Multiple sequence alignment - TraesCS2D01G540500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G540500 chr2D 100.000 2690 0 0 1 2690 620223020 620225709 0.000000e+00 4968.0
1 TraesCS2D01G540500 chr2D 84.244 1098 79 29 689 1757 620269952 620270984 0.000000e+00 983.0
2 TraesCS2D01G540500 chr2D 79.279 1636 147 91 638 2165 620281062 620282613 0.000000e+00 966.0
3 TraesCS2D01G540500 chr2D 80.789 380 47 23 1327 1693 620295994 620296360 9.490000e-70 274.0
4 TraesCS2D01G540500 chr2D 87.558 217 26 1 422 638 385040818 385041033 1.600000e-62 250.0
5 TraesCS2D01G540500 chr2D 90.217 184 17 1 2424 2607 322764442 322764624 3.460000e-59 239.0
6 TraesCS2D01G540500 chr2D 89.011 182 20 0 2426 2607 260407976 260407795 2.690000e-55 226.0
7 TraesCS2D01G540500 chr2D 86.979 192 22 3 2424 2614 114232108 114231919 2.100000e-51 213.0
8 TraesCS2D01G540500 chr2D 83.871 186 26 2 2169 2351 8983434 8983618 9.900000e-40 174.0
9 TraesCS2D01G540500 chr2D 76.408 373 54 26 1326 1690 620448050 620448396 1.280000e-38 171.0
10 TraesCS2D01G540500 chr2D 100.000 85 0 0 1 85 620269026 620269110 9.970000e-35 158.0
11 TraesCS2D01G540500 chr2D 95.455 88 4 0 2603 2690 112870942 112871029 1.000000e-29 141.0
12 TraesCS2D01G540500 chr2B 88.547 1170 77 21 661 1783 760015389 760016548 0.000000e+00 1365.0
13 TraesCS2D01G540500 chr2B 79.252 1364 126 85 635 1930 760152847 760154121 0.000000e+00 806.0
14 TraesCS2D01G540500 chr2B 83.696 920 69 41 659 1553 760118351 760119214 0.000000e+00 793.0
15 TraesCS2D01G540500 chr2B 87.597 516 43 11 1930 2427 760016656 760017168 1.800000e-161 579.0
16 TraesCS2D01G540500 chr2B 87.500 368 31 8 1 365 760115527 760115882 6.930000e-111 411.0
17 TraesCS2D01G540500 chr2B 86.555 238 22 5 1935 2165 760154160 760154394 1.240000e-63 254.0
18 TraesCS2D01G540500 chr2B 79.221 385 53 23 1327 1693 760264196 760264571 2.680000e-60 243.0
19 TraesCS2D01G540500 chr2B 77.919 394 35 24 1549 1920 760119249 760119612 5.870000e-47 198.0
20 TraesCS2D01G540500 chr2B 93.617 94 4 2 2599 2690 206287193 206287100 3.610000e-29 139.0
21 TraesCS2D01G540500 chr2B 97.531 81 2 0 2610 2690 548017555 548017635 3.610000e-29 139.0
22 TraesCS2D01G540500 chr2B 100.000 34 0 0 1 34 760150775 760150808 2.240000e-06 63.9
23 TraesCS2D01G540500 chr2A 84.615 1261 87 50 732 1930 751844671 751845886 0.000000e+00 1155.0
24 TraesCS2D01G540500 chr2A 88.100 916 66 17 661 1560 751893703 751892815 0.000000e+00 1048.0
25 TraesCS2D01G540500 chr2A 79.172 1594 166 85 662 2165 752031000 752032517 0.000000e+00 952.0
26 TraesCS2D01G540500 chr2A 90.042 472 38 5 1962 2424 751762426 751762897 1.070000e-168 603.0
27 TraesCS2D01G540500 chr2A 83.824 680 50 28 1249 1890 751757314 751757971 2.310000e-165 592.0
28 TraesCS2D01G540500 chr2A 84.858 317 17 11 1 299 751909811 751909508 9.420000e-75 291.0
29 TraesCS2D01G540500 chr2A 85.656 244 22 3 1523 1757 751892822 751892583 7.440000e-61 244.0
30 TraesCS2D01G540500 chr2A 86.977 215 17 8 4 215 751756858 751757064 5.790000e-57 231.0
31 TraesCS2D01G540500 chr2A 78.877 374 44 21 1327 1693 752048532 752048877 1.250000e-53 220.0
32 TraesCS2D01G540500 chr2A 85.849 212 14 9 1721 1928 751776114 751776313 7.550000e-51 211.0
33 TraesCS2D01G540500 chr2A 82.915 199 30 4 2159 2355 8042572 8042376 2.750000e-40 176.0
34 TraesCS2D01G540500 chr2A 86.719 128 9 1 1 120 751844299 751844426 4.670000e-28 135.0
35 TraesCS2D01G540500 chr2A 86.466 133 4 6 1921 2039 751845906 751846038 1.680000e-27 134.0
36 TraesCS2D01G540500 chr2A 90.196 102 5 2 1090 1191 751757277 751757181 7.820000e-26 128.0
37 TraesCS2D01G540500 chr2A 100.000 34 0 0 1933 1966 751776345 751776378 2.240000e-06 63.9
38 TraesCS2D01G540500 chr2A 96.970 33 1 0 2 34 752027992 752028024 3.740000e-04 56.5
39 TraesCS2D01G540500 chr1D 89.048 210 23 0 429 638 463979230 463979021 7.390000e-66 261.0
40 TraesCS2D01G540500 chr1D 97.531 81 2 0 2610 2690 76970951 76971031 3.610000e-29 139.0
41 TraesCS2D01G540500 chr1D 97.531 81 2 0 2610 2690 365804559 365804639 3.610000e-29 139.0
42 TraesCS2D01G540500 chr6D 86.522 230 31 0 409 638 403572997 403572768 1.240000e-63 254.0
43 TraesCS2D01G540500 chr6D 87.113 194 19 6 2427 2618 405276522 405276333 5.830000e-52 215.0
44 TraesCS2D01G540500 chr4B 88.517 209 23 1 434 642 378856570 378856363 4.450000e-63 252.0
45 TraesCS2D01G540500 chr7A 88.152 211 23 2 429 638 503433244 503433035 1.600000e-62 250.0
46 TraesCS2D01G540500 chr7A 87.558 217 26 1 422 638 614529688 614529903 1.600000e-62 250.0
47 TraesCS2D01G540500 chr5B 86.404 228 31 0 409 636 393294506 393294733 1.600000e-62 250.0
48 TraesCS2D01G540500 chr5B 86.979 192 22 3 2424 2614 282784998 282784809 2.100000e-51 213.0
49 TraesCS2D01G540500 chr6A 85.897 234 32 1 406 638 315819567 315819800 5.750000e-62 248.0
50 TraesCS2D01G540500 chr6A 96.471 85 3 0 2606 2690 588443019 588443103 1.000000e-29 141.0
51 TraesCS2D01G540500 chr4D 85.408 233 33 1 406 638 25900334 25900565 9.620000e-60 241.0
52 TraesCS2D01G540500 chr4D 87.500 192 21 3 2424 2614 397847683 397847872 4.510000e-53 219.0
53 TraesCS2D01G540500 chr4D 84.239 184 23 4 2173 2353 112721998 112721818 9.900000e-40 174.0
54 TraesCS2D01G540500 chr7D 91.379 174 13 2 2424 2596 265530316 265530488 1.240000e-58 237.0
55 TraesCS2D01G540500 chr3D 88.021 192 20 3 2424 2614 184774366 184774177 9.690000e-55 224.0
56 TraesCS2D01G540500 chr3D 84.783 184 25 2 2173 2353 30359854 30360037 5.920000e-42 182.0
57 TraesCS2D01G540500 chr3D 92.473 93 7 0 2598 2690 476728107 476728199 1.680000e-27 134.0
58 TraesCS2D01G540500 chr3B 88.360 189 19 3 2427 2614 588490275 588490089 9.690000e-55 224.0
59 TraesCS2D01G540500 chr3B 82.447 188 27 6 2168 2354 555269756 555269574 2.770000e-35 159.0
60 TraesCS2D01G540500 chr1A 85.326 184 24 2 2173 2354 571579087 571578905 1.270000e-43 187.0
61 TraesCS2D01G540500 chr1B 84.615 182 26 1 2173 2352 642605905 642605724 2.130000e-41 180.0
62 TraesCS2D01G540500 chr5D 84.530 181 25 2 2173 2350 462454620 462454800 2.750000e-40 176.0
63 TraesCS2D01G540500 chr6B 82.967 182 29 2 2174 2353 610952654 610952835 2.140000e-36 163.0
64 TraesCS2D01G540500 chr5A 97.561 82 2 0 2609 2690 400576266 400576347 1.000000e-29 141.0
65 TraesCS2D01G540500 chr7B 97.531 81 2 0 2610 2690 627876481 627876401 3.610000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G540500 chr2D 620223020 620225709 2689 False 4968.000000 4968 100.000000 1 2690 1 chr2D.!!$F5 2689
1 TraesCS2D01G540500 chr2D 620281062 620282613 1551 False 966.000000 966 79.279000 638 2165 1 chr2D.!!$F6 1527
2 TraesCS2D01G540500 chr2D 620269026 620270984 1958 False 570.500000 983 92.122000 1 1757 2 chr2D.!!$F9 1756
3 TraesCS2D01G540500 chr2B 760015389 760017168 1779 False 972.000000 1365 88.072000 661 2427 2 chr2B.!!$F3 1766
4 TraesCS2D01G540500 chr2B 760115527 760119612 4085 False 467.333333 793 83.038333 1 1920 3 chr2B.!!$F4 1919
5 TraesCS2D01G540500 chr2B 760150775 760154394 3619 False 374.633333 806 88.602333 1 2165 3 chr2B.!!$F5 2164
6 TraesCS2D01G540500 chr2A 751892583 751893703 1120 True 646.000000 1048 86.878000 661 1757 2 chr2A.!!$R4 1096
7 TraesCS2D01G540500 chr2A 752027992 752032517 4525 False 504.250000 952 88.071000 2 2165 2 chr2A.!!$F6 2163
8 TraesCS2D01G540500 chr2A 751844299 751846038 1739 False 474.666667 1155 85.933333 1 2039 3 chr2A.!!$F5 2038
9 TraesCS2D01G540500 chr2A 751756858 751757971 1113 False 411.500000 592 85.400500 4 1890 2 chr2A.!!$F3 1886

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
306 799 0.100325 CGCACTGAGCCACAACAAAA 59.9 50.0 0.0 0.0 41.38 2.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1881 9430 1.000163 AGCTATCGATGCAACCGGTAG 60.0 52.381 20.94 20.94 42.01 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
