Multiple sequence alignment - TraesCS2D01G535700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G535700 chr2D 100.000 3515 0 0 1 3515 618533336 618529822 0.000000e+00 6492
1 TraesCS2D01G535700 chr2D 98.232 1301 23 0 1197 2497 618645451 618646751 0.000000e+00 2276
2 TraesCS2D01G535700 chr2D 88.285 239 21 4 970 1206 618644849 618645082 2.670000e-71 279
3 TraesCS2D01G535700 chr2D 93.827 81 5 0 2691 2771 526936522 526936602 4.760000e-24 122
4 TraesCS2D01G535700 chr2D 91.860 86 5 2 2691 2776 579421545 579421462 6.160000e-23 119
5 TraesCS2D01G535700 chr2D 90.909 88 6 2 2691 2778 111321443 111321528 2.220000e-22 117
6 TraesCS2D01G535700 chr2B 93.392 1816 84 10 705 2492 755038678 755036871 0.000000e+00 2656
7 TraesCS2D01G535700 chr2B 92.349 1124 60 7 857 1958 755054420 755055539 0.000000e+00 1576
8 TraesCS2D01G535700 chr2B 95.404 544 25 0 1949 2492 755056005 755056548 0.000000e+00 867
9 TraesCS2D01G535700 chr2B 94.891 274 12 2 602 873 755054128 755054401 9.020000e-116 427
10 TraesCS2D01G535700 chr2B 93.103 87 6 0 620 706 755038845 755038759 1.020000e-25 128
11 TraesCS2D01G535700 chr2A 92.754 1863 85 20 684 2497 749523373 749525234 0.000000e+00 2647
12 TraesCS2D01G535700 chr2A 91.316 1831 112 26 764 2550 749448344 749446517 0.000000e+00 2457
13 TraesCS2D01G535700 chr2A 93.061 735 37 6 2784 3513 715088401 715089126 0.000000e+00 1062
14 TraesCS2D01G535700 chr2A 96.000 100 4 0 602 701 749523255 749523354 2.810000e-36 163
15 TraesCS2D01G535700 chr5B 90.027 1504 134 7 1004 2497 233922282 233923779 0.000000e+00 1932
16 TraesCS2D01G535700 chr5B 91.176 102 7 2 2662 2762 337029895 337029795 1.700000e-28 137
17 TraesCS2D01G535700 chr5B 89.109 101 10 1 2662 2761 645544923 645545023 1.320000e-24 124
18 TraesCS2D01G535700 chr5D 89.761 1504 138 7 1004 2497 217755034 217756531 0.000000e+00 1910
19 TraesCS2D01G535700 chr5A 89.495 1504 142 7 1004 2497 290547997 290549494 0.000000e+00 1888
20 TraesCS2D01G535700 chr4D 82.591 1505 220 17 1015 2492 115543837 115542348 0.000000e+00 1290
21 TraesCS2D01G535700 chr3B 88.962 761 51 13 2760 3515 146696872 146697604 0.000000e+00 909
22 TraesCS2D01G535700 chr7A 91.034 435 32 6 3086 3513 64552952 64553386 6.540000e-162 580
23 TraesCS2D01G535700 chr7A 94.495 109 6 0 2784 2892 64552829 64552937 6.030000e-38 169
24 TraesCS2D01G535700 chr7A 91.111 90 5 3 2691 2780 590788189 590788103 6.160000e-23 119
25 TraesCS2D01G535700 chr1D 90.000 100 6 3 2665 2761 454566567 454566469 3.680000e-25 126
26 TraesCS2D01G535700 chr6A 96.104 77 2 1 2691 2767 328091401 328091476 1.320000e-24 124
27 TraesCS2D01G535700 chr1A 91.111 90 5 3 2691 2780 451750712 451750626 6.160000e-23 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G535700 chr2D 618529822 618533336 3514 True 6492.000000 6492 100.000000 1 3515 1 chr2D.!!$R2 3514
1 TraesCS2D01G535700 chr2D 618644849 618646751 1902 False 1277.500000 2276 93.258500 970 2497 2 chr2D.!!$F3 1527
2 TraesCS2D01G535700 chr2B 755036871 755038845 1974 True 1392.000000 2656 93.247500 620 2492 2 chr2B.!!$R1 1872
3 TraesCS2D01G535700 chr2B 755054128 755056548 2420 False 956.666667 1576 94.214667 602 2492 3 chr2B.!!$F1 1890
4 TraesCS2D01G535700 chr2A 749446517 749448344 1827 True 2457.000000 2457 91.316000 764 2550 1 chr2A.!!$R1 1786
5 TraesCS2D01G535700 chr2A 749523255 749525234 1979 False 1405.000000 2647 94.377000 602 2497 2 chr2A.!!$F2 1895
6 TraesCS2D01G535700 chr2A 715088401 715089126 725 False 1062.000000 1062 93.061000 2784 3513 1 chr2A.!!$F1 729
7 TraesCS2D01G535700 chr5B 233922282 233923779 1497 False 1932.000000 1932 90.027000 1004 2497 1 chr5B.!!$F1 1493
8 TraesCS2D01G535700 chr5D 217755034 217756531 1497 False 1910.000000 1910 89.761000 1004 2497 1 chr5D.!!$F1 1493
9 TraesCS2D01G535700 chr5A 290547997 290549494 1497 False 1888.000000 1888 89.495000 1004 2497 1 chr5A.!!$F1 1493
10 TraesCS2D01G535700 chr4D 115542348 115543837 1489 True 1290.000000 1290 82.591000 1015 2492 1 chr4D.!!$R1 1477
11 TraesCS2D01G535700 chr3B 146696872 146697604 732 False 909.000000 909 88.962000 2760 3515 1 chr3B.!!$F1 755
12 TraesCS2D01G535700 chr7A 64552829 64553386 557 False 374.500000 580 92.764500 2784 3513 2 chr7A.!!$F1 729

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
343 344 0.033504 ATCACTCTCGTGGTTGCGTT 59.966 50.0 0.0 0.0 41.53 4.84 F
351 352 0.040781 CGTGGTTGCGTTCCGAAAAT 60.041 50.0 0.0 0.0 0.00 1.82 F
357 358 0.236187 TGCGTTCCGAAAATCAACCG 59.764 50.0 0.0 0.0 0.00 4.44 F
993 1174 0.247736 ACTCGTGAGCAACTCATCCC 59.752 55.0 0.0 0.0 42.73 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1365 1929 1.683790 CGTCGACGTTGAAGATGCCC 61.684 60.000 29.08 0.0 34.11 5.36 R
2289 3355 2.235402 CTGGAACACCGGGTACTTGTAT 59.765 50.000 6.32 0.0 0.00 2.29 R
2376 3442 1.300620 CTCGAACGCCTTCACCACA 60.301 57.895 0.00 0.0 0.00 4.17 R
2664 3740 0.038744 AGTTCCGAACGGAGGGAGTA 59.961 55.000 15.34 0.0 46.06 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.125952 CATGACCACAGCGCGAGA 60.126 61.111 12.10 0.00 0.00 4.04
18 19 1.737735 CATGACCACAGCGCGAGAA 60.738 57.895 12.10 0.00 0.00 2.87
19 20 1.005037 ATGACCACAGCGCGAGAAA 60.005 52.632 12.10 0.00 0.00 2.52
20 21 0.602638 ATGACCACAGCGCGAGAAAA 60.603 50.000 12.10 0.00 0.00 2.29
21 22 1.221466 TGACCACAGCGCGAGAAAAG 61.221 55.000 12.10 0.00 0.00 2.27
22 23 1.901650 GACCACAGCGCGAGAAAAGG 61.902 60.000 12.10 5.68 0.00 3.11
23 24 1.667830 CCACAGCGCGAGAAAAGGA 60.668 57.895 12.10 0.00 0.00 3.36
24 25 1.227999 CCACAGCGCGAGAAAAGGAA 61.228 55.000 12.10 0.00 0.00 3.36
25 26 0.164647 CACAGCGCGAGAAAAGGAAG 59.835 55.000 12.10 0.00 0.00 3.46
26 27 0.249911 ACAGCGCGAGAAAAGGAAGT 60.250 50.000 12.10 0.00 0.00 3.01
27 28 0.868406 CAGCGCGAGAAAAGGAAGTT 59.132 50.000 12.10 0.00 0.00 2.66
28 29 2.066262 CAGCGCGAGAAAAGGAAGTTA 58.934 47.619 12.10 0.00 0.00 2.24
29 30 2.478894 CAGCGCGAGAAAAGGAAGTTAA 59.521 45.455 12.10 0.00 0.00 2.01
30 31 3.059188 CAGCGCGAGAAAAGGAAGTTAAA 60.059 43.478 12.10 0.00 0.00 1.52
31 32 3.059120 AGCGCGAGAAAAGGAAGTTAAAC 60.059 43.478 12.10 0.00 0.00 2.01
32 33 3.059120 GCGCGAGAAAAGGAAGTTAAACT 60.059 43.478 12.10 0.00 0.00 2.66
33 34 4.455124 CGCGAGAAAAGGAAGTTAAACTG 58.545 43.478 0.00 0.00 0.00 3.16
34 35 4.025145 CGCGAGAAAAGGAAGTTAAACTGT 60.025 41.667 0.00 0.00 0.00 3.55
35 36 5.503520 CGCGAGAAAAGGAAGTTAAACTGTT 60.504 40.000 0.00 0.00 0.00 3.16
36 37 6.263344 GCGAGAAAAGGAAGTTAAACTGTTT 58.737 36.000 10.98 10.98 0.00 2.83
37 38 6.414109 GCGAGAAAAGGAAGTTAAACTGTTTC 59.586 38.462 9.38 0.00 0.00 2.78
38 39 6.627671 CGAGAAAAGGAAGTTAAACTGTTTCG 59.372 38.462 9.38 0.00 0.00 3.46
39 40 7.387119 AGAAAAGGAAGTTAAACTGTTTCGT 57.613 32.000 9.38 0.00 0.00 3.85
40 41 7.248437 AGAAAAGGAAGTTAAACTGTTTCGTG 58.752 34.615 9.38 0.00 0.00 4.35
41 42 6.505044 AAAGGAAGTTAAACTGTTTCGTGT 57.495 33.333 9.38 0.00 0.00 4.49
42 43 5.729974 AGGAAGTTAAACTGTTTCGTGTC 57.270 39.130 9.38 4.09 0.00 3.67
43 44 4.269363 AGGAAGTTAAACTGTTTCGTGTCG 59.731 41.667 9.38 0.00 0.00 4.35
44 45 4.511734 GAAGTTAAACTGTTTCGTGTCGG 58.488 43.478 9.38 0.00 0.00 4.79
45 46 2.867975 AGTTAAACTGTTTCGTGTCGGG 59.132 45.455 9.38 0.00 0.00 5.14
46 47 1.219646 TAAACTGTTTCGTGTCGGGC 58.780 50.000 9.38 0.00 0.00 6.13
47 48 1.441732 AAACTGTTTCGTGTCGGGCC 61.442 55.000 0.00 0.00 0.00 5.80
48 49 2.280524 CTGTTTCGTGTCGGGCCA 60.281 61.111 4.39 0.00 0.00 5.36
49 50 2.589442 TGTTTCGTGTCGGGCCAC 60.589 61.111 4.39 1.32 0.00 5.01
63 64 4.389576 CCACGCCGCAGCAACTTC 62.390 66.667 0.00 0.00 39.83 3.01
64 65 3.648982 CACGCCGCAGCAACTTCA 61.649 61.111 0.00 0.00 39.83 3.02
65 66 3.649986 ACGCCGCAGCAACTTCAC 61.650 61.111 0.00 0.00 39.83 3.18
66 67 3.349006 CGCCGCAGCAACTTCACT 61.349 61.111 0.00 0.00 39.83 3.41
67 68 2.896801 CGCCGCAGCAACTTCACTT 61.897 57.895 0.00 0.00 39.83 3.16
68 69 1.081840 GCCGCAGCAACTTCACTTC 60.082 57.895 0.00 0.00 39.53 3.01
69 70 1.510480 GCCGCAGCAACTTCACTTCT 61.510 55.000 0.00 0.00 39.53 2.85
70 71 0.947244 CCGCAGCAACTTCACTTCTT 59.053 50.000 0.00 0.00 0.00 2.52
71 72 1.069636 CCGCAGCAACTTCACTTCTTC 60.070 52.381 0.00 0.00 0.00 2.87
72 73 1.869767 CGCAGCAACTTCACTTCTTCT 59.130 47.619 0.00 0.00 0.00 2.85
73 74 2.096516 CGCAGCAACTTCACTTCTTCTC 60.097 50.000 0.00 0.00 0.00 2.87
74 75 2.874701 GCAGCAACTTCACTTCTTCTCA 59.125 45.455 0.00 0.00 0.00 3.27
75 76 3.059051 GCAGCAACTTCACTTCTTCTCAG 60.059 47.826 0.00 0.00 0.00 3.35
76 77 3.059051 CAGCAACTTCACTTCTTCTCAGC 60.059 47.826 0.00 0.00 0.00 4.26
77 78 3.137533 GCAACTTCACTTCTTCTCAGCT 58.862 45.455 0.00 0.00 0.00 4.24
78 79 4.039730 AGCAACTTCACTTCTTCTCAGCTA 59.960 41.667 0.00 0.00 0.00 3.32
79 80 4.388469 GCAACTTCACTTCTTCTCAGCTAG 59.612 45.833 0.00 0.00 0.00 3.42
80 81 4.186856 ACTTCACTTCTTCTCAGCTAGC 57.813 45.455 6.62 6.62 0.00 3.42
81 82 3.056179 ACTTCACTTCTTCTCAGCTAGCC 60.056 47.826 12.13 0.00 0.00 3.93
82 83 2.813907 TCACTTCTTCTCAGCTAGCCT 58.186 47.619 12.13 0.00 0.00 4.58
83 84 2.495270 TCACTTCTTCTCAGCTAGCCTG 59.505 50.000 12.13 9.38 43.17 4.85
84 85 2.233431 CACTTCTTCTCAGCTAGCCTGT 59.767 50.000 12.13 0.00 42.38 4.00
85 86 3.445450 CACTTCTTCTCAGCTAGCCTGTA 59.555 47.826 12.13 0.28 42.38 2.74
86 87 4.099266 CACTTCTTCTCAGCTAGCCTGTAT 59.901 45.833 12.13 0.00 42.38 2.29
87 88 4.340950 ACTTCTTCTCAGCTAGCCTGTATC 59.659 45.833 12.13 0.00 42.38 2.24
88 89 2.881513 TCTTCTCAGCTAGCCTGTATCG 59.118 50.000 12.13 0.00 42.38 2.92
89 90 1.610363 TCTCAGCTAGCCTGTATCGG 58.390 55.000 12.13 0.00 42.38 4.18
90 91 1.133761 TCTCAGCTAGCCTGTATCGGT 60.134 52.381 12.13 0.00 42.38 4.69
91 92 1.000827 CTCAGCTAGCCTGTATCGGTG 60.001 57.143 12.13 0.00 42.38 4.94
92 93 0.598680 CAGCTAGCCTGTATCGGTGC 60.599 60.000 12.13 0.00 36.79 5.01
93 94 0.757188 AGCTAGCCTGTATCGGTGCT 60.757 55.000 12.13 0.00 37.84 4.40
94 95 0.598680 GCTAGCCTGTATCGGTGCTG 60.599 60.000 2.29 0.00 35.34 4.41
95 96 0.747255 CTAGCCTGTATCGGTGCTGT 59.253 55.000 0.00 0.00 35.34 4.40
96 97 0.459899 TAGCCTGTATCGGTGCTGTG 59.540 55.000 0.00 0.00 35.34 3.66
97 98 1.815421 GCCTGTATCGGTGCTGTGG 60.815 63.158 0.00 0.00 0.00 4.17
98 99 1.897423 CCTGTATCGGTGCTGTGGA 59.103 57.895 0.00 0.00 0.00 4.02
99 100 0.179100 CCTGTATCGGTGCTGTGGAG 60.179 60.000 0.00 0.00 0.00 3.86
100 101 0.817654 CTGTATCGGTGCTGTGGAGA 59.182 55.000 0.00 0.00 0.00 3.71
101 102 1.204704 CTGTATCGGTGCTGTGGAGAA 59.795 52.381 0.00 0.00 0.00 2.87
102 103 1.204704 TGTATCGGTGCTGTGGAGAAG 59.795 52.381 0.00 0.00 0.00 2.85
103 104 1.476891 GTATCGGTGCTGTGGAGAAGA 59.523 52.381 0.00 0.00 0.00 2.87
104 105 1.198713 ATCGGTGCTGTGGAGAAGAT 58.801 50.000 0.00 0.00 0.00 2.40
