Multiple sequence alignment - TraesCS2D01G546600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G546600 chr2D 100.000 4249 0 0 953 5201 623325809 623330057 0.000000e+00 7847.0
1 TraesCS2D01G546600 chr2D 100.000 463 0 0 1 463 623324857 623325319 0.000000e+00 856.0
2 TraesCS2D01G546600 chr2A 93.258 1780 89 22 2754 4508 754450373 754452146 0.000000e+00 2593.0
3 TraesCS2D01G546600 chr2A 86.583 1118 92 37 953 2053 754448674 754449750 0.000000e+00 1181.0
4 TraesCS2D01G546600 chr2A 83.505 582 39 22 2058 2619 754449820 754450364 1.680000e-134 490.0
5 TraesCS2D01G546600 chr2A 88.032 376 31 6 2077 2444 78829894 78830263 2.880000e-117 433.0
6 TraesCS2D01G546600 chr2A 87.632 380 35 5 2077 2447 16649028 16648652 1.030000e-116 431.0
7 TraesCS2D01G546600 chr2A 91.053 190 12 2 1865 2050 78829637 78829825 8.650000e-63 252.0
8 TraesCS2D01G546600 chr2A 87.879 165 17 3 94 257 754447850 754448012 1.910000e-44 191.0
9 TraesCS2D01G546600 chr2A 88.235 119 11 2 345 463 754448558 754448673 7.020000e-29 139.0
10 TraesCS2D01G546600 chr2B 88.717 2003 150 38 2059 4013 765277516 765279490 0.000000e+00 2377.0
11 TraesCS2D01G546600 chr2B 89.321 1105 48 21 965 2040 765276371 765277434 0.000000e+00 1323.0
12 TraesCS2D01G546600 chr2B 88.931 533 37 12 4107 4617 765279483 765280015 5.680000e-179 638.0
13 TraesCS2D01G546600 chr2B 81.910 691 80 27 965 1642 765212551 765213209 4.580000e-150 542.0
14 TraesCS2D01G546600 chr2B 88.889 351 26 6 1 341 765275574 765275921 2.240000e-113 420.0
15 TraesCS2D01G546600 chr2B 96.875 32 1 0 4750 4781 765280177 765280208 3.000000e-03 54.7
16 TraesCS2D01G546600 chr4A 88.830 376 31 4 2077 2444 196915807 196916179 7.940000e-123 451.0
17 TraesCS2D01G546600 chr4A 88.127 379 34 4 2077 2447 542668672 542668297 1.720000e-119 440.0
18 TraesCS2D01G546600 chr4A 87.766 376 35 4 2077 2444 604245688 604246060 3.720000e-116 429.0
19 TraesCS2D01G546600 chr4A 91.534 189 11 2 1865 2049 542668930 542668743 6.680000e-64 255.0
20 TraesCS2D01G546600 chr4A 91.534 189 11 2 1865 2049 611823201 611823014 6.680000e-64 255.0
21 TraesCS2D01G546600 chr3A 88.127 379 34 4 2077 2447 701687613 701687238 1.720000e-119 440.0
22 TraesCS2D01G546600 chr1A 88.127 379 34 4 2077 2447 417739050 417738675 1.720000e-119 440.0
23 TraesCS2D01G546600 chr1A 88.127 379 34 4 2077 2447 581394745 581394370 1.720000e-119 440.0
24 TraesCS2D01G546600 chr1A 91.053 190 12 2 1865 2050 581395002 581394814 8.650000e-63 252.0
25 TraesCS2D01G546600 chr1A 90.526 190 13 2 1865 2050 367478414 367478602 4.020000e-61 246.0
26 TraesCS2D01G546600 chr1A 90.526 190 13 2 1865 2050 417739307 417739119 4.020000e-61 246.0
27 TraesCS2D01G546600 chr6A 91.053 190 12 2 1865 2050 72183232 72183420 8.650000e-63 252.0
28 TraesCS2D01G546600 chr7D 77.612 469 68 21 1052 1515 246373868 246374304 3.110000e-62 250.0
29 TraesCS2D01G546600 chr5A 97.674 86 2 0 5093 5178 600140217 600140302 1.170000e-31 148.0
30 TraesCS2D01G546600 chr5B 96.512 86 3 0 5093 5178 589456321 589456406 5.430000e-30 143.0
31 TraesCS2D01G546600 chr5D 95.349 86 4 0 5093 5178 480978465 480978550 2.530000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G546600 chr2D 623324857 623330057 5200 False 4351.50 7847 100.0000 1 5201 2 chr2D.!!$F1 5200
1 TraesCS2D01G546600 chr2A 754447850 754452146 4296 False 918.80 2593 87.8920 94 4508 5 chr2A.!!$F2 4414
2 TraesCS2D01G546600 chr2A 78829637 78830263 626 False 342.50 433 89.5425 1865 2444 2 chr2A.!!$F1 579
3 TraesCS2D01G546600 chr2B 765275574 765280208 4634 False 962.54 2377 90.5466 1 4781 5 chr2B.!!$F2 4780
4 TraesCS2D01G546600 chr2B 765212551 765213209 658 False 542.00 542 81.9100 965 1642 1 chr2B.!!$F1 677
5 TraesCS2D01G546600 chr4A 542668297 542668930 633 True 347.50 440 89.8305 1865 2447 2 chr4A.!!$R2 582
6 TraesCS2D01G546600 chr1A 581394370 581395002 632 True 346.00 440 89.5900 1865 2447 2 chr1A.!!$R2 582
7 TraesCS2D01G546600 chr1A 417738675 417739307 632 True 343.00 440 89.3265 1865 2447 2 chr1A.!!$R1 582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
223 232 0.032267 TGACGCGTCACCAACATACA 59.968 50.000 36.40 11.93 34.14 2.29 F
425 894 1.074248 ACAAACCCACCCACCGATC 59.926 57.895 0.00 0.00 0.00 3.69 F
1687 2513 0.396435 ATGCAACCGTTGTCCTGAGA 59.604 50.000 12.77 0.00 0.00 3.27 F
1941 2772 0.319900 TCTTGTCTGTTCCTCGCAGC 60.320 55.000 0.00 0.00 34.21 5.25 F
3065 4023 0.108186 TGGACGGCAGATGTGATGTC 60.108 55.000 0.00 0.03 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1666 2483 0.107643 TCAGGACAACGGTTGCATCA 59.892 50.0 20.20 0.0 0.00 3.07 R
1928 2759 0.175302 ATCTGAGCTGCGAGGAACAG 59.825 55.0 0.00 0.0 38.22 3.16 R
3050 4008 0.176449 TGAGGACATCACATCTGCCG 59.824 55.0 0.00 0.0 31.12 5.69 R
3729 4703 0.827507 GGCAAAGGTTCCTGAAGCCA 60.828 55.0 18.17 0.0 40.29 4.75 R
4919 5996 0.036388 GACATGAAGGCGACAAGGGA 60.036 55.0 0.00 0.0 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
223 232 0.032267 TGACGCGTCACCAACATACA 59.968 50.000 36.40 11.93 34.14 2.29
225 234 1.527736 GACGCGTCACCAACATACAAA 59.472 47.619 33.09 0.00 0.00 2.83
271 413 7.946655 ATCTCATTAATCGATCGTGCTTAAA 57.053 32.000 15.94 3.11 0.00 1.52
275 417 6.754675 TCATTAATCGATCGTGCTTAAACAGA 59.245 34.615 15.94 12.89 0.00 3.41
284 429 7.370836 CGATCGTGCTTAAACAGAATTACAATC 59.629 37.037 7.03 0.00 0.00 2.67
286 431 7.295201 TCGTGCTTAAACAGAATTACAATCAC 58.705 34.615 0.00 0.00 0.00 3.06
314 467 8.877864 TTAGAATATTCCCTCAGCAAAAGAAA 57.122 30.769 11.92 0.00 0.00 2.52
322 744 7.595819 TCCCTCAGCAAAAGAAAAAGATTAA 57.404 32.000 0.00 0.00 0.00 1.40
353 822 6.515043 ACACGAATTAATATAAACCGACCG 57.485 37.500 0.00 0.00 0.00 4.79
354 823 6.272318 ACACGAATTAATATAAACCGACCGA 58.728 36.000 0.00 0.00 0.00 4.69
424 893 1.228429 CACAAACCCACCCACCGAT 60.228 57.895 0.00 0.00 0.00 4.18
425 894 1.074248 ACAAACCCACCCACCGATC 59.926 57.895 0.00 0.00 0.00 3.69
426 895 1.677633 CAAACCCACCCACCGATCC 60.678 63.158 0.00 0.00 0.00 3.36
427 896 3.262448 AAACCCACCCACCGATCCG 62.262 63.158 0.00 0.00 0.00 4.18
429 898 4.157120 CCCACCCACCGATCCGTC 62.157 72.222 0.00 0.00 0.00 4.79
430 899 3.387091 CCACCCACCGATCCGTCA 61.387 66.667 0.00 0.00 0.00 4.35
431 900 2.125673 CACCCACCGATCCGTCAC 60.126 66.667 0.00 0.00 0.00 3.67
435 904 1.740296 CCACCGATCCGTCACAACC 60.740 63.158 0.00 0.00 0.00 3.77
437 906 2.211410 ACCGATCCGTCACAACCCA 61.211 57.895 0.00 0.00 0.00 4.51
1218 2019 2.046285 CAACGCCAACTCCATCCCC 61.046 63.158 0.00 0.00 0.00 4.81
1381 2182 3.549433 TACCTCGGGGTCAAGGGCA 62.549 63.158 12.33 0.00 45.98 5.36
1382 2183 4.410400 CCTCGGGGTCAAGGGCAC 62.410 72.222 0.00 0.00 0.00 5.01
1403 2204 4.821589 CGAGAGGAACAGGGCCGC 62.822 72.222 0.00 0.00 0.00 6.53
1531 2342 1.551452 CGGTGAGAAACTCCTCCTCT 58.449 55.000 0.00 0.00 32.32 3.69
1537 2348 3.829601 TGAGAAACTCCTCCTCTTCTCAC 59.170 47.826 8.82 0.00 45.43 3.51
1543 2354 3.169099 CTCCTCCTCTTCTCACCTTGAA 58.831 50.000 0.00 0.00 0.00 2.69
1615 2432 2.076622 AACGGCGGATCTCGGATCTG 62.077 60.000 13.24 14.79 39.69 2.90
1645 2462 4.021719 TCGTCACCTTTACCCTAGTTCTTG 60.022 45.833 0.00 0.00 0.00 3.02
1684 2510 1.167851 ATGATGCAACCGTTGTCCTG 58.832 50.000 12.77 0.00 0.00 3.86
1687 2513 0.396435 ATGCAACCGTTGTCCTGAGA 59.604 50.000 12.77 0.00 0.00 3.27
1719 2549 5.789574 TCCTCTTTTGGGGCTTAATTAGA 57.210 39.130 0.00 0.00 40.84 2.10
1750 2580 4.265893 TGTTGACGTACGGGTAGGTTATA 58.734 43.478 21.06 0.00 34.70 0.98
1804 2634 2.711311 CAATGGCCATGAGTCGCG 59.289 61.111 21.63 0.00 0.00 5.87
1833 2663 1.146982 ACTTGCACAGGGGTTAATGGT 59.853 47.619 0.00 0.00 0.00 3.55
1845 2675 3.534554 GGTTAATGGTACCCGATTCGTT 58.465 45.455 10.07 0.00 0.00 3.85
1847 2677 2.773993 AATGGTACCCGATTCGTTGT 57.226 45.000 10.07 4.67 0.00 3.32
1919 2750 0.532640 GTGGCTGCCTTTTTGGGTTG 60.533 55.000 21.03 0.00 36.00 3.77
1928 2759 3.792401 CCTTTTTGGGTTGGTTCTTGTC 58.208 45.455 0.00 0.00 0.00 3.18
1941 2772 0.319900 TCTTGTCTGTTCCTCGCAGC 60.320 55.000 0.00 0.00 34.21 5.25
2010 2846 6.455113 CCAGTTGATCATACGAACTTAAACCG 60.455 42.308 0.00 0.00 0.00 4.44
2053 2896 5.676532 TTAACCATACCTGACAACGTTTG 57.323 39.130 0.00 0.00 0.00 2.93
2054 2897 2.500229 ACCATACCTGACAACGTTTGG 58.500 47.619 0.00 3.71 37.19 3.28
2055 2898 2.105134 ACCATACCTGACAACGTTTGGA 59.895 45.455 16.18 0.00 35.41 3.53
