Multiple sequence alignment - TraesCS2D01G535600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G535600 chr2D 100.000 3189 0 0 3280 6468 618335698 618338886 0.000000e+00 5890.0
1 TraesCS2D01G535600 chr2D 100.000 2920 0 0 1 2920 618332419 618335338 0.000000e+00 5393.0
2 TraesCS2D01G535600 chr2D 86.050 1319 153 20 1016 2317 586961677 586960373 0.000000e+00 1387.0
3 TraesCS2D01G535600 chr2D 85.464 1314 144 20 1016 2316 618143173 618141894 0.000000e+00 1325.0
4 TraesCS2D01G535600 chr2D 81.554 1274 169 40 1084 2315 586846896 586845647 0.000000e+00 990.0
5 TraesCS2D01G535600 chr2D 80.016 1256 210 30 1084 2315 618660280 618659042 0.000000e+00 891.0
6 TraesCS2D01G535600 chr2D 86.242 298 20 6 2544 2820 168964487 168964784 2.930000e-78 303.0
7 TraesCS2D01G535600 chr2D 83.704 270 41 2 2051 2317 618876992 618877261 1.080000e-62 252.0
8 TraesCS2D01G535600 chr2D 80.866 277 52 1 4488 4764 586958027 586957752 3.930000e-52 217.0
9 TraesCS2D01G535600 chr2D 88.406 138 5 2 2695 2822 32068054 32068190 8.680000e-34 156.0
10 TraesCS2D01G535600 chr2A 95.647 1608 47 6 4037 5641 749388057 749389644 0.000000e+00 2560.0
11 TraesCS2D01G535600 chr2A 95.315 1494 64 5 891 2380 749385031 749386522 0.000000e+00 2366.0
12 TraesCS2D01G535600 chr2A 85.444 1319 161 20 1016 2317 721729571 721728267 0.000000e+00 1343.0
13 TraesCS2D01G535600 chr2A 85.095 1315 148 22 1016 2317 748910492 748909213 0.000000e+00 1299.0
14 TraesCS2D01G535600 chr2A 93.005 629 27 7 3422 4038 749387357 749387980 0.000000e+00 902.0
15 TraesCS2D01G535600 chr2A 88.499 713 63 9 12 712 749384334 749385039 0.000000e+00 845.0
16 TraesCS2D01G535600 chr2A 93.075 361 15 7 5633 5993 749428181 749428531 2.670000e-143 520.0
17 TraesCS2D01G535600 chr2A 93.651 315 18 2 5991 6305 749428558 749428870 2.730000e-128 470.0
18 TraesCS2D01G535600 chr2A 83.648 318 51 1 4060 4376 748908272 748907955 1.360000e-76 298.0
19 TraesCS2D01G535600 chr2A 81.132 371 62 8 3670 4038 748908726 748908362 2.280000e-74 291.0
20 TraesCS2D01G535600 chr2A 81.579 342 55 7 4079 4415 748870434 748870096 6.390000e-70 276.0
21 TraesCS2D01G535600 chr2A 88.889 198 13 6 704 896 744890620 744890813 1.080000e-57 235.0
22 TraesCS2D01G535600 chr2A 79.710 276 55 1 4489 4764 721725898 721725624 1.420000e-46 198.0
23 TraesCS2D01G535600 chr2B 90.752 1849 134 17 4060 5887 755148508 755146676 0.000000e+00 2433.0
24 TraesCS2D01G535600 chr2B 93.602 1516 75 5 891 2401 755150912 755149414 0.000000e+00 2242.0
25 TraesCS2D01G535600 chr2B 87.433 1679 155 17 4354 5992 755032130 755033792 0.000000e+00 1881.0
26 TraesCS2D01G535600 chr2B 85.272 1324 163 15 1016 2317 708716298 708714985 0.000000e+00 1336.0
27 TraesCS2D01G535600 chr2B 84.954 1316 149 24 1016 2317 754654611 754653331 0.000000e+00 1288.0
28 TraesCS2D01G535600 chr2B 89.246 716 47 12 4 712 755151596 755150904 0.000000e+00 869.0
29 TraesCS2D01G535600 chr2B 92.487 599 38 6 1731 2329 755009815 755010406 0.000000e+00 850.0
30 TraesCS2D01G535600 chr2B 89.543 679 35 15 3370 4038 755149251 755148599 0.000000e+00 828.0
31 TraesCS2D01G535600 chr2B 94.805 231 7 3 3811 4038 755010403 755010631 7.980000e-94 355.0
32 TraesCS2D01G535600 chr2B 91.770 243 14 2 4037 4277 755010707 755010945 3.740000e-87 333.0
33 TraesCS2D01G535600 chr2B 82.143 364 47 10 2472 2821 2942185 2941826 4.900000e-76 296.0
34 TraesCS2D01G535600 chr2B 82.736 307 52 1 4060 4365 754652419 754652113 8.260000e-69 272.0
35 TraesCS2D01G535600 chr2B 83.217 286 28 10 2558 2829 16910509 16910788 1.800000e-60 244.0
36 TraesCS2D01G535600 chr2B 83.333 276 27 7 2558 2821 16935343 16935611 3.010000e-58 237.0
37 TraesCS2D01G535600 chr2B 80.000 275 52 2 4490 4764 708710796 708710525 3.960000e-47 200.0
38 TraesCS2D01G535600 chr2B 88.406 138 13 3 6089 6223 755063619 755063482 5.190000e-36 163.0
39 TraesCS2D01G535600 chr2B 94.805 77 4 0 6229 6305 755145950 755145874 3.170000e-23 121.0
40 TraesCS2D01G535600 chr2B 91.667 84 7 0 6225 6308 755063407 755063324 4.100000e-22 117.0
41 TraesCS2D01G535600 chr2B 91.379 58 5 0 2414 2471 755149337 755149280 5.380000e-11 80.5
42 TraesCS2D01G535600 chr7B 84.270 356 38 12 2471 2820 4094645 4094302 1.340000e-86 331.0
43 TraesCS2D01G535600 chr7B 83.288 371 40 12 2469 2823 215003440 215003076 8.090000e-84 322.0
44 TraesCS2D01G535600 chr7B 86.232 276 32 3 2471 2740 664400125 664400400 1.760000e-75 294.0
45 TraesCS2D01G535600 chr7B 91.803 183 12 3 709 891 676406429 676406608 1.080000e-62 252.0
46 TraesCS2D01G535600 chr7B 86.408 206 24 3 693 895 648160303 648160507 8.440000e-54 222.0
47 TraesCS2D01G535600 chr7B 81.529 157 26 3 164 319 103884700 103884854 6.810000e-25 126.0
48 TraesCS2D01G535600 chr7B 80.503 159 17 11 162 316 377605136 377605284 6.860000e-20 110.0
49 TraesCS2D01G535600 chr3B 82.609 368 44 10 2470 2820 19993831 19994195 2.270000e-79 307.0
50 TraesCS2D01G535600 chr5D 87.687 268 18 8 2565 2820 449053840 449053576 1.360000e-76 298.0
51 TraesCS2D01G535600 chr1B 86.716 271 30 5 2472 2740 62420228 62419962 4.900000e-76 296.0
52 TraesCS2D01G535600 chr1B 82.394 284 33 8 2472 2740 539574163 539573882 1.400000e-56 231.0
53 TraesCS2D01G535600 chr3A 84.936 312 21 10 2544 2833 737966665 737966358 6.340000e-75 292.0
54 TraesCS2D01G535600 chr3A 84.848 297 24 9 2544 2820 748360062 748359767 4.940000e-71 279.0
55 TraesCS2D01G535600 chr3A 79.634 383 51 14 2466 2821 44322777 44322395 3.870000e-62 250.0
56 TraesCS2D01G535600 chr1D 85.017 287 26 7 2544 2817 426388726 426388444 6.390000e-70 276.0
57 TraesCS2D01G535600 chr3D 88.372 215 19 4 2544 2752 26164194 26163980 2.990000e-63 254.0
58 TraesCS2D01G535600 chr3D 90.909 187 13 4 710 894 137020843 137021027 1.390000e-61 248.0
59 TraesCS2D01G535600 chr3D 79.250 400 30 19 2473 2825 592572094 592572487 5.040000e-56 230.0
60 TraesCS2D01G535600 chr3D 87.817 197 19 4 706 899 475555028 475555222 6.530000e-55 226.0
61 TraesCS2D01G535600 chrUn 79.896 383 45 14 2471 2822 33184571 33184952 1.080000e-62 252.0
62 TraesCS2D01G535600 chr4D 91.011 178 10 5 715 890 70335871 70335698 1.080000e-57 235.0
63 TraesCS2D01G535600 chr5B 79.938 324 56 6 12 334 334878882 334879197 5.040000e-56 230.0
64 TraesCS2D01G535600 chr4A 89.888 178 16 2 715 891 36611273 36611449 1.810000e-55 228.0
65 TraesCS2D01G535600 chr4A 74.476 286 58 10 45 319 548299356 548299637 6.860000e-20 110.0
66 TraesCS2D01G535600 chr1A 89.560 182 16 3 711 890 71725814 71725634 1.810000e-55 228.0
67 TraesCS2D01G535600 chr1A 81.395 172 27 2 164 335 42222183 42222017 1.130000e-27 135.0
68 TraesCS2D01G535600 chr6D 87.692 195 18 5 706 895 31964638 31964831 8.440000e-54 222.0
69 TraesCS2D01G535600 chr7D 77.570 321 65 6 15 334 100237237 100236923 3.080000e-43 187.0
70 TraesCS2D01G535600 chr5A 77.982 218 36 8 107 319 503133783 503133993 6.810000e-25 126.0
71 TraesCS2D01G535600 chr7A 90.426 94 8 1 6363 6456 84787219 84787127 8.810000e-24 122.0
72 TraesCS2D01G535600 chr7A 97.143 35 1 0 6370 6404 37749390 37749424 7.000000e-05 60.2
73 TraesCS2D01G535600 chr6B 87.500 96 11 1 3280 3374 707816359 707816454 6.860000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G535600 chr2D 618332419 618338886 6467 False 5641.500000 5890 100.000000 1 6468 2 chr2D.!!$F4 6467
1 TraesCS2D01G535600 chr2D 618141894 618143173 1279 True 1325.000000 1325 85.464000 1016 2316 1 chr2D.!!$R2 1300
2 TraesCS2D01G535600 chr2D 586845647 586846896 1249 True 990.000000 990 81.554000 1084 2315 1 chr2D.!!$R1 1231
3 TraesCS2D01G535600 chr2D 618659042 618660280 1238 True 891.000000 891 80.016000 1084 2315 1 chr2D.!!$R3 1231
4 TraesCS2D01G535600 chr2D 586957752 586961677 3925 True 802.000000 1387 83.458000 1016 4764 2 chr2D.!!$R4 3748
5 TraesCS2D01G535600 chr2A 749384334 749389644 5310 False 1668.250000 2560 93.116500 12 5641 4 chr2A.!!$F2 5629
6 TraesCS2D01G535600 chr2A 721725624 721729571 3947 True 770.500000 1343 82.577000 1016 4764 2 chr2A.!!$R2 3748
7 TraesCS2D01G535600 chr2A 748907955 748910492 2537 True 629.333333 1299 83.291667 1016 4376 3 chr2A.!!$R3 3360
8 TraesCS2D01G535600 chr2A 749428181 749428870 689 False 495.000000 520 93.363000 5633 6305 2 chr2A.!!$F3 672
9 TraesCS2D01G535600 chr2B 755032130 755033792 1662 False 1881.000000 1881 87.433000 4354 5992 1 chr2B.!!$F3 1638
10 TraesCS2D01G535600 chr2B 708714985 708716298 1313 True 1336.000000 1336 85.272000 1016 2317 1 chr2B.!!$R3 1301
11 TraesCS2D01G535600 chr2B 755145874 755151596 5722 True 1095.583333 2433 91.554500 4 6305 6 chr2B.!!$R6 6301
12 TraesCS2D01G535600 chr2B 754652113 754654611 2498 True 780.000000 1288 83.845000 1016 4365 2 chr2B.!!$R4 3349
13 TraesCS2D01G535600 chr2B 755009815 755010945 1130 False 512.666667 850 93.020667 1731 4277 3 chr2B.!!$F4 2546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
672 692 0.041238 ACTACAGTGCTCCTGCCCTA 59.959 55.0 4.17 0.00 45.68 3.53 F
1176 1212 0.899019 GCTTCTTCTCTCCCGGAGTT 59.101 55.0 14.36 0.00 42.40 3.01 F
2794 3634 0.107165 GTTCATGAGGGTGTAGGGGC 60.107 60.0 0.00 0.00 0.00 5.80 F
2916 3762 0.106519 AGTTATGGGCTGATGGTGGC 60.107 55.0 0.00 0.00 0.00 5.01 F
3310 4156 0.175989 GAAGAGGTTAGCGTGGGGAG 59.824 60.0 0.00 0.00 0.00 4.30 F
3340 4186 0.179100 TCCGTACGAGGAGTCCGTAG 60.179 60.0 18.76 1.68 42.24 3.51 F
3345 4191 0.540923 ACGAGGAGTCCGTAGCTAGT 59.459 55.0 2.76 0.00 38.61 2.57 F
5293 7580 1.118965 TCTGCGTCCAGGAAACTCCA 61.119 55.0 0.00 0.00 39.61 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2601 3441 0.182775 AGGGCTCCTCAAACGTTGTT 59.817 50.000 0.00 0.0 0.00 2.83 R
2897 3743 0.106519 GCCACCATCAGCCCATAACT 60.107 55.000 0.00 0.0 0.00 2.24 R
4255 5942 1.355043 AGGAGACGGACAAGACTACCT 59.645 52.381 0.00 0.0 0.00 3.08 R
4343 6030 2.070783 GCGAGTACCGAAAATGTGGAA 58.929 47.619 7.77 0.0 41.76 3.53 R
5074 7357 0.512518 TGTTCACGCTTGATGCTTCG 59.487 50.000 0.00 0.0 40.11 3.79 R
5293 7580 0.976641 ACATGGTCGGTCTGTCACAT 59.023 50.000 0.00 0.0 0.00 3.21 R
5302 7589 1.911766 AACGGAGGACATGGTCGGT 60.912 57.895 0.00 0.0 32.65 4.69 R
6447 9162 0.104120 AAACAAGGACAAAAGCGCCC 59.896 50.000 2.29 0.0 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 2.028658 TGCATCTGTTTTCTCTCTCGCT 60.029 45.455 0.00 0.00 0.00 4.93
153 165 0.109723 TCCCACACCGCTTTTAGCTT 59.890 50.000 0.00 0.00 39.60 3.74
155 167 1.523758 CCACACCGCTTTTAGCTTCT 58.476 50.000 0.00 0.00 39.60 2.85
157 169 2.095718 CCACACCGCTTTTAGCTTCTTC 60.096 50.000 0.00 0.00 39.60 2.87
190 202 2.042843 TCCTCCTCTTCCTCCGCC 60.043 66.667 0.00 0.00 0.00 6.13
201 213 0.263765 TCCTCCGCCTAGGTACCATT 59.736 55.000 15.94 0.00 41.99 3.16
249 261 2.765699 ACAAGTGTTTGGTGAAATGCCT 59.234 40.909 0.00 0.00 38.66 4.75
336 355 4.025396 GCACTACATTGATTCATCCGACAG 60.025 45.833 0.00 0.00 0.00 3.51