272 765 1.943116 AAGCACAAGCAACCAACGCA 61.943 50.000 0.00 0.00 45.49 5.24
282 775 4.760047 CCAACGCAGGACCCCTCG 62.760 72.222 0.00 0.00 33.06 4.63
292 785 2.600769 ACCCCTCGAGAACGCACT 60.601 61.111 15.71 0.00 39.58 4.40
301 794 0.880278 GAGAACGCACTGAGCCACAA 60.880 55.000 0.00 0.00 41.38 3.33
302 795 1.160329 AGAACGCACTGAGCCACAAC 61.160 55.000 0.00 0.00 41.38 3.32
306 799 0.100325 CGCACTGAGCCACAACAAAA 59.900 50.000 0.00 0.00 41.38 2.44
365 4754 4.836825 AGTAGTAGTAGTACGTCTTGCCA 58.163 43.478 9.09 0.00 33.97 4.92
366 4755 5.248640 AGTAGTAGTAGTACGTCTTGCCAA 58.751 41.667 9.09 0.00 33.97 4.52
367 4756 5.707298 AGTAGTAGTAGTACGTCTTGCCAAA 59.293 40.000 9.09 0.00 33.97 3.28
368 4757 5.458041 AGTAGTAGTACGTCTTGCCAAAA 57.542 39.130 0.00 0.00 33.97 2.44
369 4758 5.467705 AGTAGTAGTACGTCTTGCCAAAAG 58.532 41.667 0.00 0.00 33.97 2.27
370 4759 4.595762 AGTAGTACGTCTTGCCAAAAGA 57.404 40.909 0.00 0.00 0.00 2.52
371 4760 4.952460 AGTAGTACGTCTTGCCAAAAGAA 58.048 39.130 0.00 0.00 0.00 2.52
372 4761 5.362263 AGTAGTACGTCTTGCCAAAAGAAA 58.638 37.500 0.00 0.00 0.00 2.52
379 4768 4.287720 GTCTTGCCAAAAGAAAAGTACGG 58.712 43.478 0.00 0.00 0.00 4.02
380 4769 2.785713 TGCCAAAAGAAAAGTACGGC 57.214 45.000 0.00 0.00 38.56 5.68
385 4774 2.681152 AAAGAAAAGTACGGCTTGCG 57.319 45.000 0.00 0.00 37.52 4.85
397 4786 3.058160 CTTGCGGCACCCCTCAAG 61.058 66.667 0.05 0.00 44.75 3.02
400 4789 2.747855 GCGGCACCCCTCAAGAAG 60.748 66.667 0.00 0.00 0.00 2.85
404 7152 1.248486 GGCACCCCTCAAGAAGAAAC 58.752 55.000 0.00 0.00 0.00 2.78
409 7157 2.302157 ACCCCTCAAGAAGAAACTACGG 59.698 50.000 0.00 0.00 0.00 4.02
412 7167 2.028020 CCTCAAGAAGAAACTACGGGCT 60.028 50.000 0.00 0.00 0.00 5.19
422 7177 3.703286 AACTACGGGCTGTTTGTTTTC 57.297 42.857 3.31 0.00 0.00 2.29
424 7179 4.075963 ACTACGGGCTGTTTGTTTTCTA 57.924 40.909 3.31 0.00 0.00 2.10
427 7182 1.606668 CGGGCTGTTTGTTTTCTAGCA 59.393 47.619 0.00 0.00 36.15 3.49
428 7183 2.034053 CGGGCTGTTTGTTTTCTAGCAA 59.966 45.455 0.00 0.00 36.15 3.91
430 7185 3.181480 GGGCTGTTTGTTTTCTAGCAACA 60.181 43.478 3.81 3.81 36.15 3.33
431 7186 3.796717 GGCTGTTTGTTTTCTAGCAACAC 59.203 43.478 6.78 0.00 33.81 3.32
432 7187 4.440112 GGCTGTTTGTTTTCTAGCAACACT 60.440 41.667 6.78 0.00 33.81 3.55
433 7188 5.102313 GCTGTTTGTTTTCTAGCAACACTT 58.898 37.500 6.78 0.00 33.81 3.16
434 7189 5.576774 GCTGTTTGTTTTCTAGCAACACTTT 59.423 36.000 6.78 0.00 33.81 2.66
435 7190 6.454186 GCTGTTTGTTTTCTAGCAACACTTTG 60.454 38.462 6.78 1.83 33.81 2.77
446 7201 3.354089 CAACACTTTGCCACACCTTAG 57.646 47.619 0.00 0.00 0.00 2.18
447 7202 1.981256 ACACTTTGCCACACCTTAGG 58.019 50.000 0.00 0.00 0.00 2.69
448 7203 1.214424 ACACTTTGCCACACCTTAGGT 59.786 47.619 0.00 0.00 35.62 3.08
449 7204 2.306847 CACTTTGCCACACCTTAGGTT 58.693 47.619 0.00 0.00 31.02 3.50
450 7205 3.117813 ACACTTTGCCACACCTTAGGTTA 60.118 43.478 0.00 0.00 31.02 2.85
451 7206 3.502211 CACTTTGCCACACCTTAGGTTAG 59.498 47.826 0.00 0.00 31.02 2.34
452 7207 3.393278 ACTTTGCCACACCTTAGGTTAGA 59.607 43.478 0.00 0.00 31.02 2.10
453 7208 3.412237 TTGCCACACCTTAGGTTAGAC 57.588 47.619 0.00 0.00 31.02 2.59
454 7209 2.331166 TGCCACACCTTAGGTTAGACA 58.669 47.619 0.00 0.00 31.02 3.41
455 7210 2.706723 TGCCACACCTTAGGTTAGACAA 59.293 45.455 0.00 0.00 31.02 3.18
457 7212 3.244457 GCCACACCTTAGGTTAGACAAGT 60.244 47.826 0.00 0.00 31.02 3.16
461 7216 6.993902 CCACACCTTAGGTTAGACAAGTTTAA 59.006 38.462 0.00 0.00 31.02 1.52
462 7217 7.664318 CCACACCTTAGGTTAGACAAGTTTAAT 59.336 37.037 0.00 0.00 31.02 1.40
466 7221 9.503399 ACCTTAGGTTAGACAAGTTTAATCAAG 57.497 33.333 0.00 0.43 27.29 3.02
467 7222 9.503399 CCTTAGGTTAGACAAGTTTAATCAAGT 57.497 33.333 0.00 0.00 0.00 3.16
471 7226 9.503399 AGGTTAGACAAGTTTAATCAAGTTAGG 57.497 33.333 0.00 0.00 0.00 2.69
477 7233 8.983702 ACAAGTTTAATCAAGTTAGGTGGTTA 57.016 30.769 0.00 0.00 0.00 2.85
485 7241 6.887626 TCAAGTTAGGTGGTTATTTGGTTC 57.112 37.500 0.00 0.00 0.00 3.62
487 7243 7.747690 TCAAGTTAGGTGGTTATTTGGTTCTA 58.252 34.615 0.00 0.00 0.00 2.10
488 7244 8.219178 TCAAGTTAGGTGGTTATTTGGTTCTAA 58.781 33.333 0.00 0.00 0.00 2.10
489 7245 7.991084 AGTTAGGTGGTTATTTGGTTCTAAC 57.009 36.000 0.00 0.00 36.98 2.34
505 7261 5.925509 GTTCTAACCATACCTAAGGCATGA 58.074 41.667 0.00 0.00 0.00 3.07
506 7262 6.354130 GTTCTAACCATACCTAAGGCATGAA 58.646 40.000 0.00 0.00 0.00 2.57
507 7263 6.763715 TCTAACCATACCTAAGGCATGAAT 57.236 37.500 0.00 0.00 0.00 2.57
508 7264 7.865530 TCTAACCATACCTAAGGCATGAATA 57.134 36.000 0.00 0.00 0.00 1.75
509 7265 8.449423 TCTAACCATACCTAAGGCATGAATAT 57.551 34.615 0.00 0.00 0.00 1.28
510 7266 8.890472 TCTAACCATACCTAAGGCATGAATATT 58.110 33.333 0.00 0.00 0.00 1.28
511 7267 9.520515 CTAACCATACCTAAGGCATGAATATTT 57.479 33.333 0.00 0.00 0.00 1.40
514 7270 9.875708 ACCATACCTAAGGCATGAATATTTTTA 57.124 29.630 0.00 0.00 0.00 1.52
519 7275 9.646522 ACCTAAGGCATGAATATTTTTATGAGT 57.353 29.630 0.00 0.00 32.10 3.41
535 7291 8.862325 TTTTATGAGTAATGAACCTCACATGT 57.138 30.769 0.00 0.00 0.00 3.21
536 7292 8.492673 TTTATGAGTAATGAACCTCACATGTC 57.507 34.615 0.00 0.00 0.00 3.06
537 7293 5.482163 TGAGTAATGAACCTCACATGTCA 57.518 39.130 0.00 0.00 0.00 3.58
538 7294 6.053632 TGAGTAATGAACCTCACATGTCAT 57.946 37.500 0.00 0.00 0.00 3.06
539 7295 7.181569 TGAGTAATGAACCTCACATGTCATA 57.818 36.000 0.00 0.00 0.00 2.15
540 7296 7.267857 TGAGTAATGAACCTCACATGTCATAG 58.732 38.462 0.00 0.00 0.00 2.23
541 7297 7.124147 TGAGTAATGAACCTCACATGTCATAGA 59.876 37.037 0.00 0.00 0.00 1.98
542 7298 7.268586 AGTAATGAACCTCACATGTCATAGAC 58.731 38.462 0.00 0.00 0.00 2.59
543 7299 5.682234 ATGAACCTCACATGTCATAGACA 57.318 39.130 0.00 1.95 46.90 3.41
556 7312 6.435430 TGTCATAGACATAAAATGTGTGGC 57.565 37.500 0.00 0.00 45.03 5.01
557 7313 5.942826 TGTCATAGACATAAAATGTGTGGCA 59.057 36.000 0.00 0.00 45.03 4.92
558 7314 6.432472 TGTCATAGACATAAAATGTGTGGCAA 59.568 34.615 0.00 0.00 45.03 4.52
559 7315 6.968904 GTCATAGACATAAAATGTGTGGCAAG 59.031 38.462 0.00 0.00 45.03 4.01
560 7316 6.883756 TCATAGACATAAAATGTGTGGCAAGA 59.116 34.615 0.00 0.00 45.03 3.02
561 7317 7.557358 TCATAGACATAAAATGTGTGGCAAGAT 59.443 33.333 0.00 0.00 45.03 2.40
562 7318 6.594788 AGACATAAAATGTGTGGCAAGATT 57.405 33.333 0.00 0.00 45.03 2.40
563 7319 6.624423 AGACATAAAATGTGTGGCAAGATTC 58.376 36.000 0.00 0.00 45.03 2.52
564 7320 6.435277 AGACATAAAATGTGTGGCAAGATTCT 59.565 34.615 0.00 0.00 45.03 2.40
565 7321 6.996509 ACATAAAATGTGTGGCAAGATTCTT 58.003 32.000 0.00 0.00 43.01 2.52
566 7322 7.444299 ACATAAAATGTGTGGCAAGATTCTTT 58.556 30.769 0.00 0.00 43.01 2.52
567 7323 7.933033 ACATAAAATGTGTGGCAAGATTCTTTT 59.067 29.630 0.00 0.00 43.01 2.27
568 7324 9.421806 CATAAAATGTGTGGCAAGATTCTTTTA 57.578 29.630 0.00 0.00 0.00 1.52
569 7325 7.951530 AAAATGTGTGGCAAGATTCTTTTAG 57.048 32.000 0.00 0.00 0.00 1.85
570 7326 5.649782 ATGTGTGGCAAGATTCTTTTAGG 57.350 39.130 0.00 0.00 0.00 2.69
571 7327 3.255642 TGTGTGGCAAGATTCTTTTAGGC 59.744 43.478 0.00 0.00 0.00 3.93
572 7328 3.255642 GTGTGGCAAGATTCTTTTAGGCA 59.744 43.478 7.21 7.21 0.00 4.75
573 7329 3.894427 TGTGGCAAGATTCTTTTAGGCAA 59.106 39.130 11.47 0.00 33.29 4.52
574 7330 4.022068 TGTGGCAAGATTCTTTTAGGCAAG 60.022 41.667 11.47 0.00 33.29 4.01
575 7331 3.056607 TGGCAAGATTCTTTTAGGCAAGC 60.057 43.478 8.46 1.94 0.00 4.01
576 7332 3.515630 GCAAGATTCTTTTAGGCAAGCC 58.484 45.455 2.02 2.02 0.00 4.35
577 7333 3.056607 GCAAGATTCTTTTAGGCAAGCCA 60.057 43.478 14.40 0.00 38.92 4.75
578 7334 4.561326 GCAAGATTCTTTTAGGCAAGCCAA 60.561 41.667 14.40 3.01 38.92 4.52
579 7335 5.540911 CAAGATTCTTTTAGGCAAGCCAAA 58.459 37.500 14.40 8.92 38.92 3.28