2071 2981 5.046159 ACGTTTGGAAGTATGGTGATTAGGA 60.046 40.000 0.00 0.00 0.00 2.94
2118 3031 0.928726 ACTGGGCCATGGGGGAATAA 60.929 55.000 15.13 0.00 40.01 1.40
2120 3033 1.152333 GGGCCATGGGGGAATAACC 60.152 63.158 15.13 2.80 40.01 2.85
2149 3066 6.569179 AGCAAACAAACGTTATGTATCCTT 57.431 33.333 0.00 0.00 0.00 3.36
2150 3067 7.675962 AGCAAACAAACGTTATGTATCCTTA 57.324 32.000 0.00 0.00 0.00 2.69
2151 3068 8.276252 AGCAAACAAACGTTATGTATCCTTAT 57.724 30.769 0.00 0.00 0.00 1.73
2193 3119 2.165437 TGGCCACTTTCACTTGAACAAC 59.835 45.455 0.00 0.00 33.13 3.32
2267 3200 2.945668 GTTCTGATATGTGGCCACCTTC 59.054 50.000 32.62 24.27 0.00 3.46
2315 3248 7.808672 ACATTGCAATTGGAATTGTTGTATTG 58.191 30.769 21.12 11.54 45.77 1.90
2356 3289 2.236893 TGCTGCTGACCAGTTGATCATA 59.763 45.455 0.00 0.00 43.71 2.15
2357 3290 3.118149 TGCTGCTGACCAGTTGATCATAT 60.118 43.478 0.00 0.00 43.71 1.78
2412 3350 7.415653 GGGAATTAACCAGATCTGACAATGTTC 60.416 40.741 24.62 17.63 0.00 3.18
2414 3352 7.621428 ATTAACCAGATCTGACAATGTTCAG 57.379 36.000 24.62 5.56 43.93 3.02
2435 3373 9.170584 GTTCAGTCACAACTATTTTTAAGCTTC 57.829 33.333 0.00 0.00 33.25 3.86
2444 3382 9.827411 CAACTATTTTTAAGCTTCTTCAGTACC 57.173 33.333 0.00 0.00 0.00 3.34
2447 3385 9.220767 CTATTTTTAAGCTTCTTCAGTACCACT 57.779 33.333 0.00 0.00 0.00 4.00
2449 3387 8.603242 TTTTTAAGCTTCTTCAGTACCACTAG 57.397 34.615 0.00 0.00 0.00 2.57
2450 3388 3.878160 AGCTTCTTCAGTACCACTAGC 57.122 47.619 0.00 0.00 0.00 3.42
2451 3389 3.436243 AGCTTCTTCAGTACCACTAGCT 58.564 45.455 0.00 0.00 32.11 3.32
2452 3390 3.835395 AGCTTCTTCAGTACCACTAGCTT 59.165 43.478 0.00 0.00 32.85 3.74
2453 3391 5.017490 AGCTTCTTCAGTACCACTAGCTTA 58.983 41.667 0.00 0.00 32.85 3.09
2454 3392 5.659079 AGCTTCTTCAGTACCACTAGCTTAT 59.341 40.000 0.00 0.00 32.85 1.73
2455 3393 6.834451 AGCTTCTTCAGTACCACTAGCTTATA 59.166 38.462 0.00 0.00 32.85 0.98
2456 3394 7.507616 AGCTTCTTCAGTACCACTAGCTTATAT 59.492 37.037 0.00 0.00 32.85 0.86
2457 3395 8.794553 GCTTCTTCAGTACCACTAGCTTATATA 58.205 37.037 0.00 0.00 0.00 0.86
2509 3447 7.095607 GGTGATTATGCTGTTAGTAGTATGTGC 60.096 40.741 0.00 0.00 0.00 4.57
2516 3454 6.604396 TGCTGTTAGTAGTATGTGCTAGGTTA 59.396 38.462 0.00 0.00 0.00 2.85
2524 3463 5.446860 AGTATGTGCTAGGTTACTGCTCTA 58.553 41.667 0.00 0.00 0.00 2.43
2526 3465 3.698289 TGTGCTAGGTTACTGCTCTACT 58.302 45.455 0.00 0.00 0.00 2.57
2528 3467 4.158025 TGTGCTAGGTTACTGCTCTACTTC 59.842 45.833 0.00 0.00 0.00 3.01
2537 3476 4.513198 ACTGCTCTACTTCTTCTGTCAC 57.487 45.455 0.00 0.00 0.00 3.67
2540 3479 3.508012 TGCTCTACTTCTTCTGTCACCTC 59.492 47.826 0.00 0.00 0.00 3.85
2584 3526 5.748630 GGAAAAACAGAAGAAGCAAACGAAT 59.251 36.000 0.00 0.00 0.00 3.34
2600 3542 1.202336 CGAATGCCTTGGCAGGAAATC 60.202 52.381 19.53 10.98 44.19 2.17
2624 3569 8.306680 TCGATCTAGTTAAAACTGTTTGAAGG 57.693 34.615 6.53 0.06 40.07 3.46
2630 3575 6.999950 AGTTAAAACTGTTTGAAGGTTTGGT 58.000 32.000 6.53 0.00 37.63 3.67
2631 3576 8.124808 AGTTAAAACTGTTTGAAGGTTTGGTA 57.875 30.769 6.53 0.00 37.63 3.25
2632 3577 8.030692 AGTTAAAACTGTTTGAAGGTTTGGTAC 58.969 33.333 6.53 0.00 37.63 3.34
2646 3591 0.553819 TGGTACACCCTTTGCCTGTT 59.446 50.000 0.00 0.00 34.29 3.16
2647 3592 1.775459 TGGTACACCCTTTGCCTGTTA 59.225 47.619 0.00 0.00 34.29 2.41
2649 3594 2.156917 GTACACCCTTTGCCTGTTACC 58.843 52.381 0.00 0.00 0.00 2.85
2685 3631 3.199508 AGATGAGTTAAGTGAGCATGGCT 59.800 43.478 0.00 0.00 43.88 4.75
2697 3643 3.091633 AGCATGGCTCTTAATTGGTGT 57.908 42.857 0.00 0.00 30.62 4.16
2698 3644 2.756760 AGCATGGCTCTTAATTGGTGTG 59.243 45.455 0.00 0.00 30.62 3.82
2701 3647 2.790433 TGGCTCTTAATTGGTGTGGTC 58.210 47.619 0.00 0.00 0.00 4.02
2702 3648 2.092323 GGCTCTTAATTGGTGTGGTCC 58.908 52.381 0.00 0.00 0.00 4.46
2703 3649 2.290960 GGCTCTTAATTGGTGTGGTCCT 60.291 50.000 0.00 0.00 0.00 3.85
2704 3650 3.054655 GGCTCTTAATTGGTGTGGTCCTA 60.055 47.826 0.00 0.00 0.00 2.94
2705 3651 4.192317 GCTCTTAATTGGTGTGGTCCTAG 58.808 47.826 0.00 0.00 0.00 3.02
2711 3657 1.938585 TGGTGTGGTCCTAGGAAGAG 58.061 55.000 14.65 0.00 0.00 2.85
2713 3659 1.552719 GGTGTGGTCCTAGGAAGAGGT 60.553 57.143 14.65 0.00 37.88 3.85
2714 3660 2.292061 GGTGTGGTCCTAGGAAGAGGTA 60.292 54.545 14.65 0.00 37.88 3.08
2719 3665 4.531339 GTGGTCCTAGGAAGAGGTAAAGTT 59.469 45.833 14.65 0.00 37.88 2.66
2730 3676 5.048846 AGAGGTAAAGTTGGTGTGATTGT 57.951 39.130 0.00 0.00 0.00 2.71
2733 3679 6.485648 AGAGGTAAAGTTGGTGTGATTGTAAC 59.514 38.462 0.00 0.00 0.00 2.50
2747 3693 5.643777 GTGATTGTAACTGTGGCACTCTTAT 59.356 40.000 19.83 3.41 0.00 1.73
2751 3697 5.670485 TGTAACTGTGGCACTCTTATATGG 58.330 41.667 19.83 0.79 0.00 2.74
2760 3711 5.965922 GGCACTCTTATATGGCAAGTTTTT 58.034 37.500 0.00 0.00 40.91 1.94
2789 3743 7.252965 TGTTGACTGATTCATCGTTTGTAAA 57.747 32.000 0.00 0.00 32.84 2.01
2810 3764 8.791675 TGTAAATATTTTGCTGTTGACTGATGA 58.208 29.630 5.91 0.00 0.00 2.92
2818 3772 4.275689 TGCTGTTGACTGATGAATCGTTTT 59.724 37.500 0.00 0.00 0.00 2.43
2819 3773 5.468409 TGCTGTTGACTGATGAATCGTTTTA 59.532 36.000 0.00 0.00 0.00 1.52
2834 3792 2.292016 CGTTTTAATGGTGTGTGCAGGA 59.708 45.455 0.00 0.00 0.00 3.86
2891 3849 4.942761 AAGCATCAACCAAATTGTCACT 57.057 36.364 0.00 0.00 39.54 3.41
2912 3870 7.541826 TCACTGGTGAGATGGTGACATTATCT 61.542 42.308 0.00 4.60 42.67 1.98
2933 3891 2.331132 GCAGGAGCTTGTGGAGTGC 61.331 63.158 0.00 0.00 37.91 4.40
2938 3896 0.671781 GAGCTTGTGGAGTGCGACAT 60.672 55.000 0.00 0.00 32.63 3.06
2942 3900 2.079158 CTTGTGGAGTGCGACATCAAT 58.921 47.619 0.00 0.00 32.63 2.57
2945 3903 1.026182 TGGAGTGCGACATCAATGGC 61.026 55.000 0.00 0.00 0.00 4.40
2969 3927 2.283388 AGTGGCTGCAATGGTGGG 60.283 61.111 0.50 0.00 0.00 4.61
3045 4003 2.754946 TGACTACCCTTACAAAGCCG 57.245 50.000 0.00 0.00 0.00 5.52
3047 4005 2.289195 TGACTACCCTTACAAAGCCGTG 60.289 50.000 0.00 0.00 0.00 4.94
3050 4008 0.250597 ACCCTTACAAAGCCGTGGAC 60.251 55.000 0.00 0.00 0.00 4.02
3065 4023 0.108186 TGGACGGCAGATGTGATGTC 60.108 55.000 0.00 0.03 0.00 3.06
3086 4044 1.906574 CTCAGGGTGGGTACTTGCTTA 59.093 52.381 0.00 0.00 0.00 3.09
3090 4048 2.305052 AGGGTGGGTACTTGCTTACTTC 59.695 50.000 0.00 0.00 0.00 3.01
3104 4066 6.420913 TGCTTACTTCCTTCATATAGTCCC 57.579 41.667 0.00 0.00 0.00 4.46
3131 4093 1.326852 CAGATGATGCTCGTTGCTGAC 59.673 52.381 5.00 0.00 43.37 3.51
3132 4094 0.654683 GATGATGCTCGTTGCTGACC 59.345 55.000 5.00 0.00 43.37 4.02
3221 4191 5.355350 GTCCCTGAAAATGATGAGAAATCGT 59.645 40.000 0.00 0.00 0.00 3.73
3295 4265 1.501582 GGGAGTTCCAGCTCTACCAT 58.498 55.000 0.00 0.00 37.91 3.55
3382 4356 1.064166 ACAGGCCCCTTGATTGATCTG 60.064 52.381 0.00 0.00 0.00 2.90
3462 4436 0.546122 TTGGCTATGGCACCGAGAAT 59.454 50.000 2.58 0.00 37.98 2.40
3480 4454 3.525199 AGAATGGCAAGGACTACTGGATT 59.475 43.478 0.00 0.00 0.00 3.01
3585 4559 2.027837 CGGGATAGCCATGATGTCATCA 60.028 50.000 17.70 17.70 44.55 3.07
3678 4652 4.309950 GTCGCCCCTGACCACGTT 62.310 66.667 0.00 0.00 32.61 3.99
3729 4703 2.024918 CACCTGCTGCTGTTCGTTT 58.975 52.632 0.00 0.00 0.00 3.60
3798 4772 0.395311 CCACCTGCTGCAAGGATCAT 60.395 55.000 20.14 0.00 40.02 2.45
3979 4961 1.238439 TGCAAGTTAGGCAGTTCTGC 58.762 50.000 15.41 15.41 36.11 4.26
4104 5087 3.393089 AGTAGAAAGCCATAGCGGATG 57.607 47.619 0.00 0.00 46.67 3.51
4279 5266 3.612247 CTCCCTCCGTGCACCCAAG 62.612 68.421 12.15 6.04 0.00 3.61
4325 5315 6.449698 ACCAGACATTGCTTTTGTAGAATTG 58.550 36.000 0.00 0.00 0.00 2.32
4357 5349 7.750014 GCTTAGTATTACGATTCTAGCAGTACC 59.250 40.741 0.00 0.00 0.00 3.34
4394 5401 5.461516 TCCCCTACTTCTACATGTACTCA 57.538 43.478 0.08 0.00 0.00 3.41
4539 5548 3.257375 AGCTTTTGATGCTCTGATTTGCA 59.743 39.130 0.00 0.00 43.67 4.08
4546 5555 2.493035 TGCTCTGATTTGCAGTTCGAA 58.507 42.857 0.00 0.00 45.14 3.71
4557 5566 2.224523 TGCAGTTCGAATTTCCTGGAGT 60.225 45.455 13.48 0.00 0.00 3.85
4560 5569 3.612860 CAGTTCGAATTTCCTGGAGTACG 59.387 47.826 0.00 2.70 0.00 3.67
4565 5574 2.674796 ATTTCCTGGAGTACGTCTGC 57.325 50.000 0.00 0.00 35.00 4.26
4573 5582 3.650139 TGGAGTACGTCTGCTTTCTTTC 58.350 45.455 0.00 0.00 35.48 2.62
4584 5593 5.065218 GTCTGCTTTCTTTCTGAACTGAACA 59.935 40.000 5.01 2.09 33.88 3.18
4585 5594 5.647658 TCTGCTTTCTTTCTGAACTGAACAA 59.352 36.000 5.01 0.00 33.88 2.83
4624 5701 2.743126 TGTCGTTTGTTTCTCACCGTTT 59.257 40.909 0.00 0.00 0.00 3.60