337 356 4.509230 CACTACATTGATTCATCCGACAGG 59.491 45.833 0.00 0.00 39.46 4.00
366 385 6.488344 TGACATGTGGTTATTTAGAGTTTGCA 59.512 34.615 1.15 0.00 0.00 4.08
502 521 5.380043 CCCTTAACATCACCTTGCATCTAT 58.620 41.667 0.00 0.00 0.00 1.98
540 560 2.160417 CGAAGATTGCAACTTCCTGGAC 59.840 50.000 23.86 9.35 40.11 4.02
560 580 4.518970 GGACATTTTTGGCTACTCTTGACA 59.481 41.667 0.00 0.00 0.00 3.58
569 589 0.966179 TACTCTTGACAGCGAAGGCA 59.034 50.000 0.00 0.00 43.41 4.75
575 595 4.280494 ACAGCGAAGGCACGACGT 62.280 61.111 8.16 0.00 43.41 4.34
672 692 0.041238 ACTACAGTGCTCCTGCCCTA 59.959 55.000 4.17 0.00 45.68 3.53
681 701 1.808133 GCTCCTGCCCTAATCTTGACG 60.808 57.143 0.00 0.00 0.00 4.35
686 706 3.190874 CTGCCCTAATCTTGACGAGTTC 58.809 50.000 0.00 0.00 0.00 3.01
721 742 9.566432 AAAGAAGTTATTTCAATGAGTCTGTCT 57.434 29.630 0.00 0.00 38.31 3.41
723 744 9.868277 AGAAGTTATTTCAATGAGTCTGTCTAG 57.132 33.333 0.00 0.00 38.31 2.43
724 745 9.092876 GAAGTTATTTCAATGAGTCTGTCTAGG 57.907 37.037 0.00 0.00 35.78 3.02
725 746 8.367660 AGTTATTTCAATGAGTCTGTCTAGGA 57.632 34.615 0.00 0.00 0.00 2.94
726 747 8.254508 AGTTATTTCAATGAGTCTGTCTAGGAC 58.745 37.037 0.00 0.00 0.00 3.85
727 748 6.611613 ATTTCAATGAGTCTGTCTAGGACA 57.388 37.500 0.43 0.43 40.50 4.02
728 749 5.392767 TTCAATGAGTCTGTCTAGGACAC 57.607 43.478 0.00 0.00 37.67 3.67
729 750 4.407365 TCAATGAGTCTGTCTAGGACACA 58.593 43.478 0.00 1.53 37.67 3.72
730 751 5.019470 TCAATGAGTCTGTCTAGGACACAT 58.981 41.667 5.24 5.24 43.17 3.21
731 752 5.126222 TCAATGAGTCTGTCTAGGACACATC 59.874 44.000 9.67 0.00 41.53 3.06
732 753 4.308526 TGAGTCTGTCTAGGACACATCT 57.691 45.455 0.00 0.00 37.67 2.90
733 754 5.437191 TGAGTCTGTCTAGGACACATCTA 57.563 43.478 0.00 0.00 37.67 1.98
734 755 5.432645 TGAGTCTGTCTAGGACACATCTAG 58.567 45.833 0.00 0.00 37.67 2.43
735 756 5.189934 TGAGTCTGTCTAGGACACATCTAGA 59.810 44.000 0.00 0.00 37.67 2.43
736 757 6.126623 TGAGTCTGTCTAGGACACATCTAGAT 60.127 42.308 0.00 0.00 43.25 1.98
737 758 6.061441 AGTCTGTCTAGGACACATCTAGATG 58.939 44.000 27.63 27.63 43.25 2.90
781 802 9.254133 CATCTAACCTGATGTCTACTATGTTTG 57.746 37.037 0.00 0.00 39.05 2.93
782 803 8.362464 TCTAACCTGATGTCTACTATGTTTGT 57.638 34.615 0.00 0.00 0.00 2.83
783 804 8.251026 TCTAACCTGATGTCTACTATGTTTGTG 58.749 37.037 0.00 0.00 0.00 3.33
784 805 5.734720 ACCTGATGTCTACTATGTTTGTGG 58.265 41.667 0.00 0.00 0.00 4.17
785 806 5.248477 ACCTGATGTCTACTATGTTTGTGGT 59.752 40.000 0.00 0.00 0.00 4.16
786 807 6.173339 CCTGATGTCTACTATGTTTGTGGTT 58.827 40.000 0.00 0.00 0.00 3.67
787 808 6.655003 CCTGATGTCTACTATGTTTGTGGTTT 59.345 38.462 0.00 0.00 0.00 3.27
788 809 7.822334 CCTGATGTCTACTATGTTTGTGGTTTA 59.178 37.037 0.00 0.00 0.00 2.01
789 810 9.383519 CTGATGTCTACTATGTTTGTGGTTTAT 57.616 33.333 0.00 0.00 0.00 1.40
790 811 9.733556 TGATGTCTACTATGTTTGTGGTTTATT 57.266 29.630 0.00 0.00 0.00 1.40
827 848 4.608948 TTTTTGTTCCTGGTTGTTGTGT 57.391 36.364 0.00 0.00 0.00 3.72
828 849 4.608948 TTTTGTTCCTGGTTGTTGTGTT 57.391 36.364 0.00 0.00 0.00 3.32
829 850 5.723672 TTTTGTTCCTGGTTGTTGTGTTA 57.276 34.783 0.00 0.00 0.00 2.41
830 851 5.923733 TTTGTTCCTGGTTGTTGTGTTAT 57.076 34.783 0.00 0.00 0.00 1.89
831 852 5.923733 TTGTTCCTGGTTGTTGTGTTATT 57.076 34.783 0.00 0.00 0.00 1.40
832 853 5.923733 TGTTCCTGGTTGTTGTGTTATTT 57.076 34.783 0.00 0.00 0.00 1.40
833 854 5.655488 TGTTCCTGGTTGTTGTGTTATTTG 58.345 37.500 0.00 0.00 0.00 2.32
834 855 5.186021 TGTTCCTGGTTGTTGTGTTATTTGT 59.814 36.000 0.00 0.00 0.00 2.83
835 856 6.377429 TGTTCCTGGTTGTTGTGTTATTTGTA 59.623 34.615 0.00 0.00 0.00 2.41
836 857 6.627395 TCCTGGTTGTTGTGTTATTTGTAG 57.373 37.500 0.00 0.00 0.00 2.74
837 858 6.358178 TCCTGGTTGTTGTGTTATTTGTAGA 58.642 36.000 0.00 0.00 0.00 2.59
838 859 6.829298 TCCTGGTTGTTGTGTTATTTGTAGAA 59.171 34.615 0.00 0.00 0.00 2.10
839 860 7.012894 TCCTGGTTGTTGTGTTATTTGTAGAAG 59.987 37.037 0.00 0.00 0.00 2.85
840 861 6.500041 TGGTTGTTGTGTTATTTGTAGAAGC 58.500 36.000 0.00 0.00 0.00 3.86
841 862 6.320164 TGGTTGTTGTGTTATTTGTAGAAGCT 59.680 34.615 0.00 0.00 0.00 3.74
842 863 7.147983 TGGTTGTTGTGTTATTTGTAGAAGCTT 60.148 33.333 0.00 0.00 0.00 3.74
843 864 8.347035 GGTTGTTGTGTTATTTGTAGAAGCTTA 58.653 33.333 0.00 0.00 0.00 3.09
844 865 9.382244 GTTGTTGTGTTATTTGTAGAAGCTTAG 57.618 33.333 0.00 0.00 0.00 2.18
845 866 8.896320 TGTTGTGTTATTTGTAGAAGCTTAGA 57.104 30.769 0.00 0.00 0.00 2.10
846 867 9.502091 TGTTGTGTTATTTGTAGAAGCTTAGAT 57.498 29.630 0.00 0.00 0.00 1.98
847 868 9.760660 GTTGTGTTATTTGTAGAAGCTTAGATG 57.239 33.333 0.00 0.00 0.00 2.90
848 869 9.502091 TTGTGTTATTTGTAGAAGCTTAGATGT 57.498 29.630 0.00 0.00 0.00 3.06
849 870 8.935844 TGTGTTATTTGTAGAAGCTTAGATGTG 58.064 33.333 0.00 0.00 0.00 3.21
850 871 9.151471 GTGTTATTTGTAGAAGCTTAGATGTGA 57.849 33.333 0.00 0.00 0.00 3.58
851 872 9.151471 TGTTATTTGTAGAAGCTTAGATGTGAC 57.849 33.333 0.00 0.00 0.00 3.67
852 873 9.151471 GTTATTTGTAGAAGCTTAGATGTGACA 57.849 33.333 0.00 0.00 0.00 3.58
853 874 9.890629 TTATTTGTAGAAGCTTAGATGTGACAT 57.109 29.630 0.00 0.00 0.00 3.06
854 875 7.834068 TTTGTAGAAGCTTAGATGTGACATC 57.166 36.000 17.46 17.46 0.00 3.06
855 876 5.907207 TGTAGAAGCTTAGATGTGACATCC 58.093 41.667 21.05 6.69 0.00 3.51
856 877 5.658634 TGTAGAAGCTTAGATGTGACATCCT 59.341 40.000 21.05 11.75 0.00 3.24
857 878 5.690464 AGAAGCTTAGATGTGACATCCTT 57.310 39.130 21.05 16.28 0.00 3.36
858 879 6.798427 AGAAGCTTAGATGTGACATCCTTA 57.202 37.500 21.05 6.22 0.00 2.69
859 880 7.187824 AGAAGCTTAGATGTGACATCCTTAA 57.812 36.000 21.05 13.11 0.00 1.85
860 881 7.624549 AGAAGCTTAGATGTGACATCCTTAAA 58.375 34.615 21.05 10.18 0.00 1.52
861 882 8.103305 AGAAGCTTAGATGTGACATCCTTAAAA 58.897 33.333 21.05 8.00 0.00 1.52
862 883 8.635765 AAGCTTAGATGTGACATCCTTAAAAA 57.364 30.769 21.05 6.46 0.00 1.94
1119 1149 2.261671 CAGAACCTCACCGACGGG 59.738 66.667 20.00 7.45 40.11 5.28
1173 1209 2.052690 CGGCTTCTTCTCTCCCGGA 61.053 63.158 0.73 0.00 35.54 5.14
1175 1211 0.973496 GGCTTCTTCTCTCCCGGAGT 60.973 60.000 14.36 0.00 42.40 3.85
1176 1212 0.899019 GCTTCTTCTCTCCCGGAGTT 59.101 55.000 14.36 0.00 42.40 3.01
1182 1224 1.215647 CTCTCCCGGAGTTTCCACG 59.784 63.158 14.36 0.00 35.91 4.94
1198 1240 2.404995 ACGAAGAGGTACCTCGGCG 61.405 63.158 36.30 36.30 46.90 6.46
1226 1271 2.668212 CGTGTCCAACGCCACCAT 60.668 61.111 0.00 0.00 46.99 3.55
1229 1274 3.799755 GTCCAACGCCACCATCGC 61.800 66.667 0.00 0.00 0.00 4.58
1305 1351 3.626924 AACGACCTCGGCAGCCTT 61.627 61.111 10.54 0.00 44.95 4.35
1427 1485 3.425713 CAATGGCAGCAGCGACGT 61.426 61.111 0.00 0.00 43.41 4.34
1443 1501 1.296392 CGTCTCCCTGTGGCAATCA 59.704 57.895 0.00 0.00 0.00 2.57
1960 2041 1.807573 GTCGAGGGCTTCAGCTTCG 60.808 63.158 15.54 15.54 43.70 3.79
2384 3160 7.964604 AAGTTAACTGACTGGATTTACTCAC 57.035 36.000 9.34 0.00 0.00 3.51
2471 3311 5.303747 ACTCACTCAACTGATCGACTTAG 57.696 43.478 0.00 0.00 0.00 2.18
2472 3312 5.004448 ACTCACTCAACTGATCGACTTAGA 58.996 41.667 0.00 0.00 0.00 2.10
2473 3313 5.123186 ACTCACTCAACTGATCGACTTAGAG 59.877 44.000 0.00 0.00 0.00 2.43
2474 3314 5.246307 TCACTCAACTGATCGACTTAGAGA 58.754 41.667 7.99 0.00 0.00 3.10
2475 3315 5.122554 TCACTCAACTGATCGACTTAGAGAC 59.877 44.000 7.99 0.00 0.00 3.36
2476 3316 5.004448 ACTCAACTGATCGACTTAGAGACA 58.996 41.667 7.99 0.00 0.00 3.41
2477 3317 5.123186 ACTCAACTGATCGACTTAGAGACAG 59.877 44.000 7.99 0.00 35.87 3.51
2478 3318 5.246307 TCAACTGATCGACTTAGAGACAGA 58.754 41.667 0.00 0.00 34.77 3.41
2479 3319 5.705905 TCAACTGATCGACTTAGAGACAGAA 59.294 40.000 0.00 0.00 34.77 3.02
2480 3320 6.375736 TCAACTGATCGACTTAGAGACAGAAT 59.624 38.462 0.00 0.00 34.77 2.40
2481 3321 6.767524 ACTGATCGACTTAGAGACAGAATT 57.232 37.500 0.00 0.00 34.77 2.17
2482 3322 6.791303 ACTGATCGACTTAGAGACAGAATTC 58.209 40.000 0.00 0.00 34.77 2.17
2483 3323 6.601613 ACTGATCGACTTAGAGACAGAATTCT 59.398 38.462 0.88 0.88 34.77 2.40
2484 3324 7.022055 TGATCGACTTAGAGACAGAATTCTC 57.978 40.000 4.57 0.00 42.22 2.87
2485 3325 6.599638 TGATCGACTTAGAGACAGAATTCTCA 59.400 38.462 4.57 0.00 44.05 3.27
2486 3326 6.429791 TCGACTTAGAGACAGAATTCTCAG 57.570 41.667 4.57 0.00 44.05 3.35
2487 3327 5.034152 CGACTTAGAGACAGAATTCTCAGC 58.966 45.833 4.57 0.00 44.05 4.26
2488 3328 5.392487 CGACTTAGAGACAGAATTCTCAGCA 60.392 44.000 4.57 0.00 44.05 4.41
2489 3329 5.719173 ACTTAGAGACAGAATTCTCAGCAC 58.281 41.667 4.57 0.00 44.05 4.40
2490 3330 3.608316 AGAGACAGAATTCTCAGCACC 57.392 47.619 4.57 0.00 44.05 5.01
2491 3331 2.235898 AGAGACAGAATTCTCAGCACCC 59.764 50.000 4.57 0.00 44.05 4.61
2492 3332 1.066573 AGACAGAATTCTCAGCACCCG 60.067 52.381 4.57 0.00 0.00 5.28
2493 3333 0.976641 ACAGAATTCTCAGCACCCGA 59.023 50.000 4.57 0.00 0.00 5.14
2494 3334 1.066573 ACAGAATTCTCAGCACCCGAG 60.067 52.381 4.57 0.00 0.00 4.63
2495 3335 1.066573 CAGAATTCTCAGCACCCGAGT 60.067 52.381 4.57 0.00 0.00 4.18
2504 3344 3.000819 CACCCGAGTGCCCCTACA 61.001 66.667 0.00 0.00 37.14 2.74
2505 3345 3.001406 ACCCGAGTGCCCCTACAC 61.001 66.667 0.00 0.00 41.02 2.90
2506 3346 3.782443 CCCGAGTGCCCCTACACC 61.782 72.222 0.00 0.00 41.67 4.16
2507 3347 3.782443 CCGAGTGCCCCTACACCC 61.782 72.222 0.00 0.00 41.67 4.61
2508 3348 2.683933 CGAGTGCCCCTACACCCT 60.684 66.667 0.00 0.00 41.67 4.34
2509 3349 2.722201 CGAGTGCCCCTACACCCTC 61.722 68.421 0.00 0.00 41.67 4.30
2510 3350 1.306226 GAGTGCCCCTACACCCTCT 60.306 63.158 0.00 0.00 41.67 3.69
2511 3351 1.613630 AGTGCCCCTACACCCTCTG 60.614 63.158 0.00 0.00 41.67 3.35
2512 3352 1.918800 GTGCCCCTACACCCTCTGT 60.919 63.158 0.00 0.00 34.35 3.41
2527 3367 6.435292 ACCCTCTGTGAACAGTAAGTTATT 57.565 37.500 10.14 0.00 44.12 1.40
2528 3368 6.838382 ACCCTCTGTGAACAGTAAGTTATTT 58.162 36.000 10.14 0.00 44.12 1.40
2529 3369 7.287810 ACCCTCTGTGAACAGTAAGTTATTTT 58.712 34.615 10.14 0.00 44.12 1.82
2530 3370 7.778382 ACCCTCTGTGAACAGTAAGTTATTTTT 59.222 33.333 10.14 0.00 44.12 1.94
2554 3394 2.818751 AAGTCCACAACTTTGGGACA 57.181 45.000 21.72 0.00 46.26 4.02
2555 3395 3.312736 AAGTCCACAACTTTGGGACAT 57.687 42.857 21.72 13.17 46.26 3.06
2556 3396 2.863809 AGTCCACAACTTTGGGACATC 58.136 47.619 21.72 5.53 44.23 3.06
2557 3397 2.174639 AGTCCACAACTTTGGGACATCA 59.825 45.455 21.72 0.00 44.23 3.07
2558 3398 2.955660 GTCCACAACTTTGGGACATCAA 59.044 45.455 17.79 0.00 42.77 2.57
2559 3399 3.383185 GTCCACAACTTTGGGACATCAAA 59.617 43.478 17.79 0.00 42.77 2.69
2560 3400 3.383185 TCCACAACTTTGGGACATCAAAC 59.617 43.478 0.00 0.00 39.30 2.93
2561 3401 3.131933 CCACAACTTTGGGACATCAAACA 59.868 43.478 0.00 0.00 39.30 2.83
2562 3402 4.202243 CCACAACTTTGGGACATCAAACAT 60.202 41.667 0.00 0.00 39.30 2.71
2563 3403 4.746115 CACAACTTTGGGACATCAAACATG 59.254 41.667 0.00 0.00 39.30 3.21
2564 3404 4.648762 ACAACTTTGGGACATCAAACATGA 59.351 37.500 0.00 0.00 39.30 3.07
