Multiple sequence alignment - TraesCS2D01G533200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G533200 | chr2D | 100.000 | 2276 | 0 | 0 | 1 | 2276 | 617956700 | 617958975 | 0.000000e+00 | 4204.0 |
1 | TraesCS2D01G533200 | chr2D | 95.995 | 849 | 31 | 1 | 1431 | 2276 | 316324762 | 316325610 | 0.000000e+00 | 1376.0 |
2 | TraesCS2D01G533200 | chr2D | 85.773 | 731 | 67 | 21 | 709 | 1425 | 617972748 | 617973455 | 0.000000e+00 | 739.0 |
3 | TraesCS2D01G533200 | chr2D | 82.149 | 549 | 68 | 18 | 753 | 1276 | 587112087 | 587111544 | 5.770000e-121 | 444.0 |
4 | TraesCS2D01G533200 | chr1D | 97.538 | 853 | 20 | 1 | 1425 | 2276 | 29926448 | 29925596 | 0.000000e+00 | 1458.0 |
5 | TraesCS2D01G533200 | chr1D | 97.535 | 852 | 20 | 1 | 1425 | 2276 | 379471010 | 379470160 | 0.000000e+00 | 1456.0 |
6 | TraesCS2D01G533200 | chr1D | 97.048 | 847 | 22 | 2 | 1431 | 2276 | 400172752 | 400173596 | 0.000000e+00 | 1423.0 |
7 | TraesCS2D01G533200 | chr1D | 87.879 | 132 | 16 | 0 | 1 | 132 | 397639103 | 397638972 | 3.030000e-34 | 156.0 |
8 | TraesCS2D01G533200 | chr5D | 97.288 | 848 | 23 | 0 | 1429 | 2276 | 434361872 | 434361025 | 0.000000e+00 | 1439.0 |
9 | TraesCS2D01G533200 | chr5D | 80.282 | 213 | 34 | 5 | 4 | 215 | 524497819 | 524497614 | 1.090000e-33 | 154.0 |
10 | TraesCS2D01G533200 | chr3D | 97.294 | 850 | 20 | 3 | 1428 | 2276 | 15326117 | 15325270 | 0.000000e+00 | 1439.0 |
11 | TraesCS2D01G533200 | chr3D | 81.702 | 235 | 31 | 6 | 1 | 228 | 161718297 | 161718526 | 3.860000e-43 | 185.0 |
12 | TraesCS2D01G533200 | chr7D | 96.213 | 845 | 31 | 1 | 1432 | 2276 | 383280833 | 383279990 | 0.000000e+00 | 1382.0 |
13 | TraesCS2D01G533200 | chr7D | 96.009 | 852 | 30 | 2 | 1428 | 2276 | 517344040 | 517344890 | 0.000000e+00 | 1382.0 |
14 | TraesCS2D01G533200 | chr7D | 85.034 | 147 | 21 | 1 | 2 | 148 | 576893346 | 576893201 | 5.070000e-32 | 148.0 |
15 | TraesCS2D01G533200 | chr7D | 87.387 | 111 | 14 | 0 | 1 | 111 | 607305138 | 607305248 | 6.600000e-26 | 128.0 |
16 | TraesCS2D01G533200 | chr7A | 92.335 | 848 | 60 | 4 | 1430 | 2276 | 210691491 | 210690648 | 0.000000e+00 | 1201.0 |
17 | TraesCS2D01G533200 | chr2B | 89.804 | 510 | 34 | 10 | 807 | 1302 | 753952269 | 753952774 | 2.470000e-179 | 638.0 |
18 | TraesCS2D01G533200 | chr2B | 83.526 | 607 | 54 | 28 | 709 | 1302 | 754001020 | 754001593 | 2.000000e-145 | 525.0 |
19 | TraesCS2D01G533200 | chr2B | 83.394 | 548 | 61 | 22 | 753 | 1276 | 708863536 | 708862995 | 4.400000e-132 | 481.0 |
20 | TraesCS2D01G533200 | chr2B | 92.256 | 297 | 19 | 2 | 994 | 1289 | 753986889 | 753987182 | 3.500000e-113 | 418.0 |
21 | TraesCS2D01G533200 | chr2B | 89.825 | 285 | 23 | 3 | 992 | 1276 | 753974082 | 753974360 | 5.980000e-96 | 361.0 |
22 | TraesCS2D01G533200 | chr2B | 89.691 | 97 | 9 | 1 | 1330 | 1425 | 753952765 | 753952861 | 3.070000e-24 | 122.0 |
23 | TraesCS2D01G533200 | chr2A | 82.857 | 595 | 67 | 23 | 709 | 1289 | 748537571 | 748538144 | 3.380000e-138 | 501.0 |