4640 5717 9.048446 TCTCACCGTTTATATAATAAAGTTGCC 57.952 33.333 0.00 0.00 0.00 4.52
4641 5718 8.156994 TCACCGTTTATATAATAAAGTTGCCC 57.843 34.615 0.00 0.00 0.00 5.36
4642 5719 7.041916 TCACCGTTTATATAATAAAGTTGCCCG 60.042 37.037 0.00 0.00 0.00 6.13
4644 5721 5.786574 CGTTTATATAATAAAGTTGCCCGCG 59.213 40.000 0.00 0.00 0.00 6.46
4645 5722 3.824414 ATATAATAAAGTTGCCCGCGC 57.176 42.857 0.00 0.00 0.00 6.86
4647 5724 1.020333 TAATAAAGTTGCCCGCGCGT 61.020 50.000 29.95 10.01 38.08 6.01
4648 5725 1.858372 AATAAAGTTGCCCGCGCGTT 61.858 50.000 29.95 16.63 38.08 4.84
4657 5734 4.817063 CCGCGCGTTGCAATGGAG 62.817 66.667 29.95 11.33 46.97 3.86
4658 5735 4.817063 CGCGCGTTGCAATGGAGG 62.817 66.667 24.19 4.59 46.97 4.30
4667 5744 4.319766 GCGTTGCAATGGAGGAACATATAG 60.320 45.833 19.93 0.00 39.47 1.31
4678 5755 9.614792 ATGGAGGAACATATAGTTTAGTTGTTC 57.385 33.333 5.72 5.72 43.31 3.18
4679 5756 8.598916 TGGAGGAACATATAGTTTAGTTGTTCA 58.401 33.333 13.99 0.00 44.93 3.18
4690 5767 6.407202 AGTTTAGTTGTTCAACAGAGAGTGT 58.593 36.000 16.31 0.00 43.24 3.55
4692 5769 4.744795 AGTTGTTCAACAGAGAGTGTCT 57.255 40.909 16.31 0.00 39.03 3.41
4693 5770 5.854010 AGTTGTTCAACAGAGAGTGTCTA 57.146 39.130 16.31 0.00 39.03 2.59
4694 5771 5.837437 AGTTGTTCAACAGAGAGTGTCTAG 58.163 41.667 16.31 0.00 39.03 2.43
4695 5772 5.594725 AGTTGTTCAACAGAGAGTGTCTAGA 59.405 40.000 16.31 0.00 39.03 2.43
4696 5773 6.266558 AGTTGTTCAACAGAGAGTGTCTAGAT 59.733 38.462 16.31 0.00 39.03 1.98
4697 5774 7.448777 AGTTGTTCAACAGAGAGTGTCTAGATA 59.551 37.037 16.31 0.00 39.03 1.98
4698 5775 7.946381 TGTTCAACAGAGAGTGTCTAGATAT 57.054 36.000 0.00 0.00 39.03 1.63
4699 5776 7.990917 TGTTCAACAGAGAGTGTCTAGATATC 58.009 38.462 0.00 0.00 39.03 1.63
4700 5777 7.067615 TGTTCAACAGAGAGTGTCTAGATATCC 59.932 40.741 0.00 0.00 39.03 2.59
4701 5778 6.905736 TCAACAGAGAGTGTCTAGATATCCT 58.094 40.000 0.00 0.00 39.03 3.24
4702 5779 7.350382 TCAACAGAGAGTGTCTAGATATCCTT 58.650 38.462 0.00 0.00 39.03 3.36
4703 5780 7.284261 TCAACAGAGAGTGTCTAGATATCCTTG 59.716 40.741 0.00 0.00 39.03 3.61
4704 5781 5.534654 ACAGAGAGTGTCTAGATATCCTTGC 59.465 44.000 0.00 0.00 31.90 4.01
4705 5782 5.534278 CAGAGAGTGTCTAGATATCCTTGCA 59.466 44.000 0.00 0.00 32.51 4.08
4706 5783 6.209192 CAGAGAGTGTCTAGATATCCTTGCAT 59.791 42.308 0.00 0.00 32.51 3.96
4707 5784 7.392953 CAGAGAGTGTCTAGATATCCTTGCATA 59.607 40.741 0.00 0.00 32.51 3.14
4708 5785 8.115384 AGAGAGTGTCTAGATATCCTTGCATAT 58.885 37.037 0.00 0.00 31.71 1.78
4709 5786 8.663209 AGAGTGTCTAGATATCCTTGCATATT 57.337 34.615 0.00 0.00 0.00 1.28
4710 5787 9.099071 AGAGTGTCTAGATATCCTTGCATATTT 57.901 33.333 0.00 0.00 0.00 1.40
4711 5788 9.149225 GAGTGTCTAGATATCCTTGCATATTTG 57.851 37.037 0.00 0.00 0.00 2.32
4712 5789 8.654997 AGTGTCTAGATATCCTTGCATATTTGT 58.345 33.333 0.00 0.00 0.00 2.83
4713 5790 9.277783 GTGTCTAGATATCCTTGCATATTTGTT 57.722 33.333 0.00 0.00 0.00 2.83
4714 5791 9.494271 TGTCTAGATATCCTTGCATATTTGTTC 57.506 33.333 0.00 0.00 0.00 3.18
4715 5792 9.494271 GTCTAGATATCCTTGCATATTTGTTCA 57.506 33.333 0.00 0.00 0.00 3.18
4781 5858 3.817709 ACCATAAGCTCTCTCTGCTTC 57.182 47.619 4.18 0.00 46.39 3.86
4782 5859 3.373830 ACCATAAGCTCTCTCTGCTTCT 58.626 45.455 4.18 0.00 46.39 2.85
4783 5860 3.774216 ACCATAAGCTCTCTCTGCTTCTT 59.226 43.478 4.18 0.00 46.39 2.52
4784 5861 4.224818 ACCATAAGCTCTCTCTGCTTCTTT 59.775 41.667 4.18 0.00 46.39 2.52
4785 5862 4.571580 CCATAAGCTCTCTCTGCTTCTTTG 59.428 45.833 4.18 2.61 46.39 2.77
4786 5863 2.097680 AGCTCTCTCTGCTTCTTTGC 57.902 50.000 0.00 0.00 37.52 3.68
4787 5864 1.085893 GCTCTCTCTGCTTCTTTGCC 58.914 55.000 0.00 0.00 0.00 4.52
4788 5865 1.610102 GCTCTCTCTGCTTCTTTGCCA 60.610 52.381 0.00 0.00 0.00 4.92
4789 5866 2.940527 GCTCTCTCTGCTTCTTTGCCAT 60.941 50.000 0.00 0.00 0.00 4.40
4790 5867 3.681034 GCTCTCTCTGCTTCTTTGCCATA 60.681 47.826 0.00 0.00 0.00 2.74
4791 5868 4.706035 CTCTCTCTGCTTCTTTGCCATAT 58.294 43.478 0.00 0.00 0.00 1.78
4792 5869 4.449131 TCTCTCTGCTTCTTTGCCATATG 58.551 43.478 0.00 0.00 0.00 1.78
4793 5870 2.947652 TCTCTGCTTCTTTGCCATATGC 59.052 45.455 0.00 0.00 41.77 3.14
4805 5882 2.157738 GCCATATGCAACTCTCCATCC 58.842 52.381 0.00 0.00 40.77 3.51
4806 5883 2.224719 GCCATATGCAACTCTCCATCCT 60.225 50.000 0.00 0.00 40.77 3.24
4807 5884 3.672808 CCATATGCAACTCTCCATCCTC 58.327 50.000 0.00 0.00 0.00 3.71
4808 5885 3.327172 CCATATGCAACTCTCCATCCTCT 59.673 47.826 0.00 0.00 0.00 3.69
4809 5886 4.202440 CCATATGCAACTCTCCATCCTCTT 60.202 45.833 0.00 0.00 0.00 2.85
4810 5887 3.557228 ATGCAACTCTCCATCCTCTTC 57.443 47.619 0.00 0.00 0.00 2.87
4811 5888 2.259917 TGCAACTCTCCATCCTCTTCA 58.740 47.619 0.00 0.00 0.00 3.02
4812 5889 2.639347 TGCAACTCTCCATCCTCTTCAA 59.361 45.455 0.00 0.00 0.00 2.69
4813 5890 3.265221 TGCAACTCTCCATCCTCTTCAAT 59.735 43.478 0.00 0.00 0.00 2.57
4814 5891 4.263639 TGCAACTCTCCATCCTCTTCAATT 60.264 41.667 0.00 0.00 0.00 2.32
4815 5892 4.335037 GCAACTCTCCATCCTCTTCAATTC 59.665 45.833 0.00 0.00 0.00 2.17
4816 5893 5.494724 CAACTCTCCATCCTCTTCAATTCA 58.505 41.667 0.00 0.00 0.00 2.57
4817 5894 5.768980 ACTCTCCATCCTCTTCAATTCAA 57.231 39.130 0.00 0.00 0.00 2.69
4818 5895 6.131972 ACTCTCCATCCTCTTCAATTCAAA 57.868 37.500 0.00 0.00 0.00 2.69
4819 5896 6.546484 ACTCTCCATCCTCTTCAATTCAAAA 58.454 36.000 0.00 0.00 0.00 2.44
4820 5897 7.006509 ACTCTCCATCCTCTTCAATTCAAAAA 58.993 34.615 0.00 0.00 0.00 1.94
4821 5898 7.673082 ACTCTCCATCCTCTTCAATTCAAAAAT 59.327 33.333 0.00 0.00 0.00 1.82
4822 5899 9.182214 CTCTCCATCCTCTTCAATTCAAAAATA 57.818 33.333 0.00 0.00 0.00 1.40
4823 5900 9.532494 TCTCCATCCTCTTCAATTCAAAAATAA 57.468 29.630 0.00 0.00 0.00 1.40
4867 5944 3.793797 AAAAGTTTTCCTGGTTGTCGG 57.206 42.857 0.00 0.00 0.00 4.79
4868 5945 2.430248 AAGTTTTCCTGGTTGTCGGT 57.570 45.000 0.00 0.00 0.00 4.69
4869 5946 2.430248 AGTTTTCCTGGTTGTCGGTT 57.570 45.000 0.00 0.00 0.00 4.44
4870 5947 2.730382 AGTTTTCCTGGTTGTCGGTTT 58.270 42.857 0.00 0.00 0.00 3.27
4871 5948 2.686405 AGTTTTCCTGGTTGTCGGTTTC 59.314 45.455 0.00 0.00 0.00 2.78
4872 5949 2.421751 TTTCCTGGTTGTCGGTTTCA 57.578 45.000 0.00 0.00 0.00 2.69
4873 5950 1.961793 TTCCTGGTTGTCGGTTTCAG 58.038 50.000 0.00 0.00 0.00 3.02
4874 5951 1.124780 TCCTGGTTGTCGGTTTCAGA 58.875 50.000 0.00 0.00 0.00 3.27
4875 5952 1.697432 TCCTGGTTGTCGGTTTCAGAT 59.303 47.619 0.00 0.00 0.00 2.90
4876 5953 1.806542 CCTGGTTGTCGGTTTCAGATG 59.193 52.381 0.00 0.00 0.00 2.90
4877 5954 2.549992 CCTGGTTGTCGGTTTCAGATGA 60.550 50.000 0.00 0.00 0.00 2.92
4878 5955 3.338249 CTGGTTGTCGGTTTCAGATGAT 58.662 45.455 0.00 0.00 0.00 2.45
4879 5956 3.750371 TGGTTGTCGGTTTCAGATGATT 58.250 40.909 0.00 0.00 0.00 2.57
4880 5957 3.501828 TGGTTGTCGGTTTCAGATGATTG 59.498 43.478 0.00 0.00 0.00 2.67
4881 5958 3.751175 GGTTGTCGGTTTCAGATGATTGA 59.249 43.478 0.00 0.00 0.00 2.57
4882 5959 4.396166 GGTTGTCGGTTTCAGATGATTGAT 59.604 41.667 0.00 0.00 0.00 2.57
4883 5960 5.106157 GGTTGTCGGTTTCAGATGATTGATT 60.106 40.000 0.00 0.00 0.00 2.57
4884 5961 6.381801 GTTGTCGGTTTCAGATGATTGATTT 58.618 36.000 0.00 0.00 0.00 2.17
4885 5962 6.573664 TGTCGGTTTCAGATGATTGATTTT 57.426 33.333 0.00 0.00 0.00 1.82
4886 5963 6.980593 TGTCGGTTTCAGATGATTGATTTTT 58.019 32.000 0.00 0.00 0.00 1.94
4903 5980 1.408969 TTTTTCAGTGAACCCCCTGC 58.591 50.000 4.68 0.00 0.00 4.85
4904 5981 0.821711 TTTTCAGTGAACCCCCTGCG 60.822 55.000 4.68 0.00 0.00 5.18
4905 5982 3.842925 TTCAGTGAACCCCCTGCGC 62.843 63.158 0.00 0.00 0.00 6.09
4906 5983 4.335647 CAGTGAACCCCCTGCGCT 62.336 66.667 9.73 0.00 0.00 5.92
4907 5984 4.021925 AGTGAACCCCCTGCGCTC 62.022 66.667 9.73 0.00 0.00 5.03
4908 5985 4.021925 GTGAACCCCCTGCGCTCT 62.022 66.667 9.73 0.00 0.00 4.09
4909 5986 3.706373 TGAACCCCCTGCGCTCTC 61.706 66.667 9.73 0.00 0.00 3.20
4910 5987 3.394836 GAACCCCCTGCGCTCTCT 61.395 66.667 9.73 0.00 0.00 3.10
4911 5988 2.930562 AACCCCCTGCGCTCTCTT 60.931 61.111 9.73 0.00 0.00 2.85
4912 5989 2.470938 GAACCCCCTGCGCTCTCTTT 62.471 60.000 9.73 0.00 0.00 2.52
4913 5990 2.437359 CCCCCTGCGCTCTCTTTG 60.437 66.667 9.73 0.00 0.00 2.77
4914 5991 3.130160 CCCCTGCGCTCTCTTTGC 61.130 66.667 9.73 0.00 0.00 3.68
4915 5992 3.130160 CCCTGCGCTCTCTTTGCC 61.130 66.667 9.73 0.00 0.00 4.52
4916 5993 3.494336 CCTGCGCTCTCTTTGCCG 61.494 66.667 9.73 0.00 0.00 5.69