2565 3405 5.305128 ACAACTTTGGGACATCAAACATGAT 59.695 36.000 0.00 0.00 39.30 2.45
2566 3406 5.649782 ACTTTGGGACATCAAACATGATC 57.350 39.130 0.00 0.00 39.30 2.92
2567 3407 5.078949 ACTTTGGGACATCAAACATGATCA 58.921 37.500 0.00 0.00 39.30 2.92
2568 3408 5.539574 ACTTTGGGACATCAAACATGATCAA 59.460 36.000 0.00 0.00 39.30 2.57
2569 3409 6.041865 ACTTTGGGACATCAAACATGATCAAA 59.958 34.615 0.00 0.00 39.30 2.69
2570 3410 5.389859 TGGGACATCAAACATGATCAAAC 57.610 39.130 0.00 0.00 0.00 2.93
2571 3411 5.078949 TGGGACATCAAACATGATCAAACT 58.921 37.500 0.00 0.00 0.00 2.66
2572 3412 5.539574 TGGGACATCAAACATGATCAAACTT 59.460 36.000 0.00 0.00 0.00 2.66
2573 3413 6.041865 TGGGACATCAAACATGATCAAACTTT 59.958 34.615 0.00 0.00 0.00 2.66
2574 3414 6.930722 GGGACATCAAACATGATCAAACTTTT 59.069 34.615 0.00 0.00 0.00 2.27
2575 3415 7.095523 GGGACATCAAACATGATCAAACTTTTG 60.096 37.037 0.00 7.34 39.48 2.44
2586 3426 4.998671 TCAAACTTTTGATGACCTTGCA 57.001 36.364 0.07 0.00 41.88 4.08
2587 3427 5.336150 TCAAACTTTTGATGACCTTGCAA 57.664 34.783 0.00 0.00 41.88 4.08
2588 3428 5.728471 TCAAACTTTTGATGACCTTGCAAA 58.272 33.333 0.00 0.00 41.88 3.68
2589 3429 5.811613 TCAAACTTTTGATGACCTTGCAAAG 59.188 36.000 0.00 0.00 41.88 2.77
2590 3430 5.343307 AACTTTTGATGACCTTGCAAAGT 57.657 34.783 0.00 0.00 44.25 2.66
2591 3431 5.343307 ACTTTTGATGACCTTGCAAAGTT 57.657 34.783 1.46 0.00 44.25 2.66
2592 3432 5.733676 ACTTTTGATGACCTTGCAAAGTTT 58.266 33.333 1.46 0.00 44.25 2.66
2593 3433 6.172630 ACTTTTGATGACCTTGCAAAGTTTT 58.827 32.000 1.46 0.00 44.25 2.43
2594 3434 7.327214 ACTTTTGATGACCTTGCAAAGTTTTA 58.673 30.769 1.46 0.00 44.25 1.52
2595 3435 7.492344 ACTTTTGATGACCTTGCAAAGTTTTAG 59.508 33.333 1.46 0.00 44.25 1.85
2596 3436 4.870363 TGATGACCTTGCAAAGTTTTAGC 58.130 39.130 1.46 0.00 44.25 3.09
2597 3437 4.584325 TGATGACCTTGCAAAGTTTTAGCT 59.416 37.500 1.46 0.00 44.25 3.32
2598 3438 5.767665 TGATGACCTTGCAAAGTTTTAGCTA 59.232 36.000 1.46 0.00 44.25 3.32
2599 3439 6.264292 TGATGACCTTGCAAAGTTTTAGCTAA 59.736 34.615 0.86 0.86 44.25 3.09
2600 3440 6.458232 TGACCTTGCAAAGTTTTAGCTAAA 57.542 33.333 14.96 14.96 44.25 1.85
2601 3441 6.868622 TGACCTTGCAAAGTTTTAGCTAAAA 58.131 32.000 24.42 24.42 44.25 1.52
2602 3442 7.324178 TGACCTTGCAAAGTTTTAGCTAAAAA 58.676 30.769 28.54 12.79 44.25 1.94
2614 3454 7.743520 TTTTAGCTAAAAACAACGTTTGAGG 57.256 32.000 25.65 0.00 32.05 3.86
2615 3455 6.680874 TTAGCTAAAAACAACGTTTGAGGA 57.319 33.333 2.97 0.00 0.00 3.71
2616 3456 5.169836 AGCTAAAAACAACGTTTGAGGAG 57.830 39.130 0.00 0.00 0.00 3.69
2617 3457 3.729217 GCTAAAAACAACGTTTGAGGAGC 59.271 43.478 0.00 0.00 0.00 4.70
2618 3458 2.863401 AAAACAACGTTTGAGGAGCC 57.137 45.000 0.00 0.00 0.00 4.70
2619 3459 1.029681 AAACAACGTTTGAGGAGCCC 58.970 50.000 0.00 0.00 0.00 5.19
2620 3460 0.182775 AACAACGTTTGAGGAGCCCT 59.817 50.000 0.00 0.00 36.03 5.19
2694 3534 3.790691 TTTTTGTGAGGCTCCACGA 57.209 47.368 12.86 7.43 39.80 4.35
2695 3535 2.045561 TTTTTGTGAGGCTCCACGAA 57.954 45.000 12.86 12.78 39.80 3.85
2696 3536 1.593196 TTTTGTGAGGCTCCACGAAG 58.407 50.000 12.86 0.00 40.40 3.79
2697 3537 0.756294 TTTGTGAGGCTCCACGAAGA 59.244 50.000 12.86 0.00 39.80 2.87
2698 3538 0.976641 TTGTGAGGCTCCACGAAGAT 59.023 50.000 12.86 0.00 39.80 2.40
2699 3539 0.976641 TGTGAGGCTCCACGAAGATT 59.023 50.000 12.86 0.00 39.80 2.40
2700 3540 2.176045 TGTGAGGCTCCACGAAGATTA 58.824 47.619 12.86 0.00 39.80 1.75
2701 3541 2.766263 TGTGAGGCTCCACGAAGATTAT 59.234 45.455 12.86 0.00 39.80 1.28
2702 3542 3.197766 TGTGAGGCTCCACGAAGATTATT 59.802 43.478 12.86 0.00 39.80 1.40
2703 3543 4.192317 GTGAGGCTCCACGAAGATTATTT 58.808 43.478 12.86 0.00 0.00 1.40
2704 3544 4.636206 GTGAGGCTCCACGAAGATTATTTT 59.364 41.667 12.86 0.00 0.00 1.82
2705 3545 5.123979 GTGAGGCTCCACGAAGATTATTTTT 59.876 40.000 12.86 0.00 0.00 1.94
2725 3565 5.529014 TTTTGCTGAAACTTTGCAAGAAC 57.471 34.783 0.00 0.00 45.52 3.01
2726 3566 3.865011 TGCTGAAACTTTGCAAGAACA 57.135 38.095 0.00 0.00 33.48 3.18
2727 3567 4.389890 TGCTGAAACTTTGCAAGAACAT 57.610 36.364 0.00 0.00 33.48 2.71
2728 3568 4.362279 TGCTGAAACTTTGCAAGAACATC 58.638 39.130 0.00 0.00 33.48 3.06
2729 3569 4.142204 TGCTGAAACTTTGCAAGAACATCA 60.142 37.500 0.00 1.87 33.48 3.07
2730 3570 4.805192 GCTGAAACTTTGCAAGAACATCAA 59.195 37.500 0.00 0.00 0.00 2.57
2731 3571 5.291614 GCTGAAACTTTGCAAGAACATCAAA 59.708 36.000 0.00 0.00 0.00 2.69
2732 3572 6.018507 GCTGAAACTTTGCAAGAACATCAAAT 60.019 34.615 0.00 0.00 0.00 2.32
2733 3573 7.467557 TGAAACTTTGCAAGAACATCAAATC 57.532 32.000 0.00 0.00 0.00 2.17
2734 3574 7.267128 TGAAACTTTGCAAGAACATCAAATCT 58.733 30.769 0.00 0.00 0.00 2.40
2735 3575 7.765360 TGAAACTTTGCAAGAACATCAAATCTT 59.235 29.630 0.00 0.00 36.35 2.40
2736 3576 8.496707 AAACTTTGCAAGAACATCAAATCTTT 57.503 26.923 0.00 0.00 33.73 2.52
2737 3577 7.473027 ACTTTGCAAGAACATCAAATCTTTG 57.527 32.000 0.00 0.00 39.48 2.77
2787 3627 4.695455 ACGAATTTACTGTTCATGAGGGTG 59.305 41.667 0.00 0.00 0.00 4.61
2792 3632 1.909302 ACTGTTCATGAGGGTGTAGGG 59.091 52.381 0.00 0.00 0.00 3.53
2793 3633 1.210478 CTGTTCATGAGGGTGTAGGGG 59.790 57.143 0.00 0.00 0.00 4.79
2794 3634 0.107165 GTTCATGAGGGTGTAGGGGC 60.107 60.000 0.00 0.00 0.00 5.80
2809 3649 3.077907 GGCACCTGGGAGCTGTTA 58.922 61.111 12.19 0.00 32.43 2.41
2811 3651 1.374947 GCACCTGGGAGCTGTTACA 59.625 57.895 0.00 0.00 0.00 2.41
2812 3652 0.955919 GCACCTGGGAGCTGTTACAC 60.956 60.000 0.00 0.00 0.00 2.90
2816 3656 1.073923 CCTGGGAGCTGTTACACCTTT 59.926 52.381 0.00 0.00 0.00 3.11
2817 3657 2.427506 CTGGGAGCTGTTACACCTTTC 58.572 52.381 0.00 0.00 0.00 2.62
2819 3659 2.038557 TGGGAGCTGTTACACCTTTCTC 59.961 50.000 0.00 0.00 0.00 2.87
2861 3707 4.920340 CACGATCATCTATTGTAGTGGAGC 59.080 45.833 0.00 0.00 30.44 4.70
2862 3708 4.830046 ACGATCATCTATTGTAGTGGAGCT 59.170 41.667 0.00 0.00 29.73 4.09
2863 3709 5.303078 ACGATCATCTATTGTAGTGGAGCTT 59.697 40.000 0.00 0.00 29.73 3.74
2864 3710 6.183360 ACGATCATCTATTGTAGTGGAGCTTT 60.183 38.462 0.00 0.00 29.73 3.51
2865 3711 6.145209 CGATCATCTATTGTAGTGGAGCTTTG 59.855 42.308 0.00 0.00 0.00 2.77
2866 3712 5.118990 TCATCTATTGTAGTGGAGCTTTGC 58.881 41.667 0.00 0.00 0.00 3.68
2867 3713 4.826274 TCTATTGTAGTGGAGCTTTGCT 57.174 40.909 0.00 0.00 43.88 3.91
2868 3714 5.932619 TCTATTGTAGTGGAGCTTTGCTA 57.067 39.130 0.00 0.00 39.88 3.49
2869 3715 5.661458 TCTATTGTAGTGGAGCTTTGCTAC 58.339 41.667 12.61 12.61 39.88 3.58
2876 3722 2.683968 TGGAGCTTTGCTACAGTTACG 58.316 47.619 0.00 0.00 45.48 3.18
2877 3723 2.000447 GGAGCTTTGCTACAGTTACGG 59.000 52.381 0.00 0.00 39.71 4.02
2878 3724 2.000447 GAGCTTTGCTACAGTTACGGG 59.000 52.381 0.00 0.00 39.88 5.28
2879 3725 1.621814 AGCTTTGCTACAGTTACGGGA 59.378 47.619 0.00 0.00 36.99 5.14
2880 3726 2.236395 AGCTTTGCTACAGTTACGGGAT 59.764 45.455 0.00 0.00 36.99 3.85
2881 3727 2.351726 GCTTTGCTACAGTTACGGGATG 59.648 50.000 0.00 0.00 0.00 3.51
2882 3728 3.857052 CTTTGCTACAGTTACGGGATGA 58.143 45.455 0.00 0.00 0.00 2.92
2883 3729 3.965379 TTGCTACAGTTACGGGATGAA 57.035 42.857 0.00 0.00 0.00 2.57
2884 3730 3.965379 TGCTACAGTTACGGGATGAAA 57.035 42.857 0.00 0.00 0.00 2.69
2885 3731 3.592059 TGCTACAGTTACGGGATGAAAC 58.408 45.455 0.00 0.00 0.00 2.78
2886 3732 3.259876 TGCTACAGTTACGGGATGAAACT 59.740 43.478 0.00 0.00 33.82 2.66
2887 3733 4.251268 GCTACAGTTACGGGATGAAACTT 58.749 43.478 0.00 0.00 31.21 2.66
2888 3734 5.047164 TGCTACAGTTACGGGATGAAACTTA 60.047 40.000 0.00 0.00 31.21 2.24
2889 3735 5.290400 GCTACAGTTACGGGATGAAACTTAC 59.710 44.000 0.00 0.00 31.21 2.34
2890 3736 4.240096 ACAGTTACGGGATGAAACTTACG 58.760 43.478 0.00 0.00 31.21 3.18
2891 3737 3.615496 CAGTTACGGGATGAAACTTACGG 59.385 47.826 0.00 0.00 31.21 4.02
2892 3738 3.511146 AGTTACGGGATGAAACTTACGGA 59.489 43.478 0.00 0.00 29.25 4.69
2893 3739 4.161001 AGTTACGGGATGAAACTTACGGAT 59.839 41.667 0.00 0.00 29.25 4.18
2894 3740 3.622166 ACGGGATGAAACTTACGGATT 57.378 42.857 0.00 0.00 0.00 3.01
2895 3741 3.267483 ACGGGATGAAACTTACGGATTG 58.733 45.455 0.00 0.00 0.00 2.67
2896 3742 3.267483 CGGGATGAAACTTACGGATTGT 58.733 45.455 0.00 0.00 0.00 2.71
2897 3743 4.081531 ACGGGATGAAACTTACGGATTGTA 60.082 41.667 0.00 0.00 0.00 2.41
2898 3744 4.506654 CGGGATGAAACTTACGGATTGTAG 59.493 45.833 0.00 0.00 33.75 2.74
2899 3745 5.425630 GGGATGAAACTTACGGATTGTAGT 58.574 41.667 0.00 0.00 33.75 2.73
2900 3746 5.878669 GGGATGAAACTTACGGATTGTAGTT 59.121 40.000 0.00 0.00 33.75 2.24
2901 3747 7.043565 GGGATGAAACTTACGGATTGTAGTTA 58.956 38.462 0.00 0.00 33.75 2.24
2902 3748 7.713942 GGGATGAAACTTACGGATTGTAGTTAT 59.286 37.037 0.00 0.00 33.75 1.89
2903 3749 8.548721 GGATGAAACTTACGGATTGTAGTTATG 58.451 37.037 0.00 0.00 33.75 1.90
2904 3750 7.837202 TGAAACTTACGGATTGTAGTTATGG 57.163 36.000 0.00 0.00 33.75 2.74
2905 3751 6.819649 TGAAACTTACGGATTGTAGTTATGGG 59.180 38.462 0.00 0.00 33.75 4.00
2906 3752 4.700700 ACTTACGGATTGTAGTTATGGGC 58.299 43.478 0.00 0.00 33.75 5.36
2907 3753 4.407945 ACTTACGGATTGTAGTTATGGGCT 59.592 41.667 0.00 0.00 33.75 5.19
2908 3754 3.194005 ACGGATTGTAGTTATGGGCTG 57.806 47.619 0.00 0.00 0.00 4.85
2909 3755 2.769663 ACGGATTGTAGTTATGGGCTGA 59.230 45.455 0.00 0.00 0.00 4.26
2910 3756 3.391296 ACGGATTGTAGTTATGGGCTGAT 59.609 43.478 0.00 0.00 0.00 2.90
2911 3757 3.748048 CGGATTGTAGTTATGGGCTGATG 59.252 47.826 0.00 0.00 0.00 3.07
2912 3758 4.074970 GGATTGTAGTTATGGGCTGATGG 58.925 47.826 0.00 0.00 0.00 3.51
2913 3759 4.446311 GGATTGTAGTTATGGGCTGATGGT 60.446 45.833 0.00 0.00 0.00 3.55
2914 3760 3.558931 TGTAGTTATGGGCTGATGGTG 57.441 47.619 0.00 0.00 0.00 4.17
2915 3761 2.172505 TGTAGTTATGGGCTGATGGTGG 59.827 50.000 0.00 0.00 0.00 4.61
2916 3762 0.106519 AGTTATGGGCTGATGGTGGC 60.107 55.000 0.00 0.00 0.00 5.01
3297 4143 3.086733 GAAATCAGGGGCGAAGAGG 57.913 57.895 0.00 0.00 0.00 3.69
3298 4144 0.253327 GAAATCAGGGGCGAAGAGGT 59.747 55.000 0.00 0.00 0.00 3.85
3299 4145 0.698818 AAATCAGGGGCGAAGAGGTT 59.301 50.000 0.00 0.00 0.00 3.50
3300 4146 1.580059 AATCAGGGGCGAAGAGGTTA 58.420 50.000 0.00 0.00 0.00 2.85
3301 4147 1.123928 ATCAGGGGCGAAGAGGTTAG 58.876 55.000 0.00 0.00 0.00 2.34
3302 4148 1.153349 CAGGGGCGAAGAGGTTAGC 60.153 63.158 0.00 0.00 33.77 3.09
3303 4149 2.202892 GGGGCGAAGAGGTTAGCG 60.203 66.667 0.00 0.00 35.27 4.26
3304 4150 2.577593 GGGCGAAGAGGTTAGCGT 59.422 61.111 0.00 0.00 35.27 5.07
3305 4151 1.810030 GGGCGAAGAGGTTAGCGTG 60.810 63.158 0.00 0.00 35.27 5.34
3306 4152 1.810030 GGCGAAGAGGTTAGCGTGG 60.810 63.158 0.00 0.00 35.27 4.94
3307 4153 1.810030 GCGAAGAGGTTAGCGTGGG 60.810 63.158 0.00 0.00 0.00 4.61
3308 4154 1.153628 CGAAGAGGTTAGCGTGGGG 60.154 63.158 0.00 0.00 0.00 4.96
3309 4155 1.601419 CGAAGAGGTTAGCGTGGGGA 61.601 60.000 0.00 0.00 0.00 4.81
3310 4156 0.175989 GAAGAGGTTAGCGTGGGGAG 59.824 60.000 0.00 0.00 0.00 4.30
3311 4157 1.265454 AAGAGGTTAGCGTGGGGAGG 61.265 60.000 0.00 0.00 0.00 4.30