24 | TraesCS2D01G533200 | chr2A | 90.278 | 288 | 24 | 3 | 981 | 1268 | 748528057 | 748528340 | 7.680000e-100 | 374.0 |
25 | TraesCS2D01G533200 | chr2A | 95.455 | 44 | 2 | 0 | 1333 | 1376 | 748533778 | 748533821 | 1.130000e-08 | 71.3 |
26 | TraesCS2D01G533200 | chr3A | 83.628 | 226 | 32 | 2 | 1 | 226 | 16154424 | 16154644 | 8.240000e-50 | 207.0 |
27 | TraesCS2D01G533200 | chr6A | 81.857 | 237 | 35 | 5 | 1 | 235 | 535980836 | 535981066 | 2.310000e-45 | 193.0 |
28 | TraesCS2D01G533200 | chr1B | 81.116 | 233 | 35 | 6 | 1 | 231 | 431405211 | 431404986 | 6.460000e-41 | 178.0 |
29 | TraesCS2D01G533200 | chr5A | 81.081 | 148 | 27 | 1 | 1 | 148 | 311278521 | 311278375 | 1.430000e-22 | 117.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G533200 | chr2D | 617956700 | 617958975 | 2275 | False | 4204.00 | 4204 | 100.0000 | 1 | 2276 | 1 | chr2D.!!$F2 | 2275 |
1 | TraesCS2D01G533200 | chr2D | 316324762 | 316325610 | 848 | False | 1376.00 | 1376 | 95.9950 | 1431 | 2276 | 1 | chr2D.!!$F1 | 845 |
2 | TraesCS2D01G533200 | chr2D | 617972748 | 617973455 | 707 | False | 739.00 | 739 | 85.7730 | 709 | 1425 | 1 | chr2D.!!$F3 | 716 |
3 | TraesCS2D01G533200 | chr2D | 587111544 | 587112087 | 543 | True | 444.00 | 444 | 82.1490 | 753 | 1276 | 1 | chr2D.!!$R1 | 523 |
4 | TraesCS2D01G533200 | chr1D | 29925596 | 29926448 | 852 | True | 1458.00 | 1458 | 97.5380 | 1425 | 2276 | 1 | chr1D.!!$R1 | 851 |
5 | TraesCS2D01G533200 | chr1D | 379470160 | 379471010 | 850 | True | 1456.00 | 1456 | 97.5350 | 1425 | 2276 | 1 | chr1D.!!$R2 | 851 |
6 | TraesCS2D01G533200 | chr1D | 400172752 | 400173596 | 844 | False | 1423.00 | 1423 | 97.0480 | 1431 | 2276 | 1 | chr1D.!!$F1 | 845 |
7 | TraesCS2D01G533200 | chr5D | 434361025 | 434361872 | 847 | True | 1439.00 | 1439 | 97.2880 | 1429 | 2276 | 1 | chr5D.!!$R1 | 847 |
8 | TraesCS2D01G533200 | chr3D | 15325270 | 15326117 | 847 | True | 1439.00 | 1439 | 97.2940 | 1428 | 2276 | 1 | chr3D.!!$R1 | 848 |
9 | TraesCS2D01G533200 | chr7D | 383279990 | 383280833 | 843 | True | 1382.00 | 1382 | 96.2130 | 1432 | 2276 | 1 | chr7D.!!$R1 | 844 |
10 | TraesCS2D01G533200 | chr7D | 517344040 | 517344890 | 850 | False | 1382.00 | 1382 | 96.0090 | 1428 | 2276 | 1 | chr7D.!!$F1 | 848 |
11 | TraesCS2D01G533200 | chr7A | 210690648 | 210691491 | 843 | True | 1201.00 | 1201 | 92.3350 | 1430 | 2276 | 1 | chr7A.!!$R1 | 846 |
12 | TraesCS2D01G533200 | chr2B | 754001020 | 754001593 | 573 | False | 525.00 | 525 | 83.5260 | 709 | 1302 | 1 | chr2B.!!$F3 | 593 |
13 | TraesCS2D01G533200 | chr2B | 708862995 | 708863536 | 541 | True | 481.00 | 481 | 83.3940 | 753 | 1276 | 1 | chr2B.!!$R1 | 523 |
14 | TraesCS2D01G533200 | chr2B | 753952269 | 753952861 | 592 | False | 380.00 | 638 | 89.7475 | 807 | 1425 | 2 | chr2B.!!$F4 | 618 |