4917 5994 2.740055 CTGCGCTCTCTTTGCCGT 60.740 61.111 9.73 0.00 0.00 5.68
4918 5995 1.446099 CTGCGCTCTCTTTGCCGTA 60.446 57.895 9.73 0.00 0.00 4.02
4919 5996 0.807667 CTGCGCTCTCTTTGCCGTAT 60.808 55.000 9.73 0.00 0.00 3.06
4920 5997 0.806102 TGCGCTCTCTTTGCCGTATC 60.806 55.000 9.73 0.00 0.00 2.24
4921 5998 1.491505 GCGCTCTCTTTGCCGTATCC 61.492 60.000 0.00 0.00 0.00 2.59
4922 5999 0.876342 CGCTCTCTTTGCCGTATCCC 60.876 60.000 0.00 0.00 0.00 3.85
4923 6000 0.466124 GCTCTCTTTGCCGTATCCCT 59.534 55.000 0.00 0.00 0.00 4.20
4924 6001 1.134371 GCTCTCTTTGCCGTATCCCTT 60.134 52.381 0.00 0.00 0.00 3.95
4925 6002 2.555199 CTCTCTTTGCCGTATCCCTTG 58.445 52.381 0.00 0.00 0.00 3.61
4926 6003 1.906574 TCTCTTTGCCGTATCCCTTGT 59.093 47.619 0.00 0.00 0.00 3.16
4927 6004 2.093658 TCTCTTTGCCGTATCCCTTGTC 60.094 50.000 0.00 0.00 0.00 3.18
4928 6005 1.006832 CTTTGCCGTATCCCTTGTCG 58.993 55.000 0.00 0.00 0.00 4.35
4929 6006 1.022451 TTTGCCGTATCCCTTGTCGC 61.022 55.000 0.00 0.00 0.00 5.19
4930 6007 2.588034 GCCGTATCCCTTGTCGCC 60.588 66.667 0.00 0.00 0.00 5.54
4931 6008 3.090219 GCCGTATCCCTTGTCGCCT 62.090 63.158 0.00 0.00 0.00 5.52
4932 6009 1.520666 CCGTATCCCTTGTCGCCTT 59.479 57.895 0.00 0.00 0.00 4.35
4933 6010 0.529992 CCGTATCCCTTGTCGCCTTC 60.530 60.000 0.00 0.00 0.00 3.46
4934 6011 0.174845 CGTATCCCTTGTCGCCTTCA 59.825 55.000 0.00 0.00 0.00 3.02
4935 6012 1.202533 CGTATCCCTTGTCGCCTTCAT 60.203 52.381 0.00 0.00 0.00 2.57
4936 6013 2.213499 GTATCCCTTGTCGCCTTCATG 58.787 52.381 0.00 0.00 0.00 3.07
4937 6014 0.620556 ATCCCTTGTCGCCTTCATGT 59.379 50.000 0.00 0.00 0.00 3.21
4938 6015 0.036388 TCCCTTGTCGCCTTCATGTC 60.036 55.000 0.00 0.00 0.00 3.06
4939 6016 0.321564 CCCTTGTCGCCTTCATGTCA 60.322 55.000 0.00 0.00 0.00 3.58
4940 6017 1.522668 CCTTGTCGCCTTCATGTCAA 58.477 50.000 0.00 0.00 0.00 3.18
4941 6018 1.197721 CCTTGTCGCCTTCATGTCAAC 59.802 52.381 0.00 0.00 0.00 3.18
4942 6019 1.197721 CTTGTCGCCTTCATGTCAACC 59.802 52.381 0.00 0.00 0.00 3.77
4943 6020 0.396435 TGTCGCCTTCATGTCAACCT 59.604 50.000 0.00 0.00 0.00 3.50
4944 6021 1.079503 GTCGCCTTCATGTCAACCTC 58.920 55.000 0.00 0.00 0.00 3.85
4945 6022 0.684535 TCGCCTTCATGTCAACCTCA 59.315 50.000 0.00 0.00 0.00 3.86
4946 6023 1.278985 TCGCCTTCATGTCAACCTCAT 59.721 47.619 0.00 0.00 0.00 2.90
4947 6024 1.667724 CGCCTTCATGTCAACCTCATC 59.332 52.381 0.00 0.00 0.00 2.92
4948 6025 2.715046 GCCTTCATGTCAACCTCATCA 58.285 47.619 0.00 0.00 0.00 3.07
4949 6026 2.421424 GCCTTCATGTCAACCTCATCAC 59.579 50.000 0.00 0.00 0.00 3.06
4950 6027 3.012518 CCTTCATGTCAACCTCATCACC 58.987 50.000 0.00 0.00 0.00 4.02
4951 6028 2.385013 TCATGTCAACCTCATCACCG 57.615 50.000 0.00 0.00 0.00 4.94
4952 6029 0.729116 CATGTCAACCTCATCACCGC 59.271 55.000 0.00 0.00 0.00 5.68
4953 6030 0.392998 ATGTCAACCTCATCACCGCC 60.393 55.000 0.00 0.00 0.00 6.13
4954 6031 2.100631 GTCAACCTCATCACCGCCG 61.101 63.158 0.00 0.00 0.00 6.46
4955 6032 3.499737 CAACCTCATCACCGCCGC 61.500 66.667 0.00 0.00 0.00 6.53
4956 6033 4.778143 AACCTCATCACCGCCGCC 62.778 66.667 0.00 0.00 0.00 6.13
4958 6035 4.473520 CCTCATCACCGCCGCCTT 62.474 66.667 0.00 0.00 0.00 4.35
4959 6036 3.197790 CTCATCACCGCCGCCTTG 61.198 66.667 0.00 0.00 0.00 3.61
4960 6037 4.776322 TCATCACCGCCGCCTTGG 62.776 66.667 0.00 0.00 42.50 3.61
4968 6045 3.134127 GCCGCCTTGGTGTCCATC 61.134 66.667 0.00 0.00 41.21 3.51
4969 6046 2.671070 CCGCCTTGGTGTCCATCT 59.329 61.111 0.00 0.00 31.53 2.90
4970 6047 1.002134 CCGCCTTGGTGTCCATCTT 60.002 57.895 0.00 0.00 31.53 2.40
4971 6048 0.251916 CCGCCTTGGTGTCCATCTTA 59.748 55.000 0.00 0.00 31.53 2.10
4972 6049 1.369625 CGCCTTGGTGTCCATCTTAC 58.630 55.000 0.00 0.00 31.53 2.34
4973 6050 1.751437 GCCTTGGTGTCCATCTTACC 58.249 55.000 0.00 0.00 31.53 2.85
4974 6051 1.282157 GCCTTGGTGTCCATCTTACCT 59.718 52.381 0.00 0.00 35.51 3.08
4975 6052 2.290960 GCCTTGGTGTCCATCTTACCTT 60.291 50.000 0.00 0.00 35.51 3.50
4976 6053 3.610911 CCTTGGTGTCCATCTTACCTTC 58.389 50.000 0.00 0.00 35.51 3.46
4977 6054 3.262420 CTTGGTGTCCATCTTACCTTCG 58.738 50.000 0.00 0.00 35.51 3.79
4978 6055 1.553248 TGGTGTCCATCTTACCTTCGG 59.447 52.381 0.00 0.00 35.51 4.30
4979 6056 1.653151 GTGTCCATCTTACCTTCGGC 58.347 55.000 0.00 0.00 0.00 5.54
4980 6057 1.066430 GTGTCCATCTTACCTTCGGCA 60.066 52.381 0.00 0.00 0.00 5.69
4981 6058 1.066430 TGTCCATCTTACCTTCGGCAC 60.066 52.381 0.00 0.00 0.00 5.01
4982 6059 1.066430 GTCCATCTTACCTTCGGCACA 60.066 52.381 0.00 0.00 0.00 4.57
4983 6060 1.837439 TCCATCTTACCTTCGGCACAT 59.163 47.619 0.00 0.00 0.00 3.21
4984 6061 3.035363 TCCATCTTACCTTCGGCACATA 58.965 45.455 0.00 0.00 0.00 2.29
4985 6062 3.646162 TCCATCTTACCTTCGGCACATAT 59.354 43.478 0.00 0.00 0.00 1.78
4986 6063 4.836175 TCCATCTTACCTTCGGCACATATA 59.164 41.667 0.00 0.00 0.00 0.86
4987 6064 4.929808 CCATCTTACCTTCGGCACATATAC 59.070 45.833 0.00 0.00 0.00 1.47
4988 6065 4.233123 TCTTACCTTCGGCACATATACG 57.767 45.455 0.00 0.00 0.00 3.06
4989 6066 3.005050 TCTTACCTTCGGCACATATACGG 59.995 47.826 0.00 0.00 0.00 4.02
4990 6067 0.249741 ACCTTCGGCACATATACGGC 60.250 55.000 0.00 0.00 0.00 5.68
4991 6068 0.249699 CCTTCGGCACATATACGGCA 60.250 55.000 0.00 0.00 0.00 5.69
4992 6069 0.859232 CTTCGGCACATATACGGCAC 59.141 55.000 0.00 0.00 0.00 5.01
4993 6070 0.175989 TTCGGCACATATACGGCACA 59.824 50.000 0.00 0.00 0.00 4.57
4994 6071 0.528901 TCGGCACATATACGGCACAC 60.529 55.000 0.00 0.00 0.00 3.82
4995 6072 0.808060 CGGCACATATACGGCACACA 60.808 55.000 0.00 0.00 0.00 3.72
4996 6073 1.374560 GGCACATATACGGCACACAA 58.625 50.000 0.00 0.00 0.00 3.33
4997 6074 1.740585 GGCACATATACGGCACACAAA 59.259 47.619 0.00 0.00 0.00 2.83
4998 6075 2.223249 GGCACATATACGGCACACAAAG 60.223 50.000 0.00 0.00 0.00 2.77
4999 6076 2.418628 GCACATATACGGCACACAAAGT 59.581 45.455 0.00 0.00 0.00 2.66
5000 6077 3.619483 GCACATATACGGCACACAAAGTA 59.381 43.478 0.00 0.00 0.00 2.24
5001 6078 4.260212 GCACATATACGGCACACAAAGTAG 60.260 45.833 0.00 0.00 0.00 2.57
5002 6079 5.106442 CACATATACGGCACACAAAGTAGA 58.894 41.667 0.00 0.00 0.00 2.59
5003 6080 5.579119 CACATATACGGCACACAAAGTAGAA 59.421 40.000 0.00 0.00 0.00 2.10
5004 6081 5.579511 ACATATACGGCACACAAAGTAGAAC 59.420 40.000 0.00 0.00 0.00 3.01
5005 6082 2.319136 ACGGCACACAAAGTAGAACA 57.681 45.000 0.00 0.00 0.00 3.18
5006 6083 2.846193 ACGGCACACAAAGTAGAACAT 58.154 42.857 0.00 0.00 0.00 2.71
5007 6084 2.806244 ACGGCACACAAAGTAGAACATC 59.194 45.455 0.00 0.00 0.00 3.06
5008 6085 2.159627 CGGCACACAAAGTAGAACATCC 59.840 50.000 0.00 0.00 0.00 3.51
5009 6086 2.159627 GGCACACAAAGTAGAACATCCG 59.840 50.000 0.00 0.00 0.00 4.18
5010 6087 3.064207 GCACACAAAGTAGAACATCCGA 58.936 45.455 0.00 0.00 0.00 4.55
5011 6088 3.496884 GCACACAAAGTAGAACATCCGAA 59.503 43.478 0.00 0.00 0.00 4.30
5012 6089 4.024387 GCACACAAAGTAGAACATCCGAAA 60.024 41.667 0.00 0.00 0.00 3.46
5013 6090 5.334879 GCACACAAAGTAGAACATCCGAAAT 60.335 40.000 0.00 0.00 0.00 2.17
5014 6091 6.668323 CACACAAAGTAGAACATCCGAAATT 58.332 36.000 0.00 0.00 0.00 1.82
5015 6092 6.797033 CACACAAAGTAGAACATCCGAAATTC 59.203 38.462 0.00 0.00 0.00 2.17
5016 6093 6.485313 ACACAAAGTAGAACATCCGAAATTCA 59.515 34.615 0.00 0.00 0.00 2.57
5017 6094 7.012894 ACACAAAGTAGAACATCCGAAATTCAA 59.987 33.333 0.00 0.00 0.00 2.69
5018 6095 8.023128 CACAAAGTAGAACATCCGAAATTCAAT 58.977 33.333 0.00 0.00 0.00 2.57
5019 6096 9.226606 ACAAAGTAGAACATCCGAAATTCAATA 57.773 29.630 0.00 0.00 0.00 1.90
5025 6102 8.915871 AGAACATCCGAAATTCAATATTTGTG 57.084 30.769 0.00 0.00 0.00 3.33
5026 6103 8.739039 AGAACATCCGAAATTCAATATTTGTGA 58.261 29.630 0.00 0.00 0.00 3.58
5027 6104 8.687824 AACATCCGAAATTCAATATTTGTGAC 57.312 30.769 0.00 0.00 0.00 3.67
5028 6105 7.825681 ACATCCGAAATTCAATATTTGTGACA 58.174 30.769 0.00 0.00 0.00 3.58
5029 6106 8.469200 ACATCCGAAATTCAATATTTGTGACAT 58.531 29.630 0.00 0.00 0.00 3.06
5030 6107 9.949174 CATCCGAAATTCAATATTTGTGACATA 57.051 29.630 0.00 0.00 0.00 2.29
5033 6110 9.106286 CCGAAATTCAATATTTGTGACATATCG 57.894 33.333 0.00 0.00 0.00 2.92
5034 6111 8.621487 CGAAATTCAATATTTGTGACATATCGC 58.379 33.333 0.00 0.00 35.78 4.58
5035 6112 9.669353 GAAATTCAATATTTGTGACATATCGCT 57.331 29.630 0.00 0.00 36.24 4.93
5036 6113 9.669353 AAATTCAATATTTGTGACATATCGCTC 57.331 29.630 0.00 0.00 36.24 5.03
5037 6114 8.613060 ATTCAATATTTGTGACATATCGCTCT 57.387 30.769 0.00 0.00 36.24 4.09