3312 4158 1.684734 GAGGTTAGCGTGGGGAGGA 60.685 63.158 0.00 0.00 0.00 3.71
3313 4159 1.957765 GAGGTTAGCGTGGGGAGGAC 61.958 65.000 0.00 0.00 0.00 3.85
3314 4160 2.288025 GGTTAGCGTGGGGAGGACA 61.288 63.158 0.00 0.00 0.00 4.02
3315 4161 1.079336 GTTAGCGTGGGGAGGACAC 60.079 63.158 0.00 0.00 35.55 3.67
3327 4173 2.176792 GGACACGTCCGTCCGTAC 59.823 66.667 9.11 0.00 45.77 3.67
3328 4174 3.651480 GGACACGTCCGTCCGTACG 62.651 68.421 8.69 8.69 45.77 3.67
3337 4183 3.096791 GTCCGTACGAGGAGTCCG 58.903 66.667 18.76 0.00 41.68 4.79
3338 4184 1.743252 GTCCGTACGAGGAGTCCGT 60.743 63.158 18.76 1.29 41.68 4.69
3339 4185 0.460284 GTCCGTACGAGGAGTCCGTA 60.460 60.000 18.76 0.22 41.68 4.02
3340 4186 0.179100 TCCGTACGAGGAGTCCGTAG 60.179 60.000 18.76 1.68 42.24 3.51
3341 4187 1.640604 CGTACGAGGAGTCCGTAGC 59.359 63.158 10.44 0.00 42.24 3.58
3342 4188 0.809241 CGTACGAGGAGTCCGTAGCT 60.809 60.000 10.44 0.00 42.24 3.32
3343 4189 1.536922 CGTACGAGGAGTCCGTAGCTA 60.537 57.143 10.44 0.00 42.24 3.32
3344 4190 2.134346 GTACGAGGAGTCCGTAGCTAG 58.866 57.143 2.76 0.00 42.24 3.42
3345 4191 0.540923 ACGAGGAGTCCGTAGCTAGT 59.459 55.000 2.76 0.00 38.61 2.57
3346 4192 1.759445 ACGAGGAGTCCGTAGCTAGTA 59.241 52.381 2.76 0.00 38.61 1.82
3347 4193 2.224018 ACGAGGAGTCCGTAGCTAGTAG 60.224 54.545 2.76 0.00 38.61 2.57
3348 4194 2.224018 CGAGGAGTCCGTAGCTAGTAGT 60.224 54.545 2.76 0.00 0.00 2.73
3349 4195 3.392882 GAGGAGTCCGTAGCTAGTAGTC 58.607 54.545 2.76 0.00 0.00 2.59
3350 4196 2.104622 AGGAGTCCGTAGCTAGTAGTCC 59.895 54.545 2.76 12.79 0.00 3.85
3351 4197 2.134346 GAGTCCGTAGCTAGTAGTCCG 58.866 57.143 0.00 0.00 0.00 4.79
3352 4198 1.484240 AGTCCGTAGCTAGTAGTCCGT 59.516 52.381 0.00 0.00 0.00 4.69
3353 4199 2.695666 AGTCCGTAGCTAGTAGTCCGTA 59.304 50.000 0.00 0.00 0.00 4.02
3354 4200 3.133003 AGTCCGTAGCTAGTAGTCCGTAA 59.867 47.826 0.00 0.00 0.00 3.18
3355 4201 3.492756 GTCCGTAGCTAGTAGTCCGTAAG 59.507 52.174 0.00 0.00 0.00 2.34
3356 4202 3.133003 TCCGTAGCTAGTAGTCCGTAAGT 59.867 47.826 0.00 0.00 0.00 2.24
3357 4203 3.247173 CCGTAGCTAGTAGTCCGTAAGTG 59.753 52.174 0.00 0.00 0.00 3.16
3358 4204 3.868077 CGTAGCTAGTAGTCCGTAAGTGT 59.132 47.826 0.00 0.00 0.00 3.55
3359 4205 5.043903 CGTAGCTAGTAGTCCGTAAGTGTA 58.956 45.833 0.00 0.00 0.00 2.90
3360 4206 5.174761 CGTAGCTAGTAGTCCGTAAGTGTAG 59.825 48.000 0.00 0.00 0.00 2.74
3361 4207 4.450053 AGCTAGTAGTCCGTAAGTGTAGG 58.550 47.826 0.00 0.00 0.00 3.18
3362 4208 4.163078 AGCTAGTAGTCCGTAAGTGTAGGA 59.837 45.833 0.00 0.00 0.00 2.94
3363 4209 5.062528 GCTAGTAGTCCGTAAGTGTAGGAT 58.937 45.833 0.00 0.00 36.34 3.24
3364 4210 5.530543 GCTAGTAGTCCGTAAGTGTAGGATT 59.469 44.000 0.00 0.00 36.34 3.01
3365 4211 6.039159 GCTAGTAGTCCGTAAGTGTAGGATTT 59.961 42.308 0.00 0.00 36.34 2.17
3366 4212 6.847421 AGTAGTCCGTAAGTGTAGGATTTT 57.153 37.500 0.00 0.00 36.34 1.82
3367 4213 7.237209 AGTAGTCCGTAAGTGTAGGATTTTT 57.763 36.000 0.00 0.00 36.34 1.94
3368 4214 7.095270 AGTAGTCCGTAAGTGTAGGATTTTTG 58.905 38.462 0.00 0.00 36.34 2.44
3369 4215 6.105397 AGTCCGTAAGTGTAGGATTTTTGA 57.895 37.500 0.00 0.00 36.34 2.69
3370 4216 6.708285 AGTCCGTAAGTGTAGGATTTTTGAT 58.292 36.000 0.00 0.00 36.34 2.57
3371 4217 7.166167 AGTCCGTAAGTGTAGGATTTTTGATT 58.834 34.615 0.00 0.00 36.34 2.57
3372 4218 7.119262 AGTCCGTAAGTGTAGGATTTTTGATTG 59.881 37.037 0.00 0.00 36.34 2.67
3373 4219 6.938030 TCCGTAAGTGTAGGATTTTTGATTGT 59.062 34.615 0.00 0.00 0.00 2.71
3374 4220 7.021196 CCGTAAGTGTAGGATTTTTGATTGTG 58.979 38.462 0.00 0.00 0.00 3.33
3375 4221 7.094975 CCGTAAGTGTAGGATTTTTGATTGTGA 60.095 37.037 0.00 0.00 0.00 3.58
3376 4222 7.957484 CGTAAGTGTAGGATTTTTGATTGTGAG 59.043 37.037 0.00 0.00 0.00 3.51
3377 4223 6.259550 AGTGTAGGATTTTTGATTGTGAGC 57.740 37.500 0.00 0.00 0.00 4.26
3378 4224 5.088739 GTGTAGGATTTTTGATTGTGAGCG 58.911 41.667 0.00 0.00 0.00 5.03
3379 4225 3.855689 AGGATTTTTGATTGTGAGCGG 57.144 42.857 0.00 0.00 0.00 5.52
3426 4305 4.380678 CAGATTGTTGTGAGCGTTGAATTG 59.619 41.667 0.00 0.00 0.00 2.32
3445 4324 9.500864 TTGAATTGCAACTTTTTATTTTTCAGC 57.499 25.926 0.00 0.00 0.00 4.26
3446 4325 8.891720 TGAATTGCAACTTTTTATTTTTCAGCT 58.108 25.926 0.00 0.00 0.00 4.24
3447 4326 9.161684 GAATTGCAACTTTTTATTTTTCAGCTG 57.838 29.630 7.63 7.63 0.00 4.24
3449 4328 5.007528 TGCAACTTTTTATTTTTCAGCTGCC 59.992 36.000 9.47 0.00 0.00 4.85
3450 4329 5.237127 GCAACTTTTTATTTTTCAGCTGCCT 59.763 36.000 9.47 0.00 0.00 4.75
3452 4331 7.042119 GCAACTTTTTATTTTTCAGCTGCCTAA 60.042 33.333 9.47 2.68 0.00 2.69
3453 4332 8.490355 CAACTTTTTATTTTTCAGCTGCCTAAG 58.510 33.333 9.47 4.80 0.00 2.18
3519 4402 6.859112 TCTCTTTTACTTCTAGTCATGCCT 57.141 37.500 0.00 0.00 0.00 4.75
3520 4403 6.634805 TCTCTTTTACTTCTAGTCATGCCTG 58.365 40.000 0.00 0.00 0.00 4.85
3561 4444 2.656560 ATGTGTAAGCTCACTCGGAC 57.343 50.000 7.05 0.00 38.90 4.79
3713 4633 7.393234 CAGATGACCATAAAAGGTTTCCTGTTA 59.607 37.037 1.53 1.53 43.38 2.41
3717 4637 7.612633 TGACCATAAAAGGTTTCCTGTTATACC 59.387 37.037 9.94 0.00 40.86 2.73
3831 4751 6.179756 TCTGCTCTAATGGCTCAATTTTACA 58.820 36.000 0.00 0.00 0.00 2.41
4076 5749 6.424509 TGATTCTTTCATTTGTTGTGGCATTC 59.575 34.615 0.00 0.00 0.00 2.67
4255 5942 3.936772 GATGGTTGGGCTCCGGCAA 62.937 63.158 0.00 0.00 40.87 4.52
4318 6005 2.417239 GGAGCGGATACTCATCTACGAG 59.583 54.545 0.00 0.00 38.50 4.18
4343 6030 3.492102 TGCAGAACAAGAGCCTAAACT 57.508 42.857 0.00 0.00 0.00 2.66
4727 7010 2.744202 GTTGTTCGCTGTGGATCAGATT 59.256 45.455 0.00 0.00 46.27 2.40
4787 7070 4.510038 AAAATGCAAGCATCGATATCCC 57.490 40.909 8.14 0.00 35.31 3.85
5074 7357 8.787852 ACACATAATTCCTTTTCTTCTTGAGAC 58.212 33.333 0.00 0.00 33.02 3.36
5104 7391 9.232082 GCATCAAGCGTGAACATATTATAAAAA 57.768 29.630 6.39 0.00 37.30 1.94
5293 7580 1.118965 TCTGCGTCCAGGAAACTCCA 61.119 55.000 0.00 0.00 39.61 3.86
5302 7589 2.038952 CCAGGAAACTCCATGTGACAGA 59.961 50.000 0.00 0.00 39.61 3.41
5342 7629 0.948623 TTCCATGTTGACGAGCACGG 60.949 55.000 8.74 0.00 44.46 4.94
5444 7731 2.233922 GAGACCGAACTCTTGATCCCAA 59.766 50.000 0.00 0.00 34.47 4.12
5445 7732 2.028020 AGACCGAACTCTTGATCCCAAC 60.028 50.000 0.00 0.00 0.00 3.77
5446 7733 1.978580 ACCGAACTCTTGATCCCAACT 59.021 47.619 0.00 0.00 0.00 3.16
5508 7795 1.305930 GCCTCCTTGTTAGCAACCGG 61.306 60.000 0.00 0.00 0.00 5.28
5573 7869 1.588404 CGCACGGTACATAAGCTCTTG 59.412 52.381 0.00 0.00 0.00 3.02
5576 7872 2.860735 CACGGTACATAAGCTCTTGAGC 59.139 50.000 14.16 14.16 0.00 4.26
5582 7879 5.533154 GGTACATAAGCTCTTGAGCTCTCTA 59.467 44.000 23.17 13.67 45.54 2.43
5673 7970 2.095567 GTGCTCTGAAAACGATGCACAT 60.096 45.455 10.44 0.00 46.64 3.21
5707 8004 0.668535 GCTTCGGGTTTGATATGGCC 59.331 55.000 0.00 0.00 0.00 5.36
5713 8010 4.601084 TCGGGTTTGATATGGCCTTTTAA 58.399 39.130 3.32 0.00 0.00 1.52
5742 8039 5.621197 TTACATGTTCGGAAGTCCAATTG 57.379 39.130 2.30 0.00 35.14 2.32
5902 8199 6.043411 CACCTTACAAGTCACTAAGGCTATC 58.957 44.000 4.91 0.00 41.99 2.08
5905 8202 7.618512 ACCTTACAAGTCACTAAGGCTATCTAA 59.381 37.037 4.91 0.00 41.99 2.10
5940 8237 9.685828 TGGTTTTTAATGATAAAAAGTTCTCCG 57.314 29.630 6.72 0.00 46.33 4.63
5997 8294 9.197694 AGCTATGATTCGTTGTCTATTAATGAC 57.802 33.333 0.00 4.86 35.21 3.06
6007 8333 8.652463 CGTTGTCTATTAATGACATTGTGTACA 58.348 33.333 11.05 6.12 42.95 2.90
6087 8421 4.219115 CAGATCAGCTCCCTTACTCCTTA 58.781 47.826 0.00 0.00 0.00 2.69
6091 8425 2.432510 CAGCTCCCTTACTCCTTACCTG 59.567 54.545 0.00 0.00 0.00 4.00
6112 8447 6.183360 ACCTGAGGCATTATCTAGTCTTGAAG 60.183 42.308 0.00 0.00 0.00 3.02
6150 8485 4.320421 CCGCATTTTTCAGAGAATGTGTGA 60.320 41.667 15.49 0.00 40.41 3.58
6153 8488 6.183359 CGCATTTTTCAGAGAATGTGTGATTG 60.183 38.462 11.34 0.00 38.37 2.67
6298 9013 5.845985 TTTCTGACGCTTGAGATAAAGTG 57.154 39.130 0.00 0.00 42.22 3.16
6299 9014 3.254060 TCTGACGCTTGAGATAAAGTGC 58.746 45.455 0.00 0.00 40.58 4.40
6305 9020 3.240861 CGCTTGAGATAAAGTGCGTACTC 59.759 47.826 6.63 0.00 38.81 2.59
6306 9021 3.552294 GCTTGAGATAAAGTGCGTACTCC 59.448 47.826 6.63 0.00 35.69 3.85
6307 9022 4.744570 CTTGAGATAAAGTGCGTACTCCA 58.255 43.478 6.63 0.00 35.69 3.86
6308 9023 4.106029 TGAGATAAAGTGCGTACTCCAC 57.894 45.455 6.63 5.64 35.69 4.02
6309 9024 3.508402 TGAGATAAAGTGCGTACTCCACA 59.492 43.478 6.63 0.00 35.69 4.17
6310 9025 4.021807 TGAGATAAAGTGCGTACTCCACAA 60.022 41.667 6.63 0.00 35.69 3.33
6311 9026 4.495422 AGATAAAGTGCGTACTCCACAAG 58.505 43.478 6.63 0.00 35.69 3.16
6312 9027 2.614829 AAAGTGCGTACTCCACAAGT 57.385 45.000 6.63 0.00 42.33 3.16
6313 9028 2.150397 AAGTGCGTACTCCACAAGTC 57.850 50.000 6.63 0.00 39.55 3.01
6314 9029 1.037493 AGTGCGTACTCCACAAGTCA 58.963 50.000 0.00 0.00 39.55 3.41
6315 9030 1.411246 AGTGCGTACTCCACAAGTCAA 59.589 47.619 0.00 0.00 39.55 3.18
6316 9031 1.525619 GTGCGTACTCCACAAGTCAAC 59.474 52.381 0.00 0.00 39.55 3.18
6317 9032 1.411246 TGCGTACTCCACAAGTCAACT 59.589 47.619 0.00 0.00 39.55 3.16
6318 9033 2.159014 TGCGTACTCCACAAGTCAACTT 60.159 45.455 0.00 0.00 39.55 2.66
6319 9034 2.870411 GCGTACTCCACAAGTCAACTTT 59.130 45.455 0.00 0.00 39.55 2.66
6320 9035 4.053295 GCGTACTCCACAAGTCAACTTTA 58.947 43.478 0.00 0.00 39.55 1.85
6321 9036 4.084693 GCGTACTCCACAAGTCAACTTTAC 60.085 45.833 0.00 0.00 39.55 2.01
6322 9037 4.446719 CGTACTCCACAAGTCAACTTTACC 59.553 45.833 0.00 0.00 39.55 2.85
6323 9038 4.497291 ACTCCACAAGTCAACTTTACCA 57.503 40.909 0.00 0.00 30.02 3.25
6324 9039 4.850680 ACTCCACAAGTCAACTTTACCAA 58.149 39.130 0.00 0.00 30.02 3.67
6325 9040 5.258051 ACTCCACAAGTCAACTTTACCAAA 58.742 37.500 0.00 0.00 30.02 3.28
6326 9041 5.712917 ACTCCACAAGTCAACTTTACCAAAA 59.287 36.000 0.00 0.00 30.02 2.44
6327 9042 5.956642 TCCACAAGTCAACTTTACCAAAAC 58.043 37.500 0.00 0.00 33.11 2.43
6328 9043 5.712917 TCCACAAGTCAACTTTACCAAAACT 59.287 36.000 0.00 0.00 33.11 2.66
6329 9044 6.209788 TCCACAAGTCAACTTTACCAAAACTT 59.790 34.615 0.00 0.00 33.11 2.66
6330 9045 6.310224 CCACAAGTCAACTTTACCAAAACTTG 59.690 38.462 9.98 9.98 38.28 3.16
6331 9046 6.310224 CACAAGTCAACTTTACCAAAACTTGG 59.690 38.462 14.60 3.84 44.79 3.61
6332 9047 6.209788 ACAAGTCAACTTTACCAAAACTTGGA 59.790 34.615 12.32 0.00 43.19 3.53
6333 9048 6.530181 CAAGTCAACTTTACCAAAACTTGGAC 59.470 38.462 12.32 0.00 43.19 4.02
6334 9049 6.436218 AAGTCAACTTTACCAAAACTTGGACT 59.564 34.615 12.32 0.13 42.77 3.85
6335 9050 7.039293 AAGTCAACTTTACCAAAACTTGGACTT 60.039 33.333 12.32 5.89 42.77 3.01
6344 9059 4.804108 CAAAACTTGGACTTCACAACACA 58.196 39.130 0.00 0.00 0.00 3.72
6345 9060 4.701956 AAACTTGGACTTCACAACACAG 57.298 40.909 0.00 0.00 0.00 3.66
6346 9061 3.350219 ACTTGGACTTCACAACACAGT 57.650 42.857 0.00 0.00 0.00 3.55
6347 9062 4.481368 ACTTGGACTTCACAACACAGTA 57.519 40.909 0.00 0.00 0.00 2.74
6348 9063 4.442706 ACTTGGACTTCACAACACAGTAG 58.557 43.478 0.00 0.00 0.00 2.57