580 7336 5.806654 AGATTCTTTTAGGCAAGCCAAAA 57.193 34.783 14.40 15.11 38.92 2.44
581 7337 6.364568 AGATTCTTTTAGGCAAGCCAAAAT 57.635 33.333 14.40 3.53 38.92 1.82
582 7338 7.480760 AGATTCTTTTAGGCAAGCCAAAATA 57.519 32.000 14.40 7.94 38.92 1.40
583 7339 8.082672 AGATTCTTTTAGGCAAGCCAAAATAT 57.917 30.769 14.40 12.44 38.92 1.28
584 7340 7.983484 AGATTCTTTTAGGCAAGCCAAAATATG 59.017 33.333 14.40 6.90 38.92 1.78
585 7341 6.849085 TCTTTTAGGCAAGCCAAAATATGA 57.151 33.333 14.40 8.73 38.92 2.15
586 7342 6.630071 TCTTTTAGGCAAGCCAAAATATGAC 58.370 36.000 14.40 0.00 38.92 3.06
587 7343 6.437162 TCTTTTAGGCAAGCCAAAATATGACT 59.563 34.615 14.40 0.00 38.92 3.41
588 7344 7.613801 TCTTTTAGGCAAGCCAAAATATGACTA 59.386 33.333 14.40 0.00 38.92 2.59
589 7345 7.710676 TTTAGGCAAGCCAAAATATGACTAA 57.289 32.000 14.40 0.00 40.64 2.24
590 7346 5.582689 AGGCAAGCCAAAATATGACTAAC 57.417 39.130 14.40 0.00 38.92 2.34
591 7347 5.016173 AGGCAAGCCAAAATATGACTAACA 58.984 37.500 14.40 0.00 38.92 2.41
592 7348 5.480073 AGGCAAGCCAAAATATGACTAACAA 59.520 36.000 14.40 0.00 38.92 2.83
593 7349 6.155049 AGGCAAGCCAAAATATGACTAACAAT 59.845 34.615 14.40 0.00 38.92 2.71
594 7350 6.818142 GGCAAGCCAAAATATGACTAACAATT 59.182 34.615 6.14 0.00 35.81 2.32
595 7351 7.334171 GGCAAGCCAAAATATGACTAACAATTT 59.666 33.333 6.14 0.00 35.81 1.82
596 7352 8.170553 GCAAGCCAAAATATGACTAACAATTTG 58.829 33.333 0.00 0.00 34.01 2.32
597 7353 9.421806 CAAGCCAAAATATGACTAACAATTTGA 57.578 29.630 2.79 0.00 35.07 2.69
598 7354 9.643693 AAGCCAAAATATGACTAACAATTTGAG 57.356 29.630 2.79 0.00 35.07 3.02
599 7355 7.761249 AGCCAAAATATGACTAACAATTTGAGC 59.239 33.333 2.79 0.00 35.07 4.26
600 7356 7.545265 GCCAAAATATGACTAACAATTTGAGCA 59.455 33.333 2.79 0.00 35.07 4.26
601 7357 9.421806 CCAAAATATGACTAACAATTTGAGCAA 57.578 29.630 2.79 0.00 35.07 3.91
604 7360 9.846248 AAATATGACTAACAATTTGAGCAACTC 57.154 29.630 2.79 0.00 0.00 3.01
605 7361 6.882610 ATGACTAACAATTTGAGCAACTCA 57.117 33.333 2.79 0.00 38.87 3.41
606 7362 6.691754 TGACTAACAATTTGAGCAACTCAA 57.308 33.333 5.94 5.94 46.93 3.02
614 7370 2.928801 TGAGCAACTCAAGTTAGGCA 57.071 45.000 7.64 0.00 37.57 4.75
615 7371 3.207265 TGAGCAACTCAAGTTAGGCAA 57.793 42.857 7.64 0.00 37.57 4.52
616 7372 3.754965 TGAGCAACTCAAGTTAGGCAAT 58.245 40.909 7.64 0.00 37.57 3.56
617 7373 4.144297 TGAGCAACTCAAGTTAGGCAATT 58.856 39.130 7.64 0.00 37.57 2.32
618 7374 4.022935 TGAGCAACTCAAGTTAGGCAATTG 60.023 41.667 0.00 0.00 37.57 2.32
619 7375 3.891366 AGCAACTCAAGTTAGGCAATTGT 59.109 39.130 7.40 0.00 36.32 2.71
620 7376 3.983344 GCAACTCAAGTTAGGCAATTGTG 59.017 43.478 7.40 0.00 36.32 3.33
621 7377 4.549458 CAACTCAAGTTAGGCAATTGTGG 58.451 43.478 7.40 0.00 36.32 4.17
622 7378 5.087964 CAACTCAAGTTAGGCAATTGTGGC 61.088 45.833 7.40 0.00 42.59 5.01
623 7379 7.459593 CAACTCAAGTTAGGCAATTGTGGCA 62.460 44.000 7.40 0.00 43.75 4.92
624 7380 8.834122 CAACTCAAGTTAGGCAATTGTGGCAA 62.834 42.308 7.40 0.00 43.75 4.52
655 7411 1.816224 GCATAATCCACCGGTGTTTGT 59.184 47.619 31.80 19.80 0.00 2.83
656 7412 2.159435 GCATAATCCACCGGTGTTTGTC 60.159 50.000 31.80 14.18 0.00 3.18
657 7413 2.188062 TAATCCACCGGTGTTTGTCC 57.812 50.000 31.80 0.00 0.00 4.02
658 7414 0.183971 AATCCACCGGTGTTTGTCCA 59.816 50.000 31.80 7.90 0.00 4.02
659 7415 0.404040 ATCCACCGGTGTTTGTCCAT 59.596 50.000 31.80 9.78 0.00 3.41
660 7416 0.250553 TCCACCGGTGTTTGTCCATC 60.251 55.000 31.80 0.00 0.00 3.51
669 7447 1.303236 TTTGTCCATCGCCAGTGGG 60.303 57.895 12.15 0.89 37.34 4.61
782 8115 1.408266 CGCCTATAAAACCAGTGGCCT 60.408 52.381 9.78 0.00 37.29 5.19
812 8168 0.464373 CTTGCCGCCCAGATACACAT 60.464 55.000 0.00 0.00 0.00 3.21
833 8189 1.497278 CATTTGTCCGTCGCCAGTG 59.503 57.895 0.00 0.00 0.00 3.66
834 8190 0.948623 CATTTGTCCGTCGCCAGTGA 60.949 55.000 0.00 0.00 0.00 3.41
840 8196 2.279851 CGTCGCCAGTGACCACAA 60.280 61.111 5.80 0.00 35.40 3.33
843 8199 0.736053 GTCGCCAGTGACCACAAAAA 59.264 50.000 2.78 0.00 32.61 1.94
844 8200 1.336755 GTCGCCAGTGACCACAAAAAT 59.663 47.619 2.78 0.00 32.61 1.82
849 8205 3.005684 GCCAGTGACCACAAAAATCATCA 59.994 43.478 2.78 0.00 0.00 3.07
853 8212 4.648762 AGTGACCACAAAAATCATCACCAA 59.351 37.500 2.78 0.00 37.72 3.67
933 8306 3.423154 CGCCTTGTCCCGTTGCTC 61.423 66.667 0.00 0.00 0.00 4.26
1096 8496 0.251033 TGCTTGCTCTGGTTGCTGAT 60.251 50.000 0.00 0.00 0.00 2.90
1242 8659 0.608640 TTCCTCCTTCCGTCTTGCTC 59.391 55.000 0.00 0.00 0.00 4.26
1246 8663 2.096248 CTCCTTCCGTCTTGCTCTAGT 58.904 52.381 0.00 0.00 0.00 2.57
1271 8688 3.610791 CTCTGCTTCGTCGCACGGA 62.611 63.158 8.46 0.00 42.81 4.69
1306 8726 2.379005 GAATTGAAGGCCGGAATCCTT 58.621 47.619 5.05 8.96 45.98 3.36
1494 8933 3.835395 AGAAGAAGGACGACAAGAAGGAT 59.165 43.478 0.00 0.00 0.00 3.24
1533 9026 0.737715 CCGCCGGAGACAAGAAAGAG 60.738 60.000 5.05 0.00 0.00 2.85
1614 9110 4.501714 CCCTACGGCTACGCGCAA 62.502 66.667 5.73 0.00 46.04 4.85
1700 9214 4.498520 CTGCTGATCGGCGTCGGT 62.499 66.667 21.30 0.00 36.95 4.69
1725 9250 1.380380 CCCTGCCCCTTGGACATTC 60.380 63.158 0.00 0.00 0.00 2.67
1754 9283 3.073735 CGCCTGTCCTCCTCTGCT 61.074 66.667 0.00 0.00 0.00 4.24
1755 9284 2.583520 GCCTGTCCTCCTCTGCTG 59.416 66.667 0.00 0.00 0.00 4.41
1756 9285 2.583520 CCTGTCCTCCTCTGCTGC 59.416 66.667 0.00 0.00 0.00 5.25
1783 9318 2.656646 CGCTGCCAGTGGACAGTA 59.343 61.111 25.04 3.74 36.26 2.74
1784 9319 1.738099 CGCTGCCAGTGGACAGTAC 60.738 63.158 25.04 14.19 36.26 2.73
1797 9335 3.389983 TGGACAGTACTTGGTAGTTGCTT 59.610 43.478 0.00 0.00 35.78 3.91
1802 9340 5.989777 ACAGTACTTGGTAGTTGCTTTACTG 59.010 40.000 0.00 0.00 38.53 2.74
1825 9363 4.451150 CCTACCTGCCGCAGCGAA 62.451 66.667 18.75 2.77 44.31 4.70
1826 9364 2.887568 CTACCTGCCGCAGCGAAG 60.888 66.667 18.75 13.34 44.31 3.79
1853 9391 3.542742 GACGGCGAGCGTTACAGC 61.543 66.667 16.62 0.00 37.41 4.40
1969 9561 3.838120 TCATCAGTTTGTAGAGTGCGAG 58.162 45.455 0.00 0.00 0.00 5.03
1972 9576 4.316205 TCAGTTTGTAGAGTGCGAGAAA 57.684 40.909 0.00 0.00 0.00 2.52
2046 9654 3.314357 GCGACCCAACTGAAAAGTACTTT 59.686 43.478 15.22 15.22 0.00 2.66
2098 9726 8.092687 AGTGTAAATCAGTACTAAAACCATCGT 58.907 33.333 0.00 0.00 0.00 3.73
2099 9727 8.378421 GTGTAAATCAGTACTAAAACCATCGTC 58.622 37.037 0.00 0.00 0.00 4.20
2140 9768 3.003480 ACTTAAATTCGGCTCAGCTGAC 58.997 45.455 13.74 9.94 44.15 3.51
2144 9772 0.610174 ATTCGGCTCAGCTGACTCAA 59.390 50.000 13.74 3.73 44.15 3.02
2179 9807 0.237235 GATTGCGAAACGGTCTTGCA 59.763 50.000 0.00 0.00 0.00 4.08
2197 9825 5.264610 CTTGCAAAGTCTCAGTCGACTGAA 61.265 45.833 39.25 28.85 44.80 3.02
2213 9841 6.143438 GTCGACTGAAAATTAACGAAGTCTCA 59.857 38.462 8.70 0.00 45.00 3.27
2217 9845 6.144080 ACTGAAAATTAACGAAGTCTCAGTCG 59.856 38.462 0.00 0.00 45.00 4.18
2229 9858 4.657013 AGTCTCAGTCGATGCTATATCCA 58.343 43.478 0.00 0.00 0.00 3.41
2230 9859 4.457603 AGTCTCAGTCGATGCTATATCCAC 59.542 45.833 0.00 0.00 0.00 4.02
2249 9878 6.471233 TCCACGAGATCTTACATTGAGATT 57.529 37.500 0.00 0.00 34.13 2.40
2251 9880 6.096846 TCCACGAGATCTTACATTGAGATTCA 59.903 38.462 0.00 0.00 34.13 2.57
2256 9885 9.636879 CGAGATCTTACATTGAGATTCATGTAT 57.363 33.333 0.00 0.00 34.13 2.29
2309 9940 5.247507 TGTATGTTATGGCACTTGATTGC 57.752 39.130 0.00 0.00 42.18 3.56
2311 9942 1.135431 TGTTATGGCACTTGATTGCGC 60.135 47.619 0.00 0.00 44.00 6.09
2328 9959 2.017049 GCGCCATGGTTAAATCTCAGT 58.983 47.619 14.67 0.00 0.00 3.41
2330 9961 2.285220 CGCCATGGTTAAATCTCAGTCG 59.715 50.000 14.67 0.00 0.00 4.18
2369 10000 0.771756 CATTGCGAAACTGTTGTGCG 59.228 50.000 11.17 8.81 0.00 5.34
2387 10018 0.434628 CGGCGATGTATACATGCACG 59.565 55.000 22.93 19.39 36.57 5.34
2388 10019 1.778334 GGCGATGTATACATGCACGA 58.222 50.000 22.93 0.00 36.57 4.35
2389 10020 1.455786 GGCGATGTATACATGCACGAC 59.544 52.381 22.93 17.70 36.57 4.34