5038 6115 8.437360 TTCAATATTTGTGACATATCGCTCTT 57.563 30.769 0.00 0.00 36.24 2.85
5039 6116 9.541143 TTCAATATTTGTGACATATCGCTCTTA 57.459 29.630 0.00 0.00 36.24 2.10
5040 6117 9.710900 TCAATATTTGTGACATATCGCTCTTAT 57.289 29.630 0.00 0.00 36.24 1.73
5043 6120 7.891183 ATTTGTGACATATCGCTCTTATACC 57.109 36.000 0.00 0.00 36.24 2.73
5044 6121 6.399639 TTGTGACATATCGCTCTTATACCA 57.600 37.500 0.00 0.00 36.24 3.25
5045 6122 6.399639 TGTGACATATCGCTCTTATACCAA 57.600 37.500 0.00 0.00 36.24 3.67
5046 6123 6.993079 TGTGACATATCGCTCTTATACCAAT 58.007 36.000 0.00 0.00 36.24 3.16
5047 6124 8.117813 TGTGACATATCGCTCTTATACCAATA 57.882 34.615 0.00 0.00 36.24 1.90
5048 6125 8.581578 TGTGACATATCGCTCTTATACCAATAA 58.418 33.333 0.00 0.00 36.24 1.40
5049 6126 9.419297 GTGACATATCGCTCTTATACCAATAAA 57.581 33.333 0.00 0.00 32.22 1.40
5050 6127 9.990360 TGACATATCGCTCTTATACCAATAAAA 57.010 29.630 0.00 0.00 0.00 1.52
5074 6151 9.546428 AAAAAGAAACTGAAATTAATCCACCAG 57.454 29.630 0.00 0.00 0.00 4.00
5075 6152 8.477419 AAAGAAACTGAAATTAATCCACCAGA 57.523 30.769 11.04 0.00 0.00 3.86
5076 6153 8.477419 AAGAAACTGAAATTAATCCACCAGAA 57.523 30.769 11.04 0.00 0.00 3.02
5077 6154 8.655935 AGAAACTGAAATTAATCCACCAGAAT 57.344 30.769 11.04 2.98 0.00 2.40
5078 6155 9.753674 AGAAACTGAAATTAATCCACCAGAATA 57.246 29.630 11.04 0.00 0.00 1.75
5081 6158 9.753674 AACTGAAATTAATCCACCAGAATAAGA 57.246 29.630 11.04 0.00 0.00 2.10
5082 6159 9.401058 ACTGAAATTAATCCACCAGAATAAGAG 57.599 33.333 11.04 0.00 0.00 2.85
5083 6160 9.401058 CTGAAATTAATCCACCAGAATAAGAGT 57.599 33.333 0.00 0.00 0.00 3.24
5084 6161 9.396022 TGAAATTAATCCACCAGAATAAGAGTC 57.604 33.333 0.00 0.00 0.00 3.36
5085 6162 8.438676 AAATTAATCCACCAGAATAAGAGTCG 57.561 34.615 0.00 0.00 0.00 4.18
5086 6163 4.408182 AATCCACCAGAATAAGAGTCGG 57.592 45.455 0.00 0.00 0.00 4.79
5087 6164 2.816411 TCCACCAGAATAAGAGTCGGT 58.184 47.619 0.00 0.00 0.00 4.69
5088 6165 2.496070 TCCACCAGAATAAGAGTCGGTG 59.504 50.000 0.00 0.00 38.39 4.94
5089 6166 2.233922 CCACCAGAATAAGAGTCGGTGT 59.766 50.000 9.40 0.00 37.67 4.16
5090 6167 3.254060 CACCAGAATAAGAGTCGGTGTG 58.746 50.000 0.00 0.00 36.14 3.82
5091 6168 2.271800 CCAGAATAAGAGTCGGTGTGC 58.728 52.381 0.00 0.00 0.00 4.57
5092 6169 2.271800 CAGAATAAGAGTCGGTGTGCC 58.728 52.381 0.00 0.00 0.00 5.01
5093 6170 1.207329 AGAATAAGAGTCGGTGTGCCC 59.793 52.381 0.00 0.00 0.00 5.36
5094 6171 0.252197 AATAAGAGTCGGTGTGCCCC 59.748 55.000 0.00 0.00 0.00 5.80
5095 6172 0.907704 ATAAGAGTCGGTGTGCCCCA 60.908 55.000 0.00 0.00 0.00 4.96
5096 6173 1.823169 TAAGAGTCGGTGTGCCCCAC 61.823 60.000 0.00 0.00 43.74 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.497842 CGTGTGGCATGTGCATGTATTATT 60.498 41.667 12.96 0.00 44.36 1.40
24 25 2.048222 CCTCGTCGTGTGGCATGT 60.048 61.111 0.00 0.00 0.00 3.21
25 26 2.048222 ACCTCGTCGTGTGGCATG 60.048 61.111 0.00 0.00 34.45 4.06
26 27 2.048222 CACCTCGTCGTGTGGCAT 60.048 61.111 8.99 0.00 34.45 4.40
27 28 3.533105 ACACCTCGTCGTGTGGCA 61.533 61.111 17.50 0.00 45.19 4.92
160 169 1.669115 CAAGATCTATGGCCGCCGG 60.669 63.158 4.58 0.00 0.00 6.13
171 180 0.181350 GGGCCGTTGGATCAAGATCT 59.819 55.000 9.69 0.00 37.92 2.75
204 213 0.032267 TGTATGTTGGTGACGCGTCA 59.968 50.000 36.40 36.40 37.24 4.35
259 401 8.175069 TGATTGTAATTCTGTTTAAGCACGATC 58.825 33.333 0.00 0.00 0.00 3.69
284 429 7.572523 TTGCTGAGGGAATATTCTAATTGTG 57.427 36.000 14.95 2.27 0.00 3.33
286 431 8.906867 TCTTTTGCTGAGGGAATATTCTAATTG 58.093 33.333 14.95 5.03 0.00 2.32
301 446 9.741647 AAGTCTTAATCTTTTTCTTTTGCTGAG 57.258 29.630 0.00 0.00 0.00 3.35
341 763 1.134175 GTCGGGTTCGGTCGGTTTATA 59.866 52.381 0.00 0.00 36.95 0.98
342 764 0.108662 GTCGGGTTCGGTCGGTTTAT 60.109 55.000 0.00 0.00 36.95 1.40
343 765 1.288752 GTCGGGTTCGGTCGGTTTA 59.711 57.895 0.00 0.00 36.95 2.01
353 822 4.754667 GTGCGAGGGGTCGGGTTC 62.755 72.222 0.00 0.00 0.00 3.62
367 836 2.993899 CGGTCGGATTTATAGATGGTGC 59.006 50.000 0.00 0.00 0.00 5.01
369 838 2.631062 TGCGGTCGGATTTATAGATGGT 59.369 45.455 0.00 0.00 0.00 3.55
424 893 1.835494 TTTTTGTGGGTTGTGACGGA 58.165 45.000 0.00 0.00 0.00 4.69
962 1733 4.539881 GACGGGCGTCGCTCTCTC 62.540 72.222 16.38 5.71 43.89 3.20
1030 1819 3.478274 GAGCAGGGCCAGGAGGAG 61.478 72.222 6.18 0.00 36.89 3.69
1033 1822 3.795041 CAGGAGCAGGGCCAGGAG 61.795 72.222 6.18 0.00 0.00 3.69
1036 1825 4.486503 GAGCAGGAGCAGGGCCAG 62.487 72.222 6.18 0.00 45.49 4.85
1381 2182 3.382832 CCTGTTCCTCTCGGCGGT 61.383 66.667 7.21 0.00 0.00 5.68
1382 2183 4.148825 CCCTGTTCCTCTCGGCGG 62.149 72.222 7.21 0.00 0.00 6.13
1383 2184 4.821589 GCCCTGTTCCTCTCGGCG 62.822 72.222 0.00 0.00 0.00 6.46
1384 2185 4.475135 GGCCCTGTTCCTCTCGGC 62.475 72.222 0.00 0.00 38.96 5.54
1385 2186 4.148825 CGGCCCTGTTCCTCTCGG 62.149 72.222 0.00 0.00 0.00 4.63
1386 2187 4.821589 GCGGCCCTGTTCCTCTCG 62.822 72.222 0.00 0.00 0.00 4.04
1387 2188 4.475135 GGCGGCCCTGTTCCTCTC 62.475 72.222 8.12 0.00 0.00 3.20
1416 2217 2.478890 ATCGTGGCGGTACCTCTCG 61.479 63.158 10.90 13.93 40.22 4.04
1452 2253 3.827898 CTCCAGTCGACGGCCTCC 61.828 72.222 17.95 0.00 0.00 4.30
1531 2342 5.828299 ACAAAAATCGTTCAAGGTGAGAA 57.172 34.783 0.00 0.00 0.00 2.87
1536 2347 7.504924 TCTGATAACAAAAATCGTTCAAGGT 57.495 32.000 0.00 0.00 0.00 3.50
1537 2348 8.970691 AATCTGATAACAAAAATCGTTCAAGG 57.029 30.769 0.00 0.00 0.00 3.61
1564 2381 9.547279 AACAGGGGACAAATCTAAATCTAAATT 57.453 29.630 0.00 0.00 0.00 1.82
1615 2432 2.420642 GGTAAAGGTGACGAAGAACCC 58.579 52.381 0.00 0.00 38.26 4.11
1666 2483 0.107643 TCAGGACAACGGTTGCATCA 59.892 50.000 20.20 0.00 0.00 3.07
1719 2549 3.560503 CCGTACGTCAACAAATTTGCAT 58.439 40.909 18.12 4.69 0.00 3.96
1804 2634 1.370900 CTGTGCAAGTCAAAGCCGC 60.371 57.895 0.00 0.00 0.00 6.53
1806 2636 1.662044 CCCTGTGCAAGTCAAAGCC 59.338 57.895 0.00 0.00 0.00 4.35
1833 2663 1.149987 GCAACACAACGAATCGGGTA 58.850 50.000 7.80 0.00 0.00 3.69
1919 2750 1.149148 GCGAGGAACAGACAAGAACC 58.851 55.000 0.00 0.00 0.00 3.62
1928 2759 0.175302 ATCTGAGCTGCGAGGAACAG 59.825 55.000 0.00 0.00 38.22 3.16
1941 2772 3.261580 TGCACCAATACGACAATCTGAG 58.738 45.455 0.00 0.00 0.00 3.35
2010 2846 3.412237 TGCCTTAGGTAGTTGGTTGAC 57.588 47.619 0.00 0.00 0.00 3.18
2053 2896 6.426646 AGACATCCTAATCACCATACTTCC 57.573 41.667 0.00 0.00 0.00 3.46
2071 2981 6.380079 AAGGAAGGTGACAGAATAAGACAT 57.620 37.500 0.00 0.00 0.00 3.06
2118 3031 1.741145 ACGTTTGTTTGCTTCTTCGGT 59.259 42.857 0.00 0.00 0.00 4.69
2120 3033 4.967575 ACATAACGTTTGTTTGCTTCTTCG 59.032 37.500 5.91 0.00 39.54 3.79
2149 3066 7.931948 GCCATTGCTTCCTTCTTACTAGTAATA 59.068 37.037 15.57 6.22 33.53 0.98
2150 3067 6.768381 GCCATTGCTTCCTTCTTACTAGTAAT 59.232 38.462 15.57 0.00 33.53 1.89
2151 3068 6.113411 GCCATTGCTTCCTTCTTACTAGTAA 58.887 40.000 14.52 14.52 33.53 2.24
2154 3071 3.879892 GGCCATTGCTTCCTTCTTACTAG 59.120 47.826 0.00 0.00 37.74 2.57
2193 3119 1.533756 CGAACCGCCTGCCATTAATTG 60.534 52.381 0.00 0.00 0.00 2.32
2267 3200 6.651225 TGTCCAAACAAAAACTACCCAAAAAG 59.349 34.615 0.00 0.00 30.70 2.27
2315 3248 1.081892 ATTGACTGACAGATGCACGC 58.918 50.000 10.08 0.00 0.00 5.34
2357 3290 8.301002 GCATACTTGGTTGATGGTTTAAGTTAA 58.699 33.333 0.00 0.00 31.55 2.01
2412 3350 9.387123 GAAGAAGCTTAAAAATAGTTGTGACTG 57.613 33.333 0.00 0.00 36.60 3.51
2414 3352 9.387123 CTGAAGAAGCTTAAAAATAGTTGTGAC 57.613 33.333 0.00 0.00 0.00 3.67
2454 3392 8.447833 GCTGCACAATTTGTACAGTACTTTATA 58.552 33.333 23.98 0.00 42.32 0.98
2455 3393 7.040755 TGCTGCACAATTTGTACAGTACTTTAT 60.041 33.333 23.98 0.51 42.32 1.40
2456 3394 6.261158 TGCTGCACAATTTGTACAGTACTTTA 59.739 34.615 23.98 7.71 42.32 1.85
2457 3395 5.067153 TGCTGCACAATTTGTACAGTACTTT 59.933 36.000 23.98 0.00 42.32 2.66
2458 3396 4.578516 TGCTGCACAATTTGTACAGTACTT 59.421 37.500 23.98 0.00 42.32 2.24
2459 3397 4.133820 TGCTGCACAATTTGTACAGTACT 58.866 39.130 23.98 0.00 42.32 2.73
2460 3398 4.481930 TGCTGCACAATTTGTACAGTAC 57.518 40.909 23.98 13.22 42.32 2.73
2509 3447 6.376018 ACAGAAGAAGTAGAGCAGTAACCTAG 59.624 42.308 0.00 0.00 0.00 3.02
2516 3454 3.257127 GGTGACAGAAGAAGTAGAGCAGT 59.743 47.826 0.00 0.00 0.00 4.40
2524 3463 2.103153 TGGGAGGTGACAGAAGAAGT 57.897 50.000 0.00 0.00 0.00 3.01
2526 3465 2.978978 TCAATGGGAGGTGACAGAAGAA 59.021 45.455 0.00 0.00 0.00 2.52