6349 9064 4.081087 ACTTGGACTTCACAACACAGTAGT 60.081 41.667 0.00 0.00 0.00 2.73
6350 9065 5.128171 ACTTGGACTTCACAACACAGTAGTA 59.872 40.000 0.00 0.00 0.00 1.82
6351 9066 5.801531 TGGACTTCACAACACAGTAGTAT 57.198 39.130 0.00 0.00 0.00 2.12
6352 9067 6.904463 TGGACTTCACAACACAGTAGTATA 57.096 37.500 0.00 0.00 0.00 1.47
6353 9068 7.292713 TGGACTTCACAACACAGTAGTATAA 57.707 36.000 0.00 0.00 0.00 0.98
6354 9069 7.903145 TGGACTTCACAACACAGTAGTATAAT 58.097 34.615 0.00 0.00 0.00 1.28
6355 9070 7.817478 TGGACTTCACAACACAGTAGTATAATG 59.183 37.037 0.00 0.00 43.33 1.90
6356 9071 7.277981 GGACTTCACAACACAGTAGTATAATGG 59.722 40.741 0.00 0.00 41.72 3.16
6357 9072 7.676947 ACTTCACAACACAGTAGTATAATGGT 58.323 34.615 0.00 0.00 41.72 3.55
6358 9073 8.809066 ACTTCACAACACAGTAGTATAATGGTA 58.191 33.333 0.00 0.00 41.72 3.25
6359 9074 8.991243 TTCACAACACAGTAGTATAATGGTAC 57.009 34.615 0.00 0.00 41.72 3.34
6360 9075 8.357290 TCACAACACAGTAGTATAATGGTACT 57.643 34.615 0.00 0.00 41.72 2.73
6361 9076 8.248253 TCACAACACAGTAGTATAATGGTACTG 58.752 37.037 7.10 7.10 41.72 2.74
6362 9077 7.010183 CACAACACAGTAGTATAATGGTACTGC 59.990 40.741 8.33 0.00 45.06 4.40
6363 9078 7.093465 ACAACACAGTAGTATAATGGTACTGCT 60.093 37.037 8.33 3.52 45.06 4.24
6364 9079 8.410912 CAACACAGTAGTATAATGGTACTGCTA 58.589 37.037 8.33 0.00 45.06 3.49
6365 9080 8.529424 ACACAGTAGTATAATGGTACTGCTAA 57.471 34.615 8.33 0.00 45.06 3.09
6366 9081 8.974238 ACACAGTAGTATAATGGTACTGCTAAA 58.026 33.333 8.33 0.00 45.06 1.85
6367 9082 9.811995 CACAGTAGTATAATGGTACTGCTAAAA 57.188 33.333 8.33 0.00 45.06 1.52
6375 9090 6.422776 AATGGTACTGCTAAAAATCAGTCG 57.577 37.500 0.00 0.00 42.06 4.18
6376 9091 5.142061 TGGTACTGCTAAAAATCAGTCGA 57.858 39.130 0.00 0.00 42.06 4.20
6377 9092 5.730550 TGGTACTGCTAAAAATCAGTCGAT 58.269 37.500 0.00 0.00 42.06 3.59
6378 9093 6.170506 TGGTACTGCTAAAAATCAGTCGATT 58.829 36.000 0.00 0.00 43.94 3.34
6379 9094 6.092122 TGGTACTGCTAAAAATCAGTCGATTG 59.908 38.462 0.68 0.68 41.12 2.67
6380 9095 6.312918 GGTACTGCTAAAAATCAGTCGATTGA 59.687 38.462 13.38 13.38 41.12 2.57
6381 9096 6.414408 ACTGCTAAAAATCAGTCGATTGAG 57.586 37.500 16.14 2.83 41.12 3.02
6382 9097 6.166279 ACTGCTAAAAATCAGTCGATTGAGA 58.834 36.000 16.14 0.00 41.12 3.27
6383 9098 6.820656 ACTGCTAAAAATCAGTCGATTGAGAT 59.179 34.615 16.14 5.11 41.12 2.75
6384 9099 7.335422 ACTGCTAAAAATCAGTCGATTGAGATT 59.665 33.333 16.14 10.61 41.12 2.40
6385 9100 8.044060 TGCTAAAAATCAGTCGATTGAGATTT 57.956 30.769 16.14 18.50 41.12 2.17
6386 9101 8.177663 TGCTAAAAATCAGTCGATTGAGATTTC 58.822 33.333 19.83 11.77 41.12 2.17
6387 9102 7.371875 GCTAAAAATCAGTCGATTGAGATTTCG 59.628 37.037 19.83 16.44 41.12 3.46
6388 9103 4.785669 AATCAGTCGATTGAGATTTCGC 57.214 40.909 16.14 0.00 40.45 4.70
6389 9104 2.185262 TCAGTCGATTGAGATTTCGCG 58.815 47.619 6.51 0.00 35.39 5.87
6390 9105 2.159435 TCAGTCGATTGAGATTTCGCGA 60.159 45.455 3.71 3.71 35.39 5.87
6391 9106 2.598637 CAGTCGATTGAGATTTCGCGAA 59.401 45.455 19.38 19.38 35.39 4.70
6392 9107 2.854777 AGTCGATTGAGATTTCGCGAAG 59.145 45.455 22.21 7.12 35.39 3.79
6393 9108 2.599082 GTCGATTGAGATTTCGCGAAGT 59.401 45.455 22.21 19.80 35.39 3.01
6394 9109 2.852413 TCGATTGAGATTTCGCGAAGTC 59.148 45.455 30.24 30.24 35.39 3.01
6395 9110 2.854777 CGATTGAGATTTCGCGAAGTCT 59.145 45.455 37.17 37.17 39.62 3.24
6399 9114 2.869897 GAGATTTCGCGAAGTCTCAGT 58.130 47.619 43.90 27.63 46.80 3.41
6400 9115 2.849473 GAGATTTCGCGAAGTCTCAGTC 59.151 50.000 43.90 29.91 46.80 3.51
6401 9116 1.579808 GATTTCGCGAAGTCTCAGTCG 59.420 52.381 30.13 0.00 40.24 4.18
6402 9117 0.589708 TTTCGCGAAGTCTCAGTCGA 59.410 50.000 22.21 0.00 39.64 4.20
6403 9118 0.110328 TTCGCGAAGTCTCAGTCGAC 60.110 55.000 19.38 7.70 39.64 4.20
6404 9119 1.859564 CGCGAAGTCTCAGTCGACG 60.860 63.158 10.46 5.48 39.64 5.12
6405 9120 1.512310 GCGAAGTCTCAGTCGACGG 60.512 63.158 10.46 10.03 39.64 4.79
6406 9121 1.134901 CGAAGTCTCAGTCGACGGG 59.865 63.158 15.78 9.74 39.64 5.28
6407 9122 1.153997 GAAGTCTCAGTCGACGGGC 60.154 63.158 15.78 9.03 38.90 6.13
6408 9123 2.545165 GAAGTCTCAGTCGACGGGCC 62.545 65.000 15.78 0.00 38.90 5.80
6409 9124 3.371063 GTCTCAGTCGACGGGCCA 61.371 66.667 15.78 0.00 0.00 5.36
6410 9125 3.062466 TCTCAGTCGACGGGCCAG 61.062 66.667 15.78 1.85 0.00 4.85
6411 9126 4.803426 CTCAGTCGACGGGCCAGC 62.803 72.222 15.78 0.00 0.00 4.85
6422 9137 4.162690 GGCCAGCCGTCCGATCTT 62.163 66.667 0.00 0.00 0.00 2.40
6423 9138 2.586357 GCCAGCCGTCCGATCTTC 60.586 66.667 0.00 0.00 0.00 2.87
6424 9139 2.892640 CCAGCCGTCCGATCTTCA 59.107 61.111 0.00 0.00 0.00 3.02
6425 9140 1.227089 CCAGCCGTCCGATCTTCAG 60.227 63.158 0.00 0.00 0.00 3.02
6426 9141 1.880340 CAGCCGTCCGATCTTCAGC 60.880 63.158 0.00 0.00 0.00 4.26
6427 9142 2.184322 GCCGTCCGATCTTCAGCA 59.816 61.111 0.00 0.00 0.00 4.41
6428 9143 1.880340 GCCGTCCGATCTTCAGCAG 60.880 63.158 0.00 0.00 0.00 4.24
6429 9144 1.880340 CCGTCCGATCTTCAGCAGC 60.880 63.158 0.00 0.00 0.00 5.25
6430 9145 1.140589 CGTCCGATCTTCAGCAGCT 59.859 57.895 0.00 0.00 0.00 4.24
6431 9146 0.459237 CGTCCGATCTTCAGCAGCTT 60.459 55.000 0.00 0.00 0.00 3.74
6432 9147 1.005340 GTCCGATCTTCAGCAGCTTG 58.995 55.000 0.00 0.00 0.00 4.01
6433 9148 0.610174 TCCGATCTTCAGCAGCTTGT 59.390 50.000 0.00 0.00 0.00 3.16
6434 9149 1.824852 TCCGATCTTCAGCAGCTTGTA 59.175 47.619 0.00 0.00 0.00 2.41
6435 9150 2.159184 TCCGATCTTCAGCAGCTTGTAG 60.159 50.000 0.00 0.00 0.00 2.74
6436 9151 2.159184 CCGATCTTCAGCAGCTTGTAGA 60.159 50.000 0.00 0.00 0.00 2.59
6437 9152 3.492309 CCGATCTTCAGCAGCTTGTAGAT 60.492 47.826 7.12 7.12 37.74 1.98
6438 9153 4.118410 CGATCTTCAGCAGCTTGTAGATT 58.882 43.478 8.43 0.00 35.95 2.40
6439 9154 4.569966 CGATCTTCAGCAGCTTGTAGATTT 59.430 41.667 8.43 0.00 35.95 2.17
6440 9155 5.502058 CGATCTTCAGCAGCTTGTAGATTTG 60.502 44.000 8.43 2.95 35.95 2.32
6441 9156 3.438087 TCTTCAGCAGCTTGTAGATTTGC 59.562 43.478 0.00 0.00 35.09 3.68
6442 9157 1.733912 TCAGCAGCTTGTAGATTTGCG 59.266 47.619 0.00 0.00 39.63 4.85
6443 9158 1.466167 CAGCAGCTTGTAGATTTGCGT 59.534 47.619 0.00 0.00 39.63 5.24
6444 9159 2.095567 CAGCAGCTTGTAGATTTGCGTT 60.096 45.455 0.00 0.00 39.63 4.84
6445 9160 2.095567 AGCAGCTTGTAGATTTGCGTTG 60.096 45.455 0.00 0.00 39.63 4.10
6446 9161 2.855180 CAGCTTGTAGATTTGCGTTGG 58.145 47.619 0.00 0.00 0.00 3.77
6447 9162 1.812571 AGCTTGTAGATTTGCGTTGGG 59.187 47.619 0.00 0.00 0.00 4.12
6448 9163 1.135402 GCTTGTAGATTTGCGTTGGGG 60.135 52.381 0.00 0.00 0.00 4.96
6449 9164 1.472480 CTTGTAGATTTGCGTTGGGGG 59.528 52.381 0.00 0.00 0.00 5.40
6450 9165 0.963355 TGTAGATTTGCGTTGGGGGC 60.963 55.000 0.00 0.00 0.00 5.80
6451 9166 1.747367 TAGATTTGCGTTGGGGGCG 60.747 57.895 0.00 0.00 0.00 6.13
6458 9173 3.601685 CGTTGGGGGCGCTTTTGT 61.602 61.111 7.64 0.00 0.00 2.83
6459 9174 2.338620 GTTGGGGGCGCTTTTGTC 59.661 61.111 7.64 0.00 0.00 3.18
6460 9175 2.915137 TTGGGGGCGCTTTTGTCC 60.915 61.111 7.64 0.00 0.00 4.02
6461 9176 3.444818 TTGGGGGCGCTTTTGTCCT 62.445 57.895 7.64 0.00 0.00 3.85
6462 9177 2.600470 GGGGGCGCTTTTGTCCTT 60.600 61.111 7.64 0.00 0.00 3.36
6463 9178 2.650778 GGGGCGCTTTTGTCCTTG 59.349 61.111 7.64 0.00 0.00 3.61
6464 9179 2.200337 GGGGCGCTTTTGTCCTTGT 61.200 57.895 7.64 0.00 0.00 3.16
6465 9180 1.739667 GGGCGCTTTTGTCCTTGTT 59.260 52.632 7.64 0.00 0.00 2.83
6466 9181 0.104120 GGGCGCTTTTGTCCTTGTTT 59.896 50.000 7.64 0.00 0.00 2.83
6467 9182 1.487482 GGCGCTTTTGTCCTTGTTTC 58.513 50.000 7.64 0.00 0.00 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.859841 TAGAGACACTGAGCCCCGGA 61.860 60.000 0.73 0.00 0.00 5.14
1 2 0.757188 ATAGAGACACTGAGCCCCGG 60.757 60.000 0.00 0.00 0.00 5.73
2 3 1.067821 GAATAGAGACACTGAGCCCCG 59.932 57.143 0.00 0.00 0.00 5.73
153 165 0.391597 GAGGTGTGGACCAACGAAGA 59.608 55.000 0.00 0.00 45.98 2.87
155 167 0.391597 GAGAGGTGTGGACCAACGAA 59.608 55.000 0.00 0.00 45.98 3.85
157 169 1.004918 GGAGAGGTGTGGACCAACG 60.005 63.158 0.00 0.00 45.98 4.10
190 202 3.399330 CATACGGCCAAATGGTACCTAG 58.601 50.000 14.36 0.00 37.57 3.02
201 213 0.538118 GGTGAGTACCATACGGCCAA 59.462 55.000 2.24 0.00 46.71 4.52
264 276 4.751600 CCATTGCTTCAAAGAAAAAGGGAC 59.248 41.667 0.00 0.00 0.00 4.46
336 355 8.281212 ACTCTAAATAACCACATGTCAAATCC 57.719 34.615 0.00 0.00 0.00 3.01
338 357 9.912634 CAAACTCTAAATAACCACATGTCAAAT 57.087 29.630 0.00 0.00 0.00 2.32
344 363 6.308766 GCTTGCAAACTCTAAATAACCACATG 59.691 38.462 0.00 0.00 0.00 3.21
348 367 6.648879 AAGCTTGCAAACTCTAAATAACCA 57.351 33.333 2.20 0.00 0.00 3.67
502 521 9.128107 GCAATCTTCGTTGATTTTCTTCAATTA 57.872 29.630 3.63 0.00 37.88 1.40
515 534 3.250762 CAGGAAGTTGCAATCTTCGTTGA 59.749 43.478 22.69 0.00 41.26 3.18
516 535 3.558505 CAGGAAGTTGCAATCTTCGTTG 58.441 45.455 22.69 20.45 41.26 4.10
517 536 2.554032 CCAGGAAGTTGCAATCTTCGTT 59.446 45.455 22.69 16.02 41.26 3.85
519 538 2.160417 GTCCAGGAAGTTGCAATCTTCG 59.840 50.000 23.40 15.87 41.26 3.79
526 546 3.181467 CCAAAAATGTCCAGGAAGTTGCA 60.181 43.478 0.00 0.00 0.00 4.08
540 560 4.479619 GCTGTCAAGAGTAGCCAAAAATG 58.520 43.478 0.00 0.00 0.00 2.32
703 724 7.178451 TGTGTCCTAGACAGACTCATTGAAATA 59.822 37.037 0.00 0.00 43.57 1.40
704 725 6.014242 TGTGTCCTAGACAGACTCATTGAAAT 60.014 38.462 0.00 0.00 43.57 2.17
705 726 5.304357 TGTGTCCTAGACAGACTCATTGAAA 59.696 40.000 0.00 0.00 43.57 2.69
706 727 4.832823 TGTGTCCTAGACAGACTCATTGAA 59.167 41.667 0.00 0.00 43.57 2.69
707 728 4.407365 TGTGTCCTAGACAGACTCATTGA 58.593 43.478 0.00 0.00 43.57 2.57
708 729 4.790765 TGTGTCCTAGACAGACTCATTG 57.209 45.455 0.00 0.00 43.57 2.82
709 730 5.268387 AGATGTGTCCTAGACAGACTCATT 58.732 41.667 13.09 5.08 44.30 2.57
710 731 4.865905 AGATGTGTCCTAGACAGACTCAT 58.134 43.478 12.21 12.21 45.94 2.90
711 732 4.308526 AGATGTGTCCTAGACAGACTCA 57.691 45.455 0.00 0.00 43.57 3.41
712 733 5.676552 TCTAGATGTGTCCTAGACAGACTC 58.323 45.833 0.00 0.00 43.57 3.36
713 734 5.702065 TCTAGATGTGTCCTAGACAGACT 57.298 43.478 0.00 1.46 43.57 3.24
714 735 6.312399 CATCTAGATGTGTCCTAGACAGAC 57.688 45.833 22.42 0.00 43.57 3.51
756 777 8.982723 ACAAACATAGTAGACATCAGGTTAGAT 58.017 33.333 0.00 0.00 0.00 1.98
757 778 8.251026 CACAAACATAGTAGACATCAGGTTAGA 58.749 37.037 0.00 0.00 0.00 2.10
758 779 7.492669 CCACAAACATAGTAGACATCAGGTTAG 59.507 40.741 0.00 0.00 0.00 2.34
759 780 7.038587 ACCACAAACATAGTAGACATCAGGTTA 60.039 37.037 0.00 0.00 0.00 2.85
760 781 6.173339 CCACAAACATAGTAGACATCAGGTT 58.827 40.000 0.00 0.00 0.00 3.50
761 782 5.248477 ACCACAAACATAGTAGACATCAGGT 59.752 40.000 0.00 0.00 0.00 4.00
762 783 5.734720 ACCACAAACATAGTAGACATCAGG 58.265 41.667 0.00 0.00 0.00 3.86
763 784 7.672983 AAACCACAAACATAGTAGACATCAG 57.327 36.000 0.00 0.00 0.00 2.90
764 785 9.733556 AATAAACCACAAACATAGTAGACATCA 57.266 29.630 0.00 0.00 0.00 3.07
806 827 4.608948 ACACAACAACCAGGAACAAAAA 57.391 36.364 0.00 0.00 0.00 1.94