2409 10040 0.886563 GGCTGCATGATGGCTAATCC 59.113 55.000 0.50 0.00 34.00 3.01
2427 10058 0.041663 CCAACCGTATTTATGCGCCG 60.042 55.000 4.18 0.00 34.50 6.46
2428 10059 0.041663 CAACCGTATTTATGCGCCGG 60.042 55.000 15.88 15.88 44.06 6.13
2429 10060 1.161563 AACCGTATTTATGCGCCGGG 61.162 55.000 20.32 6.33 42.81 5.73
2430 10061 1.595929 CCGTATTTATGCGCCGGGT 60.596 57.895 4.18 0.00 35.11 5.28
2431 10062 1.562575 CCGTATTTATGCGCCGGGTC 61.563 60.000 4.18 0.00 35.11 4.46
2432 10063 0.599204 CGTATTTATGCGCCGGGTCT 60.599 55.000 4.18 0.00 0.00 3.85
2433 10064 1.145803 GTATTTATGCGCCGGGTCTC 58.854 55.000 4.18 0.00 0.00 3.36
2434 10065 0.753867 TATTTATGCGCCGGGTCTCA 59.246 50.000 4.18 0.00 0.00 3.27
2435 10066 0.814010 ATTTATGCGCCGGGTCTCAC 60.814 55.000 4.18 0.00 0.00 3.51
2436 10067 2.862674 TTTATGCGCCGGGTCTCACC 62.863 60.000 4.18 0.00 37.60 4.02
2439 10070 4.699522 GCGCCGGGTCTCACCTTT 62.700 66.667 2.18 0.00 38.64 3.11
2440 10071 2.975536 CGCCGGGTCTCACCTTTA 59.024 61.111 2.18 0.00 38.64 1.85
2441 10072 1.520666 CGCCGGGTCTCACCTTTAT 59.479 57.895 2.18 0.00 38.64 1.40
2442 10073 0.748450 CGCCGGGTCTCACCTTTATA 59.252 55.000 2.18 0.00 38.64 0.98
2443 10074 1.343465 CGCCGGGTCTCACCTTTATAT 59.657 52.381 2.18 0.00 38.64 0.86
2444 10075 2.559668 CGCCGGGTCTCACCTTTATATA 59.440 50.000 2.18 0.00 38.64 0.86
2445 10076 3.613432 CGCCGGGTCTCACCTTTATATAC 60.613 52.174 2.18 0.00 38.64 1.47
2446 10077 3.322828 GCCGGGTCTCACCTTTATATACA 59.677 47.826 2.18 0.00 38.64 2.29
2447 10078 4.798593 GCCGGGTCTCACCTTTATATACAC 60.799 50.000 2.18 0.00 38.64 2.90
2448 10079 4.342951 CCGGGTCTCACCTTTATATACACA 59.657 45.833 0.00 0.00 38.64 3.72
2449 10080 5.509163 CCGGGTCTCACCTTTATATACACAG 60.509 48.000 0.00 0.00 38.64 3.66
2450 10081 5.509163 CGGGTCTCACCTTTATATACACAGG 60.509 48.000 0.00 1.66 38.64 4.00
2451 10082 5.365895 GGGTCTCACCTTTATATACACAGGT 59.634 44.000 2.70 2.70 40.50 4.00
2452 10083 6.552350 GGGTCTCACCTTTATATACACAGGTA 59.448 42.308 7.00 0.00 37.56 3.08
2453 10084 7.255871 GGGTCTCACCTTTATATACACAGGTAG 60.256 44.444 7.00 6.30 37.56 3.18
2454 10085 7.504911 GGTCTCACCTTTATATACACAGGTAGA 59.495 40.741 7.00 7.81 37.56 2.59
2455 10086 8.569641 GTCTCACCTTTATATACACAGGTAGAG 58.430 40.741 16.78 16.78 37.56 2.43
2456 10087 8.500238 TCTCACCTTTATATACACAGGTAGAGA 58.500 37.037 18.87 18.87 37.56 3.10
2457 10088 8.461249 TCACCTTTATATACACAGGTAGAGAC 57.539 38.462 7.00 0.00 37.56 3.36
2476 10107 1.817209 CCGGAGGCTTACAGAGTCC 59.183 63.158 0.00 0.00 46.14 3.85
2477 10108 1.677637 CCGGAGGCTTACAGAGTCCC 61.678 65.000 0.00 0.00 46.14 4.46
2478 10109 0.684805 CGGAGGCTTACAGAGTCCCT 60.685 60.000 0.00 0.00 0.00 4.20
2480 10111 0.176910 GAGGCTTACAGAGTCCCTGC 59.823 60.000 0.00 0.00 46.81 4.85
2481 10112 1.222113 GGCTTACAGAGTCCCTGCC 59.778 63.158 0.00 0.00 46.81 4.85
2482 10113 1.153549 GCTTACAGAGTCCCTGCCG 60.154 63.158 0.00 0.00 46.81 5.69
2483 10114 1.517832 CTTACAGAGTCCCTGCCGG 59.482 63.158 0.00 0.00 46.81 6.13
2484 10115 2.579684 CTTACAGAGTCCCTGCCGGC 62.580 65.000 22.73 22.73 46.81 6.13
2485 10116 3.602075 TACAGAGTCCCTGCCGGCT 62.602 63.158 29.70 5.42 46.81 5.52
2486 10117 4.154347 CAGAGTCCCTGCCGGCTC 62.154 72.222 29.70 15.82 35.89 4.70
2487 10118 4.704103 AGAGTCCCTGCCGGCTCA 62.704 66.667 29.70 7.24 37.29 4.26
2488 10119 4.459089 GAGTCCCTGCCGGCTCAC 62.459 72.222 29.70 17.73 35.81 3.51
2492 10123 4.641645 CCCTGCCGGCTCACACAA 62.642 66.667 29.70 3.67 0.00 3.33
2493 10124 3.357079 CCTGCCGGCTCACACAAC 61.357 66.667 29.70 0.00 0.00 3.32
2494 10125 3.716006 CTGCCGGCTCACACAACG 61.716 66.667 29.70 0.57 0.00 4.10
2495 10126 4.539083 TGCCGGCTCACACAACGT 62.539 61.111 29.70 0.00 0.00 3.99
2504 10135 2.279918 ACACAACGTGACCGGCTC 60.280 61.111 0.00 0.00 36.96 4.70
2505 10136 3.403057 CACAACGTGACCGGCTCG 61.403 66.667 0.00 10.09 38.78 5.03
2515 10146 2.032071 CCGGCTCGGTTTCCAACT 59.968 61.111 5.56 0.00 42.73 3.16
2516 10147 1.294138 CCGGCTCGGTTTCCAACTA 59.706 57.895 5.56 0.00 42.73 2.24
2517 10148 0.320946 CCGGCTCGGTTTCCAACTAA 60.321 55.000 5.56 0.00 42.73 2.24
2518 10149 1.677820 CCGGCTCGGTTTCCAACTAAT 60.678 52.381 5.56 0.00 42.73 1.73
2519 10150 1.664151 CGGCTCGGTTTCCAACTAATC 59.336 52.381 0.00 0.00 0.00 1.75
2520 10151 2.706890 GGCTCGGTTTCCAACTAATCA 58.293 47.619 0.00 0.00 0.00 2.57
2521 10152 3.279434 GGCTCGGTTTCCAACTAATCAT 58.721 45.455 0.00 0.00 0.00 2.45
2522 10153 3.065371 GGCTCGGTTTCCAACTAATCATG 59.935 47.826 0.00 0.00 0.00 3.07
2523 10154 3.487544 GCTCGGTTTCCAACTAATCATGC 60.488 47.826 0.00 0.00 0.00 4.06
2524 10155 3.013921 TCGGTTTCCAACTAATCATGCC 58.986 45.455 0.00 0.00 0.00 4.40
2525 10156 2.752354 CGGTTTCCAACTAATCATGCCA 59.248 45.455 0.00 0.00 0.00 4.92
2526 10157 3.381272 CGGTTTCCAACTAATCATGCCAT 59.619 43.478 0.00 0.00 0.00 4.40
2527 10158 4.578516 CGGTTTCCAACTAATCATGCCATA 59.421 41.667 0.00 0.00 0.00 2.74
2528 10159 5.505654 CGGTTTCCAACTAATCATGCCATAC 60.506 44.000 0.00 0.00 0.00 2.39
2529 10160 5.359576 GGTTTCCAACTAATCATGCCATACA 59.640 40.000 0.00 0.00 0.00 2.29
2530 10161 6.040842 GGTTTCCAACTAATCATGCCATACAT 59.959 38.462 0.00 0.00 40.66 2.29
2531 10162 7.230510 GGTTTCCAACTAATCATGCCATACATA 59.769 37.037 0.00 0.00 36.64 2.29
2532 10163 7.984422 TTCCAACTAATCATGCCATACATAG 57.016 36.000 0.00 0.00 36.64 2.23
2533 10164 5.939883 TCCAACTAATCATGCCATACATAGC 59.060 40.000 0.00 0.00 36.64 2.97
2534 10165 5.706833 CCAACTAATCATGCCATACATAGCA 59.293 40.000 0.00 0.00 44.45 3.49
2535 10166 6.207221 CCAACTAATCATGCCATACATAGCAA 59.793 38.462 0.00 0.00 43.36 3.91
2536 10167 7.303261 CAACTAATCATGCCATACATAGCAAG 58.697 38.462 0.00 0.00 43.36 4.01
2537 10168 6.537355 ACTAATCATGCCATACATAGCAAGT 58.463 36.000 0.00 0.00 43.36 3.16
2538 10169 5.954296 AATCATGCCATACATAGCAAGTC 57.046 39.130 0.00 0.00 43.36 3.01
2539 10170 4.420522 TCATGCCATACATAGCAAGTCA 57.579 40.909 0.00 0.00 43.36 3.41
2540 10171 4.976864 TCATGCCATACATAGCAAGTCAT 58.023 39.130 0.00 0.00 43.36 3.06
2541 10172 4.999311 TCATGCCATACATAGCAAGTCATC 59.001 41.667 0.00 0.00 43.36 2.92
2542 10173 3.392882 TGCCATACATAGCAAGTCATCG 58.607 45.455 0.00 0.00 35.69 3.84
2543 10174 3.181466 TGCCATACATAGCAAGTCATCGT 60.181 43.478 0.00 0.00 35.69 3.73
2544 10175 4.038642 TGCCATACATAGCAAGTCATCGTA 59.961 41.667 0.00 0.00 35.69 3.43
2545 10176 4.386049 GCCATACATAGCAAGTCATCGTAC 59.614 45.833 0.00 0.00 0.00 3.67
2546 10177 4.617223 CCATACATAGCAAGTCATCGTACG 59.383 45.833 9.53 9.53 0.00 3.67
2547 10178 3.079960 ACATAGCAAGTCATCGTACGG 57.920 47.619 16.52 0.00 0.00 4.02
2548 10179 1.787155 CATAGCAAGTCATCGTACGGC 59.213 52.381 16.52 8.87 0.00 5.68
2549 10180 0.101759 TAGCAAGTCATCGTACGGCC 59.898 55.000 16.52 0.00 0.00 6.13
2550 10181 2.514013 GCAAGTCATCGTACGGCCG 61.514 63.158 26.86 26.86 0.00 6.13
2551 10182 1.138036 CAAGTCATCGTACGGCCGA 59.862 57.895 35.90 13.31 41.73 5.54
2553 10184 0.030369 AAGTCATCGTACGGCCGATC 59.970 55.000 35.90 22.11 45.25 3.69
2554 10185 1.099295 AGTCATCGTACGGCCGATCA 61.099 55.000 35.90 13.94 45.25 2.92
2555 10186 0.039437 GTCATCGTACGGCCGATCAT 60.039 55.000 35.90 12.54 45.25 2.45
2556 10187 1.198408 GTCATCGTACGGCCGATCATA 59.802 52.381 35.90 11.26 45.25 2.15
2557 10188 1.467342 TCATCGTACGGCCGATCATAG 59.533 52.381 35.90 17.13 45.25 2.23
2558 10189 0.809385 ATCGTACGGCCGATCATAGG 59.191 55.000 35.90 18.92 43.74 2.57
2565 10196 2.923035 CCGATCATAGGCCCGGGT 60.923 66.667 24.63 5.39 38.42 5.28
2566 10197 2.657237 CGATCATAGGCCCGGGTC 59.343 66.667 20.43 20.43 0.00 4.46
2567 10198 1.908793 CGATCATAGGCCCGGGTCT 60.909 63.158 33.93 33.93 0.00 3.85
2568 10199 1.472662 CGATCATAGGCCCGGGTCTT 61.473 60.000 36.78 16.55 0.00 3.01
2569 10200 0.035458 GATCATAGGCCCGGGTCTTG 59.965 60.000 36.78 28.49 0.00 3.02
