40.85 4.51
3758 4384 0.179073 CTAACGACCATCCAGCTGGG 60.179 60.000 32.23 18.81 40.85 4.45
3759 4385 0.811616 GCTAACGACCATCCAGCTGG 60.812 60.000 27.87 27.87 42.35 4.85
3760 4386 0.811616 GGCTAACGACCATCCAGCTG 60.812 60.000 6.78 6.78 32.78 4.24
3761 4387 1.264749 TGGCTAACGACCATCCAGCT 61.265 55.000 0.00 0.00 32.78 4.24
3762 4388 0.179045 ATGGCTAACGACCATCCAGC 60.179 55.000 0.00 0.00 44.85 4.85
3771 4397 0.899720 AAAGGGTCGATGGCTAACGA 59.100 50.000 0.00 0.00 36.18 3.85
3772 4398 1.664151 GAAAAGGGTCGATGGCTAACG 59.336 52.381 0.00 0.00 0.00 3.18
3773 4399 2.014857 GGAAAAGGGTCGATGGCTAAC 58.985 52.381 0.00 0.00 0.00 2.34
3774 4400 1.406341 CGGAAAAGGGTCGATGGCTAA 60.406 52.381 0.00 0.00 0.00 3.09
3775 4401 0.177141 CGGAAAAGGGTCGATGGCTA 59.823 55.000 0.00 0.00 0.00 3.93
3776 4402 1.078426 CGGAAAAGGGTCGATGGCT 60.078 57.895 0.00 0.00 0.00 4.75
3777 4403 2.112815 CCGGAAAAGGGTCGATGGC 61.113 63.158 0.00 0.00 0.00 4.40
3778 4404 1.024579 CACCGGAAAAGGGTCGATGG 61.025 60.000 9.46 0.00 34.97 3.51
3779 4405 1.024579 CCACCGGAAAAGGGTCGATG 61.025 60.000 9.46 0.00 34.97 3.84
3780 4406 1.298667 CCACCGGAAAAGGGTCGAT 59.701 57.895 9.46 0.00 34.97 3.59
3781 4407 2.142104 ACCACCGGAAAAGGGTCGA 61.142 57.895 9.46 0.00 34.97 4.20
3782 4408 1.964373 CACCACCGGAAAAGGGTCG 60.964 63.158 9.46 0.00 34.97 4.79
3783 4409 2.265904 GCACCACCGGAAAAGGGTC 61.266 63.158 9.46 0.00 34.97 4.46
3784 4410 2.203437 GCACCACCGGAAAAGGGT 60.203 61.111 9.46 4.42 38.65 4.34
3785 4411 3.361977 CGCACCACCGGAAAAGGG 61.362 66.667 9.46 3.70 35.02 3.95
3793 4419 2.867472 GATTTCACCGCACCACCG 59.133 61.111 0.00 0.00 0.00 4.94
3794 4420 2.686816 CCGATTTCACCGCACCACC 61.687 63.158 0.00 0.00 0.00 4.61
3795 4421 2.867472 CCGATTTCACCGCACCAC 59.133 61.111 0.00 0.00 0.00 4.16
3796 4422 3.053291 GCCGATTTCACCGCACCA 61.053 61.111 0.00 0.00 0.00 4.17
3797 4423 4.160635 CGCCGATTTCACCGCACC 62.161 66.667 0.00 0.00 0.00 5.01
3798 4424 4.811761 GCGCCGATTTCACCGCAC 62.812 66.667 0.00 0.00 45.21 5.34
3800 4426 3.876198 ATGCGCCGATTTCACCGC 61.876 61.111 4.18 0.00 45.99 5.68
3801 4427 2.023181 CATGCGCCGATTTCACCG 59.977 61.111 4.18 0.00 0.00 4.94
3802 4428 2.408835 CCATGCGCCGATTTCACC 59.591 61.111 4.18 0.00 0.00 4.02
3803 4429 2.278142 GCCATGCGCCGATTTCAC 60.278 61.111 4.18 0.00 0.00 3.18
3833 4459 1.288752 GGAACAACATTGCCGGTGG 59.711 57.895 1.90 0.00 0.00 4.61
3834 4460 0.318614 GTGGAACAACATTGCCGGTG 60.319 55.000 1.90 0.00 44.16 4.94
3835 4461 2.037871 GTGGAACAACATTGCCGGT 58.962 52.632 1.90 0.00 44.16 5.28