2528 3467 3.641434 ATCAATGGGAGGTGACAGAAG 57.359 47.619 0.00 0.00 0.00 2.85
2559 3498 4.156922 TCGTTTGCTTCTTCTGTTTTTCCA 59.843 37.500 0.00 0.00 0.00 3.53
2587 3529 4.065321 ACTAGATCGATTTCCTGCCAAG 57.935 45.455 0.00 0.00 0.00 3.61
2600 3542 8.084590 ACCTTCAAACAGTTTTAACTAGATCG 57.915 34.615 0.00 0.00 37.08 3.69
2622 3567 1.699730 GCAAAGGGTGTACCAAACCT 58.300 50.000 3.11 0.00 43.89 3.50
2624 3569 1.339929 CAGGCAAAGGGTGTACCAAAC 59.660 52.381 3.11 0.00 43.89 2.93
2630 3575 2.059490 AGGTAACAGGCAAAGGGTGTA 58.941 47.619 0.00 0.00 41.41 2.90
2631 3576 0.850784 AGGTAACAGGCAAAGGGTGT 59.149 50.000 0.00 0.00 41.41 4.16
2632 3577 1.995376 AAGGTAACAGGCAAAGGGTG 58.005 50.000 0.00 0.00 41.41 4.61
2646 3591 5.665812 ACTCATCTATTAGGTGCCAAAGGTA 59.334 40.000 0.00 0.00 0.00 3.08
2647 3592 4.475016 ACTCATCTATTAGGTGCCAAAGGT 59.525 41.667 0.00 0.00 0.00 3.50
2649 3594 7.770897 ACTTAACTCATCTATTAGGTGCCAAAG 59.229 37.037 0.00 3.72 0.00 2.77
2685 3631 4.431378 TCCTAGGACCACACCAATTAAGA 58.569 43.478 7.62 0.00 0.00 2.10
2686 3632 4.837093 TCCTAGGACCACACCAATTAAG 57.163 45.455 7.62 0.00 0.00 1.85
2691 3637 2.257207 CTCTTCCTAGGACCACACCAA 58.743 52.381 12.22 0.00 0.00 3.67
2694 3640 1.939980 ACCTCTTCCTAGGACCACAC 58.060 55.000 12.22 0.00 39.15 3.82
2697 3643 4.415224 ACTTTACCTCTTCCTAGGACCA 57.585 45.455 12.22 0.00 39.15 4.02
2698 3644 4.081031 CCAACTTTACCTCTTCCTAGGACC 60.081 50.000 12.22 0.00 39.15 4.46
2701 3647 4.286291 ACACCAACTTTACCTCTTCCTAGG 59.714 45.833 0.82 0.82 42.82 3.02
2702 3648 5.011738 TCACACCAACTTTACCTCTTCCTAG 59.988 44.000 0.00 0.00 0.00 3.02
2703 3649 4.903049 TCACACCAACTTTACCTCTTCCTA 59.097 41.667 0.00 0.00 0.00 2.94
2704 3650 3.714798 TCACACCAACTTTACCTCTTCCT 59.285 43.478 0.00 0.00 0.00 3.36
2705 3651 4.081322 TCACACCAACTTTACCTCTTCC 57.919 45.455 0.00 0.00 0.00 3.46
2711 3657 6.038936 ACAGTTACAATCACACCAACTTTACC 59.961 38.462 0.00 0.00 0.00 2.85
2713 3659 6.038825 CCACAGTTACAATCACACCAACTTTA 59.961 38.462 0.00 0.00 0.00 1.85
2714 3660 5.163561 CCACAGTTACAATCACACCAACTTT 60.164 40.000 0.00 0.00 0.00 2.66
2719 3665 2.226330 GCCACAGTTACAATCACACCA 58.774 47.619 0.00 0.00 0.00 4.17
2730 3676 4.163268 TGCCATATAAGAGTGCCACAGTTA 59.837 41.667 0.00 0.00 0.00 2.24
2733 3679 3.198409 TGCCATATAAGAGTGCCACAG 57.802 47.619 0.00 0.00 0.00 3.66
2758 3709 5.214417 CGATGAATCAGTCAACAGCAAAAA 58.786 37.500 0.00 0.00 40.50 1.94
2760 3711 3.814842 ACGATGAATCAGTCAACAGCAAA 59.185 39.130 0.00 0.00 40.50 3.68
2763 3714 4.153986 CAAACGATGAATCAGTCAACAGC 58.846 43.478 0.00 0.00 40.50 4.40
2775 3726 9.469807 AACAGCAAAATATTTACAAACGATGAA 57.530 25.926 0.01 0.00 0.00 2.57
2776 3727 8.910666 CAACAGCAAAATATTTACAAACGATGA 58.089 29.630 0.01 0.00 0.00 2.92
2789 3743 7.148188 ACGATTCATCAGTCAACAGCAAAATAT 60.148 33.333 0.00 0.00 0.00 1.28
2810 3764 4.545610 CTGCACACACCATTAAAACGATT 58.454 39.130 0.00 0.00 0.00 3.34
2818 3772 2.884012 CAACTTCCTGCACACACCATTA 59.116 45.455 0.00 0.00 0.00 1.90
2819 3773 1.682854 CAACTTCCTGCACACACCATT 59.317 47.619 0.00 0.00 0.00 3.16
2834 3792 1.202568 GCAGAAAAAGCCCAGCAACTT 60.203 47.619 0.00 0.00 0.00 2.66
2870 3828 4.501915 CCAGTGACAATTTGGTTGATGCTT 60.502 41.667 0.78 0.00 40.37 3.91
2891 3849 4.716287 TCAGATAATGTCACCATCTCACCA 59.284 41.667 0.00 0.00 0.00 4.17
2933 3891 2.537560 GCTCCCGCCATTGATGTCG 61.538 63.158 0.00 0.00 0.00 4.35
2938 3896 2.046023 CACTGCTCCCGCCATTGA 60.046 61.111 0.00 0.00 34.43 2.57
2966 3924 1.148273 GGCGTCATCCATAAGCCCA 59.852 57.895 0.00 0.00 41.81 5.36
2969 3927 2.288666 TCAAAGGCGTCATCCATAAGC 58.711 47.619 0.00 0.00 0.00 3.09
3045 4003 0.391661 ACATCACATCTGCCGTCCAC 60.392 55.000 0.00 0.00 0.00 4.02
3047 4005 0.811616 GGACATCACATCTGCCGTCC 60.812 60.000 0.00 0.00 33.69 4.79
3050 4008 0.176449 TGAGGACATCACATCTGCCG 59.824 55.000 0.00 0.00 31.12 5.69
3065 4023 1.201429 AGCAAGTACCCACCCTGAGG 61.201 60.000 0.00 0.00 40.04 3.86
3086 4044 4.298626 TGCAGGGACTATATGAAGGAAGT 58.701 43.478 0.00 0.00 36.02 3.01
3090 4048 3.584406 TGGATGCAGGGACTATATGAAGG 59.416 47.826 0.00 0.00 36.02 3.46
3131 4093 7.870826 TGCAAAGATATGATAAAATGTACCGG 58.129 34.615 0.00 0.00 0.00 5.28
3132 4094 8.773645 TCTGCAAAGATATGATAAAATGTACCG 58.226 33.333 0.00 0.00 0.00 4.02
3221 4191 2.203337 AGCAACCGCCTTCTGCAA 60.203 55.556 0.00 0.00 41.33 4.08
3295 4265 3.271729 TGCAACAAGTTCACTTACCGAA 58.728 40.909 0.00 0.00 34.28 4.30
3382 4356 4.222145 TCCACTGAAGACACCCTGTAATAC 59.778 45.833 0.00 0.00 0.00 1.89
3462 4436 1.985159 ACAATCCAGTAGTCCTTGCCA 59.015 47.619 0.00 0.00 0.00 4.92
3480 4454 2.350895 CCCCATGAGTTGCGGACA 59.649 61.111 0.00 0.00 0.00 4.02
3585 4559 1.921869 CGCCCTTCTTGGTGGGGTAT 61.922 60.000 0.00 0.00 43.53 2.73
3612 4586 4.299796 GTTGGGGCTGGCTTGGGA 62.300 66.667 0.00 0.00 0.00 4.37
3678 4652 2.328473 CATGAGAAGTTCTCGTCGCAA 58.672 47.619 22.24 7.60 46.25 4.85
3723 4697 1.133915 AGGTTCCTGAAGCCAAACGAA 60.134 47.619 5.52 0.00 39.46 3.85
3729 4703 0.827507 GGCAAAGGTTCCTGAAGCCA 60.828 55.000 18.17 0.00 40.29 4.75
3777 4751 3.951769 ATCCTTGCAGCAGGTGGCC 62.952 63.158 3.49 0.00 46.50 5.36
3798 4772 4.666253 GGTGGGCAGCAGCTGGAA 62.666 66.667 24.13 0.00 41.70 3.53
3930 4907 7.482654 TGAACACTTCAGAAGACATAAACAG 57.517 36.000 17.56 0.00 34.08 3.16
3991 4973 4.456911 ACAAGTCAGTTTGGTCATGCATAG 59.543 41.667 0.00 0.00 32.32 2.23
4043 5026 9.759473 ACAAGTAAAACCTACTATCCACTAGTA 57.241 33.333 0.00 0.00 41.10 1.82
4044 5027 8.661752 ACAAGTAAAACCTACTATCCACTAGT 57.338 34.615 0.00 0.00 43.28 2.57
4045 5028 9.583765 GAACAAGTAAAACCTACTATCCACTAG 57.416 37.037 0.00 0.00 0.00 2.57
4046 5029 9.092338 TGAACAAGTAAAACCTACTATCCACTA 57.908 33.333 0.00 0.00 0.00 2.74
4047 5030 7.970102 TGAACAAGTAAAACCTACTATCCACT 58.030 34.615 0.00 0.00 0.00 4.00
4048 5031 8.788325 ATGAACAAGTAAAACCTACTATCCAC 57.212 34.615 0.00 0.00 0.00 4.02
4049 5032 8.822805 AGATGAACAAGTAAAACCTACTATCCA 58.177 33.333 0.00 0.00 0.00 3.41
4050 5033 9.668497 AAGATGAACAAGTAAAACCTACTATCC 57.332 33.333 0.00 0.00 0.00 2.59
4081 5064 4.521130 TCCGCTATGGCTTTCTACTATG 57.479 45.455 0.00 0.00 37.80 2.23
4082 5065 5.078411 CATCCGCTATGGCTTTCTACTAT 57.922 43.478 0.00 0.00 37.80 2.12
4104 5087 5.066968 TCCAAACAAAAACAAGTCAGTCC 57.933 39.130 0.00 0.00 0.00 3.85
4215 5201 0.542232 ACTCCACCTTAGACACCGCT 60.542 55.000 0.00 0.00 0.00 5.52
4279 5266 5.265477 GTTCAAATTTTGCACAAAGGCTTC 58.735 37.500 0.00 0.00 34.04 3.86
4325 5315 8.267367 GCTAGAATCGTAATACTAAGCAACAAC 58.733 37.037 0.00 0.00 0.00 3.32
4357 5349 3.802948 AGGGGATATATAAAGCGAGCG 57.197 47.619 0.00 0.00 0.00 5.03
4394 5401 1.202770 GGGGGCGAGCTATGTACAATT 60.203 52.381 0.00 0.00 0.00 2.32
4450 5459 4.122776 ACACGATGATCACCAATTAGCTC 58.877 43.478 0.00 0.00 0.00 4.09
4533 5542 3.826157 TCCAGGAAATTCGAACTGCAAAT 59.174 39.130 0.00 0.00 0.00 2.32
4539 5548 3.257624 ACGTACTCCAGGAAATTCGAACT 59.742 43.478 0.00 0.00 0.00 3.01
4546 5555 2.180276 AGCAGACGTACTCCAGGAAAT 58.820 47.619 0.00 0.00 0.00 2.17
4557 5566 4.745125 CAGTTCAGAAAGAAAGCAGACGTA 59.255 41.667 0.00 0.00 38.13 3.57
4560 5569 5.065218 TGTTCAGTTCAGAAAGAAAGCAGAC 59.935 40.000 1.82 0.00 38.13 3.51
4565 5574 8.400947 TCTTCATTGTTCAGTTCAGAAAGAAAG 58.599 33.333 1.82 0.00 38.13 2.62
4617 5626 7.073265 CGGGCAACTTTATTATATAAACGGTG 58.927 38.462 0.00 0.00 0.00 4.94
4624 5701 3.368539 CGCGCGGGCAACTTTATTATATA 59.631 43.478 24.84 0.00 39.92 0.86
4640 5717 4.817063 CTCCATTGCAACGCGCGG 62.817 66.667 35.22 18.64 46.97 6.46
4641 5718 4.817063 CCTCCATTGCAACGCGCG 62.817 66.667 30.96 30.96 46.97 6.86
4642 5719 2.976840 TTCCTCCATTGCAACGCGC 61.977 57.895 5.73 0.00 42.89 6.86
4644 5721 0.527565 ATGTTCCTCCATTGCAACGC 59.472 50.000 0.00 0.00 0.00 4.84
4645 5722 4.816385 ACTATATGTTCCTCCATTGCAACG 59.184 41.667 0.00 0.00 0.00 4.10
4647 5724 8.052748 ACTAAACTATATGTTCCTCCATTGCAA 58.947 33.333 0.00 0.00 38.03 4.08
4648 5725 7.573710 ACTAAACTATATGTTCCTCCATTGCA 58.426 34.615 0.00 0.00 38.03 4.08
4650 5727 9.396022 ACAACTAAACTATATGTTCCTCCATTG 57.604 33.333 0.00 0.00 38.03 2.82
4651 5728 9.975218 AACAACTAAACTATATGTTCCTCCATT 57.025 29.630 0.00 0.00 38.03 3.16
4652 5729 9.614792 GAACAACTAAACTATATGTTCCTCCAT 57.385 33.333 5.82 0.00 42.38 3.41
4653 5730 8.598916 TGAACAACTAAACTATATGTTCCTCCA 58.401 33.333 12.72 0.00 45.71 3.86
4656 5733 9.787435 TGTTGAACAACTAAACTATATGTTCCT 57.213 29.630 16.70 0.00 45.71 3.36