105 106 0.247460 TCGGTGCTGTGGAGAAGATG 59.753 55.000 0.00 0.00 0.00 2.90
106 107 0.036952 CGGTGCTGTGGAGAAGATGT 60.037 55.000 0.00 0.00 0.00 3.06
107 108 1.609061 CGGTGCTGTGGAGAAGATGTT 60.609 52.381 0.00 0.00 0.00 2.71
108 109 2.508526 GGTGCTGTGGAGAAGATGTTT 58.491 47.619 0.00 0.00 0.00 2.83
109 110 3.674997 GGTGCTGTGGAGAAGATGTTTA 58.325 45.455 0.00 0.00 0.00 2.01
110 111 4.265073 GGTGCTGTGGAGAAGATGTTTAT 58.735 43.478 0.00 0.00 0.00 1.40
111 112 4.702131 GGTGCTGTGGAGAAGATGTTTATT 59.298 41.667 0.00 0.00 0.00 1.40
112 113 5.163713 GGTGCTGTGGAGAAGATGTTTATTC 60.164 44.000 0.00 0.00 0.00 1.75
113 114 4.943705 TGCTGTGGAGAAGATGTTTATTCC 59.056 41.667 0.00 0.00 0.00 3.01
114 115 4.943705 GCTGTGGAGAAGATGTTTATTCCA 59.056 41.667 1.78 1.78 32.62 3.53
115 116 5.065731 GCTGTGGAGAAGATGTTTATTCCAG 59.934 44.000 5.14 0.00 35.55 3.86
116 117 5.500234 TGTGGAGAAGATGTTTATTCCAGG 58.500 41.667 5.14 0.00 35.55 4.45
117 118 5.250543 TGTGGAGAAGATGTTTATTCCAGGA 59.749 40.000 5.14 0.00 35.55 3.86
118 119 6.180472 GTGGAGAAGATGTTTATTCCAGGAA 58.820 40.000 3.72 3.72 35.55 3.36
119 120 6.659242 GTGGAGAAGATGTTTATTCCAGGAAA 59.341 38.462 5.81 0.00 35.55 3.13
120 121 7.340487 GTGGAGAAGATGTTTATTCCAGGAAAT 59.660 37.037 5.81 0.00 35.55 2.17
121 122 7.895429 TGGAGAAGATGTTTATTCCAGGAAATT 59.105 33.333 5.81 0.00 31.50 1.82
122 123 8.753133 GGAGAAGATGTTTATTCCAGGAAATTT 58.247 33.333 5.81 0.00 0.00 1.82
153 154 5.311016 CGTACATATAACGCCTTTGAGTG 57.689 43.478 0.00 0.00 33.04 3.51
154 155 4.802039 CGTACATATAACGCCTTTGAGTGT 59.198 41.667 0.00 0.00 33.04 3.55
155 156 5.290158 CGTACATATAACGCCTTTGAGTGTT 59.710 40.000 0.00 0.00 42.78 3.32
156 157 6.473131 CGTACATATAACGCCTTTGAGTGTTA 59.527 38.462 0.00 0.69 44.38 2.41
157 158 7.009448 CGTACATATAACGCCTTTGAGTGTTAA 59.991 37.037 2.22 0.00 43.71 2.01
158 159 7.675962 ACATATAACGCCTTTGAGTGTTAAA 57.324 32.000 2.22 0.00 43.71 1.52
159 160 8.101654 ACATATAACGCCTTTGAGTGTTAAAA 57.898 30.769 2.22 0.00 43.71 1.52
160 161 8.736244 ACATATAACGCCTTTGAGTGTTAAAAT 58.264 29.630 2.22 0.00 43.71 1.82
161 162 9.009327 CATATAACGCCTTTGAGTGTTAAAATG 57.991 33.333 2.22 5.84 43.71 2.32
162 163 3.638484 ACGCCTTTGAGTGTTAAAATGC 58.362 40.909 0.00 0.00 0.00 3.56
163 164 3.067461 ACGCCTTTGAGTGTTAAAATGCA 59.933 39.130 0.00 0.00 30.26 3.96
164 165 4.236935 CGCCTTTGAGTGTTAAAATGCAT 58.763 39.130 0.00 0.00 30.26 3.96
165 166 5.048364 ACGCCTTTGAGTGTTAAAATGCATA 60.048 36.000 0.00 0.00 30.26 3.14
166 167 5.286082 CGCCTTTGAGTGTTAAAATGCATAC 59.714 40.000 0.00 0.00 30.26 2.39
167 168 6.389906 GCCTTTGAGTGTTAAAATGCATACT 58.610 36.000 0.00 0.00 30.26 2.12
168 169 6.868339 GCCTTTGAGTGTTAAAATGCATACTT 59.132 34.615 0.00 0.00 30.26 2.24
169 170 7.148755 GCCTTTGAGTGTTAAAATGCATACTTG 60.149 37.037 0.00 0.00 30.26 3.16
170 171 7.867403 CCTTTGAGTGTTAAAATGCATACTTGT 59.133 33.333 0.00 0.00 0.00 3.16
171 172 9.891828 CTTTGAGTGTTAAAATGCATACTTGTA 57.108 29.630 0.00 0.00 0.00 2.41
182 183 9.533253 AAAATGCATACTTGTAATTATGAAGGC 57.467 29.630 0.00 6.26 0.00 4.35
183 184 6.299023 TGCATACTTGTAATTATGAAGGCG 57.701 37.500 10.39 0.00 0.00 5.52
184 185 5.820423 TGCATACTTGTAATTATGAAGGCGT 59.180 36.000 10.39 0.00 0.00 5.68
185 186 6.317642 TGCATACTTGTAATTATGAAGGCGTT 59.682 34.615 10.39 0.00 0.00 4.84
186 187 7.496263 TGCATACTTGTAATTATGAAGGCGTTA 59.504 33.333 10.39 0.00 0.00 3.18
187 188 8.009974 GCATACTTGTAATTATGAAGGCGTTAG 58.990 37.037 10.39 0.00 0.00 2.34
188 189 9.042008 CATACTTGTAATTATGAAGGCGTTAGT 57.958 33.333 10.39 0.00 0.00 2.24
189 190 7.535489 ACTTGTAATTATGAAGGCGTTAGTC 57.465 36.000 10.39 0.00 0.00 2.59
190 191 7.101054 ACTTGTAATTATGAAGGCGTTAGTCA 58.899 34.615 10.39 0.00 0.00 3.41
191 192 7.604927 ACTTGTAATTATGAAGGCGTTAGTCAA 59.395 33.333 10.39 0.00 0.00 3.18
192 193 7.908827 TGTAATTATGAAGGCGTTAGTCAAA 57.091 32.000 0.00 0.00 0.00 2.69
193 194 8.500753 TGTAATTATGAAGGCGTTAGTCAAAT 57.499 30.769 0.00 0.00 0.00 2.32
194 195 8.952278 TGTAATTATGAAGGCGTTAGTCAAATT 58.048 29.630 0.00 0.00 0.00 1.82
195 196 9.783256 GTAATTATGAAGGCGTTAGTCAAATTT 57.217 29.630 0.00 0.00 0.00 1.82
197 198 9.705290 AATTATGAAGGCGTTAGTCAAATTTTT 57.295 25.926 0.00 0.00 0.00 1.94
199 200 9.834628 TTATGAAGGCGTTAGTCAAATTTTTAG 57.165 29.630 0.00 0.00 0.00 1.85
200 201 6.146898 TGAAGGCGTTAGTCAAATTTTTAGC 58.853 36.000 0.00 0.00 0.00 3.09
201 202 5.055642 AGGCGTTAGTCAAATTTTTAGCC 57.944 39.130 0.00 0.00 40.97 3.93
202 203 3.849708 GGCGTTAGTCAAATTTTTAGCCG 59.150 43.478 0.00 0.00 0.00 5.52
203 204 4.469552 GCGTTAGTCAAATTTTTAGCCGT 58.530 39.130 0.00 0.00 0.00 5.68
204 205 4.552276 GCGTTAGTCAAATTTTTAGCCGTC 59.448 41.667 0.00 0.00 0.00 4.79
205 206 5.084055 CGTTAGTCAAATTTTTAGCCGTCC 58.916 41.667 0.00 0.00 0.00 4.79
206 207 3.824414 AGTCAAATTTTTAGCCGTCCG 57.176 42.857 0.00 0.00 0.00 4.79
207 208 3.404899 AGTCAAATTTTTAGCCGTCCGA 58.595 40.909 0.00 0.00 0.00 4.55
208 209 4.007659 AGTCAAATTTTTAGCCGTCCGAT 58.992 39.130 0.00 0.00 0.00 4.18
209 210 4.094442 AGTCAAATTTTTAGCCGTCCGATC 59.906 41.667 0.00 0.00 0.00 3.69
210 211 4.094442 GTCAAATTTTTAGCCGTCCGATCT 59.906 41.667 0.00 0.00 0.00 2.75
211 212 4.331717 TCAAATTTTTAGCCGTCCGATCTC 59.668 41.667 0.00 0.00 0.00 2.75
212 213 3.536956 ATTTTTAGCCGTCCGATCTCA 57.463 42.857 0.00 0.00 0.00 3.27
213 214 3.322211 TTTTTAGCCGTCCGATCTCAA 57.678 42.857 0.00 0.00 0.00 3.02
214 215 3.536956 TTTTAGCCGTCCGATCTCAAT 57.463 42.857 0.00 0.00 0.00 2.57
215 216 2.795175 TTAGCCGTCCGATCTCAATC 57.205 50.000 0.00 0.00 0.00 2.67
216 217 0.959553 TAGCCGTCCGATCTCAATCC 59.040 55.000 0.00 0.00 0.00 3.01
217 218 1.043116 AGCCGTCCGATCTCAATCCA 61.043 55.000 0.00 0.00 0.00 3.41
218 219 0.179084 GCCGTCCGATCTCAATCCAA 60.179 55.000 0.00 0.00 0.00 3.53
219 220 1.541233 GCCGTCCGATCTCAATCCAAT 60.541 52.381 0.00 0.00 0.00 3.16
220 221 2.138320 CCGTCCGATCTCAATCCAATG 58.862 52.381 0.00 0.00 0.00 2.82
221 222 2.138320 CGTCCGATCTCAATCCAATGG 58.862 52.381 0.00 0.00 0.00 3.16
222 223 2.483714 CGTCCGATCTCAATCCAATGGT 60.484 50.000 0.00 0.00 0.00 3.55
223 224 3.545703 GTCCGATCTCAATCCAATGGTT 58.454 45.455 0.00 0.00 0.00 3.67
224 225 3.313526 GTCCGATCTCAATCCAATGGTTG 59.686 47.826 0.00 3.81 0.00 3.77
225 226 3.054434 TCCGATCTCAATCCAATGGTTGT 60.054 43.478 0.00 0.00 0.00 3.32
226 227 3.696051 CCGATCTCAATCCAATGGTTGTT 59.304 43.478 0.00 0.00 0.00 2.83
227 228 4.439153 CCGATCTCAATCCAATGGTTGTTG 60.439 45.833 0.00 4.01 0.00 3.33
228 229 4.156556 CGATCTCAATCCAATGGTTGTTGT 59.843 41.667 0.00 0.00 0.00 3.32
229 230 5.335897 CGATCTCAATCCAATGGTTGTTGTT 60.336 40.000 0.00 0.00 0.00 2.83
230 231 5.867903 TCTCAATCCAATGGTTGTTGTTT 57.132 34.783 0.00 0.00 0.00 2.83
231 232 6.232581 TCTCAATCCAATGGTTGTTGTTTT 57.767 33.333 0.00 0.00 0.00 2.43
232 233 6.648192 TCTCAATCCAATGGTTGTTGTTTTT 58.352 32.000 0.00 0.00 0.00 1.94
252 253 5.437191 TTTTCTCCTCCCTATCACTTTCC 57.563 43.478 0.00 0.00 0.00 3.13
253 254 4.354208 TTCTCCTCCCTATCACTTTCCT 57.646 45.455 0.00 0.00 0.00 3.36
254 255 3.917300 TCTCCTCCCTATCACTTTCCTC 58.083 50.000 0.00 0.00 0.00 3.71
255 256 2.969262 CTCCTCCCTATCACTTTCCTCC 59.031 54.545 0.00 0.00 0.00 4.30
256 257 2.317900 TCCTCCCTATCACTTTCCTCCA 59.682 50.000 0.00 0.00 0.00 3.86
257 258 2.703007 CCTCCCTATCACTTTCCTCCAG 59.297 54.545 0.00 0.00 0.00 3.86
258 259 2.103941 CTCCCTATCACTTTCCTCCAGC 59.896 54.545 0.00 0.00 0.00 4.85
259 260 1.141858 CCCTATCACTTTCCTCCAGCC 59.858 57.143 0.00 0.00 0.00 4.85
260 261 2.122768 CCTATCACTTTCCTCCAGCCT 58.877 52.381 0.00 0.00 0.00 4.58
261 262 2.103941 CCTATCACTTTCCTCCAGCCTC 59.896 54.545 0.00 0.00 0.00 4.70
262 263 0.915364 ATCACTTTCCTCCAGCCTCC 59.085 55.000 0.00 0.00 0.00 4.30
263 264 0.178891 TCACTTTCCTCCAGCCTCCT 60.179 55.000 0.00 0.00 0.00 3.69
264 265 0.695347 CACTTTCCTCCAGCCTCCTT 59.305 55.000 0.00 0.00 0.00 3.36
265 266 0.988063 ACTTTCCTCCAGCCTCCTTC 59.012 55.000 0.00 0.00 0.00 3.46
266 267 0.254462 CTTTCCTCCAGCCTCCTTCC 59.746 60.000 0.00 0.00 0.00 3.46
267 268 0.475632 TTTCCTCCAGCCTCCTTCCA 60.476 55.000 0.00 0.00 0.00 3.53
268 269 0.475632 TTCCTCCAGCCTCCTTCCAA 60.476 55.000 0.00 0.00 0.00 3.53
269 270 1.201429 TCCTCCAGCCTCCTTCCAAC 61.201 60.000 0.00 0.00 0.00 3.77
270 271 1.301293 CTCCAGCCTCCTTCCAACC 59.699 63.158 0.00 0.00 0.00 3.77
271 272 2.203549 CTCCAGCCTCCTTCCAACCC 62.204 65.000 0.00 0.00 0.00 4.11
272 273 2.538141 CCAGCCTCCTTCCAACCCA 61.538 63.158 0.00 0.00 0.00 4.51
273 274 1.693640 CAGCCTCCTTCCAACCCAT 59.306 57.895 0.00 0.00 0.00 4.00
274 275 0.682209 CAGCCTCCTTCCAACCCATG 60.682 60.000 0.00 0.00 0.00 3.66
275 276 1.142688 AGCCTCCTTCCAACCCATGT 61.143 55.000 0.00 0.00 0.00 3.21
276 277 0.681243 GCCTCCTTCCAACCCATGTC 60.681 60.000 0.00 0.00 0.00 3.06
277 278 0.392998 CCTCCTTCCAACCCATGTCG 60.393 60.000 0.00 0.00 0.00 4.35
278 279 0.392998 CTCCTTCCAACCCATGTCGG 60.393 60.000 0.00 0.00 0.00 4.79
296 297 2.822399 GCCGCCTGCCTACATAGT 59.178 61.111 0.00 0.00 0.00 2.12
297 298 1.301009 GCCGCCTGCCTACATAGTC 60.301 63.158 0.00 0.00 0.00 2.59
298 299 1.007271 CCGCCTGCCTACATAGTCG 60.007 63.158 0.00 0.00 0.00 4.18
299 300 1.007271 CGCCTGCCTACATAGTCGG 60.007 63.158 0.00 0.00 0.00 4.79
300 301 1.367840 GCCTGCCTACATAGTCGGG 59.632 63.158 0.00 0.00 0.00 5.14
301 302 1.113517 GCCTGCCTACATAGTCGGGA 61.114 60.000 0.00 0.00 0.00 5.14
302 303 0.962489 CCTGCCTACATAGTCGGGAG 59.038 60.000 2.82 2.82 36.78 4.30
303 304 0.315568 CTGCCTACATAGTCGGGAGC 59.684 60.000 0.00 0.00 31.22 4.70
304 305 1.286260 GCCTACATAGTCGGGAGCG 59.714 63.158 0.00 0.00 0.00 5.03
305 306 1.286260 CCTACATAGTCGGGAGCGC 59.714 63.158 0.00 0.00 0.00 5.92
306 307 1.452953 CCTACATAGTCGGGAGCGCA 61.453 60.000 11.47 0.00 0.00 6.09
307 308 0.039978 CTACATAGTCGGGAGCGCAG 60.040 60.000 11.47 0.00 0.00 5.18
322 323 4.688419 CAGCCGCGTGCCTTGTTG 62.688 66.667 14.64 4.17 42.71 3.33
325 326 4.041917 CCGCGTGCCTTGTTGCAT 62.042 61.111 4.92 0.00 44.30 3.96
326 327 2.502510 CGCGTGCCTTGTTGCATC 60.503 61.111 0.00 0.00 44.30 3.91
327 328 2.644418 GCGTGCCTTGTTGCATCA 59.356 55.556 0.00 0.00 44.30 3.07
328 329 1.730547 GCGTGCCTTGTTGCATCAC 60.731 57.895 0.00 0.00 44.30 3.06
329 330 1.951510 CGTGCCTTGTTGCATCACT 59.048 52.632 0.00 0.00 44.30 3.41
330 331 0.110056 CGTGCCTTGTTGCATCACTC 60.110 55.000 0.00 0.00 44.30 3.51
331 332 1.242076 GTGCCTTGTTGCATCACTCT 58.758 50.000 0.00 0.00 44.30 3.24
332 333 1.198637 GTGCCTTGTTGCATCACTCTC 59.801 52.381 0.00 0.00 44.30 3.20
333 334 0.445436 GCCTTGTTGCATCACTCTCG 59.555 55.000 0.00 0.00 0.00 4.04
334 335 1.800805 CCTTGTTGCATCACTCTCGT 58.199 50.000 0.00 0.00 0.00 4.18
335 336 1.462283 CCTTGTTGCATCACTCTCGTG 59.538 52.381 0.00 0.00 42.59 4.35