3836 4462 4.963815 GTGGAACAACATTGCCGG 57.036 55.556 0.00 0.00 44.16 6.13
3845 4471 1.152567 CAAGGCCCTGGTGGAACAA 60.153 57.895 0.00 0.00 44.16 2.83
3846 4472 2.520458 CAAGGCCCTGGTGGAACA 59.480 61.111 0.00 0.00 39.98 3.18
3847 4473 2.283173 CCAAGGCCCTGGTGGAAC 60.283 66.667 12.76 0.00 34.05 3.62
3848 4474 3.589542 CCCAAGGCCCTGGTGGAA 61.590 66.667 19.39 0.00 34.33 3.53
3859 4485 2.107204 ACATGAGCTATAAGCCCCAAGG 59.893 50.000 0.00 0.00 43.77 3.61
3860 4486 3.144506 CACATGAGCTATAAGCCCCAAG 58.855 50.000 0.00 0.00 43.77 3.61
3861 4487 2.749466 GCACATGAGCTATAAGCCCCAA 60.749 50.000 7.97 0.00 43.77 4.12
3862 4488 1.202806 GCACATGAGCTATAAGCCCCA 60.203 52.381 7.97 0.00 43.77 4.96
3863 4489 1.528129 GCACATGAGCTATAAGCCCC 58.472 55.000 7.97 0.00 43.77 5.80
3864 4490 1.151668 CGCACATGAGCTATAAGCCC 58.848 55.000 13.36 0.00 43.77 5.19
3865 4491 1.795286 GTCGCACATGAGCTATAAGCC 59.205 52.381 13.36 0.00 43.77 4.35
3866 4492 2.219674 GTGTCGCACATGAGCTATAAGC 59.780 50.000 13.36 0.00 36.48 3.09
3867 4493 3.447742 TGTGTCGCACATGAGCTATAAG 58.552 45.455 13.36 0.00 39.62 1.73
3868 4494 3.518634 TGTGTCGCACATGAGCTATAA 57.481 42.857 13.36 0.00 39.62 0.98
3879 4505 3.889196 TTCACCTTAAATGTGTCGCAC 57.111 42.857 3.44 3.44 35.25 5.34
3880 4506 4.320861 CCAATTCACCTTAAATGTGTCGCA 60.321 41.667 5.09 0.00 35.25 5.10
3881 4507 4.165779 CCAATTCACCTTAAATGTGTCGC 58.834 43.478 5.09 0.00 35.25 5.19
3882 4508 4.165779 GCCAATTCACCTTAAATGTGTCG 58.834 43.478 5.09 0.00 35.25 4.35
3883 4509 5.132897 TGCCAATTCACCTTAAATGTGTC 57.867 39.130 5.09 0.00 35.25 3.67
3884 4510 5.304101 TCTTGCCAATTCACCTTAAATGTGT 59.696 36.000 5.09 0.00 35.25 3.72
3885 4511 5.782047 TCTTGCCAATTCACCTTAAATGTG 58.218 37.500 0.00 0.00 35.01 3.21
3886 4512 5.539955 ACTCTTGCCAATTCACCTTAAATGT 59.460 36.000 0.00 0.00 0.00 2.71
3887 4513 5.865552 CACTCTTGCCAATTCACCTTAAATG 59.134 40.000 0.00 0.00 0.00 2.32
3888 4514 5.567423 GCACTCTTGCCAATTCACCTTAAAT 60.567 40.000 0.00 0.00 43.66 1.40
3889 4515 4.261994 GCACTCTTGCCAATTCACCTTAAA 60.262 41.667 0.00 0.00 43.66 1.52
3890 4516 3.255642 GCACTCTTGCCAATTCACCTTAA 59.744 43.478 0.00 0.00 43.66 1.85
3891 4517 2.819608 GCACTCTTGCCAATTCACCTTA 59.180 45.455 0.00 0.00 43.66 2.69
3892 4518 1.615392 GCACTCTTGCCAATTCACCTT 59.385 47.619 0.00 0.00 43.66 3.50
3893 4519 1.251251 GCACTCTTGCCAATTCACCT 58.749 50.000 0.00 0.00 43.66 4.00
3894 4520 3.800628 GCACTCTTGCCAATTCACC 57.199 52.632 0.00 0.00 43.66 4.02
3903 4529 0.383124 GAACAACGTCGCACTCTTGC 60.383 55.000 0.00 0.00 46.21 4.01