2570 10201 1.418908 ATCATAGGCCCGGGTCTTGG 61.419 60.000 36.78 25.44 0.00 3.61
2576 10207 2.361230 CCCGGGTCTTGGGCTTTC 60.361 66.667 14.18 0.00 40.47 2.62
2577 10208 2.434331 CCGGGTCTTGGGCTTTCA 59.566 61.111 0.00 0.00 0.00 2.69
2578 10209 1.971695 CCGGGTCTTGGGCTTTCAC 60.972 63.158 0.00 0.00 0.00 3.18
2579 10210 1.971695 CGGGTCTTGGGCTTTCACC 60.972 63.158 0.00 0.00 0.00 4.02
2580 10211 1.152830 GGGTCTTGGGCTTTCACCA 59.847 57.895 0.00 0.00 35.88 4.17
2581 10212 0.895559 GGGTCTTGGGCTTTCACCAG 60.896 60.000 0.00 0.00 39.57 4.00
2582 10213 0.895559 GGTCTTGGGCTTTCACCAGG 60.896 60.000 0.00 0.00 39.57 4.45
2583 10214 1.228552 TCTTGGGCTTTCACCAGGC 60.229 57.895 0.00 0.00 39.57 4.85
2587 10218 3.376918 GGCTTTCACCAGGCCTGC 61.377 66.667 28.39 14.05 42.31 4.85
2588 10219 2.282745 GCTTTCACCAGGCCTGCT 60.283 61.111 28.39 11.78 0.00 4.24
2589 10220 2.338785 GCTTTCACCAGGCCTGCTC 61.339 63.158 28.39 6.30 0.00 4.26
2590 10221 1.676967 CTTTCACCAGGCCTGCTCC 60.677 63.158 28.39 0.00 0.00 4.70
2591 10222 2.134630 CTTTCACCAGGCCTGCTCCT 62.135 60.000 28.39 5.92 36.78 3.69
2592 10223 0.840288 TTTCACCAGGCCTGCTCCTA 60.840 55.000 28.39 9.08 33.95 2.94
2593 10224 0.621571 TTCACCAGGCCTGCTCCTAT 60.622 55.000 28.39 4.66 33.95 2.57
2594 10225 1.147824 CACCAGGCCTGCTCCTATG 59.852 63.158 28.39 14.16 33.95 2.23
2595 10226 1.003442 ACCAGGCCTGCTCCTATGA 59.997 57.895 28.39 0.00 33.95 2.15
2596 10227 0.621571 ACCAGGCCTGCTCCTATGAA 60.622 55.000 28.39 0.00 33.95 2.57
2597 10228 0.179034 CCAGGCCTGCTCCTATGAAC 60.179 60.000 28.39 0.00 33.95 3.18
2598 10229 0.179034 CAGGCCTGCTCCTATGAACC 60.179 60.000 22.33 0.00 33.95 3.62
2599 10230 0.327000 AGGCCTGCTCCTATGAACCT 60.327 55.000 3.11 0.00 33.95 3.50
2600 10231 0.107643 GGCCTGCTCCTATGAACCTC 59.892 60.000 0.00 0.00 0.00 3.85
2601 10232 0.107643 GCCTGCTCCTATGAACCTCC 59.892 60.000 0.00 0.00 0.00 4.30
2602 10233 1.500474 CCTGCTCCTATGAACCTCCA 58.500 55.000 0.00 0.00 0.00 3.86
2603 10234 2.053244 CCTGCTCCTATGAACCTCCAT 58.947 52.381 0.00 0.00 0.00 3.41
2604 10235 2.038295 CCTGCTCCTATGAACCTCCATC 59.962 54.545 0.00 0.00 0.00 3.51
2605 10236 2.971330 CTGCTCCTATGAACCTCCATCT 59.029 50.000 0.00 0.00 0.00 2.90
2606 10237 3.387962 TGCTCCTATGAACCTCCATCTT 58.612 45.455 0.00 0.00 0.00 2.40
2607 10238 3.782523 TGCTCCTATGAACCTCCATCTTT 59.217 43.478 0.00 0.00 0.00 2.52
2608 10239 4.141620 TGCTCCTATGAACCTCCATCTTTC 60.142 45.833 0.00 0.00 0.00 2.62
2609 10240 4.141620 GCTCCTATGAACCTCCATCTTTCA 60.142 45.833 0.00 0.00 33.89 2.69
2610 10241 5.455899 GCTCCTATGAACCTCCATCTTTCAT 60.456 44.000 0.00 0.00 41.67 2.57
2611 10242 6.239714 GCTCCTATGAACCTCCATCTTTCATA 60.240 42.308 0.00 0.00 39.92 2.15
2612 10243 7.067496 TCCTATGAACCTCCATCTTTCATAC 57.933 40.000 0.00 0.00 39.92 2.39
2613 10244 6.846505 TCCTATGAACCTCCATCTTTCATACT 59.153 38.462 0.00 0.00 39.92 2.12
2614 10245 7.015682 TCCTATGAACCTCCATCTTTCATACTC 59.984 40.741 0.00 0.00 39.92 2.59
2615 10246 5.359194 TGAACCTCCATCTTTCATACTCC 57.641 43.478 0.00 0.00 0.00 3.85
2616 10247 4.164221 TGAACCTCCATCTTTCATACTCCC 59.836 45.833 0.00 0.00 0.00 4.30
2617 10248 4.014273 ACCTCCATCTTTCATACTCCCT 57.986 45.455 0.00 0.00 0.00 4.20
2618 10249 3.970640 ACCTCCATCTTTCATACTCCCTC 59.029 47.826 0.00 0.00 0.00 4.30
2619 10250 3.326297 CCTCCATCTTTCATACTCCCTCC 59.674 52.174 0.00 0.00 0.00 4.30
2620 10251 2.965831 TCCATCTTTCATACTCCCTCCG 59.034 50.000 0.00 0.00 0.00 4.63
2621 10252 2.700897 CCATCTTTCATACTCCCTCCGT 59.299 50.000 0.00 0.00 0.00 4.69
2622 10253 3.134804 CCATCTTTCATACTCCCTCCGTT 59.865 47.826 0.00 0.00 0.00 4.44
2623 10254 4.384208 CCATCTTTCATACTCCCTCCGTTT 60.384 45.833 0.00 0.00 0.00 3.60
2624 10255 4.467198 TCTTTCATACTCCCTCCGTTTC 57.533 45.455 0.00 0.00 0.00 2.78
2625 10256 4.094476 TCTTTCATACTCCCTCCGTTTCT 58.906 43.478 0.00 0.00 0.00 2.52
2626 10257 4.530946 TCTTTCATACTCCCTCCGTTTCTT 59.469 41.667 0.00 0.00 0.00 2.52
2627 10258 4.903045 TTCATACTCCCTCCGTTTCTTT 57.097 40.909 0.00 0.00 0.00 2.52
2628 10259 4.903045 TCATACTCCCTCCGTTTCTTTT 57.097 40.909 0.00 0.00 0.00 2.27
2629 10260 5.237236 TCATACTCCCTCCGTTTCTTTTT 57.763 39.130 0.00 0.00 0.00 1.94
2630 10261 6.363167 TCATACTCCCTCCGTTTCTTTTTA 57.637 37.500 0.00 0.00 0.00 1.52
2631 10262 6.403878 TCATACTCCCTCCGTTTCTTTTTAG 58.596 40.000 0.00 0.00 0.00 1.85
2632 10263 4.701651 ACTCCCTCCGTTTCTTTTTAGT 57.298 40.909 0.00 0.00 0.00 2.24
2633 10264 5.045012 ACTCCCTCCGTTTCTTTTTAGTT 57.955 39.130 0.00 0.00 0.00 2.24
2634 10265 5.443283 ACTCCCTCCGTTTCTTTTTAGTTT 58.557 37.500 0.00 0.00 0.00 2.66
2635 10266 5.298527 ACTCCCTCCGTTTCTTTTTAGTTTG 59.701 40.000 0.00 0.00 0.00 2.93
2636 10267 4.037089 TCCCTCCGTTTCTTTTTAGTTTGC 59.963 41.667 0.00 0.00 0.00 3.68
2637 10268 4.202070 CCCTCCGTTTCTTTTTAGTTTGCA 60.202 41.667 0.00 0.00 0.00 4.08
2638 10269 5.508994 CCCTCCGTTTCTTTTTAGTTTGCAT 60.509 40.000 0.00 0.00 0.00 3.96
2639 10270 6.294286 CCCTCCGTTTCTTTTTAGTTTGCATA 60.294 38.462 0.00 0.00 0.00 3.14
2640 10271 7.312899 CCTCCGTTTCTTTTTAGTTTGCATAT 58.687 34.615 0.00 0.00 0.00 1.78
2641 10272 8.455682 CCTCCGTTTCTTTTTAGTTTGCATATA 58.544 33.333 0.00 0.00 0.00 0.86
2642 10273 9.834628 CTCCGTTTCTTTTTAGTTTGCATATAA 57.165 29.630 0.00 0.00 0.00 0.98
2656 10287 9.777297 AGTTTGCATATAAAATTTGGTCAAAGT 57.223 25.926 0.00 0.00 33.32 2.66
2658 10289 9.770097 TTTGCATATAAAATTTGGTCAAAGTCA 57.230 25.926 0.00 0.00 33.32 3.41
2659 10290 9.770097 TTGCATATAAAATTTGGTCAAAGTCAA 57.230 25.926 0.00 0.00 33.32 3.18
2660 10291 9.770097 TGCATATAAAATTTGGTCAAAGTCAAA 57.230 25.926 0.00 0.00 37.29 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
272 765 3.069318 GCGTTCTCGAGGGGTCCT 61.069 66.667 13.56 0.00 39.71 3.85
282 775 0.880278 TTGTGGCTCAGTGCGTTCTC 60.880 55.000 0.00 0.00 44.05 2.87
365 4754 2.287368 CCGCAAGCCGTACTTTTCTTTT 60.287 45.455 0.00 0.00 36.04 2.27
366 4755 1.265905 CCGCAAGCCGTACTTTTCTTT 59.734 47.619 0.00 0.00 36.04 2.52
367 4756 0.872388 CCGCAAGCCGTACTTTTCTT 59.128 50.000 0.00 0.00 36.04 2.52
368 4757 1.574702 GCCGCAAGCCGTACTTTTCT 61.575 55.000 0.00 0.00 36.04 2.52
369 4758 1.154282 GCCGCAAGCCGTACTTTTC 60.154 57.895 0.00 0.00 36.04 2.29
370 4759 1.894756 TGCCGCAAGCCGTACTTTT 60.895 52.632 0.00 0.00 42.71 2.27
371 4760 2.281208 TGCCGCAAGCCGTACTTT 60.281 55.556 0.00 0.00 42.71 2.66
372 4761 3.047877 GTGCCGCAAGCCGTACTT 61.048 61.111 0.00 0.00 42.71 2.24
380 4769 3.058160 CTTGAGGGGTGCCGCAAG 61.058 66.667 8.01 0.00 33.03 4.01
385 4774 1.202940 AGTTTCTTCTTGAGGGGTGCC 60.203 52.381 0.00 0.00 0.00 5.01
397 4786 2.876550 ACAAACAGCCCGTAGTTTCTTC 59.123 45.455 0.00 0.00 35.90 2.87
400 4789 3.703286 AAACAAACAGCCCGTAGTTTC 57.297 42.857 0.00 0.00 35.90 2.78
404 7152 3.120304 GCTAGAAAACAAACAGCCCGTAG 60.120 47.826 0.00 0.00 0.00 3.51
409 7157 3.796717 GTGTTGCTAGAAAACAAACAGCC 59.203 43.478 11.67 0.00 39.14 4.85
412 7167 6.942886 CAAAGTGTTGCTAGAAAACAAACA 57.057 33.333 11.67 1.63 39.14 2.83
427 7182 2.306847 CCTAAGGTGTGGCAAAGTGTT 58.693 47.619 0.00 0.00 0.00 3.32
428 7183 1.214424 ACCTAAGGTGTGGCAAAGTGT 59.786 47.619 0.00 0.00 32.98 3.55
430 7185 2.748209 AACCTAAGGTGTGGCAAAGT 57.252 45.000 0.00 0.00 35.34 2.66
431 7186 3.751698 GTCTAACCTAAGGTGTGGCAAAG 59.248 47.826 0.00 0.00 35.34 2.77
432 7187 3.136809 TGTCTAACCTAAGGTGTGGCAAA 59.863 43.478 0.00 0.00 35.34 3.68
433 7188 2.706723 TGTCTAACCTAAGGTGTGGCAA 59.293 45.455 0.00 0.00 35.34 4.52
434 7189 2.331166 TGTCTAACCTAAGGTGTGGCA 58.669 47.619 0.00 0.00 35.34 4.92
435 7190 3.244457 ACTTGTCTAACCTAAGGTGTGGC 60.244 47.826 0.00 0.00 35.34 5.01
436 7191 4.618920 ACTTGTCTAACCTAAGGTGTGG 57.381 45.455 0.00 0.00 35.34 4.17
438 7193 8.434392 TGATTAAACTTGTCTAACCTAAGGTGT 58.566 33.333 0.00 0.00 35.34 4.16