336 337 1.462283 CTTGTTGCATCACTCTCGTGG 59.538 52.381 0.00 0.00 41.53 4.94
337 338 0.392706 TGTTGCATCACTCTCGTGGT 59.607 50.000 0.00 0.00 41.53 4.16
338 339 1.202639 TGTTGCATCACTCTCGTGGTT 60.203 47.619 0.00 0.00 41.53 3.67
339 340 1.195448 GTTGCATCACTCTCGTGGTTG 59.805 52.381 0.00 0.00 41.53 3.77
340 341 0.950555 TGCATCACTCTCGTGGTTGC 60.951 55.000 11.62 11.62 44.11 4.17
341 342 1.959899 GCATCACTCTCGTGGTTGCG 61.960 60.000 0.00 0.00 41.53 4.85
342 343 0.667487 CATCACTCTCGTGGTTGCGT 60.667 55.000 0.00 0.00 41.53 5.24
343 344 0.033504 ATCACTCTCGTGGTTGCGTT 59.966 50.000 0.00 0.00 41.53 4.84
344 345 0.596600 TCACTCTCGTGGTTGCGTTC 60.597 55.000 0.00 0.00 41.53 3.95
345 346 1.300697 ACTCTCGTGGTTGCGTTCC 60.301 57.895 0.00 0.00 0.00 3.62
346 347 2.355363 TCTCGTGGTTGCGTTCCG 60.355 61.111 0.00 0.00 0.00 4.30
347 348 2.355363 CTCGTGGTTGCGTTCCGA 60.355 61.111 0.00 0.00 0.00 4.55
348 349 1.952133 CTCGTGGTTGCGTTCCGAA 60.952 57.895 0.00 0.00 0.00 4.30
349 350 1.492319 CTCGTGGTTGCGTTCCGAAA 61.492 55.000 0.00 0.00 0.00 3.46
350 351 1.088340 TCGTGGTTGCGTTCCGAAAA 61.088 50.000 0.00 0.00 0.00 2.29
351 352 0.040781 CGTGGTTGCGTTCCGAAAAT 60.041 50.000 0.00 0.00 0.00 1.82
352 353 1.681825 GTGGTTGCGTTCCGAAAATC 58.318 50.000 0.00 0.00 0.00 2.17
353 354 1.002251 GTGGTTGCGTTCCGAAAATCA 60.002 47.619 0.00 0.00 0.00 2.57
354 355 1.676529 TGGTTGCGTTCCGAAAATCAA 59.323 42.857 0.00 0.00 0.00 2.57
355 356 2.048498 GGTTGCGTTCCGAAAATCAAC 58.952 47.619 10.55 10.55 34.68 3.18
356 357 2.048498 GTTGCGTTCCGAAAATCAACC 58.952 47.619 8.88 0.00 0.00 3.77
357 358 0.236187 TGCGTTCCGAAAATCAACCG 59.764 50.000 0.00 0.00 0.00 4.44
358 359 0.513820 GCGTTCCGAAAATCAACCGA 59.486 50.000 0.00 0.00 0.00 4.69
359 360 1.723701 GCGTTCCGAAAATCAACCGAC 60.724 52.381 0.00 0.00 0.00 4.79
360 361 1.527736 CGTTCCGAAAATCAACCGACA 59.472 47.619 0.00 0.00 0.00 4.35
361 362 2.660900 CGTTCCGAAAATCAACCGACAC 60.661 50.000 0.00 0.00 0.00 3.67
362 363 1.141645 TCCGAAAATCAACCGACACG 58.858 50.000 0.00 0.00 0.00 4.49
363 364 1.141645 CCGAAAATCAACCGACACGA 58.858 50.000 0.00 0.00 0.00 4.35
364 365 1.527736 CCGAAAATCAACCGACACGAA 59.472 47.619 0.00 0.00 0.00 3.85
365 366 2.158841 CCGAAAATCAACCGACACGAAT 59.841 45.455 0.00 0.00 0.00 3.34
366 367 3.364565 CCGAAAATCAACCGACACGAATT 60.365 43.478 0.00 0.00 0.00 2.17
367 368 3.597825 CGAAAATCAACCGACACGAATTG 59.402 43.478 0.00 0.00 0.00 2.32
368 369 2.611974 AATCAACCGACACGAATTGC 57.388 45.000 0.00 0.00 0.00 3.56
369 370 1.518325 ATCAACCGACACGAATTGCA 58.482 45.000 0.00 0.00 0.00 4.08
370 371 1.300481 TCAACCGACACGAATTGCAA 58.700 45.000 0.00 0.00 0.00 4.08
371 372 1.671328 TCAACCGACACGAATTGCAAA 59.329 42.857 1.71 0.00 0.00 3.68
372 373 2.292016 TCAACCGACACGAATTGCAAAT 59.708 40.909 1.71 0.00 0.00 2.32
373 374 3.049206 CAACCGACACGAATTGCAAATT 58.951 40.909 1.71 0.00 0.00 1.82
374 375 2.928694 ACCGACACGAATTGCAAATTC 58.071 42.857 1.71 7.33 0.00 2.17
375 376 2.292016 ACCGACACGAATTGCAAATTCA 59.708 40.909 1.71 0.00 0.00 2.57
376 377 2.910482 CCGACACGAATTGCAAATTCAG 59.090 45.455 1.71 6.41 0.00 3.02
377 378 2.910482 CGACACGAATTGCAAATTCAGG 59.090 45.455 1.71 5.77 0.00 3.86
378 379 2.663119 GACACGAATTGCAAATTCAGGC 59.337 45.455 1.71 2.71 0.00 4.85
379 380 2.035704 ACACGAATTGCAAATTCAGGCA 59.964 40.909 1.71 0.00 38.46 4.75
397 398 3.861840 GGCAACTTGCTAGTATCAGACA 58.138 45.455 13.43 0.00 44.28 3.41
398 399 4.446371 GGCAACTTGCTAGTATCAGACAT 58.554 43.478 13.43 0.00 44.28 3.06
399 400 4.272018 GGCAACTTGCTAGTATCAGACATG 59.728 45.833 13.43 0.00 44.28 3.21
400 401 5.111989 GCAACTTGCTAGTATCAGACATGA 58.888 41.667 6.50 0.00 40.96 3.07
401 402 5.582269 GCAACTTGCTAGTATCAGACATGAA 59.418 40.000 6.50 0.00 40.96 2.57
402 403 6.092670 GCAACTTGCTAGTATCAGACATGAAA 59.907 38.462 6.50 0.00 40.96 2.69
403 404 7.361201 GCAACTTGCTAGTATCAGACATGAAAA 60.361 37.037 6.50 0.00 40.96 2.29
404 405 8.506437 CAACTTGCTAGTATCAGACATGAAAAA 58.494 33.333 0.00 0.00 34.25 1.94
426 427 3.898005 AAAACACAAAATGCGAACACG 57.102 38.095 0.00 0.00 0.00 4.49
427 428 1.833860 AACACAAAATGCGAACACGG 58.166 45.000 0.00 0.00 0.00 4.94
428 429 1.018148 ACACAAAATGCGAACACGGA 58.982 45.000 0.00 0.00 0.00 4.69
429 430 1.002900 ACACAAAATGCGAACACGGAG 60.003 47.619 0.00 0.00 0.00 4.63
431 432 2.222213 CACAAAATGCGAACACGGAGTA 59.778 45.455 0.00 0.00 41.61 2.59
432 433 3.071479 ACAAAATGCGAACACGGAGTAT 58.929 40.909 0.00 0.00 41.61 2.12
433 434 3.124636 ACAAAATGCGAACACGGAGTATC 59.875 43.478 0.00 0.00 41.61 2.24
434 435 2.961526 AATGCGAACACGGAGTATCT 57.038 45.000 0.00 0.00 41.61 1.98
446 447 3.619233 GGAGTATCTGAGCTCGAACTC 57.381 52.381 20.64 20.64 37.19 3.01
447 448 2.946329 GGAGTATCTGAGCTCGAACTCA 59.054 50.000 25.77 17.14 44.32 3.41
448 449 3.378742 GGAGTATCTGAGCTCGAACTCAA 59.621 47.826 25.77 10.59 45.72 3.02
449 450 4.142359 GGAGTATCTGAGCTCGAACTCAAA 60.142 45.833 25.77 7.15 45.72 2.69
450 451 5.451242 GGAGTATCTGAGCTCGAACTCAAAT 60.451 44.000 25.77 13.93 45.72 2.32
451 452 5.347342 AGTATCTGAGCTCGAACTCAAATG 58.653 41.667 18.50 8.33 45.72 2.32
452 453 3.942130 TCTGAGCTCGAACTCAAATGA 57.058 42.857 18.50 10.40 45.72 2.57
453 454 3.842820 TCTGAGCTCGAACTCAAATGAG 58.157 45.455 18.50 8.84 45.72 2.90
454 455 2.928757 CTGAGCTCGAACTCAAATGAGG 59.071 50.000 18.50 3.41 45.72 3.86
455 456 2.300152 TGAGCTCGAACTCAAATGAGGT 59.700 45.455 15.92 8.07 46.43 3.85
456 457 3.244215 TGAGCTCGAACTCAAATGAGGTT 60.244 43.478 15.92 6.65 43.22 3.50
457 458 3.070018 AGCTCGAACTCAAATGAGGTTG 58.930 45.455 14.50 11.80 43.22 3.77
458 459 2.160417 GCTCGAACTCAAATGAGGTTGG 59.840 50.000 14.29 7.55 43.22 3.77
459 460 3.664107 CTCGAACTCAAATGAGGTTGGA 58.336 45.455 14.29 8.79 43.22 3.53
460 461 4.256920 CTCGAACTCAAATGAGGTTGGAT 58.743 43.478 14.29 0.00 43.22 3.41
461 462 4.002982 TCGAACTCAAATGAGGTTGGATG 58.997 43.478 14.29 0.00 43.22 3.51
462 463 4.002982 CGAACTCAAATGAGGTTGGATGA 58.997 43.478 14.50 0.00 43.22 2.92
463 464 4.455533 CGAACTCAAATGAGGTTGGATGAA 59.544 41.667 14.50 0.00 43.22 2.57
464 465 5.124457 CGAACTCAAATGAGGTTGGATGAAT 59.876 40.000 14.50 0.00 43.22 2.57
465 466 6.316140 CGAACTCAAATGAGGTTGGATGAATA 59.684 38.462 14.50 0.00 43.22 1.75
466 467 7.466455 CGAACTCAAATGAGGTTGGATGAATAG 60.466 40.741 14.50 0.00 43.22 1.73
467 468 6.725364 ACTCAAATGAGGTTGGATGAATAGT 58.275 36.000 14.50 0.00 46.13 2.12
468 469 7.861629 ACTCAAATGAGGTTGGATGAATAGTA 58.138 34.615 14.50 0.00 46.13 1.82
469 470 8.328758 ACTCAAATGAGGTTGGATGAATAGTAA 58.671 33.333 14.50 0.00 46.13 2.24
470 471 9.177608 CTCAAATGAGGTTGGATGAATAGTAAA 57.822 33.333 2.38 0.00 38.48 2.01
471 472 9.527157 TCAAATGAGGTTGGATGAATAGTAAAA 57.473 29.630 0.00 0.00 0.00 1.52
474 475 7.786178 TGAGGTTGGATGAATAGTAAAATCG 57.214 36.000 0.00 0.00 0.00 3.34
475 476 7.561251 TGAGGTTGGATGAATAGTAAAATCGA 58.439 34.615 0.00 0.00 0.00 3.59
476 477 8.044309 TGAGGTTGGATGAATAGTAAAATCGAA 58.956 33.333 0.00 0.00 0.00 3.71
477 478 8.801882 AGGTTGGATGAATAGTAAAATCGAAA 57.198 30.769 0.00 0.00 0.00 3.46
478 479 8.893727 AGGTTGGATGAATAGTAAAATCGAAAG 58.106 33.333 0.00 0.00 0.00 2.62
541 542 9.665719 ATGGTAAACTTTGACAATTTTTGAAGT 57.334 25.926 0.00 0.00 29.62 3.01
542 543 8.930760 TGGTAAACTTTGACAATTTTTGAAGTG 58.069 29.630 0.00 0.00 29.16 3.16
543 544 7.902917 GGTAAACTTTGACAATTTTTGAAGTGC 59.097 33.333 0.00 0.00 29.16 4.40
544 545 7.671495 AAACTTTGACAATTTTTGAAGTGCT 57.329 28.000 0.00 0.00 29.16 4.40
545 546 7.671495 AACTTTGACAATTTTTGAAGTGCTT 57.329 28.000 0.00 0.00 29.16 3.91
546 547 7.064060 ACTTTGACAATTTTTGAAGTGCTTG 57.936 32.000 0.00 0.00 0.00 4.01
547 548 5.467902 TTGACAATTTTTGAAGTGCTTGC 57.532 34.783 0.00 0.00 0.00 4.01
548 549 4.502016 TGACAATTTTTGAAGTGCTTGCA 58.498 34.783 0.00 0.00 0.00 4.08
549 550 4.934001 TGACAATTTTTGAAGTGCTTGCAA 59.066 33.333 0.00 0.00 0.00 4.08
550 551 5.410746 TGACAATTTTTGAAGTGCTTGCAAA 59.589 32.000 0.00 0.00 0.00 3.68
551 552 6.093771 TGACAATTTTTGAAGTGCTTGCAAAT 59.906 30.769 0.00 0.00 32.27 2.32
552 553 6.854778 ACAATTTTTGAAGTGCTTGCAAATT 58.145 28.000 0.00 0.00 32.27 1.82
553 554 7.314393 ACAATTTTTGAAGTGCTTGCAAATTT 58.686 26.923 0.00 0.00 32.27 1.82
554 555 7.813627 ACAATTTTTGAAGTGCTTGCAAATTTT 59.186 25.926 0.00 0.00 32.27 1.82
555 556 8.648968 CAATTTTTGAAGTGCTTGCAAATTTTT 58.351 25.926 0.00 0.00 32.27 1.94
556 557 9.852091 AATTTTTGAAGTGCTTGCAAATTTTTA 57.148 22.222 0.00 0.00 32.27 1.52
557 558 8.892887 TTTTTGAAGTGCTTGCAAATTTTTAG 57.107 26.923 0.00 0.00 32.27 1.85
558 559 5.655893 TGAAGTGCTTGCAAATTTTTAGC 57.344 34.783 0.00 0.00 0.00 3.09
559 560 5.114780 TGAAGTGCTTGCAAATTTTTAGCA 58.885 33.333 12.28 12.28 39.35 3.49
560 561 5.759273 TGAAGTGCTTGCAAATTTTTAGCAT 59.241 32.000 16.96 6.76 43.01 3.79
561 562 5.600908 AGTGCTTGCAAATTTTTAGCATG 57.399 34.783 16.96 13.17 43.01 4.06
562 563 5.299148 AGTGCTTGCAAATTTTTAGCATGA 58.701 33.333 16.96 0.00 43.01 3.07
563 564 5.407387 AGTGCTTGCAAATTTTTAGCATGAG 59.593 36.000 16.96 8.37 43.01 2.90
564 565 5.406175 GTGCTTGCAAATTTTTAGCATGAGA 59.594 36.000 16.96 3.78 43.01 3.27
565 566 6.091713 GTGCTTGCAAATTTTTAGCATGAGAT 59.908 34.615 16.96 0.00 43.01 2.75
566 567 6.311935 TGCTTGCAAATTTTTAGCATGAGATC 59.688 34.615 15.02 0.00 36.96 2.75
567 568 6.311935 GCTTGCAAATTTTTAGCATGAGATCA 59.688 34.615 15.02 0.00 38.19 2.92
568 569 7.585286 TTGCAAATTTTTAGCATGAGATCAC 57.415 32.000 0.00 0.00 38.19 3.06
569 570 6.689554 TGCAAATTTTTAGCATGAGATCACA 58.310 32.000 0.00 0.00 32.55 3.58
570 571 7.324935 TGCAAATTTTTAGCATGAGATCACAT 58.675 30.769 0.00 0.00 32.55 3.21
571 572 7.820386 TGCAAATTTTTAGCATGAGATCACATT 59.180 29.630 2.55 0.00 32.55 2.71
572 573 9.304731 GCAAATTTTTAGCATGAGATCACATTA 57.695 29.630 2.55 0.00 0.00 1.90
580 581 9.716531 TTAGCATGAGATCACATTAATAGAAGG 57.283 33.333 2.55 0.00 0.00 3.46
581 582 6.654161 AGCATGAGATCACATTAATAGAAGGC 59.346 38.462 2.55 1.17 0.00 4.35
582 583 6.401903 GCATGAGATCACATTAATAGAAGGCG 60.402 42.308 2.55 0.00 0.00 5.52
583 584 6.161855 TGAGATCACATTAATAGAAGGCGT 57.838 37.500 0.00 0.00 0.00 5.68
584 585 5.985530 TGAGATCACATTAATAGAAGGCGTG 59.014 40.000 0.00 0.00 0.00 5.34
585 586 6.161855 AGATCACATTAATAGAAGGCGTGA 57.838 37.500 5.35 5.35 36.45 4.35
586 587 5.986135 AGATCACATTAATAGAAGGCGTGAC 59.014 40.000 5.06 1.73 34.99 3.67
587 588 5.079689 TCACATTAATAGAAGGCGTGACA 57.920 39.130 0.00 0.00 0.00 3.58
588 589 5.483811 TCACATTAATAGAAGGCGTGACAA 58.516 37.500 0.00 0.00 0.00 3.18
589 590 5.935206 TCACATTAATAGAAGGCGTGACAAA 59.065 36.000 0.00 0.00 0.00 2.83
590 591 6.428465 TCACATTAATAGAAGGCGTGACAAAA 59.572 34.615 0.00 0.00 0.00 2.44
591 592 7.041030 TCACATTAATAGAAGGCGTGACAAAAA 60.041 33.333 0.00 0.00 0.00 1.94