3904 4530 0.927537 TGAACAACGTCGCACTCTTG 59.072 50.000 0.00 0.00 0.00 3.02
3905 4531 1.593006 CTTGAACAACGTCGCACTCTT 59.407 47.619 0.00 0.00 0.00 2.85
3906 4532 1.209128 CTTGAACAACGTCGCACTCT 58.791 50.000 0.00 0.00 0.00 3.24
3907 4533 0.383124 GCTTGAACAACGTCGCACTC 60.383 55.000 0.00 0.00 0.00 3.51
3908 4534 1.641677 GCTTGAACAACGTCGCACT 59.358 52.632 0.00 0.00 0.00 4.40
3909 4535 1.717728 CGCTTGAACAACGTCGCAC 60.718 57.895 0.00 0.00 0.00 5.34
3910 4536 1.422179 TTCGCTTGAACAACGTCGCA 61.422 50.000 0.00 0.00 0.00 5.10
3911 4537 0.110823 ATTCGCTTGAACAACGTCGC 60.111 50.000 0.00 0.00 33.63 5.19
3912 4538 1.580439 CATTCGCTTGAACAACGTCG 58.420 50.000 0.00 0.00 33.63 5.12
3913 4539 1.950472 CCATTCGCTTGAACAACGTC 58.050 50.000 0.00 0.00 33.63 4.34
3914 4540 0.040425 GCCATTCGCTTGAACAACGT 60.040 50.000 0.00 0.00 33.63 3.99
3915 4541 2.712077 GCCATTCGCTTGAACAACG 58.288 52.632 0.00 0.00 33.63 4.10
3925 4551 4.465512 CGCACCACAGCCATTCGC 62.466 66.667 0.00 0.00 37.98 4.70
3926 4552 2.741985 TCGCACCACAGCCATTCG 60.742 61.111 0.00 0.00 0.00 3.34
3927 4553 1.514678 TTGTCGCACCACAGCCATTC 61.515 55.000 0.00 0.00 0.00 2.67
3928 4554 0.895100 ATTGTCGCACCACAGCCATT 60.895 50.000 0.00 0.00 0.00 3.16
3929 4555 0.895100 AATTGTCGCACCACAGCCAT 60.895 50.000 0.00 0.00 0.00 4.40
3930 4556 1.106351 AAATTGTCGCACCACAGCCA 61.106 50.000 0.00 0.00 0.00 4.75
3931 4557 0.031994 AAAATTGTCGCACCACAGCC 59.968 50.000 0.00 0.00 0.00 4.85
3932 4558 1.130955 CAAAATTGTCGCACCACAGC 58.869 50.000 0.00 0.00 0.00 4.40
3933 4559 2.653890 CTCAAAATTGTCGCACCACAG 58.346 47.619 0.00 0.00 0.00 3.66
3934 4560 1.268999 GCTCAAAATTGTCGCACCACA 60.269 47.619 0.00 0.00 0.00 4.17
3935 4561 1.268999 TGCTCAAAATTGTCGCACCAC 60.269 47.619 8.15 0.00 33.40 4.16
3936 4562 1.001487 CTGCTCAAAATTGTCGCACCA 60.001 47.619 8.15 0.00 34.19 4.17
3937 4563 1.666888 CCTGCTCAAAATTGTCGCACC 60.667 52.381 8.15 0.00 34.19 5.01
3938 4564 1.001378 ACCTGCTCAAAATTGTCGCAC 60.001 47.619 8.15 0.00 34.19 5.34
3939 4565 1.317613 ACCTGCTCAAAATTGTCGCA 58.682 45.000 10.62 10.62 35.59 5.10
3940 4566 3.552604 TTACCTGCTCAAAATTGTCGC 57.447 42.857 0.00 0.00 0.00 5.19
3941 4567 5.739161 GCTATTTACCTGCTCAAAATTGTCG 59.261 40.000 0.00 0.00 0.00 4.35
3942 4568 6.036470 GGCTATTTACCTGCTCAAAATTGTC 58.964 40.000 0.00 0.00 0.00 3.18
3943 4569 5.105351 GGGCTATTTACCTGCTCAAAATTGT 60.105 40.000 0.00 0.00 0.00 2.71
3944 4570 5.105392 TGGGCTATTTACCTGCTCAAAATTG 60.105 40.000 0.00 0.00 33.92 2.32
3945 4571 5.022787 TGGGCTATTTACCTGCTCAAAATT 58.977 37.500 0.00 0.00 33.92 1.82