439 7194 8.842358 TGATTAAACTTGTCTAACCTAAGGTG 57.158 34.615 0.00 0.00 35.34 4.00
440 7195 9.503399 CTTGATTAAACTTGTCTAACCTAAGGT 57.497 33.333 0.00 0.00 37.65 3.50
441 7196 9.503399 ACTTGATTAAACTTGTCTAACCTAAGG 57.497 33.333 0.00 0.00 0.00 2.69
445 7200 9.503399 CCTAACTTGATTAAACTTGTCTAACCT 57.497 33.333 0.00 0.00 0.00 3.50
446 7201 9.281371 ACCTAACTTGATTAAACTTGTCTAACC 57.719 33.333 0.00 0.00 0.00 2.85
448 7203 9.280174 CCACCTAACTTGATTAAACTTGTCTAA 57.720 33.333 0.00 0.00 0.00 2.10
449 7204 8.434392 ACCACCTAACTTGATTAAACTTGTCTA 58.566 33.333 0.00 0.00 0.00 2.59
450 7205 7.287810 ACCACCTAACTTGATTAAACTTGTCT 58.712 34.615 0.00 0.00 0.00 3.41
451 7206 7.506328 ACCACCTAACTTGATTAAACTTGTC 57.494 36.000 0.00 0.00 0.00 3.18
452 7207 7.891498 AACCACCTAACTTGATTAAACTTGT 57.109 32.000 0.00 0.00 0.00 3.16
457 7212 9.369672 ACCAAATAACCACCTAACTTGATTAAA 57.630 29.630 0.00 0.00 0.00 1.52
461 7216 7.238710 AGAACCAAATAACCACCTAACTTGAT 58.761 34.615 0.00 0.00 0.00 2.57
462 7217 6.607019 AGAACCAAATAACCACCTAACTTGA 58.393 36.000 0.00 0.00 0.00 3.02
466 7221 7.149569 GGTTAGAACCAAATAACCACCTAAC 57.850 40.000 6.56 0.00 46.76 2.34
485 7241 9.520515 AAATATTCATGCCTTAGGTATGGTTAG 57.479 33.333 25.09 3.71 44.14 2.34
487 7243 8.782137 AAAATATTCATGCCTTAGGTATGGTT 57.218 30.769 25.09 16.43 44.14 3.67
488 7244 8.782137 AAAAATATTCATGCCTTAGGTATGGT 57.218 30.769 25.09 17.53 44.14 3.55
509 7265 9.295825 ACATGTGAGGTTCATTACTCATAAAAA 57.704 29.630 0.00 0.00 44.65 1.94
510 7266 8.862325 ACATGTGAGGTTCATTACTCATAAAA 57.138 30.769 0.00 0.00 44.65 1.52
511 7267 8.100164 TGACATGTGAGGTTCATTACTCATAAA 58.900 33.333 1.15 0.00 44.65 1.40
514 7270 6.053632 TGACATGTGAGGTTCATTACTCAT 57.946 37.500 1.15 0.00 44.65 2.90
515 7271 5.482163 TGACATGTGAGGTTCATTACTCA 57.518 39.130 1.15 0.00 41.13 3.41
517 7273 7.093333 TGTCTATGACATGTGAGGTTCATTACT 60.093 37.037 1.15 0.00 37.67 2.24
518 7274 7.041721 TGTCTATGACATGTGAGGTTCATTAC 58.958 38.462 1.15 2.66 37.67 1.89
519 7275 7.181569 TGTCTATGACATGTGAGGTTCATTA 57.818 36.000 1.15 0.00 37.67 1.90
533 7289 5.942826 TGCCACACATTTTATGTCTATGACA 59.057 36.000 2.77 2.77 46.90 3.58
534 7290 6.435430 TGCCACACATTTTATGTCTATGAC 57.565 37.500 0.00 0.00 42.70 3.06
535 7291 6.883756 TCTTGCCACACATTTTATGTCTATGA 59.116 34.615 0.00 0.00 42.70 2.15
536 7292 7.087409 TCTTGCCACACATTTTATGTCTATG 57.913 36.000 0.00 0.00 42.70 2.23
537 7293 7.886629 ATCTTGCCACACATTTTATGTCTAT 57.113 32.000 0.00 0.00 42.70 1.98
538 7294 7.611467 AGAATCTTGCCACACATTTTATGTCTA 59.389 33.333 0.00 0.00 42.70 2.59
539 7295 6.435277 AGAATCTTGCCACACATTTTATGTCT 59.565 34.615 0.00 0.00 42.70 3.41
540 7296 6.624423 AGAATCTTGCCACACATTTTATGTC 58.376 36.000 0.00 0.00 42.70 3.06
541 7297 6.594788 AGAATCTTGCCACACATTTTATGT 57.405 33.333 0.00 0.00 46.22 2.29
542 7298 7.894376 AAAGAATCTTGCCACACATTTTATG 57.106 32.000 0.00 0.00 0.00 1.90
543 7299 9.643693 CTAAAAGAATCTTGCCACACATTTTAT 57.356 29.630 0.00 0.00 0.00 1.40
544 7300 8.087750 CCTAAAAGAATCTTGCCACACATTTTA 58.912 33.333 0.00 0.00 0.00 1.52
545 7301 6.930722 CCTAAAAGAATCTTGCCACACATTTT 59.069 34.615 0.00 0.00 0.00 1.82
546 7302 6.458210 CCTAAAAGAATCTTGCCACACATTT 58.542 36.000 0.00 0.00 0.00 2.32
547 7303 5.567423 GCCTAAAAGAATCTTGCCACACATT 60.567 40.000 0.00 0.00 0.00 2.71
548 7304 4.082026 GCCTAAAAGAATCTTGCCACACAT 60.082 41.667 0.00 0.00 0.00 3.21
549 7305 3.255642 GCCTAAAAGAATCTTGCCACACA 59.744 43.478 0.00 0.00 0.00 3.72
550 7306 3.255642 TGCCTAAAAGAATCTTGCCACAC 59.744 43.478 0.00 0.00 0.00 3.82
551 7307 3.495331 TGCCTAAAAGAATCTTGCCACA 58.505 40.909 0.00 0.00 0.00 4.17
552 7308 4.488879 CTTGCCTAAAAGAATCTTGCCAC 58.511 43.478 0.00 0.00 0.00 5.01
553 7309 3.056607 GCTTGCCTAAAAGAATCTTGCCA 60.057 43.478 0.00 0.00 0.00 4.92
554 7310 3.515630 GCTTGCCTAAAAGAATCTTGCC 58.484 45.455 0.00 0.00 0.00 4.52
555 7311 3.056607 TGGCTTGCCTAAAAGAATCTTGC 60.057 43.478 13.18 0.00 0.00 4.01
556 7312 4.789012 TGGCTTGCCTAAAAGAATCTTG 57.211 40.909 13.18 0.00 0.00 3.02
557 7313 5.806654 TTTGGCTTGCCTAAAAGAATCTT 57.193 34.783 13.18 0.00 0.00 2.40
558 7314 5.806654 TTTTGGCTTGCCTAAAAGAATCT 57.193 34.783 16.36 0.00 0.00 2.40
559 7315 7.981225 TCATATTTTGGCTTGCCTAAAAGAATC 59.019 33.333 20.87 0.00 0.00 2.52
560 7316 7.765819 GTCATATTTTGGCTTGCCTAAAAGAAT 59.234 33.333 20.87 13.58 0.00 2.40
561 7317 7.039082 AGTCATATTTTGGCTTGCCTAAAAGAA 60.039 33.333 20.87 12.28 36.73 2.52
562 7318 6.437162 AGTCATATTTTGGCTTGCCTAAAAGA 59.563 34.615 20.87 17.06 36.73 2.52
563 7319 6.633856 AGTCATATTTTGGCTTGCCTAAAAG 58.366 36.000 20.87 14.93 36.73 2.27
564 7320 6.603940 AGTCATATTTTGGCTTGCCTAAAA 57.396 33.333 20.87 18.94 36.73 1.52
565 7321 7.177568 TGTTAGTCATATTTTGGCTTGCCTAAA 59.822 33.333 19.72 19.72 36.73 1.85
566 7322 6.661377 TGTTAGTCATATTTTGGCTTGCCTAA 59.339 34.615 13.18 8.76 36.73 2.69
567 7323 6.184068 TGTTAGTCATATTTTGGCTTGCCTA 58.816 36.000 13.18 2.12 36.73 3.93
568 7324 5.016173 TGTTAGTCATATTTTGGCTTGCCT 58.984 37.500 13.18 0.00 36.73 4.75
569 7325 5.323371 TGTTAGTCATATTTTGGCTTGCC 57.677 39.130 4.43 4.43 36.73 4.52
570 7326 7.832503 AATTGTTAGTCATATTTTGGCTTGC 57.167 32.000 0.00 0.00 36.73 4.01
571 7327 9.421806 TCAAATTGTTAGTCATATTTTGGCTTG 57.578 29.630 0.00 0.00 36.73 4.01
572 7328 9.643693 CTCAAATTGTTAGTCATATTTTGGCTT 57.356 29.630 0.00 0.00 36.73 4.35
573 7329 7.761249 GCTCAAATTGTTAGTCATATTTTGGCT 59.239 33.333 0.00 0.00 44.33 4.75
574 7330 7.545265 TGCTCAAATTGTTAGTCATATTTTGGC 59.455 33.333 0.00 0.00 0.00 4.52
575 7331 8.984891 TGCTCAAATTGTTAGTCATATTTTGG 57.015 30.769 0.00 0.00 0.00 3.28
578 7334 9.846248 GAGTTGCTCAAATTGTTAGTCATATTT 57.154 29.630 0.00 0.00 0.00 1.40
579 7335 9.013229 TGAGTTGCTCAAATTGTTAGTCATATT 57.987 29.630 0.00 0.00 37.57 1.28
580 7336 8.565896 TGAGTTGCTCAAATTGTTAGTCATAT 57.434 30.769 0.00 0.00 37.57 1.78
581 7337 7.977789 TGAGTTGCTCAAATTGTTAGTCATA 57.022 32.000 0.00 0.00 37.57 2.15
582 7338 6.882610 TGAGTTGCTCAAATTGTTAGTCAT 57.117 33.333 0.00 0.00 37.57 3.06
583 7339 6.691754 TTGAGTTGCTCAAATTGTTAGTCA 57.308 33.333 8.89 0.00 45.84 3.41
594 7350 3.207265 TGCCTAACTTGAGTTGCTCAA 57.793 42.857 10.61 10.61 46.50 3.02
595 7351 2.928801 TGCCTAACTTGAGTTGCTCA 57.071 45.000 6.64 0.00 38.87 4.26
596 7352 4.022849 ACAATTGCCTAACTTGAGTTGCTC 60.023 41.667 5.05 0.00 38.90 4.26
597 7353 3.891366 ACAATTGCCTAACTTGAGTTGCT 59.109 39.130 5.05 0.00 38.90 3.91
598 7354 3.983344 CACAATTGCCTAACTTGAGTTGC 59.017 43.478 5.05 3.38 38.90 4.17
599 7355 4.549458 CCACAATTGCCTAACTTGAGTTG 58.451 43.478 5.05 0.00 38.90 3.16
600 7356 3.005791 GCCACAATTGCCTAACTTGAGTT 59.994 43.478 5.05 1.60 41.73 3.01
601 7357 2.558359 GCCACAATTGCCTAACTTGAGT 59.442 45.455 5.05 0.00 0.00 3.41
602 7358 2.557924 TGCCACAATTGCCTAACTTGAG 59.442 45.455 5.05 0.00 0.00 3.02
603 7359 2.591923 TGCCACAATTGCCTAACTTGA 58.408 42.857 5.05 0.00 0.00 3.02
604 7360 3.383620 TTGCCACAATTGCCTAACTTG 57.616 42.857 5.05 0.00 0.00 3.16
605 7361 4.414337 TTTTGCCACAATTGCCTAACTT 57.586 36.364 5.05 0.00 0.00 2.66
606 7362 4.414337 TTTTTGCCACAATTGCCTAACT 57.586 36.364 5.05 0.00 0.00 2.24
607 7363 6.793492 TTATTTTTGCCACAATTGCCTAAC 57.207 33.333 5.05 0.00 0.00 2.34
608 7364 6.939163 ACATTATTTTTGCCACAATTGCCTAA 59.061 30.769 5.05 0.00 0.00 2.69
609 7365 6.370994 CACATTATTTTTGCCACAATTGCCTA 59.629 34.615 5.05 0.00 0.00 3.93
610 7366 5.181622 CACATTATTTTTGCCACAATTGCCT 59.818 36.000 5.05 0.00 0.00 4.75
611 7367 5.392286 CACATTATTTTTGCCACAATTGCC 58.608 37.500 5.05 0.00 0.00 4.52
612 7368 5.392286 CCACATTATTTTTGCCACAATTGC 58.608 37.500 5.05 0.00 0.00 3.56
613 7369 5.048921 TGCCACATTATTTTTGCCACAATTG 60.049 36.000 3.24 3.24 0.00 2.32
614 7370 5.068636 TGCCACATTATTTTTGCCACAATT 58.931 33.333 0.00 0.00 0.00 2.32