654 655 1.238439 ATTTCACCACGTGGAAGCAG 58.762 50.000 40.21 22.12 34.27 4.24
677 678 0.665972 TGCAATTCTTTTTCGGGCGC 60.666 50.000 0.00 0.00 0.00 6.53
901 1042 1.227234 CGTACGCCCATCATGCTCA 60.227 57.895 0.52 0.00 0.00 4.26
907 1051 0.387929 GCCCATCATGCTCAATGTGG 59.612 55.000 0.00 0.00 37.28 4.17
956 1119 1.973281 CCCCACACCATGCTCACAC 60.973 63.158 0.00 0.00 0.00 3.82
993 1174 0.247736 ACTCGTGAGCAACTCATCCC 59.752 55.000 0.00 0.00 42.73 3.85
994 1175 0.803768 CTCGTGAGCAACTCATCCCG 60.804 60.000 0.00 0.56 42.73 5.14
1012 1198 1.521450 CGGAGCAATGGATGATGCCC 61.521 60.000 0.00 0.00 43.57 5.36
2394 3460 1.284982 CTGTGGTGAAGGCGTTCGAG 61.285 60.000 13.98 2.06 35.17 4.04
2504 3576 2.143122 GAGGATCAAACGCACAACTCA 58.857 47.619 0.00 0.00 33.17 3.41
2505 3577 2.548057 GAGGATCAAACGCACAACTCAA 59.452 45.455 0.00 0.00 33.17 3.02
2519 3591 7.326789 ACGCACAACTCAAAATTCATAATTCAG 59.673 33.333 0.00 0.00 0.00 3.02
2541 3617 9.434275 TTCAGATGACTAGGAGAATGGTTTATA 57.566 33.333 0.00 0.00 0.00 0.98
2543 3619 9.083422 CAGATGACTAGGAGAATGGTTTATAGA 57.917 37.037 0.00 0.00 0.00 1.98
2547 3623 8.150945 TGACTAGGAGAATGGTTTATAGAATGC 58.849 37.037 0.00 0.00 0.00 3.56
2550 3626 5.760253 AGGAGAATGGTTTATAGAATGCGTG 59.240 40.000 0.00 0.00 0.00 5.34
2551 3627 5.424121 AGAATGGTTTATAGAATGCGTGC 57.576 39.130 0.00 0.00 0.00 5.34
2552 3628 4.881273 AGAATGGTTTATAGAATGCGTGCA 59.119 37.500 0.00 0.00 0.00 4.57
2553 3629 5.532406 AGAATGGTTTATAGAATGCGTGCAT 59.468 36.000 0.51 0.51 38.46 3.96
2555 3631 6.875948 ATGGTTTATAGAATGCGTGCATTA 57.124 33.333 19.18 6.30 45.50 1.90
2556 3632 6.685527 TGGTTTATAGAATGCGTGCATTAA 57.314 33.333 19.18 11.44 45.50 1.40
2557 3633 7.270757 TGGTTTATAGAATGCGTGCATTAAT 57.729 32.000 19.18 16.82 45.50 1.40
2558 3634 7.359595 TGGTTTATAGAATGCGTGCATTAATC 58.640 34.615 19.18 10.78 45.50 1.75
2559 3635 6.801862 GGTTTATAGAATGCGTGCATTAATCC 59.198 38.462 19.18 13.72 45.50 3.01
2560 3636 7.359595 GTTTATAGAATGCGTGCATTAATCCA 58.640 34.615 19.18 4.68 45.50 3.41
2561 3637 3.698029 AGAATGCGTGCATTAATCCAC 57.302 42.857 19.18 0.00 45.50 4.02
2568 3644 3.840890 GTGCATTAATCCACGGTTGAA 57.159 42.857 0.00 0.00 0.00 2.69
2569 3645 3.498082 GTGCATTAATCCACGGTTGAAC 58.502 45.455 0.00 0.00 0.00 3.18
2570 3646 3.057876 GTGCATTAATCCACGGTTGAACA 60.058 43.478 0.00 0.00 0.00 3.18
2571 3647 3.761218 TGCATTAATCCACGGTTGAACAT 59.239 39.130 0.00 0.00 0.00 2.71
2572 3648 4.104776 GCATTAATCCACGGTTGAACATG 58.895 43.478 0.00 0.00 0.00 3.21
2573 3649 4.142491 GCATTAATCCACGGTTGAACATGA 60.142 41.667 0.00 0.00 0.00 3.07
2574 3650 5.450412 GCATTAATCCACGGTTGAACATGAT 60.450 40.000 0.00 0.00 0.00 2.45
2575 3651 6.238621 GCATTAATCCACGGTTGAACATGATA 60.239 38.462 0.00 0.00 0.00 2.15
2576 3652 6.671614 TTAATCCACGGTTGAACATGATAC 57.328 37.500 0.00 0.00 0.00 2.24
2577 3653 3.973206 TCCACGGTTGAACATGATACT 57.027 42.857 0.00 0.00 0.00 2.12
2578 3654 5.607939 ATCCACGGTTGAACATGATACTA 57.392 39.130 0.00 0.00 0.00 1.82
2579 3655 5.006153 TCCACGGTTGAACATGATACTAG 57.994 43.478 0.00 0.00 0.00 2.57
2580 3656 4.707934 TCCACGGTTGAACATGATACTAGA 59.292 41.667 0.00 0.00 0.00 2.43
2581 3657 5.186215 TCCACGGTTGAACATGATACTAGAA 59.814 40.000 0.00 0.00 0.00 2.10
2582 3658 5.520288 CCACGGTTGAACATGATACTAGAAG 59.480 44.000 0.00 0.00 0.00 2.85
2583 3659 5.520288 CACGGTTGAACATGATACTAGAAGG 59.480 44.000 0.00 0.00 0.00 3.46
2584 3660 5.421056 ACGGTTGAACATGATACTAGAAGGA 59.579 40.000 0.00 0.00 0.00 3.36
2585 3661 6.098409 ACGGTTGAACATGATACTAGAAGGAT 59.902 38.462 0.00 0.00 0.00 3.24
2586 3662 6.986817 CGGTTGAACATGATACTAGAAGGATT 59.013 38.462 0.00 0.00 0.00 3.01
2596 3672 3.849953 GAAGGATTCGCGCGCGTT 61.850 61.111 46.54 36.06 40.74 4.84
2597 3673 4.147322 AAGGATTCGCGCGCGTTG 62.147 61.111 46.54 24.97 40.74 4.10
2615 3691 4.335647 CTGCCCCGGAAGCACACT 62.336 66.667 14.33 0.00 36.01 3.55
2616 3692 4.641645 TGCCCCGGAAGCACACTG 62.642 66.667 14.33 0.00 34.69 3.66
2619 3695 4.722700 CCCGGAAGCACACTGGGG 62.723 72.222 0.73 0.00 46.89 4.96
2620 3696 3.636231 CCGGAAGCACACTGGGGA 61.636 66.667 0.00 0.00 0.00 4.81
2621 3697 2.671070 CGGAAGCACACTGGGGAT 59.329 61.111 0.00 0.00 0.00 3.85
2622 3698 1.002134 CGGAAGCACACTGGGGATT 60.002 57.895 0.00 0.00 0.00 3.01
2623 3699 1.308069 CGGAAGCACACTGGGGATTG 61.308 60.000 0.00 0.00 0.00 2.67
2624 3700 1.598701 GGAAGCACACTGGGGATTGC 61.599 60.000 0.00 0.00 35.08 3.56
2625 3701 0.895100 GAAGCACACTGGGGATTGCA 60.895 55.000 0.00 0.00 37.44 4.08
2626 3702 0.896940 AAGCACACTGGGGATTGCAG 60.897 55.000 0.00 0.00 37.44 4.41
2627 3703 1.604593 GCACACTGGGGATTGCAGT 60.605 57.895 0.00 0.00 34.97 4.40
2629 3705 0.250858 CACACTGGGGATTGCAGTGA 60.251 55.000 7.59 0.00 46.55 3.41
2630 3706 0.250901 ACACTGGGGATTGCAGTGAC 60.251 55.000 7.59 0.00 46.55 3.67
2631 3707 0.250858 CACTGGGGATTGCAGTGACA 60.251 55.000 0.00 0.00 46.55 3.58
2632 3708 0.700564 ACTGGGGATTGCAGTGACAT 59.299 50.000 0.00 0.00 0.00 3.06
2633 3709 1.340405 ACTGGGGATTGCAGTGACATC 60.340 52.381 0.00 0.00 0.00 3.06
2634 3710 0.994247 TGGGGATTGCAGTGACATCT 59.006 50.000 0.00 0.00 0.00 2.90
2635 3711 1.355381 TGGGGATTGCAGTGACATCTT 59.645 47.619 0.00 0.00 0.00 2.40
2636 3712 2.225091 TGGGGATTGCAGTGACATCTTT 60.225 45.455 0.00 0.00 0.00 2.52
2637 3713 2.424956 GGGGATTGCAGTGACATCTTTC 59.575 50.000 0.00 0.00 0.00 2.62
2638 3714 2.424956 GGGATTGCAGTGACATCTTTCC 59.575 50.000 0.00 0.00 0.00 3.13
2639 3715 2.096496 GGATTGCAGTGACATCTTTCCG 59.904 50.000 0.00 0.00 0.00 4.30
2640 3716 0.874390 TTGCAGTGACATCTTTCCGC 59.126 50.000 0.00 0.00 0.00 5.54
2641 3717 0.250252 TGCAGTGACATCTTTCCGCA 60.250 50.000 0.00 0.00 0.00 5.69
2642 3718 1.089920 GCAGTGACATCTTTCCGCAT 58.910 50.000 0.00 0.00 0.00 4.73
2643 3719 1.470098 GCAGTGACATCTTTCCGCATT 59.530 47.619 0.00 0.00 0.00 3.56
2644 3720 2.095059 GCAGTGACATCTTTCCGCATTT 60.095 45.455 0.00 0.00 0.00 2.32
2645 3721 3.751621 CAGTGACATCTTTCCGCATTTC 58.248 45.455 0.00 0.00 0.00 2.17
2646 3722 3.189080 CAGTGACATCTTTCCGCATTTCA 59.811 43.478 0.00 0.00 0.00 2.69
2647 3723 3.820467 AGTGACATCTTTCCGCATTTCAA 59.180 39.130 0.00 0.00 0.00 2.69
2648 3724 4.460382 AGTGACATCTTTCCGCATTTCAAT 59.540 37.500 0.00 0.00 0.00 2.57
2649 3725 4.560035 GTGACATCTTTCCGCATTTCAATG 59.440 41.667 0.00 0.00 39.40 2.82
2650 3726 4.218200 TGACATCTTTCCGCATTTCAATGT 59.782 37.500 1.59 0.00 38.65 2.71
2651 3727 4.487948 ACATCTTTCCGCATTTCAATGTG 58.512 39.130 6.16 6.16 44.40 3.21
2652 3728 4.022068 ACATCTTTCCGCATTTCAATGTGT 60.022 37.500 11.24 0.00 43.54 3.72
2653 3729 4.582701 TCTTTCCGCATTTCAATGTGTT 57.417 36.364 11.24 0.00 43.54 3.32
2654 3730 4.942852 TCTTTCCGCATTTCAATGTGTTT 58.057 34.783 11.24 0.00 43.54 2.83
2655 3731 4.744137 TCTTTCCGCATTTCAATGTGTTTG 59.256 37.500 11.24 0.00 43.54 2.93
2656 3732 2.402305 TCCGCATTTCAATGTGTTTGC 58.598 42.857 11.24 0.00 43.54 3.68
2657 3733 2.035704 TCCGCATTTCAATGTGTTTGCT 59.964 40.909 11.24 0.00 43.54 3.91
2658 3734 2.156117 CCGCATTTCAATGTGTTTGCTG 59.844 45.455 11.24 0.00 43.54 4.41
2659 3735 3.051327 CGCATTTCAATGTGTTTGCTGA 58.949 40.909 5.11 0.00 40.94 4.26
2660 3736 3.490155 CGCATTTCAATGTGTTTGCTGAA 59.510 39.130 5.11 0.00 40.94 3.02
2661 3737 4.025896 CGCATTTCAATGTGTTTGCTGAAA 60.026 37.500 5.11 0.00 40.94 2.69
2662 3738 5.333492 CGCATTTCAATGTGTTTGCTGAAAT 60.333 36.000 5.11 3.64 45.05 2.17
2663 3739 6.075280 GCATTTCAATGTGTTTGCTGAAATC 58.925 36.000 6.03 0.36 43.31 2.17
2664 3740 6.073440 GCATTTCAATGTGTTTGCTGAAATCT 60.073 34.615 6.03 0.00 43.31 2.40
2665 3741 7.116662 GCATTTCAATGTGTTTGCTGAAATCTA 59.883 33.333 6.03 0.00 43.31 1.98
2666 3742 7.928908 TTTCAATGTGTTTGCTGAAATCTAC 57.071 32.000 0.00 0.00 33.90 2.59
2667 3743 6.882610 TCAATGTGTTTGCTGAAATCTACT 57.117 33.333 0.00 0.00 35.16 2.57
2668 3744 6.902341 TCAATGTGTTTGCTGAAATCTACTC 58.098 36.000 0.00 0.00 35.16 2.59
2669 3745 5.886960 ATGTGTTTGCTGAAATCTACTCC 57.113 39.130 0.00 0.00 0.00 3.85
2670 3746 4.072131 TGTGTTTGCTGAAATCTACTCCC 58.928 43.478 0.00 0.00 0.00 4.30
2671 3747 4.202461 TGTGTTTGCTGAAATCTACTCCCT 60.202 41.667 0.00 0.00 0.00 4.20
2672 3748 4.393371 GTGTTTGCTGAAATCTACTCCCTC 59.607 45.833 0.00 0.00 0.00 4.30
2673 3749 3.914426 TTGCTGAAATCTACTCCCTCC 57.086 47.619 0.00 0.00 0.00 4.30
2674 3750 1.757118 TGCTGAAATCTACTCCCTCCG 59.243 52.381 0.00 0.00 0.00 4.63
2675 3751 1.757699 GCTGAAATCTACTCCCTCCGT 59.242 52.381 0.00 0.00 0.00 4.69
2676 3752 2.168728 GCTGAAATCTACTCCCTCCGTT 59.831 50.000 0.00 0.00 0.00 4.44
2677 3753 3.738590 GCTGAAATCTACTCCCTCCGTTC 60.739 52.174 0.00 0.00 0.00 3.95
2678 3754 2.426024 TGAAATCTACTCCCTCCGTTCG 59.574 50.000 0.00 0.00 0.00 3.95
2679 3755 1.400737 AATCTACTCCCTCCGTTCGG 58.599 55.000 4.74 4.74 0.00 4.30
2680 3756 0.549950 ATCTACTCCCTCCGTTCGGA 59.450 55.000 13.34 13.34 0.00 4.55
2681 3757 0.329261 TCTACTCCCTCCGTTCGGAA 59.671 55.000 14.79 0.04 33.41 4.30
2682 3758 0.455005 CTACTCCCTCCGTTCGGAAC 59.545 60.000 14.79 10.83 33.41 3.62
2683 3759 0.038744 TACTCCCTCCGTTCGGAACT 59.961 55.000 17.94 0.33 33.41 3.01
2684 3760 0.038744 ACTCCCTCCGTTCGGAACTA 59.961 55.000 17.94 6.05 33.41 2.24
2685 3761 1.341778 ACTCCCTCCGTTCGGAACTAT 60.342 52.381 17.94 0.00 33.41 2.12
2686 3762 1.755380 CTCCCTCCGTTCGGAACTATT 59.245 52.381 17.94 0.00 33.41 1.73
2687 3763 1.753073 TCCCTCCGTTCGGAACTATTC 59.247 52.381 17.94 0.00 33.41 1.75
2688 3764 1.479323 CCCTCCGTTCGGAACTATTCA 59.521 52.381 17.94 0.00 33.41 2.57
2689 3765 2.093869 CCCTCCGTTCGGAACTATTCAA 60.094 50.000 17.94 0.00 33.41 2.69
2690 3766 3.592059 CCTCCGTTCGGAACTATTCAAA 58.408 45.455 17.94 0.00 33.41 2.69
2691 3767 3.998341 CCTCCGTTCGGAACTATTCAAAA 59.002 43.478 17.94 0.00 33.41 2.44
2692 3768 4.634443 CCTCCGTTCGGAACTATTCAAAAT 59.366 41.667 17.94 0.00 33.41 1.82
2693 3769 5.447279 CCTCCGTTCGGAACTATTCAAAATG 60.447 44.000 17.94 0.00 33.41 2.32
2694 3770 4.998672 TCCGTTCGGAACTATTCAAAATGT 59.001 37.500 17.94 0.00 0.00 2.71
2695 3771 6.164876 TCCGTTCGGAACTATTCAAAATGTA 58.835 36.000 17.94 0.00 0.00 2.29
2696 3772 6.819649 TCCGTTCGGAACTATTCAAAATGTAT 59.180 34.615 17.94 0.00 0.00 2.29
2697 3773 7.010738 TCCGTTCGGAACTATTCAAAATGTATC 59.989 37.037 17.94 0.00 0.00 2.24
2698 3774 7.011109 CCGTTCGGAACTATTCAAAATGTATCT 59.989 37.037 17.94 0.00 0.00 1.98
2699 3775 9.027129 CGTTCGGAACTATTCAAAATGTATCTA 57.973 33.333 17.94 0.00 0.00 1.98
2735 3811 8.862325 AGTTGTAGATACATCCATTTTTGTGA 57.138 30.769 0.00 0.00 35.89 3.58
2736 3812 8.730680 AGTTGTAGATACATCCATTTTTGTGAC 58.269 33.333 0.00 0.00 35.89 3.67
2737 3813 8.511321 GTTGTAGATACATCCATTTTTGTGACA 58.489 33.333 0.00 0.00 35.89 3.58