3946 4572 4.402474 GTGGGCTATTTACCTGCTCAAAAT 59.598 41.667 0.00 0.00 39.03 1.82
3947 4573 3.761752 GTGGGCTATTTACCTGCTCAAAA 59.238 43.478 0.00 0.00 39.03 2.44
3948 4574 3.352648 GTGGGCTATTTACCTGCTCAAA 58.647 45.455 0.00 0.00 39.03 2.69
3949 4575 2.679639 CGTGGGCTATTTACCTGCTCAA 60.680 50.000 0.00 0.00 39.03 3.02
3950 4576 1.134521 CGTGGGCTATTTACCTGCTCA 60.135 52.381 0.00 0.00 34.51 4.26
3951 4577 1.583054 CGTGGGCTATTTACCTGCTC 58.417 55.000 0.00 0.00 0.00 4.26
3952 4578 0.463833 GCGTGGGCTATTTACCTGCT 60.464 55.000 0.00 0.00 35.83 4.24
3953 4579 0.746563 TGCGTGGGCTATTTACCTGC 60.747 55.000 0.00 0.00 40.82 4.85
3954 4580 1.014352 GTGCGTGGGCTATTTACCTG 58.986 55.000 0.00 0.00 40.82 4.00
3955 4581 0.461339 CGTGCGTGGGCTATTTACCT 60.461 55.000 0.00 0.00 40.82 3.08
3956 4582 0.460635 TCGTGCGTGGGCTATTTACC 60.461 55.000 0.00 0.00 40.82 2.85
3957 4583 0.648958 GTCGTGCGTGGGCTATTTAC 59.351 55.000 0.00 0.00 40.82 2.01
3958 4584 0.246910 TGTCGTGCGTGGGCTATTTA 59.753 50.000 0.00 0.00 40.82 1.40
3959 4585 0.392461 ATGTCGTGCGTGGGCTATTT 60.392 50.000 0.00 0.00 40.82 1.40
3960 4586 1.089481 CATGTCGTGCGTGGGCTATT 61.089 55.000 0.00 0.00 40.82 1.73
3961 4587 1.521457 CATGTCGTGCGTGGGCTAT 60.521 57.895 0.00 0.00 40.82 2.97
3962 4588 2.125713 CATGTCGTGCGTGGGCTA 60.126 61.111 0.00 0.00 40.82 3.93
3967 4593 1.288419 TAACAGCCATGTCGTGCGTG 61.288 55.000 0.00 0.00 39.29 5.34
3968 4594 0.601576 TTAACAGCCATGTCGTGCGT 60.602 50.000 0.00 0.00 39.29 5.24
3969 4595 0.515127 TTTAACAGCCATGTCGTGCG 59.485 50.000 0.00 0.00 39.29 5.34
3970 4596 1.535462 AGTTTAACAGCCATGTCGTGC 59.465 47.619 0.00 0.00 39.29 5.34
3971 4597 2.805671 TCAGTTTAACAGCCATGTCGTG 59.194 45.455 0.00 0.00 39.29 4.35
3972 4598 3.120321 TCAGTTTAACAGCCATGTCGT 57.880 42.857 0.00 0.00 39.29 4.34
3973 4599 3.498397 AGTTCAGTTTAACAGCCATGTCG 59.502 43.478 0.00 0.00 39.29 4.35
3974 4600 4.515191 TCAGTTCAGTTTAACAGCCATGTC 59.485 41.667 0.00 0.00 39.29 3.06
3975 4601 4.460263 TCAGTTCAGTTTAACAGCCATGT 58.540 39.130 0.00 0.00 43.15 3.21
3976 4602 5.396484 CATCAGTTCAGTTTAACAGCCATG 58.604 41.667 0.00 0.00 0.00 3.66
3977 4603 4.082571 GCATCAGTTCAGTTTAACAGCCAT 60.083 41.667 0.00 0.00 0.00 4.40
3978 4604 3.253188 GCATCAGTTCAGTTTAACAGCCA 59.747 43.478 0.00 0.00 0.00 4.75
3979 4605 3.366374 GGCATCAGTTCAGTTTAACAGCC 60.366 47.826 0.00 0.00 32.37 4.85
3980 4606 3.366374 GGGCATCAGTTCAGTTTAACAGC 60.366 47.826 0.00 0.00 0.00 4.40
3981 4607 4.074970 AGGGCATCAGTTCAGTTTAACAG 58.925 43.478 0.00 0.00 0.00 3.16