807 828 4.608948 AACACAACAACCAGGAACAAAA 57.391 36.364 0.00 0.00 0.00 2.44
808 829 5.923733 ATAACACAACAACCAGGAACAAA 57.076 34.783 0.00 0.00 0.00 2.83
809 830 5.923733 AATAACACAACAACCAGGAACAA 57.076 34.783 0.00 0.00 0.00 2.83
810 831 5.186021 ACAAATAACACAACAACCAGGAACA 59.814 36.000 0.00 0.00 0.00 3.18
811 832 5.656480 ACAAATAACACAACAACCAGGAAC 58.344 37.500 0.00 0.00 0.00 3.62
812 833 5.923733 ACAAATAACACAACAACCAGGAA 57.076 34.783 0.00 0.00 0.00 3.36
813 834 6.358178 TCTACAAATAACACAACAACCAGGA 58.642 36.000 0.00 0.00 0.00 3.86
814 835 6.627395 TCTACAAATAACACAACAACCAGG 57.373 37.500 0.00 0.00 0.00 4.45
815 836 6.636850 GCTTCTACAAATAACACAACAACCAG 59.363 38.462 0.00 0.00 0.00 4.00
816 837 6.320164 AGCTTCTACAAATAACACAACAACCA 59.680 34.615 0.00 0.00 0.00 3.67
817 838 6.735130 AGCTTCTACAAATAACACAACAACC 58.265 36.000 0.00 0.00 0.00 3.77
818 839 9.382244 CTAAGCTTCTACAAATAACACAACAAC 57.618 33.333 0.00 0.00 0.00 3.32
819 840 9.332502 TCTAAGCTTCTACAAATAACACAACAA 57.667 29.630 0.00 0.00 0.00 2.83
820 841 8.896320 TCTAAGCTTCTACAAATAACACAACA 57.104 30.769 0.00 0.00 0.00 3.33
821 842 9.760660 CATCTAAGCTTCTACAAATAACACAAC 57.239 33.333 0.00 0.00 0.00 3.32
822 843 9.502091 ACATCTAAGCTTCTACAAATAACACAA 57.498 29.630 0.00 0.00 0.00 3.33
823 844 8.935844 CACATCTAAGCTTCTACAAATAACACA 58.064 33.333 0.00 0.00 0.00 3.72
824 845 9.151471 TCACATCTAAGCTTCTACAAATAACAC 57.849 33.333 0.00 0.00 0.00 3.32
825 846 9.151471 GTCACATCTAAGCTTCTACAAATAACA 57.849 33.333 0.00 0.00 0.00 2.41
826 847 9.151471 TGTCACATCTAAGCTTCTACAAATAAC 57.849 33.333 0.00 0.00 0.00 1.89
827 848 9.890629 ATGTCACATCTAAGCTTCTACAAATAA 57.109 29.630 0.00 0.00 0.00 1.40
828 849 9.534565 GATGTCACATCTAAGCTTCTACAAATA 57.465 33.333 10.81 0.00 0.00 1.40
829 850 7.497249 GGATGTCACATCTAAGCTTCTACAAAT 59.503 37.037 17.46 0.00 0.00 2.32
830 851 6.818644 GGATGTCACATCTAAGCTTCTACAAA 59.181 38.462 17.46 0.00 0.00 2.83
831 852 6.155221 AGGATGTCACATCTAAGCTTCTACAA 59.845 38.462 17.46 0.00 0.00 2.41
832 853 5.658634 AGGATGTCACATCTAAGCTTCTACA 59.341 40.000 17.46 0.00 0.00 2.74
833 854 6.155475 AGGATGTCACATCTAAGCTTCTAC 57.845 41.667 17.46 0.00 0.00 2.59
834 855 6.798427 AAGGATGTCACATCTAAGCTTCTA 57.202 37.500 17.46 0.00 0.00 2.10
835 856 5.690464 AAGGATGTCACATCTAAGCTTCT 57.310 39.130 17.46 1.36 0.00 2.85
836 857 7.849804 TTTAAGGATGTCACATCTAAGCTTC 57.150 36.000 17.46 0.00 0.00 3.86
837 858 8.635765 TTTTTAAGGATGTCACATCTAAGCTT 57.364 30.769 17.46 13.56 0.00 3.74
882 903 9.950496 ACTGATAGAGATTGAAATACAGTTTGT 57.050 29.630 0.00 0.00 33.29 2.83
888 909 9.481340 GCATGTACTGATAGAGATTGAAATACA 57.519 33.333 0.00 0.00 0.00 2.29
889 910 8.642885 CGCATGTACTGATAGAGATTGAAATAC 58.357 37.037 0.00 0.00 0.00 1.89
1095 1119 1.460699 GGTGAGGTTCTGGCCCTTT 59.539 57.895 0.00 0.00 30.60 3.11
1173 1209 2.561858 GAGGTACCTCTTCGTGGAAACT 59.438 50.000 31.12 0.00 39.80 2.66
1175 1211 1.542915 CGAGGTACCTCTTCGTGGAAA 59.457 52.381 33.70 0.00 40.08 3.13
1176 1212 1.171308 CGAGGTACCTCTTCGTGGAA 58.829 55.000 33.70 0.00 40.08 3.53
1182 1224 1.001597 CATACGCCGAGGTACCTCTTC 60.002 57.143 33.70 24.33 40.69 2.87
1198 1240 2.344025 GTTGGACACGGAGAACCATAC 58.656 52.381 0.00 0.00 35.59 2.39
1305 1351 1.219124 GGAGCCATCGAGCAGAACA 59.781 57.895 0.00 0.00 34.23 3.18
1427 1485 1.407299 CGAATGATTGCCACAGGGAGA 60.407 52.381 0.00 0.00 35.59 3.71
1650 1708 0.524862 GGACGCCGTTGAAGTAGAGA 59.475 55.000 0.00 0.00 0.00 3.10
1719 1777 1.304713 GTAGGTGACCTCCCACGGA 60.305 63.158 7.77 0.00 37.91 4.69
1923 1996 4.473520 CAGCCGCAGAACCCCGAT 62.474 66.667 0.00 0.00 0.00 4.18
2373 2516 6.325919 TGTTTGTCCAATGTGAGTAAATCC 57.674 37.500 0.00 0.00 0.00 3.01
2471 3311 2.626840 GGGTGCTGAGAATTCTGTCTC 58.373 52.381 14.00 0.00 43.75 3.36
2472 3312 1.066573 CGGGTGCTGAGAATTCTGTCT 60.067 52.381 14.00 0.00 0.00 3.41
2473 3313 1.066858 TCGGGTGCTGAGAATTCTGTC 60.067 52.381 14.00 0.00 0.00 3.51
2474 3314 0.976641 TCGGGTGCTGAGAATTCTGT 59.023 50.000 14.00 0.00 0.00 3.41
2475 3315 1.066573 ACTCGGGTGCTGAGAATTCTG 60.067 52.381 14.00 0.00 39.05 3.02
2476 3316 1.066573 CACTCGGGTGCTGAGAATTCT 60.067 52.381 7.95 7.95 39.05 2.40
2477 3317 1.363744 CACTCGGGTGCTGAGAATTC 58.636 55.000 0.51 0.00 39.05 2.17
2478 3318 3.540211 CACTCGGGTGCTGAGAATT 57.460 52.632 0.51 0.00 39.05 2.17
2487 3327 3.000819 TGTAGGGGCACTCGGGTG 61.001 66.667 12.23 12.23 45.53 4.61
2488 3328 3.001406 GTGTAGGGGCACTCGGGT 61.001 66.667 0.00 0.00 36.51 5.28
2489 3329 3.782443 GGTGTAGGGGCACTCGGG 61.782 72.222 0.00 0.00 39.21 5.14
2490 3330 3.782443 GGGTGTAGGGGCACTCGG 61.782 72.222 0.00 0.00 39.21 4.63
2491 3331 2.683933 AGGGTGTAGGGGCACTCG 60.684 66.667 0.00 0.00 44.16 4.18
2492 3332 1.306226 AGAGGGTGTAGGGGCACTC 60.306 63.158 0.00 0.00 40.02 3.51
2493 3333 1.613630 CAGAGGGTGTAGGGGCACT 60.614 63.158 0.00 0.00 39.21 4.40
2494 3334 1.918800 ACAGAGGGTGTAGGGGCAC 60.919 63.158 0.00 0.00 37.75 5.01
2495 3335 1.918293 CACAGAGGGTGTAGGGGCA 60.918 63.158 0.00 0.00 42.75 5.36
2496 3336 2.990479 CACAGAGGGTGTAGGGGC 59.010 66.667 0.00 0.00 42.75 5.80
2503 3343 3.753294 ACTTACTGTTCACAGAGGGTG 57.247 47.619 14.00 0.00 46.59 4.61
2504 3344 6.435292 AATAACTTACTGTTCACAGAGGGT 57.565 37.500 14.00 5.94 46.59 4.34
2505 3345 7.745620 AAAATAACTTACTGTTCACAGAGGG 57.254 36.000 14.00 5.38 46.59 4.30
2536 3376 2.174639 TGATGTCCCAAAGTTGTGGACT 59.825 45.455 21.84 13.29 43.22 3.85
2537 3377 2.582052 TGATGTCCCAAAGTTGTGGAC 58.418 47.619 17.79 17.79 43.16 4.02
2538 3378 3.304911 TTGATGTCCCAAAGTTGTGGA 57.695 42.857 5.86 0.00 41.65 4.02
2539 3379 3.131933 TGTTTGATGTCCCAAAGTTGTGG 59.868 43.478 0.00 0.00 36.78 4.17
2540 3380 4.383850 TGTTTGATGTCCCAAAGTTGTG 57.616 40.909 0.00 0.00 36.78 3.33
2541 3381 4.648762 TCATGTTTGATGTCCCAAAGTTGT 59.351 37.500 0.00 0.00 36.78 3.32
2542 3382 5.199024 TCATGTTTGATGTCCCAAAGTTG 57.801 39.130 0.00 0.00 36.78 3.16
2543 3383 5.539574 TGATCATGTTTGATGTCCCAAAGTT 59.460 36.000 0.00 0.00 42.73 2.66
2544 3384 5.078949 TGATCATGTTTGATGTCCCAAAGT 58.921 37.500 0.00 0.00 42.73 2.66
2545 3385 5.648178 TGATCATGTTTGATGTCCCAAAG 57.352 39.130 0.00 0.00 42.73 2.77
2546 3386 6.041865 AGTTTGATCATGTTTGATGTCCCAAA 59.958 34.615 0.00 0.00 42.73 3.28
2547 3387 5.539574 AGTTTGATCATGTTTGATGTCCCAA 59.460 36.000 0.00 0.00 42.73 4.12
2548 3388 5.078949 AGTTTGATCATGTTTGATGTCCCA 58.921 37.500 0.00 0.00 42.73 4.37
2549 3389 5.649782 AGTTTGATCATGTTTGATGTCCC 57.350 39.130 0.00 0.00 42.73 4.46
2550 3390 7.652909 TCAAAAGTTTGATCATGTTTGATGTCC 59.347 33.333 14.61 0.00 42.73 4.02
2551 3391 8.578308 TCAAAAGTTTGATCATGTTTGATGTC 57.422 30.769 14.61 0.00 42.73 3.06
2566 3406 5.581874 ACTTTGCAAGGTCATCAAAAGTTTG 59.418 36.000 8.63 0.00 39.48 2.93
2567 3407 5.733676 ACTTTGCAAGGTCATCAAAAGTTT 58.266 33.333 8.63 0.00 30.47 2.66
2568 3408 5.343307 ACTTTGCAAGGTCATCAAAAGTT 57.657 34.783 8.63 0.00 30.47 2.66
2569 3409 5.343307 AACTTTGCAAGGTCATCAAAAGT 57.657 34.783 15.21 0.79 30.47 2.66
2570 3410 6.667007 AAAACTTTGCAAGGTCATCAAAAG 57.333 33.333 15.21 0.12 30.47 2.27
2571 3411 6.257630 GCTAAAACTTTGCAAGGTCATCAAAA 59.742 34.615 15.21 0.00 30.47 2.44
2572 3412 5.752955 GCTAAAACTTTGCAAGGTCATCAAA 59.247 36.000 15.21 0.00 0.00 2.69
2573 3413 5.068987 AGCTAAAACTTTGCAAGGTCATCAA 59.931 36.000 15.21 0.00 0.00 2.57
2574 3414 4.584325 AGCTAAAACTTTGCAAGGTCATCA 59.416 37.500 15.21 0.41 0.00 3.07
2575 3415 5.126396 AGCTAAAACTTTGCAAGGTCATC 57.874 39.130 15.21 3.43 0.00 2.92
2576 3416 6.648879 TTAGCTAAAACTTTGCAAGGTCAT 57.351 33.333 15.21 9.26 0.00 3.06
2577 3417 6.458232 TTTAGCTAAAACTTTGCAAGGTCA 57.542 33.333 16.53 2.84 0.00 4.02
2578 3418 7.764695 TTTTTAGCTAAAACTTTGCAAGGTC 57.235 32.000 27.22 1.94 35.14 3.85
2590 3430 7.536855 TCCTCAAACGTTGTTTTTAGCTAAAA 58.463 30.769 24.42 24.42 33.41 1.52
2591 3431 7.086230 TCCTCAAACGTTGTTTTTAGCTAAA 57.914 32.000 14.96 14.96 0.00 1.85
2592 3432 6.680874 TCCTCAAACGTTGTTTTTAGCTAA 57.319 33.333 0.00 0.86 0.00 3.09
2593 3433 5.277634 GCTCCTCAAACGTTGTTTTTAGCTA 60.278 40.000 0.00 0.00 0.00 3.32
2594 3434 4.497507 GCTCCTCAAACGTTGTTTTTAGCT 60.498 41.667 0.00 0.00 0.00 3.32
2595 3435 3.729217 GCTCCTCAAACGTTGTTTTTAGC 59.271 43.478 0.00 3.81 0.00 3.09
2596 3436 4.287720 GGCTCCTCAAACGTTGTTTTTAG 58.712 43.478 0.00 0.00 0.00 1.85
2597 3437 3.067040 GGGCTCCTCAAACGTTGTTTTTA 59.933 43.478 0.00 0.00 0.00 1.52
2598 3438 2.159156 GGGCTCCTCAAACGTTGTTTTT 60.159 45.455 0.00 0.00 0.00 1.94
2599 3439 1.407618 GGGCTCCTCAAACGTTGTTTT 59.592 47.619 0.00 0.00 0.00 2.43
2600 3440 1.029681 GGGCTCCTCAAACGTTGTTT 58.970 50.000 0.00 0.00 0.00 2.83
2601 3441 0.182775 AGGGCTCCTCAAACGTTGTT 59.817 50.000 0.00 0.00 0.00 2.83
2602 3442 1.837090 AGGGCTCCTCAAACGTTGT 59.163 52.632 0.00 0.00 0.00 3.32
2603 3443 4.800554 AGGGCTCCTCAAACGTTG 57.199 55.556 0.00 0.00 0.00 4.10
2676 3516 1.946768 CTTCGTGGAGCCTCACAAAAA 59.053 47.619 7.63 0.00 37.50 1.94
2677 3517 1.140052 TCTTCGTGGAGCCTCACAAAA 59.860 47.619 7.63 1.40 37.50 2.44
2678 3518 0.756294 TCTTCGTGGAGCCTCACAAA 59.244 50.000 7.63 0.00 37.50 2.83
2679 3519 0.976641 ATCTTCGTGGAGCCTCACAA 59.023 50.000 7.63 1.60 37.50 3.33
2680 3520 0.976641 AATCTTCGTGGAGCCTCACA 59.023 50.000 7.63 0.00 37.50 3.58
2681 3521 2.961526 TAATCTTCGTGGAGCCTCAC 57.038 50.000 0.00 0.00 0.00 3.51
2682 3522 4.487714 AAATAATCTTCGTGGAGCCTCA 57.512 40.909 0.00 0.00 0.00 3.86
2683 3523 5.819825 AAAAATAATCTTCGTGGAGCCTC 57.180 39.130 0.00 0.00 0.00 4.70
2702 3542 5.468072 TGTTCTTGCAAAGTTTCAGCAAAAA 59.532 32.000 12.73 5.40 46.30 1.94
2703 3543 4.993584 TGTTCTTGCAAAGTTTCAGCAAAA 59.006 33.333 12.73 8.50 46.30 2.44
2704 3544 4.564041 TGTTCTTGCAAAGTTTCAGCAAA 58.436 34.783 12.73 4.17 46.30 3.68
2705 3545 4.185467 TGTTCTTGCAAAGTTTCAGCAA 57.815 36.364 11.55 11.55 46.34 3.91
2706 3546 3.865011 TGTTCTTGCAAAGTTTCAGCA 57.135 38.095 0.00 0.00 46.34 4.41
2707 3547 4.362279 TGATGTTCTTGCAAAGTTTCAGC 58.638 39.130 0.00 0.00 46.34 4.26
2708 3548 6.890663 TTTGATGTTCTTGCAAAGTTTCAG 57.109 33.333 0.00 0.00 46.34 3.02
2709 3549 7.267128 AGATTTGATGTTCTTGCAAAGTTTCA 58.733 30.769 0.00 0.00 46.34 2.69
2710 3550 7.704789 AGATTTGATGTTCTTGCAAAGTTTC 57.295 32.000 0.00 0.00 46.34 2.78
2711 3551 8.392612 CAAAGATTTGATGTTCTTGCAAAGTTT 58.607 29.630 0.00 0.00 41.91 2.66
2712 3552 7.765360 TCAAAGATTTGATGTTCTTGCAAAGTT 59.235 29.630 0.00 0.00 42.53 2.66
2713 3553 7.267128 TCAAAGATTTGATGTTCTTGCAAAGT 58.733 30.769 0.00 0.00 42.53 2.66
2714 3554 7.703298 TCAAAGATTTGATGTTCTTGCAAAG 57.297 32.000 0.00 0.00 42.95 2.77
2759 3599 8.293867 CCCTCATGAACAGTAAATTCGTAAAAA 58.706 33.333 0.00 0.00 0.00 1.94
2764 3604 4.695455 CACCCTCATGAACAGTAAATTCGT 59.305 41.667 0.00 0.00 0.00 3.85
2766 3606 6.316390 CCTACACCCTCATGAACAGTAAATTC 59.684 42.308 0.00 0.00 0.00 2.17
2768 3608 5.339200 CCCTACACCCTCATGAACAGTAAAT 60.339 44.000 0.00 0.00 0.00 1.40