2738 3814 8.628630 TGTAGATACATCCATTTTTGTGACAA 57.371 30.769 0.00 0.00 0.00 3.18
2739 3815 8.729756 TGTAGATACATCCATTTTTGTGACAAG 58.270 33.333 0.00 0.00 0.00 3.16
2740 3816 7.765695 AGATACATCCATTTTTGTGACAAGT 57.234 32.000 0.00 0.00 0.00 3.16
2741 3817 8.862325 AGATACATCCATTTTTGTGACAAGTA 57.138 30.769 0.00 0.00 0.00 2.24
2742 3818 9.295825 AGATACATCCATTTTTGTGACAAGTAA 57.704 29.630 0.00 0.00 0.00 2.24
2746 3822 9.260002 ACATCCATTTTTGTGACAAGTAATTTC 57.740 29.630 0.00 0.00 0.00 2.17
2747 3823 7.922505 TCCATTTTTGTGACAAGTAATTTCG 57.077 32.000 0.00 0.00 0.00 3.46
2748 3824 7.708051 TCCATTTTTGTGACAAGTAATTTCGA 58.292 30.769 0.00 0.00 0.00 3.71
2749 3825 8.191446 TCCATTTTTGTGACAAGTAATTTCGAA 58.809 29.630 0.00 0.00 0.00 3.71
2750 3826 8.265998 CCATTTTTGTGACAAGTAATTTCGAAC 58.734 33.333 0.00 0.00 0.00 3.95
2751 3827 8.802856 CATTTTTGTGACAAGTAATTTCGAACA 58.197 29.630 0.00 0.00 0.00 3.18
2752 3828 7.962934 TTTTGTGACAAGTAATTTCGAACAG 57.037 32.000 0.00 0.00 0.00 3.16
2753 3829 6.912203 TTGTGACAAGTAATTTCGAACAGA 57.088 33.333 0.00 0.00 0.00 3.41
2754 3830 6.525121 TGTGACAAGTAATTTCGAACAGAG 57.475 37.500 0.00 0.00 0.00 3.35
2755 3831 5.465390 TGTGACAAGTAATTTCGAACAGAGG 59.535 40.000 0.00 0.00 0.00 3.69
2756 3832 5.694910 GTGACAAGTAATTTCGAACAGAGGA 59.305 40.000 0.00 0.00 0.00 3.71
2757 3833 6.202188 GTGACAAGTAATTTCGAACAGAGGAA 59.798 38.462 0.00 0.00 0.00 3.36
2758 3834 6.423905 TGACAAGTAATTTCGAACAGAGGAAG 59.576 38.462 0.00 0.00 0.00 3.46
2762 3838 6.396450 AGTAATTTCGAACAGAGGAAGTACC 58.604 40.000 0.00 0.00 39.35 3.34
2829 3905 0.829333 TTGCACAGTGGCACCAAAAT 59.171 45.000 15.27 0.00 44.86 1.82
2831 3907 0.600782 GCACAGTGGCACCAAAATGG 60.601 55.000 15.27 1.48 45.02 3.16
2842 3918 2.836981 CACCAAAATGGCATCCCCTTAA 59.163 45.455 0.00 0.00 42.67 1.85
2906 3990 5.735324 CAGATCAATCATTTGCGTCTACTG 58.265 41.667 0.00 0.00 30.95 2.74
2916 4000 0.802607 GCGTCTACTGCTGCAGTACC 60.803 60.000 32.44 24.46 43.46 3.34
2924 4008 2.757868 ACTGCTGCAGTACCAACAAAAA 59.242 40.909 32.18 0.00 43.46 1.94
3024 4108 4.159135 CCTTCCAAAGCATGATTTAGCTGT 59.841 41.667 8.90 0.00 41.70 4.40
3286 4375 1.303309 GGATATGCAAGCTTCGCTGT 58.697 50.000 17.72 11.15 39.62 4.40
3289 4378 1.647545 TATGCAAGCTTCGCTGTGCC 61.648 55.000 17.72 0.00 39.62 5.01
3302 4391 1.529152 CTGTGCCAGGAATTGCAGCA 61.529 55.000 10.03 10.03 38.34 4.41
3306 4395 0.461339 GCCAGGAATTGCAGCAATGG 60.461 55.000 21.56 19.48 34.04 3.16
3322 4411 6.756074 GCAGCAATGGCATTTAAGTTACATAA 59.244 34.615 10.65 0.00 44.61 1.90
3384 4473 7.655732 GGTGCACAAGATTTTAGTAAACCAATT 59.344 33.333 20.43 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.291184 TTTCTCGCGCTGTGGTCATG 61.291 55.000 5.56 0.00 0.00 3.07
1 2 0.602638 TTTTCTCGCGCTGTGGTCAT 60.603 50.000 5.56 0.00 0.00 3.06
2 3 1.221466 CTTTTCTCGCGCTGTGGTCA 61.221 55.000 5.56 0.00 0.00 4.02
3 4 1.493311 CTTTTCTCGCGCTGTGGTC 59.507 57.895 5.56 0.00 0.00 4.02
4 5 1.961277 CCTTTTCTCGCGCTGTGGT 60.961 57.895 5.56 0.00 0.00 4.16
5 6 1.227999 TTCCTTTTCTCGCGCTGTGG 61.228 55.000 5.56 0.00 0.00 4.17
6 7 0.164647 CTTCCTTTTCTCGCGCTGTG 59.835 55.000 5.56 0.05 0.00 3.66
7 8 0.249911 ACTTCCTTTTCTCGCGCTGT 60.250 50.000 5.56 0.00 0.00 4.40
8 9 0.868406 AACTTCCTTTTCTCGCGCTG 59.132 50.000 5.56 0.00 0.00 5.18
9 10 2.450609 TAACTTCCTTTTCTCGCGCT 57.549 45.000 5.56 0.00 0.00 5.92
10 11 3.059120 AGTTTAACTTCCTTTTCTCGCGC 60.059 43.478 0.00 0.00 0.00 6.86
11 12 4.025145 ACAGTTTAACTTCCTTTTCTCGCG 60.025 41.667 0.00 0.00 0.00 5.87
12 13 5.419760 ACAGTTTAACTTCCTTTTCTCGC 57.580 39.130 0.00 0.00 0.00 5.03
13 14 6.627671 CGAAACAGTTTAACTTCCTTTTCTCG 59.372 38.462 0.00 0.00 0.00 4.04
14 15 7.428472 CACGAAACAGTTTAACTTCCTTTTCTC 59.572 37.037 0.00 0.00 0.00 2.87
15 16 7.094506 ACACGAAACAGTTTAACTTCCTTTTCT 60.095 33.333 0.00 0.00 0.00 2.52
16 17 7.025365 ACACGAAACAGTTTAACTTCCTTTTC 58.975 34.615 0.00 2.25 0.00 2.29
17 18 6.916440 ACACGAAACAGTTTAACTTCCTTTT 58.084 32.000 0.00 0.00 0.00 2.27
18 19 6.505044 ACACGAAACAGTTTAACTTCCTTT 57.495 33.333 0.00 0.00 0.00 3.11
19 20 5.220529 CGACACGAAACAGTTTAACTTCCTT 60.221 40.000 0.00 0.00 0.00 3.36
20 21 4.269363 CGACACGAAACAGTTTAACTTCCT 59.731 41.667 0.00 0.00 0.00 3.36
21 22 4.511734 CGACACGAAACAGTTTAACTTCC 58.488 43.478 0.00 0.00 0.00 3.46
22 23 4.511734 CCGACACGAAACAGTTTAACTTC 58.488 43.478 0.00 0.00 0.00 3.01
23 24 3.310501 CCCGACACGAAACAGTTTAACTT 59.689 43.478 0.00 0.00 0.00 2.66
24 25 2.867975 CCCGACACGAAACAGTTTAACT 59.132 45.455 0.00 0.00 0.00 2.24
25 26 2.600556 GCCCGACACGAAACAGTTTAAC 60.601 50.000 0.00 0.00 0.00 2.01
26 27 1.598601 GCCCGACACGAAACAGTTTAA 59.401 47.619 0.00 0.00 0.00 1.52
27 28 1.219646 GCCCGACACGAAACAGTTTA 58.780 50.000 0.00 0.00 0.00 2.01
28 29 1.441732 GGCCCGACACGAAACAGTTT 61.442 55.000 0.00 0.00 0.00 2.66
29 30 1.890510 GGCCCGACACGAAACAGTT 60.891 57.895 0.00 0.00 0.00 3.16
30 31 2.280592 GGCCCGACACGAAACAGT 60.281 61.111 0.00 0.00 0.00 3.55
31 32 2.280524 TGGCCCGACACGAAACAG 60.281 61.111 0.00 0.00 0.00 3.16
32 33 2.589442 GTGGCCCGACACGAAACA 60.589 61.111 0.00 0.00 0.00 2.83
46 47 4.389576 GAAGTTGCTGCGGCGTGG 62.390 66.667 13.96 2.51 42.25 4.94
47 48 3.648982 TGAAGTTGCTGCGGCGTG 61.649 61.111 13.96 2.90 42.25 5.34
48 49 3.649986 GTGAAGTTGCTGCGGCGT 61.650 61.111 13.96 0.00 42.25 5.68
49 50 2.770587 GAAGTGAAGTTGCTGCGGCG 62.771 60.000 13.96 0.51 42.25 6.46
50 51 1.081840 GAAGTGAAGTTGCTGCGGC 60.082 57.895 11.65 11.65 39.26 6.53
51 52 0.947244 AAGAAGTGAAGTTGCTGCGG 59.053 50.000 0.00 0.00 0.00 5.69
52 53 1.869767 AGAAGAAGTGAAGTTGCTGCG 59.130 47.619 0.00 0.00 0.00 5.18
53 54 2.874701 TGAGAAGAAGTGAAGTTGCTGC 59.125 45.455 0.00 0.00 0.00 5.25
54 55 3.059051 GCTGAGAAGAAGTGAAGTTGCTG 60.059 47.826 0.00 0.00 0.00 4.41
55 56 3.137533 GCTGAGAAGAAGTGAAGTTGCT 58.862 45.455 0.00 0.00 0.00 3.91
56 57 3.137533 AGCTGAGAAGAAGTGAAGTTGC 58.862 45.455 0.00 0.00 0.00 4.17
57 58 4.388469 GCTAGCTGAGAAGAAGTGAAGTTG 59.612 45.833 7.70 0.00 0.00 3.16
58 59 4.562552 GGCTAGCTGAGAAGAAGTGAAGTT 60.563 45.833 15.72 0.00 0.00 2.66
59 60 3.056179 GGCTAGCTGAGAAGAAGTGAAGT 60.056 47.826 15.72 0.00 0.00 3.01
60 61 3.195396 AGGCTAGCTGAGAAGAAGTGAAG 59.805 47.826 15.72 0.00 0.00 3.02
61 62 3.056250 CAGGCTAGCTGAGAAGAAGTGAA 60.056 47.826 15.72 0.00 0.00 3.18
62 63 2.495270 CAGGCTAGCTGAGAAGAAGTGA 59.505 50.000 15.72 0.00 0.00 3.41
63 64 2.233431 ACAGGCTAGCTGAGAAGAAGTG 59.767 50.000 15.72 0.10 0.00 3.16
64 65 2.534990 ACAGGCTAGCTGAGAAGAAGT 58.465 47.619 15.72 0.00 0.00 3.01
65 66 4.556501 CGATACAGGCTAGCTGAGAAGAAG 60.557 50.000 15.72 0.00 0.00 2.85
66 67 3.316588 CGATACAGGCTAGCTGAGAAGAA 59.683 47.826 15.72 0.00 0.00 2.52
67 68 2.881513 CGATACAGGCTAGCTGAGAAGA 59.118 50.000 15.72 0.00 0.00 2.87
68 69 2.030363 CCGATACAGGCTAGCTGAGAAG 60.030 54.545 15.72 1.40 0.00 2.85
69 70 1.957177 CCGATACAGGCTAGCTGAGAA 59.043 52.381 15.72 0.00 0.00 2.87
70 71 1.133761 ACCGATACAGGCTAGCTGAGA 60.134 52.381 15.72 5.54 33.69 3.27
71 72 1.000827 CACCGATACAGGCTAGCTGAG 60.001 57.143 15.72 7.34 33.69 3.35
72 73 1.032794 CACCGATACAGGCTAGCTGA 58.967 55.000 15.72 0.00 33.69 4.26
73 74 0.598680 GCACCGATACAGGCTAGCTG 60.599 60.000 15.72 13.05 33.69 4.24
74 75 0.757188 AGCACCGATACAGGCTAGCT 60.757 55.000 15.72 0.00 34.25 3.32
75 76 0.598680 CAGCACCGATACAGGCTAGC 60.599 60.000 6.04 6.04 34.25 3.42
76 77 0.747255 ACAGCACCGATACAGGCTAG 59.253 55.000 0.00 0.00 34.25 3.42
77 78 0.459899 CACAGCACCGATACAGGCTA 59.540 55.000 0.00 0.00 34.25 3.93
78 79 1.219124 CACAGCACCGATACAGGCT 59.781 57.895 0.00 0.00 36.99 4.58
79 80 1.815421 CCACAGCACCGATACAGGC 60.815 63.158 0.00 0.00 33.69 4.85
80 81 0.179100 CTCCACAGCACCGATACAGG 60.179 60.000 0.00 0.00 37.30 4.00
81 82 0.817654 TCTCCACAGCACCGATACAG 59.182 55.000 0.00 0.00 0.00 2.74
82 83 1.204704 CTTCTCCACAGCACCGATACA 59.795 52.381 0.00 0.00 0.00 2.29
83 84 1.476891 TCTTCTCCACAGCACCGATAC 59.523 52.381 0.00 0.00 0.00 2.24
84 85 1.847328 TCTTCTCCACAGCACCGATA 58.153 50.000 0.00 0.00 0.00 2.92
85 86 1.134580 CATCTTCTCCACAGCACCGAT 60.135 52.381 0.00 0.00 0.00 4.18
86 87 0.247460 CATCTTCTCCACAGCACCGA 59.753 55.000 0.00 0.00 0.00 4.69
87 88 0.036952 ACATCTTCTCCACAGCACCG 60.037 55.000 0.00 0.00 0.00 4.94
88 89 2.191128 AACATCTTCTCCACAGCACC 57.809 50.000 0.00 0.00 0.00 5.01
89 90 5.163713 GGAATAAACATCTTCTCCACAGCAC 60.164 44.000 0.00 0.00 0.00 4.40
90 91 4.943705 GGAATAAACATCTTCTCCACAGCA 59.056 41.667 0.00 0.00 0.00 4.41
91 92 4.943705 TGGAATAAACATCTTCTCCACAGC 59.056 41.667 0.00 0.00 0.00 4.40
92 93 5.587844 CCTGGAATAAACATCTTCTCCACAG 59.412 44.000 0.00 0.00 0.00 3.66
93 94 5.250543 TCCTGGAATAAACATCTTCTCCACA 59.749 40.000 0.00 0.00 0.00 4.17
94 95 5.745227 TCCTGGAATAAACATCTTCTCCAC 58.255 41.667 0.00 0.00 0.00 4.02
95 96 6.387192 TTCCTGGAATAAACATCTTCTCCA 57.613 37.500 4.68 0.00 0.00 3.86
96 97 7.888250 ATTTCCTGGAATAAACATCTTCTCC 57.112 36.000 10.45 0.00 0.00 3.71
131 132 4.802039 ACACTCAAAGGCGTTATATGTACG 59.198 41.667 7.58 7.58 41.71 3.67
132 133 6.657836 AACACTCAAAGGCGTTATATGTAC 57.342 37.500 0.00 0.00 0.00 2.90
133 134 8.774890 TTTAACACTCAAAGGCGTTATATGTA 57.225 30.769 0.00 0.00 0.00 2.29
134 135 7.675962 TTTAACACTCAAAGGCGTTATATGT 57.324 32.000 0.00 0.00 0.00 2.29
135 136 9.009327 CATTTTAACACTCAAAGGCGTTATATG 57.991 33.333 0.00 0.00 0.00 1.78
136 137 7.700656 GCATTTTAACACTCAAAGGCGTTATAT 59.299 33.333 0.00 0.00 30.84 0.86
137 138 7.024768 GCATTTTAACACTCAAAGGCGTTATA 58.975 34.615 0.00 0.00 30.84 0.98
138 139 5.861787 GCATTTTAACACTCAAAGGCGTTAT 59.138 36.000 0.00 0.00 30.84 1.89
139 140 5.216648 GCATTTTAACACTCAAAGGCGTTA 58.783 37.500 0.00 0.00 30.84 3.18
140 141 4.048504 GCATTTTAACACTCAAAGGCGTT 58.951 39.130 0.00 0.00 30.84 4.84
141 142 3.067461 TGCATTTTAACACTCAAAGGCGT 59.933 39.130 0.00 0.00 41.46 5.68
142 143 3.637432 TGCATTTTAACACTCAAAGGCG 58.363 40.909 0.00 0.00 41.46 5.52
143 144 6.389906 AGTATGCATTTTAACACTCAAAGGC 58.610 36.000 3.54 0.00 39.54 4.35
144 145 7.867403 ACAAGTATGCATTTTAACACTCAAAGG 59.133 33.333 3.54 0.00 0.00 3.11
145 146 8.801715 ACAAGTATGCATTTTAACACTCAAAG 57.198 30.769 3.54 0.00 0.00 2.77
156 157 9.533253 GCCTTCATAATTACAAGTATGCATTTT 57.467 29.630 3.54 0.00 37.01 1.82
157 158 7.862372 CGCCTTCATAATTACAAGTATGCATTT 59.138 33.333 3.54 0.00 37.01 2.32
158 159 7.013274 ACGCCTTCATAATTACAAGTATGCATT 59.987 33.333 3.54 0.00 37.01 3.56
159 160 6.486657 ACGCCTTCATAATTACAAGTATGCAT 59.513 34.615 3.79 3.79 37.01 3.96
160 161 5.820423 ACGCCTTCATAATTACAAGTATGCA 59.180 36.000 4.88 0.00 37.01 3.96
161 162 6.300354 ACGCCTTCATAATTACAAGTATGC 57.700 37.500 4.88 0.00 37.01 3.14
162 163 9.042008 ACTAACGCCTTCATAATTACAAGTATG 57.958 33.333 3.60 3.60 38.07 2.39