4667 5744 6.535508 AGACACTCTCTGTTGAACAACTAAAC 59.464 38.462 16.70 0.00 41.67 2.01
4678 5755 7.424803 CAAGGATATCTAGACACTCTCTGTTG 58.575 42.308 2.05 0.00 31.03 3.33
4679 5756 6.040391 GCAAGGATATCTAGACACTCTCTGTT 59.960 42.308 2.05 0.00 31.03 3.16
4681 5758 5.534278 TGCAAGGATATCTAGACACTCTCTG 59.466 44.000 2.05 0.00 0.00 3.35
4683 5760 6.588719 ATGCAAGGATATCTAGACACTCTC 57.411 41.667 2.05 0.00 0.00 3.20
4684 5761 8.663209 AATATGCAAGGATATCTAGACACTCT 57.337 34.615 2.05 0.00 0.00 3.24
4685 5762 9.149225 CAAATATGCAAGGATATCTAGACACTC 57.851 37.037 2.05 0.00 0.00 3.51
4686 5763 8.654997 ACAAATATGCAAGGATATCTAGACACT 58.345 33.333 2.05 0.00 0.00 3.55
4688 5765 9.494271 GAACAAATATGCAAGGATATCTAGACA 57.506 33.333 2.05 0.00 0.00 3.41
4693 5770 9.139734 ACAATGAACAAATATGCAAGGATATCT 57.860 29.630 2.05 0.00 0.00 1.98
4694 5771 9.403110 GACAATGAACAAATATGCAAGGATATC 57.597 33.333 0.00 0.00 0.00 1.63
4695 5772 8.077991 CGACAATGAACAAATATGCAAGGATAT 58.922 33.333 0.00 0.00 0.00 1.63
4696 5773 7.281999 TCGACAATGAACAAATATGCAAGGATA 59.718 33.333 0.00 0.00 0.00 2.59
4697 5774 6.095300 TCGACAATGAACAAATATGCAAGGAT 59.905 34.615 0.00 0.00 0.00 3.24
4698 5775 5.414144 TCGACAATGAACAAATATGCAAGGA 59.586 36.000 0.00 0.00 0.00 3.36
4699 5776 5.639757 TCGACAATGAACAAATATGCAAGG 58.360 37.500 0.00 0.00 0.00 3.61
4700 5777 7.745022 AATCGACAATGAACAAATATGCAAG 57.255 32.000 0.00 0.00 0.00 4.01
4701 5778 8.531622 AAAATCGACAATGAACAAATATGCAA 57.468 26.923 0.00 0.00 0.00 4.08
4702 5779 8.531622 AAAAATCGACAATGAACAAATATGCA 57.468 26.923 0.00 0.00 0.00 3.96
4728 5805 9.449719 GGAGGAAGAAGAGTGATTTAATTGTTA 57.550 33.333 0.00 0.00 0.00 2.41
4730 5807 7.694093 AGGAGGAAGAAGAGTGATTTAATTGT 58.306 34.615 0.00 0.00 0.00 2.71
4731 5808 8.046107 AGAGGAGGAAGAAGAGTGATTTAATTG 58.954 37.037 0.00 0.00 0.00 2.32
4733 5810 7.747809 AGAGGAGGAAGAAGAGTGATTTAAT 57.252 36.000 0.00 0.00 0.00 1.40
4735 5812 6.726299 TGAAGAGGAGGAAGAAGAGTGATTTA 59.274 38.462 0.00 0.00 0.00 1.40
4736 5813 5.545723 TGAAGAGGAGGAAGAAGAGTGATTT 59.454 40.000 0.00 0.00 0.00 2.17
4737 5814 5.090139 TGAAGAGGAGGAAGAAGAGTGATT 58.910 41.667 0.00 0.00 0.00 2.57
4738 5815 4.682563 TGAAGAGGAGGAAGAAGAGTGAT 58.317 43.478 0.00 0.00 0.00 3.06
4739 5816 4.119556 TGAAGAGGAGGAAGAAGAGTGA 57.880 45.455 0.00 0.00 0.00 3.41
4740 5817 4.562552 GGTTGAAGAGGAGGAAGAAGAGTG 60.563 50.000 0.00 0.00 0.00 3.51
4741 5818 3.580895 GGTTGAAGAGGAGGAAGAAGAGT 59.419 47.826 0.00 0.00 0.00 3.24
4742 5819 3.580458 TGGTTGAAGAGGAGGAAGAAGAG 59.420 47.826 0.00 0.00 0.00 2.85
4743 5820 3.587498 TGGTTGAAGAGGAGGAAGAAGA 58.413 45.455 0.00 0.00 0.00 2.87
4744 5821 4.566426 ATGGTTGAAGAGGAGGAAGAAG 57.434 45.455 0.00 0.00 0.00 2.85
4745 5822 5.571658 GCTTATGGTTGAAGAGGAGGAAGAA 60.572 44.000 0.00 0.00 0.00 2.52
4746 5823 4.080863 GCTTATGGTTGAAGAGGAGGAAGA 60.081 45.833 0.00 0.00 0.00 2.87
4747 5824 4.080638 AGCTTATGGTTGAAGAGGAGGAAG 60.081 45.833 0.00 0.00 0.00 3.46
4748 5825 3.846588 AGCTTATGGTTGAAGAGGAGGAA 59.153 43.478 0.00 0.00 0.00 3.36
4749 5826 3.452627 GAGCTTATGGTTGAAGAGGAGGA 59.547 47.826 0.00 0.00 0.00 3.71
4750 5827 3.454082 AGAGCTTATGGTTGAAGAGGAGG 59.546 47.826 0.00 0.00 0.00 4.30
4751 5828 4.405358 AGAGAGCTTATGGTTGAAGAGGAG 59.595 45.833 0.00 0.00 0.00 3.69
4785 5862 2.157738 GGATGGAGAGTTGCATATGGC 58.842 52.381 4.56 0.00 45.13 4.40
4786 5863 3.327172 AGAGGATGGAGAGTTGCATATGG 59.673 47.826 4.56 0.00 35.28 2.74
4787 5864 4.620589 AGAGGATGGAGAGTTGCATATG 57.379 45.455 0.00 0.00 35.28 1.78
4788 5865 4.657504 TGAAGAGGATGGAGAGTTGCATAT 59.342 41.667 0.00 0.00 35.28 1.78
4789 5866 4.033009 TGAAGAGGATGGAGAGTTGCATA 58.967 43.478 0.00 0.00 35.28 3.14
4790 5867 2.842496 TGAAGAGGATGGAGAGTTGCAT 59.158 45.455 0.00 0.00 38.16 3.96
4791 5868 2.259917 TGAAGAGGATGGAGAGTTGCA 58.740 47.619 0.00 0.00 0.00 4.08
4792 5869 3.340814 TTGAAGAGGATGGAGAGTTGC 57.659 47.619 0.00 0.00 0.00 4.17
4793 5870 5.494724 TGAATTGAAGAGGATGGAGAGTTG 58.505 41.667 0.00 0.00 0.00 3.16
4794 5871 5.768980 TGAATTGAAGAGGATGGAGAGTT 57.231 39.130 0.00 0.00 0.00 3.01
4795 5872 5.768980 TTGAATTGAAGAGGATGGAGAGT 57.231 39.130 0.00 0.00 0.00 3.24
4796 5873 7.458409 TTTTTGAATTGAAGAGGATGGAGAG 57.542 36.000 0.00 0.00 0.00 3.20
4797 5874 9.532494 TTATTTTTGAATTGAAGAGGATGGAGA 57.468 29.630 0.00 0.00 0.00 3.71
4846 5923 3.512329 ACCGACAACCAGGAAAACTTTTT 59.488 39.130 0.00 0.00 0.00 1.94
4847 5924 3.093814 ACCGACAACCAGGAAAACTTTT 58.906 40.909 0.00 0.00 0.00 2.27
4848 5925 2.730382 ACCGACAACCAGGAAAACTTT 58.270 42.857 0.00 0.00 0.00 2.66
4849 5926 2.430248 ACCGACAACCAGGAAAACTT 57.570 45.000 0.00 0.00 0.00 2.66
4850 5927 2.430248 AACCGACAACCAGGAAAACT 57.570 45.000 0.00 0.00 0.00 2.66
4851 5928 2.424246 TGAAACCGACAACCAGGAAAAC 59.576 45.455 0.00 0.00 0.00 2.43
4852 5929 2.685897 CTGAAACCGACAACCAGGAAAA 59.314 45.455 0.00 0.00 0.00 2.29
4853 5930 2.092861 TCTGAAACCGACAACCAGGAAA 60.093 45.455 0.00 0.00 0.00 3.13
4854 5931 1.487142 TCTGAAACCGACAACCAGGAA 59.513 47.619 0.00 0.00 0.00 3.36
4855 5932 1.124780 TCTGAAACCGACAACCAGGA 58.875 50.000 0.00 0.00 0.00 3.86
4856 5933 1.806542 CATCTGAAACCGACAACCAGG 59.193 52.381 0.00 0.00 0.00 4.45
4857 5934 2.766313 TCATCTGAAACCGACAACCAG 58.234 47.619 0.00 0.00 0.00 4.00
4858 5935 2.920724 TCATCTGAAACCGACAACCA 57.079 45.000 0.00 0.00 0.00 3.67
4859 5936 3.751175 TCAATCATCTGAAACCGACAACC 59.249 43.478 0.00 0.00 0.00 3.77
4860 5937 5.551760 ATCAATCATCTGAAACCGACAAC 57.448 39.130 0.00 0.00 0.00 3.32
4861 5938 6.573664 AAATCAATCATCTGAAACCGACAA 57.426 33.333 0.00 0.00 0.00 3.18
4862 5939 6.573664 AAAATCAATCATCTGAAACCGACA 57.426 33.333 0.00 0.00 0.00 4.35
4884 5961 1.408969 GCAGGGGGTTCACTGAAAAA 58.591 50.000 0.00 0.00 36.86 1.94
4885 5962 0.821711 CGCAGGGGGTTCACTGAAAA 60.822 55.000 0.00 0.00 36.86 2.29
4886 5963 1.228124 CGCAGGGGGTTCACTGAAA 60.228 57.895 0.00 0.00 36.86 2.69
4887 5964 2.429930 CGCAGGGGGTTCACTGAA 59.570 61.111 0.00 0.00 36.86 3.02
4888 5965 4.329545 GCGCAGGGGGTTCACTGA 62.330 66.667 0.30 0.00 36.86 3.41
4889 5966 4.335647 AGCGCAGGGGGTTCACTG 62.336 66.667 11.47 0.00 37.76 3.66
4890 5967 4.021925 GAGCGCAGGGGGTTCACT 62.022 66.667 11.47 0.00 0.00 3.41
4891 5968 3.959991 GAGAGCGCAGGGGGTTCAC 62.960 68.421 11.47 0.00 0.00 3.18
4892 5969 3.706373 GAGAGCGCAGGGGGTTCA 61.706 66.667 11.47 0.00 0.00 3.18
4893 5970 2.470938 AAAGAGAGCGCAGGGGGTTC 62.471 60.000 11.47 0.00 0.00 3.62
4894 5971 2.529744 AAAGAGAGCGCAGGGGGTT 61.530 57.895 11.47 0.00 0.00 4.11
4895 5972 2.930562 AAAGAGAGCGCAGGGGGT 60.931 61.111 11.47 0.00 0.00 4.95
4896 5973 2.437359 CAAAGAGAGCGCAGGGGG 60.437 66.667 11.47 0.00 0.00 5.40
4897 5974 3.130160 GCAAAGAGAGCGCAGGGG 61.130 66.667 11.47 0.00 0.00 4.79
4898 5975 3.130160 GGCAAAGAGAGCGCAGGG 61.130 66.667 11.47 0.00 0.00 4.45
4899 5976 2.835701 TACGGCAAAGAGAGCGCAGG 62.836 60.000 11.47 0.00 0.00 4.85
4900 5977 0.807667 ATACGGCAAAGAGAGCGCAG 60.808 55.000 11.47 0.00 0.00 5.18
4901 5978 0.806102 GATACGGCAAAGAGAGCGCA 60.806 55.000 11.47 0.00 0.00 6.09
4902 5979 1.491505 GGATACGGCAAAGAGAGCGC 61.492 60.000 0.00 0.00 0.00 5.92
4903 5980 0.876342 GGGATACGGCAAAGAGAGCG 60.876 60.000 0.00 0.00 37.60 5.03
4904 5981 0.466124 AGGGATACGGCAAAGAGAGC 59.534 55.000 0.00 0.00 37.60 4.09
4905 5982 2.093447 ACAAGGGATACGGCAAAGAGAG 60.093 50.000 0.00 0.00 37.60 3.20
4906 5983 1.906574 ACAAGGGATACGGCAAAGAGA 59.093 47.619 0.00 0.00 37.60 3.10
4907 5984 2.280628 GACAAGGGATACGGCAAAGAG 58.719 52.381 0.00 0.00 37.60 2.85
4908 5985 1.404986 CGACAAGGGATACGGCAAAGA 60.405 52.381 0.00 0.00 37.60 2.52
4909 5986 1.006832 CGACAAGGGATACGGCAAAG 58.993 55.000 0.00 0.00 37.60 2.77
4910 5987 1.022451 GCGACAAGGGATACGGCAAA 61.022 55.000 0.00 0.00 37.60 3.68
4911 5988 1.448893 GCGACAAGGGATACGGCAA 60.449 57.895 0.00 0.00 37.60 4.52
4912 5989 2.185867 GCGACAAGGGATACGGCA 59.814 61.111 0.00 0.00 37.60 5.69
4913 5990 2.588034 GGCGACAAGGGATACGGC 60.588 66.667 0.00 0.00 42.98 5.68
4914 5991 0.529992 GAAGGCGACAAGGGATACGG 60.530 60.000 0.00 0.00 37.60 4.02
4915 5992 0.174845 TGAAGGCGACAAGGGATACG 59.825 55.000 0.00 0.00 37.60 3.06
4916 5993 2.213499 CATGAAGGCGACAAGGGATAC 58.787 52.381 0.00 0.00 0.00 2.24
4917 5994 1.837439 ACATGAAGGCGACAAGGGATA 59.163 47.619 0.00 0.00 0.00 2.59