2770 3610 3.517901 CCCTACACCCTCATGAACAGTAA 59.482 47.826 0.00 0.00 0.00 2.24
2771 3611 3.104512 CCCTACACCCTCATGAACAGTA 58.895 50.000 0.00 0.00 0.00 2.74
2777 3617 1.082019 TGCCCCTACACCCTCATGA 59.918 57.895 0.00 0.00 0.00 3.07
2787 3627 3.798511 GCTCCCAGGTGCCCCTAC 61.799 72.222 0.00 0.00 39.89 3.18
2792 3632 1.377333 GTAACAGCTCCCAGGTGCC 60.377 63.158 7.11 0.00 46.94 5.01
2793 3633 0.955919 GTGTAACAGCTCCCAGGTGC 60.956 60.000 2.47 2.47 46.94 5.01
2797 3637 2.039084 AGAAAGGTGTAACAGCTCCCAG 59.961 50.000 0.00 0.00 41.59 4.45
2798 3638 2.038557 GAGAAAGGTGTAACAGCTCCCA 59.961 50.000 0.00 0.00 41.59 4.37
2801 3641 5.948992 AATTGAGAAAGGTGTAACAGCTC 57.051 39.130 0.00 0.00 41.59 4.09
2802 3642 6.769512 TCTAATTGAGAAAGGTGTAACAGCT 58.230 36.000 0.00 0.00 44.48 4.24
2803 3643 7.435068 TTCTAATTGAGAAAGGTGTAACAGC 57.565 36.000 0.00 0.00 41.39 4.40
2861 3707 3.857052 TCATCCCGTAACTGTAGCAAAG 58.143 45.455 0.00 0.00 0.00 2.77
2862 3708 3.965379 TCATCCCGTAACTGTAGCAAA 57.035 42.857 0.00 0.00 0.00 3.68
2863 3709 3.965379 TTCATCCCGTAACTGTAGCAA 57.035 42.857 0.00 0.00 0.00 3.91
2864 3710 3.259876 AGTTTCATCCCGTAACTGTAGCA 59.740 43.478 0.00 0.00 34.28 3.49
2865 3711 3.858247 AGTTTCATCCCGTAACTGTAGC 58.142 45.455 0.00 0.00 34.28 3.58
2866 3712 5.514204 CGTAAGTTTCATCCCGTAACTGTAG 59.486 44.000 0.00 0.00 35.60 2.74
2867 3713 5.401550 CGTAAGTTTCATCCCGTAACTGTA 58.598 41.667 0.00 0.00 35.60 2.74
2868 3714 4.240096 CGTAAGTTTCATCCCGTAACTGT 58.760 43.478 0.00 0.00 35.60 3.55
2869 3715 3.615496 CCGTAAGTTTCATCCCGTAACTG 59.385 47.826 0.00 0.00 35.60 3.16
2870 3716 3.511146 TCCGTAAGTTTCATCCCGTAACT 59.489 43.478 0.00 0.00 36.86 2.24
2871 3717 3.848726 TCCGTAAGTTTCATCCCGTAAC 58.151 45.455 0.00 0.00 0.00 2.50
2872 3718 4.741321 ATCCGTAAGTTTCATCCCGTAA 57.259 40.909 0.00 0.00 0.00 3.18
2873 3719 4.081531 ACAATCCGTAAGTTTCATCCCGTA 60.082 41.667 0.00 0.00 0.00 4.02
2874 3720 3.267483 CAATCCGTAAGTTTCATCCCGT 58.733 45.455 0.00 0.00 0.00 5.28
2875 3721 3.267483 ACAATCCGTAAGTTTCATCCCG 58.733 45.455 0.00 0.00 0.00 5.14
2876 3722 5.425630 ACTACAATCCGTAAGTTTCATCCC 58.574 41.667 0.00 0.00 0.00 3.85
2877 3723 6.980051 AACTACAATCCGTAAGTTTCATCC 57.020 37.500 0.00 0.00 0.00 3.51
2878 3724 8.548721 CCATAACTACAATCCGTAAGTTTCATC 58.451 37.037 0.00 0.00 0.00 2.92
2879 3725 7.497909 CCCATAACTACAATCCGTAAGTTTCAT 59.502 37.037 0.00 0.00 0.00 2.57
2880 3726 6.819649 CCCATAACTACAATCCGTAAGTTTCA 59.180 38.462 0.00 0.00 0.00 2.69
2881 3727 6.238293 GCCCATAACTACAATCCGTAAGTTTC 60.238 42.308 0.00 0.00 0.00 2.78
2882 3728 5.587443 GCCCATAACTACAATCCGTAAGTTT 59.413 40.000 0.00 0.00 0.00 2.66
2883 3729 5.104652 AGCCCATAACTACAATCCGTAAGTT 60.105 40.000 0.00 0.00 0.00 2.66
2884 3730 4.407945 AGCCCATAACTACAATCCGTAAGT 59.592 41.667 0.00 0.00 0.00 2.24
2885 3731 4.750098 CAGCCCATAACTACAATCCGTAAG 59.250 45.833 0.00 0.00 0.00 2.34
2886 3732 4.406326 TCAGCCCATAACTACAATCCGTAA 59.594 41.667 0.00 0.00 0.00 3.18
2887 3733 3.962063 TCAGCCCATAACTACAATCCGTA 59.038 43.478 0.00 0.00 0.00 4.02
2888 3734 2.769663 TCAGCCCATAACTACAATCCGT 59.230 45.455 0.00 0.00 0.00 4.69
2889 3735 3.469008 TCAGCCCATAACTACAATCCG 57.531 47.619 0.00 0.00 0.00 4.18
2890 3736 4.074970 CCATCAGCCCATAACTACAATCC 58.925 47.826 0.00 0.00 0.00 3.01
2891 3737 4.516698 CACCATCAGCCCATAACTACAATC 59.483 45.833 0.00 0.00 0.00 2.67
2892 3738 4.464008 CACCATCAGCCCATAACTACAAT 58.536 43.478 0.00 0.00 0.00 2.71
2893 3739 3.371487 CCACCATCAGCCCATAACTACAA 60.371 47.826 0.00 0.00 0.00 2.41
2894 3740 2.172505 CCACCATCAGCCCATAACTACA 59.827 50.000 0.00 0.00 0.00 2.74
2895 3741 2.851195 CCACCATCAGCCCATAACTAC 58.149 52.381 0.00 0.00 0.00 2.73
2896 3742 1.142870 GCCACCATCAGCCCATAACTA 59.857 52.381 0.00 0.00 0.00 2.24
2897 3743 0.106519 GCCACCATCAGCCCATAACT 60.107 55.000 0.00 0.00 0.00 2.24
2898 3744 1.109323 GGCCACCATCAGCCCATAAC 61.109 60.000 0.00 0.00 43.76 1.89
2899 3745 1.229927 GGCCACCATCAGCCCATAA 59.770 57.895 0.00 0.00 43.76 1.90
2900 3746 2.926250 GGCCACCATCAGCCCATA 59.074 61.111 0.00 0.00 43.76 2.74
3279 4125 0.253327 ACCTCTTCGCCCCTGATTTC 59.747 55.000 0.00 0.00 0.00 2.17
3280 4126 0.698818 AACCTCTTCGCCCCTGATTT 59.301 50.000 0.00 0.00 0.00 2.17
3281 4127 1.486726 CTAACCTCTTCGCCCCTGATT 59.513 52.381 0.00 0.00 0.00 2.57
3282 4128 1.123928 CTAACCTCTTCGCCCCTGAT 58.876 55.000 0.00 0.00 0.00 2.90
3283 4129 1.614241 GCTAACCTCTTCGCCCCTGA 61.614 60.000 0.00 0.00 0.00 3.86
3284 4130 1.153349 GCTAACCTCTTCGCCCCTG 60.153 63.158 0.00 0.00 0.00 4.45
3285 4131 2.722201 CGCTAACCTCTTCGCCCCT 61.722 63.158 0.00 0.00 0.00 4.79
3286 4132 2.202892 CGCTAACCTCTTCGCCCC 60.203 66.667 0.00 0.00 0.00 5.80
3287 4133 1.810030 CACGCTAACCTCTTCGCCC 60.810 63.158 0.00 0.00 0.00 6.13
3288 4134 1.810030 CCACGCTAACCTCTTCGCC 60.810 63.158 0.00 0.00 0.00 5.54
3289 4135 1.810030 CCCACGCTAACCTCTTCGC 60.810 63.158 0.00 0.00 0.00 4.70
3290 4136 1.153628 CCCCACGCTAACCTCTTCG 60.154 63.158 0.00 0.00 0.00 3.79
3291 4137 0.175989 CTCCCCACGCTAACCTCTTC 59.824 60.000 0.00 0.00 0.00 2.87
3292 4138 1.265454 CCTCCCCACGCTAACCTCTT 61.265 60.000 0.00 0.00 0.00 2.85
3293 4139 1.686110 CCTCCCCACGCTAACCTCT 60.686 63.158 0.00 0.00 0.00 3.69
3294 4140 1.684734 TCCTCCCCACGCTAACCTC 60.685 63.158 0.00 0.00 0.00 3.85
3295 4141 1.988406 GTCCTCCCCACGCTAACCT 60.988 63.158 0.00 0.00 0.00 3.50
3296 4142 2.288025 TGTCCTCCCCACGCTAACC 61.288 63.158 0.00 0.00 0.00 2.85
3297 4143 1.079336 GTGTCCTCCCCACGCTAAC 60.079 63.158 0.00 0.00 0.00 2.34
3298 4144 3.384348 GTGTCCTCCCCACGCTAA 58.616 61.111 0.00 0.00 0.00 3.09
3311 4157 2.202222 CGTACGGACGGACGTGTC 60.202 66.667 20.26 0.00 46.41 3.67
3319 4165 2.806856 CGGACTCCTCGTACGGACG 61.807 68.421 15.74 15.74 46.30 4.79
3320 4166 3.096791 CGGACTCCTCGTACGGAC 58.903 66.667 16.52 0.00 46.30 4.79
3324 4170 2.134346 CTAGCTACGGACTCCTCGTAC 58.866 57.143 0.00 0.00 41.38 3.67
3325 4171 1.759445 ACTAGCTACGGACTCCTCGTA 59.241 52.381 0.00 0.00 41.38 3.43
3326 4172 0.540923 ACTAGCTACGGACTCCTCGT 59.459 55.000 0.00 0.00 43.64 4.18
3327 4173 2.224018 ACTACTAGCTACGGACTCCTCG 60.224 54.545 0.00 0.00 0.00 4.63
3328 4174 3.392882 GACTACTAGCTACGGACTCCTC 58.607 54.545 0.00 0.00 0.00 3.71
3329 4175 2.104622 GGACTACTAGCTACGGACTCCT 59.895 54.545 0.00 0.00 0.00 3.69
3330 4176 2.493035 GGACTACTAGCTACGGACTCC 58.507 57.143 0.00 0.00 0.00 3.85
3331 4177 2.134346 CGGACTACTAGCTACGGACTC 58.866 57.143 0.00 0.00 0.00 3.36
3332 4178 1.484240 ACGGACTACTAGCTACGGACT 59.516 52.381 4.49 0.00 0.00 3.85
3333 4179 1.946745 ACGGACTACTAGCTACGGAC 58.053 55.000 4.49 0.00 0.00 4.79
3334 4180 3.133003 ACTTACGGACTACTAGCTACGGA 59.867 47.826 4.49 0.00 0.00 4.69
3335 4181 3.247173 CACTTACGGACTACTAGCTACGG 59.753 52.174 4.49 0.00 0.00 4.02
3336 4182 3.868077 ACACTTACGGACTACTAGCTACG 59.132 47.826 0.00 0.00 0.00 3.51
3337 4183 5.465056 CCTACACTTACGGACTACTAGCTAC 59.535 48.000 0.00 0.00 0.00 3.58
3338 4184 5.363868 TCCTACACTTACGGACTACTAGCTA 59.636 44.000 0.00 0.00 0.00 3.32
3339 4185 4.163078 TCCTACACTTACGGACTACTAGCT 59.837 45.833 0.00 0.00 0.00 3.32
3340 4186 4.446371 TCCTACACTTACGGACTACTAGC 58.554 47.826 0.00 0.00 0.00 3.42
3341 4187 7.565323 AAATCCTACACTTACGGACTACTAG 57.435 40.000 0.00 0.00 0.00 2.57
3342 4188 7.944729 AAAATCCTACACTTACGGACTACTA 57.055 36.000 0.00 0.00 0.00 1.82
3343 4189 6.847421 AAAATCCTACACTTACGGACTACT 57.153 37.500 0.00 0.00 0.00 2.57
3344 4190 7.092716 TCAAAAATCCTACACTTACGGACTAC 58.907 38.462 0.00 0.00 0.00 2.73
3345 4191 7.230849 TCAAAAATCCTACACTTACGGACTA 57.769 36.000 0.00 0.00 0.00 2.59
3346 4192 6.105397 TCAAAAATCCTACACTTACGGACT 57.895 37.500 0.00 0.00 0.00 3.85
3347 4193 6.980051 ATCAAAAATCCTACACTTACGGAC 57.020 37.500 0.00 0.00 0.00 4.79
3348 4194 6.938030 ACAATCAAAAATCCTACACTTACGGA 59.062 34.615 0.00 0.00 0.00 4.69
3349 4195 7.021196 CACAATCAAAAATCCTACACTTACGG 58.979 38.462 0.00 0.00 0.00 4.02
3350 4196 7.802738 TCACAATCAAAAATCCTACACTTACG 58.197 34.615 0.00 0.00 0.00 3.18
3351 4197 7.750903 GCTCACAATCAAAAATCCTACACTTAC 59.249 37.037 0.00 0.00 0.00 2.34
3352 4198 7.360861 CGCTCACAATCAAAAATCCTACACTTA 60.361 37.037 0.00 0.00 0.00 2.24
3353 4199 6.568462 CGCTCACAATCAAAAATCCTACACTT 60.568 38.462 0.00 0.00 0.00 3.16
3354 4200 5.106555 CGCTCACAATCAAAAATCCTACACT 60.107 40.000 0.00 0.00 0.00 3.55
3355 4201 5.088739 CGCTCACAATCAAAAATCCTACAC 58.911 41.667 0.00 0.00 0.00 2.90
3356 4202 4.155826 CCGCTCACAATCAAAAATCCTACA 59.844 41.667 0.00 0.00 0.00 2.74
3357 4203 4.156008 ACCGCTCACAATCAAAAATCCTAC 59.844 41.667 0.00 0.00 0.00 3.18
3358 4204 4.331968 ACCGCTCACAATCAAAAATCCTA 58.668 39.130 0.00 0.00 0.00 2.94
3359 4205 3.157087 ACCGCTCACAATCAAAAATCCT 58.843 40.909 0.00 0.00 0.00 3.24
3360 4206 3.575965 ACCGCTCACAATCAAAAATCC 57.424 42.857 0.00 0.00 0.00 3.01
3361 4207 4.298332 ACAACCGCTCACAATCAAAAATC 58.702 39.130 0.00 0.00 0.00 2.17
3362 4208 4.320608 ACAACCGCTCACAATCAAAAAT 57.679 36.364 0.00 0.00 0.00 1.82
3363 4209 3.791973 ACAACCGCTCACAATCAAAAA 57.208 38.095 0.00 0.00 0.00 1.94
3364 4210 3.628032 TGTACAACCGCTCACAATCAAAA 59.372 39.130 0.00 0.00 0.00 2.44
3365 4211 3.002862 GTGTACAACCGCTCACAATCAAA 59.997 43.478 0.00 0.00 0.00 2.69
3366 4212 2.546368 GTGTACAACCGCTCACAATCAA 59.454 45.455 0.00 0.00 0.00 2.57
3367 4213 2.139917 GTGTACAACCGCTCACAATCA 58.860 47.619 0.00 0.00 0.00 2.57
3368 4214 2.139917 TGTGTACAACCGCTCACAATC 58.860 47.619 0.00 0.00 37.77 2.67
3369 4215 2.248280 TGTGTACAACCGCTCACAAT 57.752 45.000 0.00 0.00 37.77 2.71
3370 4216 2.139917 GATGTGTACAACCGCTCACAA 58.860 47.619 0.00 0.00 42.61 3.33
3371 4217 1.606994 GGATGTGTACAACCGCTCACA 60.607 52.381 0.00 0.00 43.30 3.58
3372 4218 1.076332 GGATGTGTACAACCGCTCAC 58.924 55.000 0.00 0.00 0.00 3.51
3373 4219 3.525619 GGATGTGTACAACCGCTCA 57.474 52.632 0.00 0.00 0.00 4.26
3378 4224 2.028385 AGACTTCCGGATGTGTACAACC 60.028 50.000 26.24 10.73 35.68 3.77
3379 4225 2.993899 CAGACTTCCGGATGTGTACAAC 59.006 50.000 26.24 11.40 0.00 3.32
3426 4305 5.237127 AGGCAGCTGAAAAATAAAAAGTTGC 59.763 36.000 20.43 0.00 42.30 4.17
3442 4321 4.820716 AGATTTGCTATTCTTAGGCAGCTG 59.179 41.667 10.11 10.11 37.28 4.24
3443 4322 4.820716 CAGATTTGCTATTCTTAGGCAGCT 59.179 41.667 0.00 0.00 37.28 4.24
3444 4323 4.818546 TCAGATTTGCTATTCTTAGGCAGC 59.181 41.667 0.00 0.00 37.28 5.25
3445 4324 8.613060 TTATCAGATTTGCTATTCTTAGGCAG 57.387 34.615 0.00 0.00 37.28 4.85
3446 4325 8.978874 TTTATCAGATTTGCTATTCTTAGGCA 57.021 30.769 0.00 0.00 0.00 4.75
4076 5749 7.214381 TGTCAACGGATACTTTTCTATATGGG 58.786 38.462 0.00 0.00 0.00 4.00
4255 5942 1.355043 AGGAGACGGACAAGACTACCT 59.645 52.381 0.00 0.00 0.00 3.08
4318 6005 2.704572 AGGCTCTTGTTCTGCATGTAC 58.295 47.619 0.00 0.00 0.00 2.90
4343 6030 2.070783 GCGAGTACCGAAAATGTGGAA 58.929 47.619 7.77 0.00 41.76 3.53