163 164 9.257651 GACTAACGCCTTCATAATTACAAGTAT 57.742 33.333 0.00 0.00 0.00 2.12
164 165 8.252417 TGACTAACGCCTTCATAATTACAAGTA 58.748 33.333 0.00 0.00 0.00 2.24
165 166 7.101054 TGACTAACGCCTTCATAATTACAAGT 58.899 34.615 0.00 0.00 0.00 3.16
166 167 7.534085 TGACTAACGCCTTCATAATTACAAG 57.466 36.000 0.00 0.00 0.00 3.16
167 168 7.908827 TTGACTAACGCCTTCATAATTACAA 57.091 32.000 0.00 0.00 0.00 2.41
168 169 7.908827 TTTGACTAACGCCTTCATAATTACA 57.091 32.000 0.00 0.00 0.00 2.41
169 170 9.783256 AAATTTGACTAACGCCTTCATAATTAC 57.217 29.630 0.00 0.00 0.00 1.89
171 172 9.705290 AAAAATTTGACTAACGCCTTCATAATT 57.295 25.926 0.00 0.00 0.00 1.40
173 174 9.834628 CTAAAAATTTGACTAACGCCTTCATAA 57.165 29.630 0.00 0.00 0.00 1.90
174 175 7.966204 GCTAAAAATTTGACTAACGCCTTCATA 59.034 33.333 0.00 0.00 0.00 2.15
175 176 6.806739 GCTAAAAATTTGACTAACGCCTTCAT 59.193 34.615 0.00 0.00 0.00 2.57
176 177 6.146898 GCTAAAAATTTGACTAACGCCTTCA 58.853 36.000 0.00 0.00 0.00 3.02
177 178 5.571741 GGCTAAAAATTTGACTAACGCCTTC 59.428 40.000 0.00 0.00 0.00 3.46
178 179 5.466819 GGCTAAAAATTTGACTAACGCCTT 58.533 37.500 0.00 0.00 0.00 4.35
179 180 4.379082 CGGCTAAAAATTTGACTAACGCCT 60.379 41.667 0.00 0.00 0.00 5.52
180 181 3.849708 CGGCTAAAAATTTGACTAACGCC 59.150 43.478 0.00 0.00 0.00 5.68
181 182 4.469552 ACGGCTAAAAATTTGACTAACGC 58.530 39.130 0.00 0.00 0.00 4.84
182 183 5.084055 GGACGGCTAAAAATTTGACTAACG 58.916 41.667 0.00 0.00 0.00 3.18
183 184 5.084055 CGGACGGCTAAAAATTTGACTAAC 58.916 41.667 0.00 0.00 0.00 2.34
184 185 4.996122 TCGGACGGCTAAAAATTTGACTAA 59.004 37.500 0.00 0.00 0.00 2.24
185 186 4.567971 TCGGACGGCTAAAAATTTGACTA 58.432 39.130 0.00 0.00 0.00 2.59
186 187 3.404899 TCGGACGGCTAAAAATTTGACT 58.595 40.909 0.00 0.00 0.00 3.41
187 188 3.817148 TCGGACGGCTAAAAATTTGAC 57.183 42.857 0.00 0.00 0.00 3.18
188 189 4.258543 AGATCGGACGGCTAAAAATTTGA 58.741 39.130 0.00 0.00 0.00 2.69
189 190 4.094294 TGAGATCGGACGGCTAAAAATTTG 59.906 41.667 0.00 0.00 0.00 2.32
190 191 4.258543 TGAGATCGGACGGCTAAAAATTT 58.741 39.130 0.00 0.00 0.00 1.82
191 192 3.869065 TGAGATCGGACGGCTAAAAATT 58.131 40.909 0.00 0.00 0.00 1.82
192 193 3.536956 TGAGATCGGACGGCTAAAAAT 57.463 42.857 0.00 0.00 0.00 1.82
193 194 3.322211 TTGAGATCGGACGGCTAAAAA 57.678 42.857 0.00 0.00 0.00 1.94
194 195 3.454375 GATTGAGATCGGACGGCTAAAA 58.546 45.455 0.00 0.00 0.00 1.52
195 196 2.223971 GGATTGAGATCGGACGGCTAAA 60.224 50.000 0.00 0.00 32.84 1.85
196 197 1.340248 GGATTGAGATCGGACGGCTAA 59.660 52.381 0.00 0.00 32.84 3.09
197 198 0.959553 GGATTGAGATCGGACGGCTA 59.040 55.000 0.00 0.00 32.84 3.93
198 199 1.043116 TGGATTGAGATCGGACGGCT 61.043 55.000 0.00 0.00 32.84 5.52
199 200 0.179084 TTGGATTGAGATCGGACGGC 60.179 55.000 0.00 0.00 32.84 5.68
200 201 2.138320 CATTGGATTGAGATCGGACGG 58.862 52.381 0.00 0.00 32.84 4.79
201 202 2.138320 CCATTGGATTGAGATCGGACG 58.862 52.381 0.00 0.00 32.84 4.79
202 203 3.199880 ACCATTGGATTGAGATCGGAC 57.800 47.619 10.37 0.00 32.84 4.79
203 204 3.054434 ACAACCATTGGATTGAGATCGGA 60.054 43.478 10.37 0.00 32.84 4.55
204 205 3.282021 ACAACCATTGGATTGAGATCGG 58.718 45.455 10.37 0.00 32.84 4.18
205 206 4.156556 ACAACAACCATTGGATTGAGATCG 59.843 41.667 10.37 3.59 33.63 3.69
206 207 5.649782 ACAACAACCATTGGATTGAGATC 57.350 39.130 10.37 0.00 33.63 2.75
207 208 6.423776 AAACAACAACCATTGGATTGAGAT 57.576 33.333 10.37 2.18 33.63 2.75
208 209 5.867903 AAACAACAACCATTGGATTGAGA 57.132 34.783 10.37 0.00 33.63 3.27
209 210 6.923928 AAAAACAACAACCATTGGATTGAG 57.076 33.333 10.37 10.39 33.63 3.02
229 230 5.551977 AGGAAAGTGATAGGGAGGAGAAAAA 59.448 40.000 0.00 0.00 0.00 1.94
230 231 5.101529 AGGAAAGTGATAGGGAGGAGAAAA 58.898 41.667 0.00 0.00 0.00 2.29
231 232 4.699994 AGGAAAGTGATAGGGAGGAGAAA 58.300 43.478 0.00 0.00 0.00 2.52
232 233 4.290942 GAGGAAAGTGATAGGGAGGAGAA 58.709 47.826 0.00 0.00 0.00 2.87
233 234 3.374318 GGAGGAAAGTGATAGGGAGGAGA 60.374 52.174 0.00 0.00 0.00 3.71
234 235 2.969262 GGAGGAAAGTGATAGGGAGGAG 59.031 54.545 0.00 0.00 0.00 3.69
235 236 2.317900 TGGAGGAAAGTGATAGGGAGGA 59.682 50.000 0.00 0.00 0.00 3.71
236 237 2.703007 CTGGAGGAAAGTGATAGGGAGG 59.297 54.545 0.00 0.00 0.00 4.30
237 238 2.103941 GCTGGAGGAAAGTGATAGGGAG 59.896 54.545 0.00 0.00 0.00 4.30
238 239 2.119495 GCTGGAGGAAAGTGATAGGGA 58.881 52.381 0.00 0.00 0.00 4.20
239 240 1.141858 GGCTGGAGGAAAGTGATAGGG 59.858 57.143 0.00 0.00 0.00 3.53
240 241 2.103941 GAGGCTGGAGGAAAGTGATAGG 59.896 54.545 0.00 0.00 0.00 2.57
241 242 2.103941 GGAGGCTGGAGGAAAGTGATAG 59.896 54.545 0.00 0.00 0.00 2.08
242 243 2.119495 GGAGGCTGGAGGAAAGTGATA 58.881 52.381 0.00 0.00 0.00 2.15
243 244 0.915364 GGAGGCTGGAGGAAAGTGAT 59.085 55.000 0.00 0.00 0.00 3.06
244 245 0.178891 AGGAGGCTGGAGGAAAGTGA 60.179 55.000 0.00 0.00 0.00 3.41
245 246 0.695347 AAGGAGGCTGGAGGAAAGTG 59.305 55.000 0.00 0.00 0.00 3.16
246 247 0.988063 GAAGGAGGCTGGAGGAAAGT 59.012 55.000 0.00 0.00 0.00 2.66
247 248 0.254462 GGAAGGAGGCTGGAGGAAAG 59.746 60.000 0.00 0.00 0.00 2.62
248 249 0.475632 TGGAAGGAGGCTGGAGGAAA 60.476 55.000 0.00 0.00 0.00 3.13
249 250 0.475632 TTGGAAGGAGGCTGGAGGAA 60.476 55.000 0.00 0.00 0.00 3.36
250 251 1.160870 TTGGAAGGAGGCTGGAGGA 59.839 57.895 0.00 0.00 0.00 3.71
251 252 1.301293 GTTGGAAGGAGGCTGGAGG 59.699 63.158 0.00 0.00 0.00 4.30
252 253 1.301293 GGTTGGAAGGAGGCTGGAG 59.699 63.158 0.00 0.00 0.00 3.86
253 254 2.231380 GGGTTGGAAGGAGGCTGGA 61.231 63.158 0.00 0.00 0.00 3.86
254 255 1.867595 ATGGGTTGGAAGGAGGCTGG 61.868 60.000 0.00 0.00 0.00 4.85
255 256 0.682209 CATGGGTTGGAAGGAGGCTG 60.682 60.000 0.00 0.00 0.00 4.85
256 257 1.142688 ACATGGGTTGGAAGGAGGCT 61.143 55.000 0.00 0.00 0.00 4.58
257 258 0.681243 GACATGGGTTGGAAGGAGGC 60.681 60.000 0.00 0.00 0.00 4.70
258 259 0.392998 CGACATGGGTTGGAAGGAGG 60.393 60.000 0.00 0.00 0.00 4.30
259 260 3.159298 CGACATGGGTTGGAAGGAG 57.841 57.895 0.00 0.00 0.00 3.69
279 280 1.301009 GACTATGTAGGCAGGCGGC 60.301 63.158 0.00 0.00 43.74 6.53
280 281 1.007271 CGACTATGTAGGCAGGCGG 60.007 63.158 0.00 0.00 0.00 6.13
281 282 1.007271 CCGACTATGTAGGCAGGCG 60.007 63.158 0.00 0.00 0.00 5.52
282 283 1.113517 TCCCGACTATGTAGGCAGGC 61.114 60.000 0.00 0.00 0.00 4.85
283 284 0.962489 CTCCCGACTATGTAGGCAGG 59.038 60.000 0.00 0.00 0.00 4.85
284 285 0.315568 GCTCCCGACTATGTAGGCAG 59.684 60.000 0.00 0.00 0.00 4.85
285 286 1.452953 CGCTCCCGACTATGTAGGCA 61.453 60.000 0.00 0.00 36.29 4.75
286 287 1.286260 CGCTCCCGACTATGTAGGC 59.714 63.158 0.00 0.00 36.29 3.93
287 288 1.286260 GCGCTCCCGACTATGTAGG 59.714 63.158 0.00 0.00 36.29 3.18
288 289 0.039978 CTGCGCTCCCGACTATGTAG 60.040 60.000 9.73 0.00 36.29 2.74
289 290 2.030551 CTGCGCTCCCGACTATGTA 58.969 57.895 9.73 0.00 36.29 2.29
290 291 2.808315 CTGCGCTCCCGACTATGT 59.192 61.111 9.73 0.00 36.29 2.29
291 292 2.659897 GCTGCGCTCCCGACTATG 60.660 66.667 9.73 0.00 36.29 2.23
292 293 3.917760 GGCTGCGCTCCCGACTAT 61.918 66.667 9.73 0.00 36.29 2.12
313 314 4.758488 ACGAGAGTGATGCAACAAGGCA 62.758 50.000 0.00 0.00 46.74 4.75
314 315 0.445436 CGAGAGTGATGCAACAAGGC 59.555 55.000 0.00 0.00 0.00 4.35
315 316 1.800805 ACGAGAGTGATGCAACAAGG 58.199 50.000 0.00 0.00 46.97 3.61
328 329 3.550656 GGAACGCAACCACGAGAG 58.449 61.111 0.00 0.00 36.70 3.20
341 342 2.660900 CGTGTCGGTTGATTTTCGGAAC 60.661 50.000 0.00 0.00 0.00 3.62
342 343 1.527736 CGTGTCGGTTGATTTTCGGAA 59.472 47.619 0.00 0.00 0.00 4.30
343 344 1.141645 CGTGTCGGTTGATTTTCGGA 58.858 50.000 0.00 0.00 0.00 4.55
344 345 1.141645 TCGTGTCGGTTGATTTTCGG 58.858 50.000 0.00 0.00 0.00 4.30
345 346 2.934107 TTCGTGTCGGTTGATTTTCG 57.066 45.000 0.00 0.00 0.00 3.46
346 347 3.360758 GCAATTCGTGTCGGTTGATTTTC 59.639 43.478 10.42 0.00 0.00 2.29
347 348 3.243234 TGCAATTCGTGTCGGTTGATTTT 60.243 39.130 10.42 0.00 0.00 1.82
348 349 2.292016 TGCAATTCGTGTCGGTTGATTT 59.708 40.909 10.42 0.00 0.00 2.17
349 350 1.876799 TGCAATTCGTGTCGGTTGATT 59.123 42.857 10.42 0.00 0.00 2.57
350 351 1.518325 TGCAATTCGTGTCGGTTGAT 58.482 45.000 10.42 0.00 0.00 2.57
351 352 1.300481 TTGCAATTCGTGTCGGTTGA 58.700 45.000 0.00 0.00 0.00 3.18
352 353 2.112475 TTTGCAATTCGTGTCGGTTG 57.888 45.000 0.00 0.00 0.00 3.77
353 354 3.243234 TGAATTTGCAATTCGTGTCGGTT 60.243 39.130 0.00 0.00 0.00 4.44
354 355 2.292016 TGAATTTGCAATTCGTGTCGGT 59.708 40.909 0.00 0.00 0.00 4.69
355 356 2.910482 CTGAATTTGCAATTCGTGTCGG 59.090 45.455 0.00 0.00 0.00 4.79
356 357 2.910482 CCTGAATTTGCAATTCGTGTCG 59.090 45.455 0.00 0.00 0.00 4.35
357 358 2.663119 GCCTGAATTTGCAATTCGTGTC 59.337 45.455 0.00 0.00 0.00 3.67
358 359 2.035704 TGCCTGAATTTGCAATTCGTGT 59.964 40.909 0.00 0.00 33.87 4.49
359 360 2.674954 TGCCTGAATTTGCAATTCGTG 58.325 42.857 0.00 3.50 33.87 4.35
360 361 3.383620 TTGCCTGAATTTGCAATTCGT 57.616 38.095 0.00 0.00 42.19 3.85
368 369 4.510038 ACTAGCAAGTTGCCTGAATTTG 57.490 40.909 24.02 8.16 46.52 2.32
369 370 5.945784 TGATACTAGCAAGTTGCCTGAATTT 59.054 36.000 24.02 6.49 46.52 1.82
370 371 5.500234 TGATACTAGCAAGTTGCCTGAATT 58.500 37.500 24.02 7.24 46.52 2.17
371 372 5.102953 TGATACTAGCAAGTTGCCTGAAT 57.897 39.130 24.02 12.86 46.52 2.57
372 373 4.222810 TCTGATACTAGCAAGTTGCCTGAA 59.777 41.667 24.02 8.51 46.52 3.02
373 374 3.769300 TCTGATACTAGCAAGTTGCCTGA 59.231 43.478 24.02 13.33 46.52 3.86
374 375 3.868077 GTCTGATACTAGCAAGTTGCCTG 59.132 47.826 24.02 18.32 46.52 4.85
375 376 3.515502 TGTCTGATACTAGCAAGTTGCCT 59.484 43.478 24.02 13.65 46.52 4.75
376 377 3.861840 TGTCTGATACTAGCAAGTTGCC 58.138 45.455 24.02 8.33 46.52 4.52
377 378 5.111989 TCATGTCTGATACTAGCAAGTTGC 58.888 41.667 20.44 20.44 45.46 4.17
378 379 7.601073 TTTCATGTCTGATACTAGCAAGTTG 57.399 36.000 0.00 0.00 37.15 3.16
379 380 8.621532 TTTTTCATGTCTGATACTAGCAAGTT 57.378 30.769 0.00 0.00 37.15 2.66
405 406 3.061429 CCGTGTTCGCATTTTGTGTTTTT 59.939 39.130 0.00 0.00 35.54 1.94
406 407 2.600867 CCGTGTTCGCATTTTGTGTTTT 59.399 40.909 0.00 0.00 35.54 2.43
407 408 2.159366 TCCGTGTTCGCATTTTGTGTTT 60.159 40.909 0.00 0.00 35.54 2.83
408 409 1.402259 TCCGTGTTCGCATTTTGTGTT 59.598 42.857 0.00 0.00 35.54 3.32
409 410 1.002900 CTCCGTGTTCGCATTTTGTGT 60.003 47.619 0.00 0.00 35.54 3.72
410 411 1.002900 ACTCCGTGTTCGCATTTTGTG 60.003 47.619 0.00 0.00 35.54 3.33
411 412 1.305201 ACTCCGTGTTCGCATTTTGT 58.695 45.000 0.00 0.00 35.54 2.83
412 413 3.370978 AGATACTCCGTGTTCGCATTTTG 59.629 43.478 0.00 0.00 35.54 2.44
413 414 3.370978 CAGATACTCCGTGTTCGCATTTT 59.629 43.478 0.00 0.00 35.54 1.82
414 415 2.930040 CAGATACTCCGTGTTCGCATTT 59.070 45.455 0.00 0.00 35.54 2.32
415 416 2.165641 TCAGATACTCCGTGTTCGCATT 59.834 45.455 0.00 0.00 35.54 3.56