615 7371 4.649692 TGCCACATTATTTTTGCCACAAT 58.350 34.783 0.00 0.00 0.00 2.71
616 7372 4.077300 TGCCACATTATTTTTGCCACAA 57.923 36.364 0.00 0.00 0.00 3.33
617 7373 3.758755 TGCCACATTATTTTTGCCACA 57.241 38.095 0.00 0.00 0.00 4.17
618 7374 6.018016 GGATTATGCCACATTATTTTTGCCAC 60.018 38.462 0.00 0.00 0.00 5.01
619 7375 6.054295 GGATTATGCCACATTATTTTTGCCA 58.946 36.000 0.00 0.00 0.00 4.92
620 7376 6.054295 TGGATTATGCCACATTATTTTTGCC 58.946 36.000 0.00 0.00 31.66 4.52
633 7389 0.329931 AACACCGGTGGATTATGCCA 59.670 50.000 36.47 0.00 35.02 4.92
790 8123 3.488569 TATCTGGGCGGCAAGGGG 61.489 66.667 14.28 0.00 0.00 4.79
812 8168 0.390603 CTGGCGACGGACAAATGGTA 60.391 55.000 0.00 0.00 39.98 3.25
833 8189 4.448732 GCTTTGGTGATGATTTTTGTGGTC 59.551 41.667 0.00 0.00 0.00 4.02
834 8190 4.379652 GCTTTGGTGATGATTTTTGTGGT 58.620 39.130 0.00 0.00 0.00 4.16
840 8196 4.834496 TCTCTTGGCTTTGGTGATGATTTT 59.166 37.500 0.00 0.00 0.00 1.82
843 8199 3.265221 TCTCTCTTGGCTTTGGTGATGAT 59.735 43.478 0.00 0.00 0.00 2.45
844 8200 2.639347 TCTCTCTTGGCTTTGGTGATGA 59.361 45.455 0.00 0.00 0.00 2.92
849 8205 3.840666 TGTATCTCTCTCTTGGCTTTGGT 59.159 43.478 0.00 0.00 0.00 3.67
853 8212 4.093011 ACTGTGTATCTCTCTCTTGGCTT 58.907 43.478 0.00 0.00 0.00 4.35
1096 8496 5.788450 TCAGACAAGAGCCAAAAACAAAAA 58.212 33.333 0.00 0.00 0.00 1.94
1242 8659 4.286910 GACGAAGCAGAGCAAGATACTAG 58.713 47.826 0.00 0.00 0.00 2.57
1246 8663 1.799181 GCGACGAAGCAGAGCAAGATA 60.799 52.381 0.00 0.00 37.05 1.98
1271 8688 5.301805 CCTTCAATTCCGCCCATAATTACTT 59.698 40.000 0.00 0.00 0.00 2.24
1306 8726 4.889409 GGCAGTCCAAATTCAAGATGGATA 59.111 41.667 0.00 0.00 44.55 2.59
1533 9026 2.669240 CCGTCCTTCTTGTCCCCC 59.331 66.667 0.00 0.00 0.00 5.40
1719 9244 1.810030 GGGACAGCGACGGAATGTC 60.810 63.158 0.00 4.36 44.53 3.06
1783 9318 5.865085 TGATCAGTAAAGCAACTACCAAGT 58.135 37.500 0.00 0.00 37.65 3.16
1784 9319 5.163814 GCTGATCAGTAAAGCAACTACCAAG 60.164 44.000 23.38 0.00 36.91 3.61
1797 9335 1.762957 GGCAGGTAGGCTGATCAGTAA 59.237 52.381 23.38 7.10 40.24 2.24
1802 9340 2.280457 GCGGCAGGTAGGCTGATC 60.280 66.667 0.00 0.00 42.91 2.92
1843 9381 7.658179 TTATACTATACGTAGCTGTAACGCT 57.342 36.000 7.41 0.00 44.04 5.07
1881 9430 1.000163 AGCTATCGATGCAACCGGTAG 60.000 52.381 20.94 20.94 42.01 3.18
2046 9654 6.537453 TTTTTCCATCAGGAGAACAAACAA 57.463 33.333 0.00 0.00 46.74 2.83
2098 9726 6.451064 AGTATACTCATGTGACGTGAATGA 57.549 37.500 9.01 0.00 0.00 2.57
2099 9727 8.628882 TTAAGTATACTCATGTGACGTGAATG 57.371 34.615 9.01 0.89 0.00 2.67
2110 9738 7.359598 GCTGAGCCGAATTTAAGTATACTCATG 60.360 40.741 5.70 0.00 31.78 3.07
2112 9740 5.983720 GCTGAGCCGAATTTAAGTATACTCA 59.016 40.000 5.70 0.00 0.00 3.41
2165 9793 1.597663 AGACTTTGCAAGACCGTTTCG 59.402 47.619 0.00 0.00 0.00 3.46
2197 9825 5.062308 GCATCGACTGAGACTTCGTTAATTT 59.938 40.000 0.00 0.00 36.60 1.82
2213 9841 3.676093 TCTCGTGGATATAGCATCGACT 58.324 45.455 0.00 0.00 0.00 4.18
2217 9845 7.089770 TGTAAGATCTCGTGGATATAGCATC 57.910 40.000 0.00 0.00 34.33 3.91
2229 9858 7.495901 ACATGAATCTCAATGTAAGATCTCGT 58.504 34.615 0.00 0.00 32.29 4.18
2230 9859 7.943413 ACATGAATCTCAATGTAAGATCTCG 57.057 36.000 0.00 0.00 32.29 4.04
2298 9929 1.517694 CCATGGCGCAATCAAGTGC 60.518 57.895 10.83 0.00 44.00 4.40
2309 9940 2.285220 CGACTGAGATTTAACCATGGCG 59.715 50.000 13.04 0.00 0.00 5.69
2311 9942 4.568359 CAGTCGACTGAGATTTAACCATGG 59.432 45.833 36.73 11.19 46.59 3.66
2328 9959 0.037734 TGTGGCTAGGTCTCAGTCGA 59.962 55.000 0.00 0.00 0.00 4.20
2330 9961 0.533032 GGTGTGGCTAGGTCTCAGTC 59.467 60.000 0.00 0.00 0.00 3.51
2337 9968 1.000896 GCAATGGGTGTGGCTAGGT 60.001 57.895 0.00 0.00 0.00 3.08
2369 10000 1.455786 GTCGTGCATGTATACATCGCC 59.544 52.381 24.72 18.46 33.61 5.54
2387 10018 0.815213 TTAGCCATCATGCAGCCGTC 60.815 55.000 0.00 0.00 0.00 4.79
2388 10019 0.179009 ATTAGCCATCATGCAGCCGT 60.179 50.000 0.00 0.00 0.00 5.68
2389 10020 0.520404 GATTAGCCATCATGCAGCCG 59.480 55.000 0.00 0.00 0.00 5.52
2409 10040 0.041663 CCGGCGCATAAATACGGTTG 60.042 55.000 10.83 0.00 39.70 3.77
2427 10058 5.365895 ACCTGTGTATATAAAGGTGAGACCC 59.634 44.000 10.43 0.00 41.52 4.46
2428 10059 6.481434 ACCTGTGTATATAAAGGTGAGACC 57.519 41.667 10.43 0.00 41.52 3.85
2429 10060 8.461249 TCTACCTGTGTATATAAAGGTGAGAC 57.539 38.462 19.10 0.00 42.96 3.36
2430 10061 8.500238 TCTCTACCTGTGTATATAAAGGTGAGA 58.500 37.037 22.73 22.73 42.96 3.27
2431 10062 8.569641 GTCTCTACCTGTGTATATAAAGGTGAG 58.430 40.741 19.10 19.90 42.96 3.51
2432 10063 7.504911 GGTCTCTACCTGTGTATATAAAGGTGA 59.495 40.741 19.10 13.44 42.96 4.02
2433 10064 7.255871 GGGTCTCTACCTGTGTATATAAAGGTG 60.256 44.444 19.10 10.50 45.95 4.00
2434 10065 6.781507 GGGTCTCTACCTGTGTATATAAAGGT 59.218 42.308 15.13 15.13 45.95 3.50
2435 10066 6.072064 CGGGTCTCTACCTGTGTATATAAAGG 60.072 46.154 4.18 4.18 45.83 3.11
2436 10067 6.910995 CGGGTCTCTACCTGTGTATATAAAG 58.089 44.000 0.00 0.00 45.83 1.85
2437 10068 6.889301 CGGGTCTCTACCTGTGTATATAAA 57.111 41.667 0.00 0.00 45.83 1.40
2448 10079 1.876546 AAGCCTCCGGGTCTCTACCT 61.877 60.000 0.00 0.00 45.95 3.08
2449 10080 0.106318 TAAGCCTCCGGGTCTCTACC 60.106 60.000 0.00 0.00 45.97 3.18
2450 10081 1.031235 GTAAGCCTCCGGGTCTCTAC 58.969 60.000 0.00 0.00 30.76 2.59
2451 10082 0.627451 TGTAAGCCTCCGGGTCTCTA 59.373 55.000 0.00 0.00 30.76 2.43
2452 10083 0.684805 CTGTAAGCCTCCGGGTCTCT 60.685 60.000 0.00 0.00 30.76 3.10
2453 10084 0.683504 TCTGTAAGCCTCCGGGTCTC 60.684 60.000 0.00 0.00 30.76 3.36
2454 10085 0.684805 CTCTGTAAGCCTCCGGGTCT 60.685 60.000 0.00 0.00 30.76 3.85
2455 10086 0.971447 ACTCTGTAAGCCTCCGGGTC 60.971 60.000 0.00 0.00 30.76 4.46
2456 10087 0.971447 GACTCTGTAAGCCTCCGGGT 60.971 60.000 0.00 0.00 33.45 5.28
2457 10088 1.677637 GGACTCTGTAAGCCTCCGGG 61.678 65.000 0.00 0.00 0.00 5.73
2458 10089 1.677637 GGGACTCTGTAAGCCTCCGG 61.678 65.000 0.00 0.00 31.86 5.14
2459 10090 0.684805 AGGGACTCTGTAAGCCTCCG 60.685 60.000 0.00 0.00 31.86 4.63
2460 10091 0.827368 CAGGGACTCTGTAAGCCTCC 59.173 60.000 0.00 0.00 34.60 4.30
2461 10092 0.176910 GCAGGGACTCTGTAAGCCTC 59.823 60.000 3.80 0.00 45.08 4.70
2462 10093 1.268283 GGCAGGGACTCTGTAAGCCT 61.268 60.000 3.80 0.00 45.08 4.58
2463 10094 1.222113 GGCAGGGACTCTGTAAGCC 59.778 63.158 3.80 0.00 45.08 4.35
2464 10095 1.153549 CGGCAGGGACTCTGTAAGC 60.154 63.158 3.80 0.00 45.08 3.09
2465 10096 1.517832 CCGGCAGGGACTCTGTAAG 59.482 63.158 3.80 0.00 45.08 2.34
2466 10097 2.656069 GCCGGCAGGGACTCTGTAA 61.656 63.158 24.80 0.00 45.08 2.41
2467 10098 3.075005 GCCGGCAGGGACTCTGTA 61.075 66.667 24.80 0.00 45.08 2.74
2469 10100 4.154347 GAGCCGGCAGGGACTCTG 62.154 72.222 31.54 0.00 46.03 3.35
2470 10101 4.704103 TGAGCCGGCAGGGACTCT 62.704 66.667 31.54 4.27 38.79 3.24
2471 10102 4.459089 GTGAGCCGGCAGGGACTC 62.459 72.222 31.54 16.99 34.60 3.36
2475 10106 4.641645 TTGTGTGAGCCGGCAGGG 62.642 66.667 31.54 0.00 38.20 4.45
2476 10107 3.357079 GTTGTGTGAGCCGGCAGG 61.357 66.667 31.54 0.00 41.62 4.85
2477 10108 3.716006 CGTTGTGTGAGCCGGCAG 61.716 66.667 31.54 3.88 0.00 4.85
2478 10109 4.539083 ACGTTGTGTGAGCCGGCA 62.539 61.111 31.54 5.56 0.00 5.69
2487 10118 2.279918 GAGCCGGTCACGTTGTGT 60.280 61.111 1.90 0.00 38.78 3.72
2488 10119 3.403057 CGAGCCGGTCACGTTGTG 61.403 66.667 1.90 0.00 38.78 3.33
2489 10120 4.657824 CCGAGCCGGTCACGTTGT 62.658 66.667 1.90 0.00 42.73 3.32
2504 10135 9.075712 ATGTATGGCATGATTAGTTGGAAACCG 62.076 40.741 10.98 0.00 41.63 4.44
2505 10136 6.040842 ATGTATGGCATGATTAGTTGGAAACC 59.959 38.462 10.98 0.00 41.63 3.27
2506 10137 7.042797 ATGTATGGCATGATTAGTTGGAAAC 57.957 36.000 10.98 0.00 41.25 2.78
2507 10138 7.040478 GCTATGTATGGCATGATTAGTTGGAAA 60.040 37.037 10.98 0.00 38.47 3.13