4727 7010 2.607499 ACAATTGTTTGATCAGGCCCA 58.393 42.857 4.92 0.00 36.64 5.36
4780 7063 7.016661 TGGAGAAACAAAGATCCTAGGGATATC 59.983 40.741 9.46 4.83 43.27 1.63
4781 7064 6.851836 TGGAGAAACAAAGATCCTAGGGATAT 59.148 38.462 9.46 0.00 43.27 1.63
4785 7068 4.844349 TGGAGAAACAAAGATCCTAGGG 57.156 45.455 9.46 0.00 32.79 3.53
4786 7069 6.418101 TGAATGGAGAAACAAAGATCCTAGG 58.582 40.000 0.82 0.82 32.79 3.02
4787 7070 7.928307 TTGAATGGAGAAACAAAGATCCTAG 57.072 36.000 0.00 0.00 32.79 3.02
5074 7357 0.512518 TGTTCACGCTTGATGCTTCG 59.487 50.000 0.00 0.00 40.11 3.79
5127 7414 3.983044 AAAGGAGATTCGCCAACTACT 57.017 42.857 9.24 0.00 0.00 2.57
5293 7580 0.976641 ACATGGTCGGTCTGTCACAT 59.023 50.000 0.00 0.00 0.00 3.21
5302 7589 1.911766 AACGGAGGACATGGTCGGT 60.912 57.895 0.00 0.00 32.65 4.69
5384 7671 0.179189 GAAGGCACAAATCCTTCGCG 60.179 55.000 0.00 0.00 46.84 5.87
5573 7869 9.771534 AGACCAACATTTTTATATAGAGAGCTC 57.228 33.333 5.27 5.27 0.00 4.09
5582 7879 9.927668 CACAAGGAAAGACCAACATTTTTATAT 57.072 29.630 0.00 0.00 42.04 0.86
5594 7891 3.181434 ACATAAGCCACAAGGAAAGACCA 60.181 43.478 0.00 0.00 42.04 4.02
5645 7942 4.383774 TCGTTTTCAGAGCACAATAACG 57.616 40.909 0.00 0.00 38.46 3.18
5673 7970 4.141801 ACCCGAAGCTAGTGCATATGTTAA 60.142 41.667 4.29 0.00 42.74 2.01
5713 8010 6.882140 TGGACTTCCGAACATGTAAATGTAAT 59.118 34.615 0.00 0.00 39.43 1.89
5940 8237 5.230942 ACATTGATAGATAACCTGTAGCGC 58.769 41.667 0.00 0.00 0.00 5.92
5993 8290 2.734606 CGAACCGTGTACACAATGTCAT 59.265 45.455 24.98 5.66 0.00 3.06
5995 8292 2.396601 TCGAACCGTGTACACAATGTC 58.603 47.619 24.98 14.47 0.00 3.06
5996 8293 2.223876 ACTCGAACCGTGTACACAATGT 60.224 45.455 24.98 15.43 31.87 2.71
5997 8294 2.400399 ACTCGAACCGTGTACACAATG 58.600 47.619 24.98 14.82 31.87 2.82
6007 8333 4.125695 GCCGCCTACTCGAACCGT 62.126 66.667 0.00 0.00 0.00 4.83
6087 8421 5.211973 TCAAGACTAGATAATGCCTCAGGT 58.788 41.667 0.00 0.00 0.00 4.00
6091 8425 6.041523 AGTCCTTCAAGACTAGATAATGCCTC 59.958 42.308 0.00 0.00 45.31 4.70
6150 8485 8.650143 ACTAGGATGGACATAACAAAAACAAT 57.350 30.769 0.00 0.00 0.00 2.71
6153 8488 7.681939 TGACTAGGATGGACATAACAAAAAC 57.318 36.000 0.00 0.00 0.00 2.43
6223 8558 3.357203 TGCCAAATCTAAATTACCGCCA 58.643 40.909 0.00 0.00 0.00 5.69
6298 9013 2.150397 AGTTGACTTGTGGAGTACGC 57.850 50.000 0.00 0.00 39.19 4.42
6299 9014 4.446719 GGTAAAGTTGACTTGTGGAGTACG 59.553 45.833 0.00 0.00 39.19 3.67
6305 9020 5.961272 AGTTTTGGTAAAGTTGACTTGTGG 58.039 37.500 0.00 0.00 36.12 4.17
6322 9037 4.804108 TGTGTTGTGAAGTCCAAGTTTTG 58.196 39.130 0.00 0.00 0.00 2.44
6323 9038 4.522789 ACTGTGTTGTGAAGTCCAAGTTTT 59.477 37.500 0.00 0.00 0.00 2.43
6324 9039 4.079253 ACTGTGTTGTGAAGTCCAAGTTT 58.921 39.130 0.00 0.00 0.00 2.66
6325 9040 3.686016 ACTGTGTTGTGAAGTCCAAGTT 58.314 40.909 0.00 0.00 0.00 2.66
6326 9041 3.350219 ACTGTGTTGTGAAGTCCAAGT 57.650 42.857 0.00 0.00 0.00 3.16
6327 9042 4.442706 ACTACTGTGTTGTGAAGTCCAAG 58.557 43.478 0.00 0.00 0.00 3.61
6328 9043 4.481368 ACTACTGTGTTGTGAAGTCCAA 57.519 40.909 0.00 0.00 0.00 3.53
6329 9044 5.801531 ATACTACTGTGTTGTGAAGTCCA 57.198 39.130 0.00 0.00 0.00 4.02
6330 9045 7.277981 CCATTATACTACTGTGTTGTGAAGTCC 59.722 40.741 0.00 0.00 0.00 3.85
6331 9046 7.817962 ACCATTATACTACTGTGTTGTGAAGTC 59.182 37.037 0.00 0.00 0.00 3.01
6332 9047 7.676947 ACCATTATACTACTGTGTTGTGAAGT 58.323 34.615 0.00 0.00 0.00 3.01
6333 9048 9.084164 GTACCATTATACTACTGTGTTGTGAAG 57.916 37.037 0.00 0.00 0.00 3.02
6334 9049 8.809066 AGTACCATTATACTACTGTGTTGTGAA 58.191 33.333 0.00 0.00 33.50 3.18
6335 9050 8.248253 CAGTACCATTATACTACTGTGTTGTGA 58.752 37.037 0.00 0.00 34.90 3.58
6336 9051 7.010183 GCAGTACCATTATACTACTGTGTTGTG 59.990 40.741 6.06 0.00 39.65 3.33
6337 9052 7.039882 GCAGTACCATTATACTACTGTGTTGT 58.960 38.462 6.06 0.00 39.65 3.32
6338 9053 7.265673 AGCAGTACCATTATACTACTGTGTTG 58.734 38.462 6.06 0.00 39.65 3.33
6339 9054 7.419711 AGCAGTACCATTATACTACTGTGTT 57.580 36.000 6.06 0.00 39.65 3.32
6340 9055 8.529424 TTAGCAGTACCATTATACTACTGTGT 57.471 34.615 6.06 0.00 39.65 3.72
6341 9056 9.811995 TTTTAGCAGTACCATTATACTACTGTG 57.188 33.333 6.06 0.00 39.65 3.66
6349 9064 9.256477 CGACTGATTTTTAGCAGTACCATTATA 57.744 33.333 0.00 0.00 44.77 0.98
6350 9065 7.985184 TCGACTGATTTTTAGCAGTACCATTAT 59.015 33.333 0.00 0.00 44.77 1.28
6351 9066 7.324935 TCGACTGATTTTTAGCAGTACCATTA 58.675 34.615 0.00 0.00 44.77 1.90
6352 9067 6.170506 TCGACTGATTTTTAGCAGTACCATT 58.829 36.000 0.00 0.00 44.77 3.16
6353 9068 5.730550 TCGACTGATTTTTAGCAGTACCAT 58.269 37.500 0.00 0.00 44.77 3.55
6354 9069 5.142061 TCGACTGATTTTTAGCAGTACCA 57.858 39.130 0.00 0.00 44.77 3.25
6355 9070 6.312918 TCAATCGACTGATTTTTAGCAGTACC 59.687 38.462 0.00 0.00 44.77 3.34
6356 9071 7.275779 TCTCAATCGACTGATTTTTAGCAGTAC 59.724 37.037 0.00 0.00 44.77 2.73
6357 9072 7.320399 TCTCAATCGACTGATTTTTAGCAGTA 58.680 34.615 0.00 0.00 44.77 2.74
6359 9074 6.653273 TCTCAATCGACTGATTTTTAGCAG 57.347 37.500 0.00 0.00 42.14 4.24
6360 9075 7.615582 AATCTCAATCGACTGATTTTTAGCA 57.384 32.000 0.00 0.00 42.14 3.49
6361 9076 7.371875 CGAAATCTCAATCGACTGATTTTTAGC 59.628 37.037 0.00 0.00 42.14 3.09
6362 9077 7.371875 GCGAAATCTCAATCGACTGATTTTTAG 59.628 37.037 0.00 2.75 42.14 1.85
6363 9078 7.180079 GCGAAATCTCAATCGACTGATTTTTA 58.820 34.615 0.00 0.00 42.14 1.52
6364 9079 6.024049 GCGAAATCTCAATCGACTGATTTTT 58.976 36.000 0.00 0.44 42.14 1.94
6365 9080 5.563842 GCGAAATCTCAATCGACTGATTTT 58.436 37.500 0.00 0.82 42.14 1.82
6366 9081 4.259970 CGCGAAATCTCAATCGACTGATTT 60.260 41.667 0.00 6.73 42.14 2.17
6367 9082 3.243877 CGCGAAATCTCAATCGACTGATT 59.756 43.478 0.00 0.00 45.70 2.57
6368 9083 2.791560 CGCGAAATCTCAATCGACTGAT 59.208 45.455 0.00 0.00 41.43 2.90
6369 9084 2.159435 TCGCGAAATCTCAATCGACTGA 60.159 45.455 6.20 0.00 41.43 3.41
6370 9085 2.185262 TCGCGAAATCTCAATCGACTG 58.815 47.619 6.20 0.00 41.43 3.51
6371 9086 2.561733 TCGCGAAATCTCAATCGACT 57.438 45.000 6.20 0.00 41.43 4.18
6372 9087 2.599082 ACTTCGCGAAATCTCAATCGAC 59.401 45.455 23.54 0.00 41.43 4.20
6373 9088 2.852413 GACTTCGCGAAATCTCAATCGA 59.148 45.455 21.96 0.00 41.43 3.59
6374 9089 2.854777 AGACTTCGCGAAATCTCAATCG 59.145 45.455 25.68 11.74 41.81 3.34
6375 9090 3.859961 TGAGACTTCGCGAAATCTCAATC 59.140 43.478 43.30 27.50 43.47 2.67
6376 9091 3.849911 TGAGACTTCGCGAAATCTCAAT 58.150 40.909 43.30 21.92 43.47 2.57
6377 9092 3.245797 CTGAGACTTCGCGAAATCTCAA 58.754 45.455 43.22 32.23 45.18 3.02
6378 9093 2.229062 ACTGAGACTTCGCGAAATCTCA 59.771 45.455 42.40 42.40 44.05 3.27
6379 9094 2.849473 GACTGAGACTTCGCGAAATCTC 59.151 50.000 39.12 39.12 38.46 2.75
6380 9095 2.729467 CGACTGAGACTTCGCGAAATCT 60.729 50.000 30.55 30.55 0.00 2.40
6381 9096 1.579808 CGACTGAGACTTCGCGAAATC 59.420 52.381 21.76 21.76 0.00 2.17
6382 9097 1.199327 TCGACTGAGACTTCGCGAAAT 59.801 47.619 23.54 13.96 35.15 2.17
6383 9098 0.589708 TCGACTGAGACTTCGCGAAA 59.410 50.000 23.54 6.50 35.15 3.46
6384 9099 0.110328 GTCGACTGAGACTTCGCGAA 60.110 55.000 22.01 22.01 38.09 4.70
6385 9100 1.496393 GTCGACTGAGACTTCGCGA 59.504 57.895 3.71 3.71 38.09 5.87
6386 9101 1.859564 CGTCGACTGAGACTTCGCG 60.860 63.158 14.70 0.00 38.90 5.87
6387 9102 1.512310 CCGTCGACTGAGACTTCGC 60.512 63.158 14.70 0.00 38.90 4.70
6388 9103 1.134901 CCCGTCGACTGAGACTTCG 59.865 63.158 14.70 0.00 38.90 3.79
6389 9104 1.153997 GCCCGTCGACTGAGACTTC 60.154 63.158 14.70 0.00 38.90 3.01
6390 9105 2.637383 GGCCCGTCGACTGAGACTT 61.637 63.158 14.70 0.00 38.90 3.01
6391 9106 3.063084 GGCCCGTCGACTGAGACT 61.063 66.667 14.70 0.00 38.90 3.24
6392 9107 3.343788 CTGGCCCGTCGACTGAGAC 62.344 68.421 14.70 4.58 37.76 3.36
6393 9108 3.062466 CTGGCCCGTCGACTGAGA 61.062 66.667 14.70 0.00 0.00 3.27
6394 9109 4.803426 GCTGGCCCGTCGACTGAG 62.803 72.222 14.70 2.95 0.00 3.35
6405 9120 4.162690 AAGATCGGACGGCTGGCC 62.163 66.667 7.64 7.64 0.00 5.36
6406 9121 2.586357 GAAGATCGGACGGCTGGC 60.586 66.667 0.00 0.00 0.00 4.85
6407 9122 1.227089 CTGAAGATCGGACGGCTGG 60.227 63.158 0.00 0.00 0.00 4.85
6408 9123 1.880340 GCTGAAGATCGGACGGCTG 60.880 63.158 0.00 0.00 33.73 4.85
6409 9124 2.290122 CTGCTGAAGATCGGACGGCT 62.290 60.000 16.77 0.00 36.92 5.52
6410 9125 1.880340 CTGCTGAAGATCGGACGGC 60.880 63.158 11.65 11.65 36.58 5.68
6411 9126 1.880340 GCTGCTGAAGATCGGACGG 60.880 63.158 0.00 0.00 0.00 4.79
6412 9127 0.459237 AAGCTGCTGAAGATCGGACG 60.459 55.000 1.35 0.00 0.00 4.79
6413 9128 1.005340 CAAGCTGCTGAAGATCGGAC 58.995 55.000 1.35 0.00 0.00 4.79
6414 9129 0.610174 ACAAGCTGCTGAAGATCGGA 59.390 50.000 1.35 0.00 0.00 4.55
6415 9130 2.159184 TCTACAAGCTGCTGAAGATCGG 60.159 50.000 1.35 0.00 0.00 4.18
6416 9131 3.156511 TCTACAAGCTGCTGAAGATCG 57.843 47.619 1.35 0.00 0.00 3.69
6417 9132 5.730010 GCAAATCTACAAGCTGCTGAAGATC 60.730 44.000 17.00 6.43 0.00 2.75
6418 9133 4.096081 GCAAATCTACAAGCTGCTGAAGAT 59.904 41.667 1.35 9.21 0.00 2.40
6419 9134 3.438087 GCAAATCTACAAGCTGCTGAAGA 59.562 43.478 1.35 7.12 0.00 2.87
6420 9135 3.727079 CGCAAATCTACAAGCTGCTGAAG 60.727 47.826 1.35 1.13 0.00 3.02
6421 9136 2.160219 CGCAAATCTACAAGCTGCTGAA 59.840 45.455 1.35 0.00 0.00 3.02
6422 9137 1.733912 CGCAAATCTACAAGCTGCTGA 59.266 47.619 1.35 0.00 0.00 4.26
6423 9138 1.466167 ACGCAAATCTACAAGCTGCTG 59.534 47.619 1.35 0.00 0.00 4.41
6424 9139 1.813513 ACGCAAATCTACAAGCTGCT 58.186 45.000 0.00 0.00 0.00 4.24
6425 9140 2.245096 CAACGCAAATCTACAAGCTGC 58.755 47.619 0.00 0.00 0.00 5.25
6426 9141 2.414559 CCCAACGCAAATCTACAAGCTG 60.415 50.000 0.00 0.00 0.00 4.24
6427 9142 1.812571 CCCAACGCAAATCTACAAGCT 59.187 47.619 0.00 0.00 0.00 3.74
6428 9143 1.135402 CCCCAACGCAAATCTACAAGC 60.135 52.381 0.00 0.00 0.00 4.01
6429 9144 1.472480 CCCCCAACGCAAATCTACAAG 59.528 52.381 0.00 0.00 0.00 3.16
6430 9145 1.540267 CCCCCAACGCAAATCTACAA 58.460 50.000 0.00 0.00 0.00 2.41
6431 9146 0.963355 GCCCCCAACGCAAATCTACA 60.963 55.000 0.00 0.00 0.00 2.74
6432 9147 1.807226 GCCCCCAACGCAAATCTAC 59.193 57.895 0.00 0.00 0.00 2.59
6433 9148 1.747367 CGCCCCCAACGCAAATCTA 60.747 57.895 0.00 0.00 0.00 1.98
6434 9149 3.061848 CGCCCCCAACGCAAATCT 61.062 61.111 0.00 0.00 0.00 2.40
6441 9156 3.551887 GACAAAAGCGCCCCCAACG 62.552 63.158 2.29 0.00 0.00 4.10
6442 9157 2.338620 GACAAAAGCGCCCCCAAC 59.661 61.111 2.29 0.00 0.00 3.77
6443 9158 2.915137 GGACAAAAGCGCCCCCAA 60.915 61.111 2.29 0.00 0.00 4.12
6444 9159 3.444818 AAGGACAAAAGCGCCCCCA 62.445 57.895 2.29 0.00 0.00 4.96
6445 9160 2.600470 AAGGACAAAAGCGCCCCC 60.600 61.111 2.29 0.00 0.00 5.40
6446 9161 1.744320 AACAAGGACAAAAGCGCCCC 61.744 55.000 2.29 0.00 0.00 5.80
6447 9162 0.104120 AAACAAGGACAAAAGCGCCC 59.896 50.000 2.29 0.00 0.00 6.13
6448 9163 1.487482 GAAACAAGGACAAAAGCGCC 58.513 50.000 2.29 0.00 0.00 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.