416 417 1.749063 TCAGATACTCCGTGTTCGCAT 59.251 47.619 0.00 0.00 35.54 4.73
417 418 1.132453 CTCAGATACTCCGTGTTCGCA 59.868 52.381 0.00 0.00 35.54 5.10
418 419 1.828832 CTCAGATACTCCGTGTTCGC 58.171 55.000 0.00 0.00 35.54 4.70
419 420 1.402259 AGCTCAGATACTCCGTGTTCG 59.598 52.381 0.00 0.00 0.00 3.95
420 421 2.539953 CGAGCTCAGATACTCCGTGTTC 60.540 54.545 15.40 0.00 0.00 3.18
421 422 1.402259 CGAGCTCAGATACTCCGTGTT 59.598 52.381 15.40 0.00 0.00 3.32
422 423 1.018148 CGAGCTCAGATACTCCGTGT 58.982 55.000 15.40 0.00 0.00 4.49
423 424 1.300481 TCGAGCTCAGATACTCCGTG 58.700 55.000 15.40 0.00 0.00 4.94
424 425 1.671845 GTTCGAGCTCAGATACTCCGT 59.328 52.381 15.40 0.00 0.00 4.69
425 426 1.944024 AGTTCGAGCTCAGATACTCCG 59.056 52.381 15.40 0.00 0.00 4.63
426 427 2.946329 TGAGTTCGAGCTCAGATACTCC 59.054 50.000 25.80 0.07 40.23 3.85
427 428 4.624336 TTGAGTTCGAGCTCAGATACTC 57.376 45.455 27.42 23.64 45.03 2.59
428 429 5.126222 TCATTTGAGTTCGAGCTCAGATACT 59.874 40.000 27.18 10.74 45.03 2.12
429 430 5.344066 TCATTTGAGTTCGAGCTCAGATAC 58.656 41.667 27.18 5.84 45.03 2.24
430 431 5.451103 CCTCATTTGAGTTCGAGCTCAGATA 60.451 44.000 27.18 19.03 45.03 1.98
431 432 4.431809 CTCATTTGAGTTCGAGCTCAGAT 58.568 43.478 27.42 25.54 45.03 2.90
432 433 3.367806 CCTCATTTGAGTTCGAGCTCAGA 60.368 47.826 27.42 24.57 45.03 3.27
433 434 2.928757 CCTCATTTGAGTTCGAGCTCAG 59.071 50.000 27.42 18.35 45.03 3.35
434 435 2.300152 ACCTCATTTGAGTTCGAGCTCA 59.700 45.455 25.80 25.80 43.03 4.26
435 436 2.966050 ACCTCATTTGAGTTCGAGCTC 58.034 47.619 21.09 21.09 40.48 4.09
436 437 3.070018 CAACCTCATTTGAGTTCGAGCT 58.930 45.455 0.00 0.00 40.48 4.09
437 438 2.160417 CCAACCTCATTTGAGTTCGAGC 59.840 50.000 6.81 0.00 40.48 5.03
438 439 3.664107 TCCAACCTCATTTGAGTTCGAG 58.336 45.455 6.81 0.00 40.48 4.04
439 440 3.762407 TCCAACCTCATTTGAGTTCGA 57.238 42.857 6.81 0.00 40.48 3.71
440 441 4.002982 TCATCCAACCTCATTTGAGTTCG 58.997 43.478 6.81 0.00 40.48 3.95
441 442 5.964958 TTCATCCAACCTCATTTGAGTTC 57.035 39.130 6.81 0.00 40.48 3.01
442 443 7.177878 ACTATTCATCCAACCTCATTTGAGTT 58.822 34.615 6.81 0.00 40.48 3.01
443 444 6.725364 ACTATTCATCCAACCTCATTTGAGT 58.275 36.000 6.81 0.00 40.48 3.41
444 445 8.737168 TTACTATTCATCCAACCTCATTTGAG 57.263 34.615 0.39 0.39 41.71 3.02
445 446 9.527157 TTTTACTATTCATCCAACCTCATTTGA 57.473 29.630 0.00 0.00 0.00 2.69
448 449 8.840321 CGATTTTACTATTCATCCAACCTCATT 58.160 33.333 0.00 0.00 0.00 2.57
449 450 8.210946 TCGATTTTACTATTCATCCAACCTCAT 58.789 33.333 0.00 0.00 0.00 2.90
450 451 7.561251 TCGATTTTACTATTCATCCAACCTCA 58.439 34.615 0.00 0.00 0.00 3.86
451 452 8.433421 TTCGATTTTACTATTCATCCAACCTC 57.567 34.615 0.00 0.00 0.00 3.85
452 453 8.801882 TTTCGATTTTACTATTCATCCAACCT 57.198 30.769 0.00 0.00 0.00 3.50
453 454 8.889717 TCTTTCGATTTTACTATTCATCCAACC 58.110 33.333 0.00 0.00 0.00 3.77
456 457 9.884636 TCTTCTTTCGATTTTACTATTCATCCA 57.115 29.630 0.00 0.00 0.00 3.41
515 516 9.665719 ACTTCAAAAATTGTCAAAGTTTACCAT 57.334 25.926 0.00 0.00 32.69 3.55
516 517 8.930760 CACTTCAAAAATTGTCAAAGTTTACCA 58.069 29.630 0.00 0.00 32.69 3.25
517 518 7.902917 GCACTTCAAAAATTGTCAAAGTTTACC 59.097 33.333 0.00 0.00 32.69 2.85
518 519 8.655970 AGCACTTCAAAAATTGTCAAAGTTTAC 58.344 29.630 0.00 0.00 32.69 2.01
519 520 8.770438 AGCACTTCAAAAATTGTCAAAGTTTA 57.230 26.923 0.00 0.00 32.69 2.01
520 521 7.671495 AGCACTTCAAAAATTGTCAAAGTTT 57.329 28.000 0.00 0.00 35.20 2.66
521 522 7.520686 CAAGCACTTCAAAAATTGTCAAAGTT 58.479 30.769 0.00 0.00 0.00 2.66
522 523 6.402442 GCAAGCACTTCAAAAATTGTCAAAGT 60.402 34.615 0.00 0.00 0.00 2.66
523 524 5.961263 GCAAGCACTTCAAAAATTGTCAAAG 59.039 36.000 0.00 0.00 0.00 2.77
524 525 5.410746 TGCAAGCACTTCAAAAATTGTCAAA 59.589 32.000 0.00 0.00 0.00 2.69
525 526 4.934001 TGCAAGCACTTCAAAAATTGTCAA 59.066 33.333 0.00 0.00 0.00 3.18
526 527 4.502016 TGCAAGCACTTCAAAAATTGTCA 58.498 34.783 0.00 0.00 0.00 3.58
527 528 5.467902 TTGCAAGCACTTCAAAAATTGTC 57.532 34.783 0.00 0.00 0.00 3.18
528 529 5.876612 TTTGCAAGCACTTCAAAAATTGT 57.123 30.435 0.00 0.00 0.00 2.71
529 530 7.743520 AAATTTGCAAGCACTTCAAAAATTG 57.256 28.000 0.00 0.00 34.00 2.32
530 531 8.760103 AAAAATTTGCAAGCACTTCAAAAATT 57.240 23.077 0.00 0.00 34.00 1.82
531 532 9.505995 CTAAAAATTTGCAAGCACTTCAAAAAT 57.494 25.926 0.00 0.00 34.00 1.82
532 533 7.484324 GCTAAAAATTTGCAAGCACTTCAAAAA 59.516 29.630 12.39 0.00 34.00 1.94
533 534 6.966066 GCTAAAAATTTGCAAGCACTTCAAAA 59.034 30.769 12.39 2.44 34.00 2.44
534 535 6.093219 TGCTAAAAATTTGCAAGCACTTCAAA 59.907 30.769 14.85 9.08 38.22 2.69
535 536 5.583854 TGCTAAAAATTTGCAAGCACTTCAA 59.416 32.000 14.85 0.00 38.22 2.69
536 537 5.114780 TGCTAAAAATTTGCAAGCACTTCA 58.885 33.333 14.85 0.00 38.22 3.02
537 538 5.655893 TGCTAAAAATTTGCAAGCACTTC 57.344 34.783 14.85 0.00 38.22 3.01
538 539 5.759273 TCATGCTAAAAATTTGCAAGCACTT 59.241 32.000 18.98 7.05 45.18 3.16
539 540 5.299148 TCATGCTAAAAATTTGCAAGCACT 58.701 33.333 18.98 9.81 45.18 4.40
540 541 5.406175 TCTCATGCTAAAAATTTGCAAGCAC 59.594 36.000 18.98 0.00 45.18 4.40
541 542 5.539979 TCTCATGCTAAAAATTTGCAAGCA 58.460 33.333 18.92 18.92 46.30 3.91
542 543 6.311935 TGATCTCATGCTAAAAATTTGCAAGC 59.688 34.615 5.85 8.71 40.24 4.01
543 544 7.329962 TGTGATCTCATGCTAAAAATTTGCAAG 59.670 33.333 5.85 2.49 40.24 4.01
544 545 7.153315 TGTGATCTCATGCTAAAAATTTGCAA 58.847 30.769 5.85 0.00 40.24 4.08
545 546 6.689554 TGTGATCTCATGCTAAAAATTTGCA 58.310 32.000 4.37 4.37 41.13 4.08
546 547 7.766219 ATGTGATCTCATGCTAAAAATTTGC 57.234 32.000 9.41 0.00 0.00 3.68
554 555 9.716531 CCTTCTATTAATGTGATCTCATGCTAA 57.283 33.333 10.87 7.50 0.00 3.09
555 556 7.821359 GCCTTCTATTAATGTGATCTCATGCTA 59.179 37.037 10.87 0.00 0.00 3.49
556 557 6.654161 GCCTTCTATTAATGTGATCTCATGCT 59.346 38.462 10.87 0.00 0.00 3.79
557 558 6.401903 CGCCTTCTATTAATGTGATCTCATGC 60.402 42.308 10.87 6.07 0.00 4.06
558 559 6.648310 ACGCCTTCTATTAATGTGATCTCATG 59.352 38.462 10.87 0.00 0.00 3.07
559 560 6.648310 CACGCCTTCTATTAATGTGATCTCAT 59.352 38.462 4.42 4.42 0.00 2.90
560 561 5.985530 CACGCCTTCTATTAATGTGATCTCA 59.014 40.000 0.00 0.00 0.00 3.27
561 562 6.144724 GTCACGCCTTCTATTAATGTGATCTC 59.855 42.308 0.00 0.00 37.24 2.75
562 563 5.986135 GTCACGCCTTCTATTAATGTGATCT 59.014 40.000 0.00 0.00 37.24 2.75
563 564 5.753438 TGTCACGCCTTCTATTAATGTGATC 59.247 40.000 0.00 0.00 37.24 2.92
564 565 5.670485 TGTCACGCCTTCTATTAATGTGAT 58.330 37.500 0.00 0.00 37.24 3.06
565 566 5.079689 TGTCACGCCTTCTATTAATGTGA 57.920 39.130 0.00 0.00 32.93 3.58
566 567 5.794687 TTGTCACGCCTTCTATTAATGTG 57.205 39.130 0.00 0.00 0.00 3.21
567 568 6.811253 TTTTGTCACGCCTTCTATTAATGT 57.189 33.333 0.00 0.00 0.00 2.71
588 589 3.189287 GCAGTGTCTCGACCATGATTTTT 59.811 43.478 0.00 0.00 0.00 1.94
589 590 2.744202 GCAGTGTCTCGACCATGATTTT 59.256 45.455 0.00 0.00 0.00 1.82
590 591 2.289631 TGCAGTGTCTCGACCATGATTT 60.290 45.455 0.00 0.00 0.00 2.17
591 592 1.276138 TGCAGTGTCTCGACCATGATT 59.724 47.619 0.00 0.00 0.00 2.57
592 593 0.897621 TGCAGTGTCTCGACCATGAT 59.102 50.000 0.00 0.00 0.00 2.45
593 594 0.897621 ATGCAGTGTCTCGACCATGA 59.102 50.000 0.00 0.00 0.00 3.07
594 595 2.467838 CTATGCAGTGTCTCGACCATG 58.532 52.381 0.00 0.00 0.00 3.66
595 596 1.202463 GCTATGCAGTGTCTCGACCAT 60.202 52.381 0.00 0.00 0.00 3.55
596 597 0.173481 GCTATGCAGTGTCTCGACCA 59.827 55.000 0.00 0.00 0.00 4.02
597 598 0.173481 TGCTATGCAGTGTCTCGACC 59.827 55.000 0.00 0.00 33.32 4.79
598 599 1.923204 CTTGCTATGCAGTGTCTCGAC 59.077 52.381 0.00 0.00 40.61 4.20
599 600 1.134995 CCTTGCTATGCAGTGTCTCGA 60.135 52.381 0.00 0.00 40.61 4.04
600 601 1.284657 CCTTGCTATGCAGTGTCTCG 58.715 55.000 0.00 0.00 40.61 4.04
654 655 2.926586 GCCCGAAAAAGAATTGCAGTCC 60.927 50.000 0.00 0.00 0.00 3.85
677 678 6.461110 AATTGCTAAACTTGATCTGATGGG 57.539 37.500 0.00 0.00 0.00 4.00
721 804 3.615496 GTGCATGAATGATCAACAAAGCC 59.385 43.478 20.02 13.18 39.49 4.35
901 1042 0.615544 CCCATGGAGTTGGCCACATT 60.616 55.000 15.22 0.00 41.56 2.71
993 1174 1.521450 GGGCATCATCCATTGCTCCG 61.521 60.000 0.00 0.00 38.88 4.63
994 1175 0.178970 AGGGCATCATCCATTGCTCC 60.179 55.000 0.00 0.00 40.30 4.70
1012 1198 2.593978 CCCCCATGACAGCTCCAG 59.406 66.667 0.00 0.00 0.00 3.86
1365 1929 1.683790 CGTCGACGTTGAAGATGCCC 61.684 60.000 29.08 0.00 34.11 5.36
1520 2084 3.948719 GGTCGACCACCTTGCCCA 61.949 66.667 29.75 0.00 42.84 5.36
2289 3355 2.235402 CTGGAACACCGGGTACTTGTAT 59.765 50.000 6.32 0.00 0.00 2.29
2376 3442 1.300620 CTCGAACGCCTTCACCACA 60.301 57.895 0.00 0.00 0.00 4.17
2394 3460 0.836400 TCTCTCCAACCACCTCCACC 60.836 60.000 0.00 0.00 0.00 4.61
2493 3559 7.144661 TGAATTATGAATTTTGAGTTGTGCGT 58.855 30.769 0.00 0.00 0.00 5.24
2522 3594 7.329717 CGCATTCTATAAACCATTCTCCTAGTC 59.670 40.741 0.00 0.00 0.00 2.59
2524 3596 7.116948 CACGCATTCTATAAACCATTCTCCTAG 59.883 40.741 0.00 0.00 0.00 3.02
2532 3608 5.772825 AATGCACGCATTCTATAAACCAT 57.227 34.783 11.41 0.00 42.32 3.55
2541 3617 3.698029 GTGGATTAATGCACGCATTCT 57.302 42.857 22.09 9.58 44.50 2.40
2550 3626 3.840890 TGTTCAACCGTGGATTAATGC 57.159 42.857 0.00 0.00 0.00 3.56
2551 3627 5.559427 TCATGTTCAACCGTGGATTAATG 57.441 39.130 0.00 0.00 0.00 1.90
2552 3628 7.054124 AGTATCATGTTCAACCGTGGATTAAT 58.946 34.615 0.00 0.00 0.00 1.40
2553 3629 6.411376 AGTATCATGTTCAACCGTGGATTAA 58.589 36.000 0.00 0.00 0.00 1.40
2554 3630 5.984725 AGTATCATGTTCAACCGTGGATTA 58.015 37.500 0.00 0.00 0.00 1.75
2555 3631 4.843728 AGTATCATGTTCAACCGTGGATT 58.156 39.130 0.00 0.00 0.00 3.01
2556 3632 4.487714 AGTATCATGTTCAACCGTGGAT 57.512 40.909 0.00 0.00 0.00 3.41
2557 3633 3.973206 AGTATCATGTTCAACCGTGGA 57.027 42.857 0.00 0.00 0.00 4.02
2558 3634 5.006153 TCTAGTATCATGTTCAACCGTGG 57.994 43.478 0.00 0.00 0.00 4.94
2559 3635 5.520288 CCTTCTAGTATCATGTTCAACCGTG 59.480 44.000 0.00 0.00 0.00 4.94
2560 3636 5.421056 TCCTTCTAGTATCATGTTCAACCGT 59.579 40.000 0.00 0.00 0.00 4.83
2561 3637 5.902681 TCCTTCTAGTATCATGTTCAACCG 58.097 41.667 0.00 0.00 0.00 4.44
2562 3638 7.169982 CGAATCCTTCTAGTATCATGTTCAACC 59.830 40.741 0.00 0.00 0.00 3.77
2563 3639 7.306866 GCGAATCCTTCTAGTATCATGTTCAAC 60.307 40.741 0.00 0.00 0.00 3.18
2564 3640 6.701841 GCGAATCCTTCTAGTATCATGTTCAA 59.298 38.462 0.00 0.00 0.00 2.69
2565 3641 6.216569 GCGAATCCTTCTAGTATCATGTTCA 58.783 40.000 0.00 0.00 0.00 3.18
2566 3642 5.343593 CGCGAATCCTTCTAGTATCATGTTC 59.656 44.000 0.00 0.00 0.00 3.18
2567 3643 5.223382 CGCGAATCCTTCTAGTATCATGTT 58.777 41.667 0.00 0.00 0.00 2.71
2568 3644 4.799678 CGCGAATCCTTCTAGTATCATGT 58.200 43.478 0.00 0.00 0.00 3.21
2569 3645 3.610242 GCGCGAATCCTTCTAGTATCATG 59.390 47.826 12.10 0.00 0.00 3.07
2570 3646 3.670895 CGCGCGAATCCTTCTAGTATCAT 60.671 47.826 28.94 0.00 0.00 2.45