2508 10139 6.430925 GCTATGTATGGCATGATTAGTTGGAA 59.569 38.462 10.98 0.00 38.47 3.53
2509 10140 5.939883 GCTATGTATGGCATGATTAGTTGGA 59.060 40.000 10.98 0.00 38.47 3.53
2510 10141 5.706833 TGCTATGTATGGCATGATTAGTTGG 59.293 40.000 10.98 0.00 39.44 3.77
2511 10142 6.806388 TGCTATGTATGGCATGATTAGTTG 57.194 37.500 10.98 0.00 39.44 3.16
2512 10143 7.000472 ACTTGCTATGTATGGCATGATTAGTT 59.000 34.615 18.35 0.00 43.86 2.24
2513 10144 6.537355 ACTTGCTATGTATGGCATGATTAGT 58.463 36.000 18.35 9.78 43.86 2.24
2514 10145 6.652062 TGACTTGCTATGTATGGCATGATTAG 59.348 38.462 18.35 8.83 43.86 1.73
2515 10146 6.532826 TGACTTGCTATGTATGGCATGATTA 58.467 36.000 18.35 0.00 43.86 1.75
2516 10147 5.379187 TGACTTGCTATGTATGGCATGATT 58.621 37.500 18.35 0.00 43.86 2.57
2517 10148 4.976864 TGACTTGCTATGTATGGCATGAT 58.023 39.130 18.35 4.68 43.86 2.45
2518 10149 4.420522 TGACTTGCTATGTATGGCATGA 57.579 40.909 18.35 0.00 43.86 3.07
2519 10150 4.142966 CGATGACTTGCTATGTATGGCATG 60.143 45.833 10.98 12.40 43.86 4.06
2520 10151 3.999001 CGATGACTTGCTATGTATGGCAT 59.001 43.478 4.88 4.88 43.86 4.40
2521 10152 3.181466 ACGATGACTTGCTATGTATGGCA 60.181 43.478 0.00 0.00 42.73 4.92
2522 10153 3.393800 ACGATGACTTGCTATGTATGGC 58.606 45.455 0.00 0.00 34.56 4.40
2523 10154 4.617223 CGTACGATGACTTGCTATGTATGG 59.383 45.833 10.44 0.00 0.00 2.74
2524 10155 4.617223 CCGTACGATGACTTGCTATGTATG 59.383 45.833 18.76 0.00 0.00 2.39
2525 10156 4.795268 CCGTACGATGACTTGCTATGTAT 58.205 43.478 18.76 0.00 0.00 2.29
2526 10157 3.549423 GCCGTACGATGACTTGCTATGTA 60.549 47.826 18.76 0.00 0.00 2.29
2527 10158 2.798499 GCCGTACGATGACTTGCTATGT 60.798 50.000 18.76 0.00 0.00 2.29
2528 10159 1.787155 GCCGTACGATGACTTGCTATG 59.213 52.381 18.76 0.00 0.00 2.23
2529 10160 1.269621 GGCCGTACGATGACTTGCTAT 60.270 52.381 18.76 0.00 0.00 2.97
2530 10161 0.101759 GGCCGTACGATGACTTGCTA 59.898 55.000 18.76 0.00 0.00 3.49
2531 10162 1.153628 GGCCGTACGATGACTTGCT 60.154 57.895 18.76 0.00 0.00 3.91
2532 10163 2.514013 CGGCCGTACGATGACTTGC 61.514 63.158 19.50 9.42 35.47 4.01
2533 10164 1.138036 TCGGCCGTACGATGACTTG 59.862 57.895 27.15 0.00 38.06 3.16
2534 10165 3.594568 TCGGCCGTACGATGACTT 58.405 55.556 27.15 0.00 38.06 3.01
2541 10172 1.443872 GCCTATGATCGGCCGTACG 60.444 63.158 27.15 8.69 41.73 3.67
2542 10173 4.573162 GCCTATGATCGGCCGTAC 57.427 61.111 27.15 19.99 41.73 3.67
2547 10178 4.394712 CCCGGGCCTATGATCGGC 62.395 72.222 8.08 0.00 46.83 5.54
2548 10179 2.923035 ACCCGGGCCTATGATCGG 60.923 66.667 24.08 5.68 41.90 4.18
2549 10180 1.472662 AAGACCCGGGCCTATGATCG 61.473 60.000 24.08 0.00 0.00 3.69
2550 10181 0.035458 CAAGACCCGGGCCTATGATC 59.965 60.000 24.08 8.93 0.00 2.92
2551 10182 1.418908 CCAAGACCCGGGCCTATGAT 61.419 60.000 24.08 0.00 0.00 2.45
2552 10183 2.070039 CCAAGACCCGGGCCTATGA 61.070 63.158 24.08 0.00 0.00 2.15
2553 10184 2.510906 CCAAGACCCGGGCCTATG 59.489 66.667 24.08 15.57 0.00 2.23
2554 10185 2.772622 CCCAAGACCCGGGCCTAT 60.773 66.667 24.08 0.00 36.72 2.57
2560 10191 1.971695 GTGAAAGCCCAAGACCCGG 60.972 63.158 0.00 0.00 0.00 5.73
2561 10192 1.971695 GGTGAAAGCCCAAGACCCG 60.972 63.158 0.00 0.00 0.00 5.28
2562 10193 0.895559 CTGGTGAAAGCCCAAGACCC 60.896 60.000 0.00 0.00 0.00 4.46
2563 10194 0.895559 CCTGGTGAAAGCCCAAGACC 60.896 60.000 0.00 0.00 0.00 3.85
2564 10195 1.527433 GCCTGGTGAAAGCCCAAGAC 61.527 60.000 0.00 0.00 0.00 3.01
2565 10196 1.228552 GCCTGGTGAAAGCCCAAGA 60.229 57.895 0.00 0.00 0.00 3.02
2566 10197 2.278330 GGCCTGGTGAAAGCCCAAG 61.278 63.158 0.00 0.00 41.00 3.61
2567 10198 2.203625 GGCCTGGTGAAAGCCCAA 60.204 61.111 0.00 0.00 41.00 4.12
2571 10202 2.282745 AGCAGGCCTGGTGAAAGC 60.283 61.111 35.74 18.65 40.15 3.51
2572 10203 1.676967 GGAGCAGGCCTGGTGAAAG 60.677 63.158 40.65 11.25 41.93 2.62
2573 10204 0.840288 TAGGAGCAGGCCTGGTGAAA 60.840 55.000 40.65 21.99 41.93 2.69
2574 10205 0.621571 ATAGGAGCAGGCCTGGTGAA 60.622 55.000 40.65 24.75 41.93 3.18
2575 10206 1.003442 ATAGGAGCAGGCCTGGTGA 59.997 57.895 40.65 25.02 41.93 4.02
2576 10207 1.147824 CATAGGAGCAGGCCTGGTG 59.852 63.158 40.65 22.39 41.93 4.17
2577 10208 0.621571 TTCATAGGAGCAGGCCTGGT 60.622 55.000 36.72 36.72 44.89 4.00
2578 10209 0.179034 GTTCATAGGAGCAGGCCTGG 60.179 60.000 33.46 15.33 39.08 4.45
2579 10210 0.179034 GGTTCATAGGAGCAGGCCTG 60.179 60.000 29.34 29.34 39.08 4.85
2580 10211 0.327000 AGGTTCATAGGAGCAGGCCT 60.327 55.000 0.00 0.00 42.15 5.19
2581 10212 0.107643 GAGGTTCATAGGAGCAGGCC 59.892 60.000 0.00 0.00 0.00 5.19
2582 10213 0.107643 GGAGGTTCATAGGAGCAGGC 59.892 60.000 0.00 0.00 0.00 4.85
2583 10214 1.500474 TGGAGGTTCATAGGAGCAGG 58.500 55.000 0.00 0.00 0.00 4.85
2584 10215 2.971330 AGATGGAGGTTCATAGGAGCAG 59.029 50.000 0.00 0.00 0.00 4.24
2585 10216 3.051940 AGATGGAGGTTCATAGGAGCA 57.948 47.619 0.00 0.00 0.00 4.26
2586 10217 4.141620 TGAAAGATGGAGGTTCATAGGAGC 60.142 45.833 0.00 0.00 0.00 4.70
2587 10218 5.620738 TGAAAGATGGAGGTTCATAGGAG 57.379 43.478 0.00 0.00 0.00 3.69
2588 10219 6.846505 AGTATGAAAGATGGAGGTTCATAGGA 59.153 38.462 5.76 0.00 42.15 2.94
2589 10220 7.072263 AGTATGAAAGATGGAGGTTCATAGG 57.928 40.000 5.76 0.00 42.15 2.57
2590 10221 7.158021 GGAGTATGAAAGATGGAGGTTCATAG 58.842 42.308 5.76 0.00 42.15 2.23
2591 10222 6.043243 GGGAGTATGAAAGATGGAGGTTCATA 59.957 42.308 0.00 0.00 41.19 2.15
2592 10223 5.163152 GGGAGTATGAAAGATGGAGGTTCAT 60.163 44.000 3.83 3.83 42.91 2.57
2593 10224 4.164221 GGGAGTATGAAAGATGGAGGTTCA 59.836 45.833 0.00 0.00 35.83 3.18
2594 10225 4.410555 AGGGAGTATGAAAGATGGAGGTTC 59.589 45.833 0.00 0.00 0.00 3.62
2595 10226 4.375313 AGGGAGTATGAAAGATGGAGGTT 58.625 43.478 0.00 0.00 0.00 3.50
2596 10227 3.970640 GAGGGAGTATGAAAGATGGAGGT 59.029 47.826 0.00 0.00 0.00 3.85
2597 10228 3.326297 GGAGGGAGTATGAAAGATGGAGG 59.674 52.174 0.00 0.00 0.00 4.30
2598 10229 3.006323 CGGAGGGAGTATGAAAGATGGAG 59.994 52.174 0.00 0.00 0.00 3.86
2599 10230 2.965831 CGGAGGGAGTATGAAAGATGGA 59.034 50.000 0.00 0.00 0.00 3.41
2600 10231 2.700897 ACGGAGGGAGTATGAAAGATGG 59.299 50.000 0.00 0.00 0.00 3.51
2601 10232 4.408182 AACGGAGGGAGTATGAAAGATG 57.592 45.455 0.00 0.00 0.00 2.90
2602 10233 4.717280 AGAAACGGAGGGAGTATGAAAGAT 59.283 41.667 0.00 0.00 0.00 2.40
2603 10234 4.094476 AGAAACGGAGGGAGTATGAAAGA 58.906 43.478 0.00 0.00 0.00 2.52
2604 10235 4.473477 AGAAACGGAGGGAGTATGAAAG 57.527 45.455 0.00 0.00 0.00 2.62
2605 10236 4.903045 AAGAAACGGAGGGAGTATGAAA 57.097 40.909 0.00 0.00 0.00 2.69
2606 10237 4.903045 AAAGAAACGGAGGGAGTATGAA 57.097 40.909 0.00 0.00 0.00 2.57
2607 10238 4.903045 AAAAGAAACGGAGGGAGTATGA 57.097 40.909 0.00 0.00 0.00 2.15
2608 10239 6.171213 ACTAAAAAGAAACGGAGGGAGTATG 58.829 40.000 0.00 0.00 0.00 2.39
2609 10240 6.370186 ACTAAAAAGAAACGGAGGGAGTAT 57.630 37.500 0.00 0.00 0.00 2.12
2610 10241 5.813513 ACTAAAAAGAAACGGAGGGAGTA 57.186 39.130 0.00 0.00 0.00 2.59
2611 10242 4.701651 ACTAAAAAGAAACGGAGGGAGT 57.298 40.909 0.00 0.00 0.00 3.85
2612 10243 5.758924 CAAACTAAAAAGAAACGGAGGGAG 58.241 41.667 0.00 0.00 0.00 4.30
2613 10244 4.037089 GCAAACTAAAAAGAAACGGAGGGA 59.963 41.667 0.00 0.00 0.00 4.20
2614 10245 4.202070 TGCAAACTAAAAAGAAACGGAGGG 60.202 41.667 0.00 0.00 0.00 4.30
2615 10246 4.927422 TGCAAACTAAAAAGAAACGGAGG 58.073 39.130 0.00 0.00 0.00 4.30
2616 10247 9.834628 TTATATGCAAACTAAAAAGAAACGGAG 57.165 29.630 0.00 0.00 0.00 4.63
2630 10261 9.777297 ACTTTGACCAAATTTTATATGCAAACT 57.223 25.926 0.00 0.00 0.00 2.66
2632 10263 9.770097 TGACTTTGACCAAATTTTATATGCAAA 57.230 25.926 0.00 0.00 0.00 3.68
2633 10264 9.770097 TTGACTTTGACCAAATTTTATATGCAA 57.230 25.926 0.00 0.00 0.00 4.08
2634 10265 9.770097 TTTGACTTTGACCAAATTTTATATGCA 57.230 25.926 0.00 0.00 0.00 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.