4918 5995 0.620556 ACATGAAGGCGACAAGGGAT 59.379 50.000 0.00 0.00 0.00 3.85
4919 5996 0.036388 GACATGAAGGCGACAAGGGA 60.036 55.000 0.00 0.00 0.00 4.20
4920 5997 0.321564 TGACATGAAGGCGACAAGGG 60.322 55.000 0.00 0.00 0.00 3.95
4921 5998 1.197721 GTTGACATGAAGGCGACAAGG 59.802 52.381 0.00 0.00 39.69 3.61
4922 5999 1.197721 GGTTGACATGAAGGCGACAAG 59.802 52.381 0.00 0.00 41.95 3.16
4923 6000 1.202758 AGGTTGACATGAAGGCGACAA 60.203 47.619 0.00 0.00 41.95 3.18
4924 6001 0.396435 AGGTTGACATGAAGGCGACA 59.604 50.000 0.00 0.00 41.95 4.35
4925 6002 1.079503 GAGGTTGACATGAAGGCGAC 58.920 55.000 0.00 0.00 39.12 5.19
4926 6003 0.684535 TGAGGTTGACATGAAGGCGA 59.315 50.000 0.00 0.00 0.00 5.54
4927 6004 1.667724 GATGAGGTTGACATGAAGGCG 59.332 52.381 0.00 0.00 0.00 5.52
4928 6005 2.421424 GTGATGAGGTTGACATGAAGGC 59.579 50.000 0.00 0.00 0.00 4.35
4929 6006 3.012518 GGTGATGAGGTTGACATGAAGG 58.987 50.000 0.00 0.00 0.00 3.46
4930 6007 2.674852 CGGTGATGAGGTTGACATGAAG 59.325 50.000 0.00 0.00 0.00 3.02
4931 6008 2.698803 CGGTGATGAGGTTGACATGAA 58.301 47.619 0.00 0.00 0.00 2.57
4932 6009 1.675714 GCGGTGATGAGGTTGACATGA 60.676 52.381 0.00 0.00 0.00 3.07
4933 6010 0.729116 GCGGTGATGAGGTTGACATG 59.271 55.000 0.00 0.00 0.00 3.21
4934 6011 0.392998 GGCGGTGATGAGGTTGACAT 60.393 55.000 0.00 0.00 0.00 3.06
4935 6012 1.003839 GGCGGTGATGAGGTTGACA 60.004 57.895 0.00 0.00 0.00 3.58
4936 6013 2.100631 CGGCGGTGATGAGGTTGAC 61.101 63.158 0.00 0.00 0.00 3.18
4937 6014 2.264480 CGGCGGTGATGAGGTTGA 59.736 61.111 0.00 0.00 0.00 3.18
4938 6015 3.499737 GCGGCGGTGATGAGGTTG 61.500 66.667 9.78 0.00 0.00 3.77
4939 6016 4.778143 GGCGGCGGTGATGAGGTT 62.778 66.667 9.78 0.00 0.00 3.50
4941 6018 4.473520 AAGGCGGCGGTGATGAGG 62.474 66.667 9.78 0.00 0.00 3.86
4942 6019 3.197790 CAAGGCGGCGGTGATGAG 61.198 66.667 9.78 0.00 0.00 2.90
4943 6020 4.776322 CCAAGGCGGCGGTGATGA 62.776 66.667 9.78 0.00 0.00 2.92
4951 6028 3.134127 GATGGACACCAAGGCGGC 61.134 66.667 0.00 0.00 36.95 6.53
4952 6029 0.251916 TAAGATGGACACCAAGGCGG 59.748 55.000 0.00 0.00 36.95 6.13
4953 6030 1.369625 GTAAGATGGACACCAAGGCG 58.630 55.000 0.00 0.00 36.95 5.52
4954 6031 1.282157 AGGTAAGATGGACACCAAGGC 59.718 52.381 0.00 0.00 36.95 4.35
4955 6032 3.610911 GAAGGTAAGATGGACACCAAGG 58.389 50.000 0.00 0.00 36.95 3.61
4956 6033 3.262420 CGAAGGTAAGATGGACACCAAG 58.738 50.000 0.00 0.00 36.95 3.61
4957 6034 3.328382 CGAAGGTAAGATGGACACCAA 57.672 47.619 0.00 0.00 36.95 3.67
4973 6050 0.859232 GTGCCGTATATGTGCCGAAG 59.141 55.000 0.00 0.00 0.00 3.79
4974 6051 0.175989 TGTGCCGTATATGTGCCGAA 59.824 50.000 0.00 0.00 0.00 4.30
4975 6052 0.528901 GTGTGCCGTATATGTGCCGA 60.529 55.000 0.00 0.00 0.00 5.54
4976 6053 0.808060 TGTGTGCCGTATATGTGCCG 60.808 55.000 3.80 0.00 0.00 5.69
4977 6054 1.374560 TTGTGTGCCGTATATGTGCC 58.625 50.000 3.80 0.00 0.00 5.01
4978 6055 2.418628 ACTTTGTGTGCCGTATATGTGC 59.581 45.455 0.00 0.00 0.00 4.57
4979 6056 5.106442 TCTACTTTGTGTGCCGTATATGTG 58.894 41.667 0.00 0.00 0.00 3.21
4980 6057 5.333299 TCTACTTTGTGTGCCGTATATGT 57.667 39.130 0.00 0.00 0.00 2.29
4981 6058 5.579119 TGTTCTACTTTGTGTGCCGTATATG 59.421 40.000 0.00 0.00 0.00 1.78
4982 6059 5.726397 TGTTCTACTTTGTGTGCCGTATAT 58.274 37.500 0.00 0.00 0.00 0.86
4983 6060 5.136816 TGTTCTACTTTGTGTGCCGTATA 57.863 39.130 0.00 0.00 0.00 1.47
4984 6061 3.997762 TGTTCTACTTTGTGTGCCGTAT 58.002 40.909 0.00 0.00 0.00 3.06
4985 6062 3.455990 TGTTCTACTTTGTGTGCCGTA 57.544 42.857 0.00 0.00 0.00 4.02
4986 6063 2.319136 TGTTCTACTTTGTGTGCCGT 57.681 45.000 0.00 0.00 0.00 5.68
4987 6064 2.159627 GGATGTTCTACTTTGTGTGCCG 59.840 50.000 0.00 0.00 0.00 5.69
4988 6065 2.159627 CGGATGTTCTACTTTGTGTGCC 59.840 50.000 0.00 0.00 0.00 5.01
4989 6066 3.064207 TCGGATGTTCTACTTTGTGTGC 58.936 45.455 0.00 0.00 0.00 4.57
4990 6067 5.666969 TTTCGGATGTTCTACTTTGTGTG 57.333 39.130 0.00 0.00 0.00 3.82
4991 6068 6.485313 TGAATTTCGGATGTTCTACTTTGTGT 59.515 34.615 5.03 0.00 0.00 3.72
4992 6069 6.898041 TGAATTTCGGATGTTCTACTTTGTG 58.102 36.000 5.03 0.00 0.00 3.33
4993 6070 7.504924 TTGAATTTCGGATGTTCTACTTTGT 57.495 32.000 5.03 0.00 0.00 2.83
5000 6077 8.739039 TCACAAATATTGAATTTCGGATGTTCT 58.261 29.630 0.00 0.00 0.00 3.01
5001 6078 8.798153 GTCACAAATATTGAATTTCGGATGTTC 58.202 33.333 0.00 0.00 0.00 3.18
5002 6079 8.303156 TGTCACAAATATTGAATTTCGGATGTT 58.697 29.630 0.00 0.00 0.00 2.71
5003 6080 7.825681 TGTCACAAATATTGAATTTCGGATGT 58.174 30.769 0.00 0.00 0.00 3.06
5004 6081 8.861033 ATGTCACAAATATTGAATTTCGGATG 57.139 30.769 0.00 0.00 0.00 3.51
5007 6084 9.106286 CGATATGTCACAAATATTGAATTTCGG 57.894 33.333 0.00 0.00 0.00 4.30
5008 6085 8.621487 GCGATATGTCACAAATATTGAATTTCG 58.379 33.333 0.00 0.00 0.00 3.46
5009 6086 9.669353 AGCGATATGTCACAAATATTGAATTTC 57.331 29.630 0.00 0.00 0.00 2.17
5010 6087 9.669353 GAGCGATATGTCACAAATATTGAATTT 57.331 29.630 0.00 0.00 0.00 1.82
5011 6088 9.060347 AGAGCGATATGTCACAAATATTGAATT 57.940 29.630 0.00 0.00 0.00 2.17
5012 6089 8.613060 AGAGCGATATGTCACAAATATTGAAT 57.387 30.769 0.00 0.00 0.00 2.57
5013 6090 8.437360 AAGAGCGATATGTCACAAATATTGAA 57.563 30.769 0.00 0.00 0.00 2.69
5014 6091 9.710900 ATAAGAGCGATATGTCACAAATATTGA 57.289 29.630 0.00 0.00 0.00 2.57
5017 6094 9.587772 GGTATAAGAGCGATATGTCACAAATAT 57.412 33.333 0.00 0.00 0.00 1.28
5018 6095 8.581578 TGGTATAAGAGCGATATGTCACAAATA 58.418 33.333 0.00 0.00 0.00 1.40
5019 6096 7.441836 TGGTATAAGAGCGATATGTCACAAAT 58.558 34.615 0.00 0.00 0.00 2.32
5020 6097 6.811954 TGGTATAAGAGCGATATGTCACAAA 58.188 36.000 0.00 0.00 0.00 2.83
5021 6098 6.399639 TGGTATAAGAGCGATATGTCACAA 57.600 37.500 0.00 0.00 0.00 3.33
5022 6099 6.399639 TTGGTATAAGAGCGATATGTCACA 57.600 37.500 0.00 0.00 0.00 3.58
5023 6100 8.981724 TTATTGGTATAAGAGCGATATGTCAC 57.018 34.615 0.00 0.00 32.94 3.67
5024 6101 9.990360 TTTTATTGGTATAAGAGCGATATGTCA 57.010 29.630 0.00 0.00 32.94 3.58
5048 6125 9.546428 CTGGTGGATTAATTTCAGTTTCTTTTT 57.454 29.630 0.00 0.00 0.00 1.94
5049 6126 8.923270 TCTGGTGGATTAATTTCAGTTTCTTTT 58.077 29.630 0.00 0.00 0.00 2.27
5050 6127 8.477419 TCTGGTGGATTAATTTCAGTTTCTTT 57.523 30.769 0.00 0.00 0.00 2.52
5051 6128 8.477419 TTCTGGTGGATTAATTTCAGTTTCTT 57.523 30.769 0.00 0.00 0.00 2.52
5052 6129 8.655935 ATTCTGGTGGATTAATTTCAGTTTCT 57.344 30.769 0.00 0.00 0.00 2.52
5055 6132 9.753674 TCTTATTCTGGTGGATTAATTTCAGTT 57.246 29.630 0.00 0.00 0.00 3.16
5056 6133 9.401058 CTCTTATTCTGGTGGATTAATTTCAGT 57.599 33.333 0.00 0.00 0.00 3.41
5057 6134 9.401058 ACTCTTATTCTGGTGGATTAATTTCAG 57.599 33.333 0.00 0.00 0.00 3.02
5058 6135 9.396022 GACTCTTATTCTGGTGGATTAATTTCA 57.604 33.333 0.00 0.00 0.00 2.69
5059 6136 8.552034 CGACTCTTATTCTGGTGGATTAATTTC 58.448 37.037 0.00 0.00 0.00 2.17
5060 6137 7.499232 CCGACTCTTATTCTGGTGGATTAATTT 59.501 37.037 0.00 0.00 0.00 1.82
5061 6138 6.992715 CCGACTCTTATTCTGGTGGATTAATT 59.007 38.462 0.00 0.00 0.00 1.40
5062 6139 6.099845 ACCGACTCTTATTCTGGTGGATTAAT 59.900 38.462 0.00 0.00 0.00 1.40
5063 6140 5.424252 ACCGACTCTTATTCTGGTGGATTAA 59.576 40.000 0.00 0.00 0.00 1.40
5064 6141 4.960469 ACCGACTCTTATTCTGGTGGATTA 59.040 41.667 0.00 0.00 0.00 1.75
5065 6142 3.775316 ACCGACTCTTATTCTGGTGGATT 59.225 43.478 0.00 0.00 0.00 3.01
5066 6143 3.133003 CACCGACTCTTATTCTGGTGGAT 59.867 47.826 1.32 0.00 42.38 3.41
5067 6144 2.496070 CACCGACTCTTATTCTGGTGGA 59.504 50.000 1.32 0.00 42.38 4.02
5068 6145 2.893637 CACCGACTCTTATTCTGGTGG 58.106 52.381 1.32 0.00 42.38 4.61
5070 6147 2.353803 GCACACCGACTCTTATTCTGGT 60.354 50.000 0.00 0.00 0.00 4.00
5071 6148 2.271800 GCACACCGACTCTTATTCTGG 58.728 52.381 0.00 0.00 0.00 3.86
5072 6149 2.271800 GGCACACCGACTCTTATTCTG 58.728 52.381 0.00 0.00 0.00 3.02
5073 6150 1.207329 GGGCACACCGACTCTTATTCT 59.793 52.381 0.00 0.00 36.48 2.40
5074 6151 1.653151 GGGCACACCGACTCTTATTC 58.347 55.000 0.00 0.00 36.48 1.75
5075 6152 0.252197 GGGGCACACCGACTCTTATT 59.748 55.000 0.00 0.00 41.60 1.40
5076 6153 0.907704 TGGGGCACACCGACTCTTAT 60.908 55.000 0.00 0.00 41.60 1.73
5077 6154 1.534476 TGGGGCACACCGACTCTTA 60.534 57.895 0.00 0.00 41.60 2.10
5078 6155 2.847234 TGGGGCACACCGACTCTT 60.847 61.111 0.00 0.00 41.60 2.85
5079 6156 3.626924 GTGGGGCACACCGACTCT 61.627 66.667 9.22 0.00 43.93 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.