3982 4608 4.072131 GAGGGCATCAGTTCAGTTTAACA 58.928 43.478 0.00 0.00 0.00 2.41
3983 4609 3.125316 CGAGGGCATCAGTTCAGTTTAAC 59.875 47.826 0.00 0.00 0.00 2.01
3984 4610 3.244422 ACGAGGGCATCAGTTCAGTTTAA 60.244 43.478 0.00 0.00 0.00 1.52
3985 4611 2.301870 ACGAGGGCATCAGTTCAGTTTA 59.698 45.455 0.00 0.00 0.00 2.01
3986 4612 1.072331 ACGAGGGCATCAGTTCAGTTT 59.928 47.619 0.00 0.00 0.00 2.66
3987 4613 0.687354 ACGAGGGCATCAGTTCAGTT 59.313 50.000 0.00 0.00 0.00 3.16
3988 4614 0.687354 AACGAGGGCATCAGTTCAGT 59.313 50.000 0.00 0.00 0.00 3.41
3989 4615 2.544685 CTAACGAGGGCATCAGTTCAG 58.455 52.381 11.36 6.08 0.00 3.02
3990 4616 1.405526 GCTAACGAGGGCATCAGTTCA 60.406 52.381 11.36 1.55 0.00 3.18
3991 4617 1.134670 AGCTAACGAGGGCATCAGTTC 60.135 52.381 11.36 1.70 0.00 3.01
3992 4618 0.905357 AGCTAACGAGGGCATCAGTT 59.095 50.000 12.34 12.34 0.00 3.16
3993 4619 0.176680 CAGCTAACGAGGGCATCAGT 59.823 55.000 0.00 0.00 0.00 3.41
3994 4620 0.176680 ACAGCTAACGAGGGCATCAG 59.823 55.000 0.00 0.00 0.00 2.90
3995 4621 0.613260 AACAGCTAACGAGGGCATCA 59.387 50.000 0.00 0.00 0.00 3.07
3996 4622 1.009829 CAACAGCTAACGAGGGCATC 58.990 55.000 0.00 0.00 0.00 3.91
3997 4623 0.392998 CCAACAGCTAACGAGGGCAT 60.393 55.000 0.00 0.00 0.00 4.40
3998 4624 1.003839 CCAACAGCTAACGAGGGCA 60.004 57.895 0.00 0.00 0.00 5.36
3999 4625 1.745489 CCCAACAGCTAACGAGGGC 60.745 63.158 0.00 0.00 0.00 5.19
4000 4626 1.078426 CCCCAACAGCTAACGAGGG 60.078 63.158 0.00 0.00 36.04 4.30
4001 4627 1.078426 CCCCCAACAGCTAACGAGG 60.078 63.158 0.00 0.00 0.00 4.63
4002 4628 1.745489 GCCCCCAACAGCTAACGAG 60.745 63.158 0.00 0.00 0.00 4.18
4003 4629 2.221299 AGCCCCCAACAGCTAACGA 61.221 57.895 0.00 0.00 37.64 3.85
4004 4630 2.040544 CAGCCCCCAACAGCTAACG 61.041 63.158 0.00 0.00 37.18 3.18
4005 4631 1.678970 CCAGCCCCCAACAGCTAAC 60.679 63.158 0.00 0.00 37.18 2.34
4006 4632 1.850289 TCCAGCCCCCAACAGCTAA 60.850 57.895 0.00 0.00 37.18 3.09
4007 4633 2.204074 TCCAGCCCCCAACAGCTA 60.204 61.111 0.00 0.00 37.18 3.32
4008 4634 3.971702 GTCCAGCCCCCAACAGCT 61.972 66.667 0.00 0.00 40.89 4.24
4009 4635 3.927481 GAGTCCAGCCCCCAACAGC 62.927 68.421 0.00 0.00 0.00 4.40
4010 4636 2.352805 GAGTCCAGCCCCCAACAG 59.647 66.667 0.00 0.00 0.00 3.16
4011 4637 2.449518 TGAGTCCAGCCCCCAACA 60.450 61.111 0.00 0.00 0.00 3.33
4012 4638 2.034221 GTGAGTCCAGCCCCCAAC 59.966 66.667 0.00 0.00 0.00 3.77
4013 4639 3.256960 GGTGAGTCCAGCCCCCAA 61.257 66.667 0.00 0.00 34.88 4.12
4014 4640 4.590553 TGGTGAGTCCAGCCCCCA 62.591 66.667 0.00 0.00 41.93 4.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.