2571 3647 2.350484 CGCGCGAATCCTTCTAGTATCA 60.350 50.000 28.94 0.00 0.00 2.15
2572 3648 2.243407 CGCGCGAATCCTTCTAGTATC 58.757 52.381 28.94 0.00 0.00 2.24
2573 3649 1.666311 GCGCGCGAATCCTTCTAGTAT 60.666 52.381 37.18 0.00 0.00 2.12
2574 3650 0.317603 GCGCGCGAATCCTTCTAGTA 60.318 55.000 37.18 0.00 0.00 1.82
2575 3651 1.589196 GCGCGCGAATCCTTCTAGT 60.589 57.895 37.18 0.00 0.00 2.57
2576 3652 3.225758 GCGCGCGAATCCTTCTAG 58.774 61.111 37.18 0.00 0.00 2.43
2598 3674 4.335647 AGTGTGCTTCCGGGGCAG 62.336 66.667 20.11 7.45 40.54 4.85
2599 3675 4.641645 CAGTGTGCTTCCGGGGCA 62.642 66.667 16.74 16.74 37.36 5.36
2601 3677 4.722700 CCCAGTGTGCTTCCGGGG 62.723 72.222 0.00 0.00 32.88 5.73
2602 3678 4.722700 CCCCAGTGTGCTTCCGGG 62.723 72.222 0.00 0.00 36.59 5.73
2603 3679 2.484287 AATCCCCAGTGTGCTTCCGG 62.484 60.000 0.00 0.00 0.00 5.14
2604 3680 1.002134 AATCCCCAGTGTGCTTCCG 60.002 57.895 0.00 0.00 0.00 4.30
2605 3681 1.598701 GCAATCCCCAGTGTGCTTCC 61.599 60.000 0.00 0.00 34.13 3.46
2606 3682 0.895100 TGCAATCCCCAGTGTGCTTC 60.895 55.000 4.53 0.00 37.87 3.86
2607 3683 0.896940 CTGCAATCCCCAGTGTGCTT 60.897 55.000 4.53 0.00 37.87 3.91
2608 3684 1.303888 CTGCAATCCCCAGTGTGCT 60.304 57.895 4.53 0.00 37.87 4.40
2609 3685 1.604593 ACTGCAATCCCCAGTGTGC 60.605 57.895 0.00 0.00 41.68 4.57
2610 3686 4.828409 ACTGCAATCCCCAGTGTG 57.172 55.556 0.00 0.00 41.68 3.82
2613 3689 0.700564 ATGTCACTGCAATCCCCAGT 59.299 50.000 0.00 0.00 43.92 4.00
2614 3690 1.064906 AGATGTCACTGCAATCCCCAG 60.065 52.381 0.00 0.00 36.41 4.45
2615 3691 0.994247 AGATGTCACTGCAATCCCCA 59.006 50.000 0.00 0.00 0.00 4.96
2616 3692 2.134789 AAGATGTCACTGCAATCCCC 57.865 50.000 0.00 0.00 0.00 4.81
2617 3693 2.424956 GGAAAGATGTCACTGCAATCCC 59.575 50.000 0.00 0.00 0.00 3.85
2618 3694 2.096496 CGGAAAGATGTCACTGCAATCC 59.904 50.000 0.00 0.00 0.00 3.01
2619 3695 2.476854 GCGGAAAGATGTCACTGCAATC 60.477 50.000 0.00 0.00 35.13 2.67
2620 3696 1.470098 GCGGAAAGATGTCACTGCAAT 59.530 47.619 0.00 0.00 35.13 3.56
2621 3697 0.874390 GCGGAAAGATGTCACTGCAA 59.126 50.000 0.00 0.00 35.13 4.08
2622 3698 0.250252 TGCGGAAAGATGTCACTGCA 60.250 50.000 0.00 0.00 41.38 4.41
2623 3699 1.089920 ATGCGGAAAGATGTCACTGC 58.910 50.000 0.00 0.00 35.52 4.40
2624 3700 3.189080 TGAAATGCGGAAAGATGTCACTG 59.811 43.478 0.00 0.00 0.00 3.66
2625 3701 3.411446 TGAAATGCGGAAAGATGTCACT 58.589 40.909 0.00 0.00 0.00 3.41
2626 3702 3.829886 TGAAATGCGGAAAGATGTCAC 57.170 42.857 0.00 0.00 0.00 3.67
2627 3703 4.218200 ACATTGAAATGCGGAAAGATGTCA 59.782 37.500 2.92 0.00 40.04 3.58
2628 3704 4.560035 CACATTGAAATGCGGAAAGATGTC 59.440 41.667 2.92 0.00 40.04 3.06
2629 3705 4.022068 ACACATTGAAATGCGGAAAGATGT 60.022 37.500 2.92 0.00 40.04 3.06
2630 3706 4.487948 ACACATTGAAATGCGGAAAGATG 58.512 39.130 2.92 0.00 40.04 2.90
2631 3707 4.789012 ACACATTGAAATGCGGAAAGAT 57.211 36.364 2.92 0.00 40.04 2.40
2632 3708 4.582701 AACACATTGAAATGCGGAAAGA 57.417 36.364 2.92 0.00 40.04 2.52
2633 3709 4.608890 GCAAACACATTGAAATGCGGAAAG 60.609 41.667 2.92 0.00 41.85 2.62
2634 3710 3.247173 GCAAACACATTGAAATGCGGAAA 59.753 39.130 2.92 0.00 41.85 3.13
2635 3711 2.799412 GCAAACACATTGAAATGCGGAA 59.201 40.909 2.92 0.00 41.85 4.30
2636 3712 2.035704 AGCAAACACATTGAAATGCGGA 59.964 40.909 2.92 0.00 41.85 5.54
2637 3713 2.156117 CAGCAAACACATTGAAATGCGG 59.844 45.455 2.92 0.00 41.85 5.69
2638 3714 3.051327 TCAGCAAACACATTGAAATGCG 58.949 40.909 2.92 0.00 41.85 4.73
2639 3715 5.406767 TTTCAGCAAACACATTGAAATGC 57.593 34.783 2.92 0.00 41.85 3.56
2640 3716 7.416154 AGATTTCAGCAAACACATTGAAATG 57.584 32.000 13.98 1.45 45.31 2.32
2641 3717 8.362639 AGTAGATTTCAGCAAACACATTGAAAT 58.637 29.630 10.13 10.13 46.93 2.17
2642 3718 7.715657 AGTAGATTTCAGCAAACACATTGAAA 58.284 30.769 1.57 1.57 41.85 2.69
2643 3719 7.275888 AGTAGATTTCAGCAAACACATTGAA 57.724 32.000 0.00 0.00 41.85 2.69
2644 3720 6.072508 GGAGTAGATTTCAGCAAACACATTGA 60.073 38.462 0.00 0.00 41.85 2.57
2645 3721 6.088824 GGAGTAGATTTCAGCAAACACATTG 58.911 40.000 0.00 0.00 42.21 2.82
2646 3722 5.183904 GGGAGTAGATTTCAGCAAACACATT 59.816 40.000 0.00 0.00 0.00 2.71
2647 3723 4.702131 GGGAGTAGATTTCAGCAAACACAT 59.298 41.667 0.00 0.00 0.00 3.21
2648 3724 4.072131 GGGAGTAGATTTCAGCAAACACA 58.928 43.478 0.00 0.00 0.00 3.72
2649 3725 4.327680 AGGGAGTAGATTTCAGCAAACAC 58.672 43.478 0.00 0.00 0.00 3.32
2650 3726 4.565652 GGAGGGAGTAGATTTCAGCAAACA 60.566 45.833 0.00 0.00 0.00 2.83
2651 3727 3.942115 GGAGGGAGTAGATTTCAGCAAAC 59.058 47.826 0.00 0.00 0.00 2.93
2652 3728 3.369471 CGGAGGGAGTAGATTTCAGCAAA 60.369 47.826 0.00 0.00 0.00 3.68
2653 3729 2.168521 CGGAGGGAGTAGATTTCAGCAA 59.831 50.000 0.00 0.00 0.00 3.91
2654 3730 1.757118 CGGAGGGAGTAGATTTCAGCA 59.243 52.381 0.00 0.00 0.00 4.41
2655 3731 1.757699 ACGGAGGGAGTAGATTTCAGC 59.242 52.381 0.00 0.00 0.00 4.26
2656 3732 3.489398 CGAACGGAGGGAGTAGATTTCAG 60.489 52.174 0.00 0.00 0.00 3.02
2657 3733 2.426024 CGAACGGAGGGAGTAGATTTCA 59.574 50.000 0.00 0.00 0.00 2.69
2658 3734 2.223758 CCGAACGGAGGGAGTAGATTTC 60.224 54.545 7.53 0.00 37.50 2.17
2659 3735 1.755380 CCGAACGGAGGGAGTAGATTT 59.245 52.381 7.53 0.00 37.50 2.17
2660 3736 1.064166 TCCGAACGGAGGGAGTAGATT 60.064 52.381 12.04 0.00 39.76 2.40
2661 3737 0.549950 TCCGAACGGAGGGAGTAGAT 59.450 55.000 12.04 0.00 39.76 1.98
2662 3738 0.329261 TTCCGAACGGAGGGAGTAGA 59.671 55.000 15.34 0.00 46.06 2.59
2663 3739 0.455005 GTTCCGAACGGAGGGAGTAG 59.545 60.000 15.34 0.00 46.06 2.57
2664 3740 0.038744 AGTTCCGAACGGAGGGAGTA 59.961 55.000 15.34 0.00 46.06 2.59
2665 3741 0.038744 TAGTTCCGAACGGAGGGAGT 59.961 55.000 15.34 7.38 46.06 3.85
2666 3742 1.400737 ATAGTTCCGAACGGAGGGAG 58.599 55.000 15.34 0.00 46.06 4.30
2667 3743 1.753073 GAATAGTTCCGAACGGAGGGA 59.247 52.381 15.34 5.90 46.06 4.20
2668 3744 1.479323 TGAATAGTTCCGAACGGAGGG 59.521 52.381 15.34 0.00 46.06 4.30
2669 3745 2.953466 TGAATAGTTCCGAACGGAGG 57.047 50.000 15.34 0.00 46.06 4.30
2670 3746 5.121768 ACATTTTGAATAGTTCCGAACGGAG 59.878 40.000 15.34 2.98 46.06 4.63
2671 3747 4.998672 ACATTTTGAATAGTTCCGAACGGA 59.001 37.500 12.04 12.04 43.52 4.69
2672 3748 5.291293 ACATTTTGAATAGTTCCGAACGG 57.709 39.130 6.94 6.94 36.23 4.44
2673 3749 7.906160 AGATACATTTTGAATAGTTCCGAACG 58.094 34.615 5.62 0.00 36.23 3.95
2709 3785 9.952030 TCACAAAAATGGATGTATCTACAACTA 57.048 29.630 0.00 0.00 39.99 2.24
2710 3786 8.730680 GTCACAAAAATGGATGTATCTACAACT 58.269 33.333 0.00 0.00 39.99 3.16
2711 3787 8.511321 TGTCACAAAAATGGATGTATCTACAAC 58.489 33.333 0.00 0.00 39.99 3.32
2712 3788 8.628630 TGTCACAAAAATGGATGTATCTACAA 57.371 30.769 0.00 0.00 39.99 2.41
2713 3789 8.628630 TTGTCACAAAAATGGATGTATCTACA 57.371 30.769 0.00 0.00 40.98 2.74
2714 3790 8.730680 ACTTGTCACAAAAATGGATGTATCTAC 58.269 33.333 0.00 0.00 0.00 2.59
2715 3791 8.862325 ACTTGTCACAAAAATGGATGTATCTA 57.138 30.769 0.00 0.00 0.00 1.98
2716 3792 7.765695 ACTTGTCACAAAAATGGATGTATCT 57.234 32.000 0.00 0.00 0.00 1.98
2720 3796 9.260002 GAAATTACTTGTCACAAAAATGGATGT 57.740 29.630 0.00 0.00 0.00 3.06
2721 3797 8.427012 CGAAATTACTTGTCACAAAAATGGATG 58.573 33.333 0.00 0.00 0.00 3.51
2722 3798 8.356657 TCGAAATTACTTGTCACAAAAATGGAT 58.643 29.630 0.00 0.00 0.00 3.41
2723 3799 7.708051 TCGAAATTACTTGTCACAAAAATGGA 58.292 30.769 0.00 0.00 0.00 3.41
2724 3800 7.922505 TCGAAATTACTTGTCACAAAAATGG 57.077 32.000 0.00 0.00 0.00 3.16
2725 3801 8.802856 TGTTCGAAATTACTTGTCACAAAAATG 58.197 29.630 0.00 0.00 0.00 2.32
2726 3802 8.918961 TGTTCGAAATTACTTGTCACAAAAAT 57.081 26.923 0.00 0.00 0.00 1.82
2727 3803 8.237949 TCTGTTCGAAATTACTTGTCACAAAAA 58.762 29.630 0.00 0.00 0.00 1.94
2728 3804 7.753659 TCTGTTCGAAATTACTTGTCACAAAA 58.246 30.769 0.00 0.00 0.00 2.44
2729 3805 7.310072 TCTGTTCGAAATTACTTGTCACAAA 57.690 32.000 0.00 0.00 0.00 2.83
2730 3806 6.018262 CCTCTGTTCGAAATTACTTGTCACAA 60.018 38.462 0.00 0.00 0.00 3.33
2731 3807 5.465390 CCTCTGTTCGAAATTACTTGTCACA 59.535 40.000 0.00 0.00 0.00 3.58
2732 3808 5.694910 TCCTCTGTTCGAAATTACTTGTCAC 59.305 40.000 0.00 0.00 0.00 3.67
2733 3809 5.849510 TCCTCTGTTCGAAATTACTTGTCA 58.150 37.500 0.00 0.00 0.00 3.58
2734 3810 6.424207 ACTTCCTCTGTTCGAAATTACTTGTC 59.576 38.462 0.00 0.00 0.00 3.18
2735 3811 6.289064 ACTTCCTCTGTTCGAAATTACTTGT 58.711 36.000 0.00 0.00 0.00 3.16
2736 3812 6.787085 ACTTCCTCTGTTCGAAATTACTTG 57.213 37.500 0.00 0.00 0.00 3.16
2737 3813 6.872547 GGTACTTCCTCTGTTCGAAATTACTT 59.127 38.462 0.00 0.00 0.00 2.24
2738 3814 6.210984 AGGTACTTCCTCTGTTCGAAATTACT 59.789 38.462 0.00 0.00 44.42 2.24
2739 3815 6.396450 AGGTACTTCCTCTGTTCGAAATTAC 58.604 40.000 0.00 0.00 44.42 1.89
2740 3816 6.600882 AGGTACTTCCTCTGTTCGAAATTA 57.399 37.500 0.00 0.00 44.42 1.40
2741 3817 5.485209 AGGTACTTCCTCTGTTCGAAATT 57.515 39.130 0.00 0.00 44.42 1.82
2742 3818 5.479375 TGTAGGTACTTCCTCTGTTCGAAAT 59.521 40.000 0.00 0.00 44.42 2.17
2743 3819 4.828939 TGTAGGTACTTCCTCTGTTCGAAA 59.171 41.667 0.00 0.00 44.42 3.46
2744 3820 4.401022 TGTAGGTACTTCCTCTGTTCGAA 58.599 43.478 0.00 0.00 44.42 3.71
2745 3821 4.025040 TGTAGGTACTTCCTCTGTTCGA 57.975 45.455 0.00 0.00 44.42 3.71
2746 3822 4.778534 TTGTAGGTACTTCCTCTGTTCG 57.221 45.455 0.00 0.00 44.42 3.95
2747 3823 6.935208 ACATTTTGTAGGTACTTCCTCTGTTC 59.065 38.462 0.00 0.00 44.42 3.18
2748 3824 6.838382 ACATTTTGTAGGTACTTCCTCTGTT 58.162 36.000 0.00 0.00 44.42 3.16
2749 3825 6.435292 ACATTTTGTAGGTACTTCCTCTGT 57.565 37.500 0.00 0.00 44.42 3.41
2750 3826 7.745620 AAACATTTTGTAGGTACTTCCTCTG 57.254 36.000 0.00 0.00 44.42 3.35
2754 3830 9.634163 CCAATTAAACATTTTGTAGGTACTTCC 57.366 33.333 0.00 0.00 41.75 3.46
2757 3833 9.357161 TGACCAATTAAACATTTTGTAGGTACT 57.643 29.630 0.00 0.00 46.37 2.73
2758 3834 9.968870 TTGACCAATTAAACATTTTGTAGGTAC 57.031 29.630 0.00 0.00 0.00 3.34
2786 3862 2.197465 GGTCCTTCACCCTATTGACCT 58.803 52.381 0.00 0.00 39.69 3.85
2829 3905 2.548464 ATGCTTTTAAGGGGATGCCA 57.452 45.000 5.30 0.00 0.00 4.92
2831 3907 3.832527 TCCTATGCTTTTAAGGGGATGC 58.167 45.455 0.00 0.00 0.00 3.91
2941 4025 3.679389 AGGAATCAGCAAAGTTGATCGT 58.321 40.909 0.00 0.00 34.30 3.73
3024 4108 4.748701 ACTTCTTCCTAGGTGGTACTCAA 58.251 43.478 9.08 0.00 37.07 3.02
3204 4292 6.702716 TTTTCTGTCCTTCGGTTAACAAAT 57.297 33.333 8.10 0.00 0.00 2.32
3286 4375 0.248012 CATTGCTGCAATTCCTGGCA 59.752 50.000 24.28 0.00 38.52 4.92
3289 4378 0.248012 TGCCATTGCTGCAATTCCTG 59.752 50.000 24.28 14.90 38.71 3.86
3337 4426 2.827322 CCTGTTTTGGCCATTCAGATGA 59.173 45.455 24.39 0.07 35.16 2.92
3384 4473 7.885922 TCACAGCCTGTTTACTAAAATGGATTA 59.114 33.333 0.00 0.00 0.00 1.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.