15 | TraesCS2D01G533200 | chr2A | 748533778 | 748538144 | 4366 | False | 286.15 | 501 | 89.1560 | 709 | 1376 | 2 | chr2A.!!$F2 | 667 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
559 | 560 | 0.034198 | TTGCACACTTAGCTACGCCA | 59.966 | 50.0 | 0.0 | 0.0 | 0.0 | 5.69 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1798 | 4973 | 1.267121 | GAGGAGGTAGTTGTCTGGCA | 58.733 | 55.0 | 0.0 | 0.0 | 0.0 | 4.92 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
20 | 21 | 3.955887 | GACAAACTCGAAGAAGTAGCG | 57.044 | 47.619 | 0.00 | 0.00 | 34.09 | 4.26 |
21 | 22 | 2.059541 | ACAAACTCGAAGAAGTAGCGC | 58.940 | 47.619 | 0.00 | 0.00 | 34.09 | 5.92 |
23 | 24 | 0.456312 | AACTCGAAGAAGTAGCGCGG | 60.456 | 55.000 | 8.83 | 0.00 | 34.09 | 6.46 |
24 | 25 | 1.136984 | CTCGAAGAAGTAGCGCGGT | 59.863 | 57.895 | 17.70 | 17.70 | 34.09 | 5.68 |
25 | 26 | 0.862283 | CTCGAAGAAGTAGCGCGGTC | 60.862 | 60.000 | 16.92 | 6.88 | 34.09 | 4.79 |
26 | 27 | 1.154093 | CGAAGAAGTAGCGCGGTCA | 60.154 | 57.895 | 16.92 | 0.00 | 0.00 | 4.02 |
27 | 28 | 0.525668 | CGAAGAAGTAGCGCGGTCAT | 60.526 | 55.000 | 16.92 | 0.55 | 0.00 | 3.06 |
28 | 29 | 1.201343 | GAAGAAGTAGCGCGGTCATC | 58.799 | 55.000 | 16.92 | 11.98 | 0.00 | 2.92 |
48 | 49 | 4.814294 | CCCGAGCACCGCACCTAC | 62.814 | 72.222 | 0.00 | 0.00 | 36.84 | 3.18 |
50 | 51 | 4.111016 | CGAGCACCGCACCTACGA | 62.111 | 66.667 | 0.00 | 0.00 | 34.06 | 3.43 |
51 | 52 | 2.202623 | GAGCACCGCACCTACGAG | 60.203 | 66.667 | 0.00 | 0.00 | 34.06 | 4.18 |
52 | 53 | 3.701604 | GAGCACCGCACCTACGAGG | 62.702 | 68.421 | 0.00 | 0.00 | 42.49 | 4.63 |
54 | 55 | 2.181021 | CACCGCACCTACGAGGAC | 59.819 | 66.667 | 7.76 | 0.05 | 37.67 | 3.85 |
55 | 56 | 2.035312 | ACCGCACCTACGAGGACT | 59.965 | 61.111 | 7.76 | 0.00 | 37.67 | 3.85 |
56 | 57 | 2.341101 | ACCGCACCTACGAGGACTG | 61.341 | 63.158 | 7.76 | 0.00 | 37.67 | 3.51 |
57 | 58 | 2.044555 | CCGCACCTACGAGGACTGA | 61.045 | 63.158 | 7.76 | 0.00 | 37.67 | 3.41 |
58 | 59 | 1.592400 | CCGCACCTACGAGGACTGAA | 61.592 | 60.000 | 7.76 | 0.00 | 37.67 | 3.02 |
59 | 60 | 0.242825 | CGCACCTACGAGGACTGAAA | 59.757 | 55.000 | 7.76 | 0.00 | 37.67 | 2.69 |
60 | 61 | 1.336517 | CGCACCTACGAGGACTGAAAA | 60.337 | 52.381 | 7.76 | 0.00 | 37.67 | 2.29 |
61 | 62 | 2.762745 | GCACCTACGAGGACTGAAAAA | 58.237 | 47.619 | 7.76 | 0.00 | 37.67 | 1.94 |
84 | 85 | 9.565090 | AAAAACCTAACCTAAACTACTAACTGG | 57.435 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
85 | 86 | 8.496534 | AAACCTAACCTAAACTACTAACTGGA | 57.503 | 34.615 | 0.00 | 0.00 | 0.00 | 3.86 |
86 | 87 | 7.715266 | ACCTAACCTAAACTACTAACTGGAG | 57.285 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
88 | 89 | 4.715527 | ACCTAAACTACTAACTGGAGCG | 57.284 | 45.455 | 0.00 | 0.00 | 0.00 | 5.03 |
90 | 91 | 3.698040 | CCTAAACTACTAACTGGAGCGGA | 59.302 | 47.826 | 0.00 | 0.00 | 0.00 | 5.54 |
91 | 92 | 3.870633 | AAACTACTAACTGGAGCGGAG | 57.129 | 47.619 | 0.00 | 0.00 | 0.00 | 4.63 |
93 | 94 | 0.386113 | CTACTAACTGGAGCGGAGGC | 59.614 | 60.000 | 0.00 | 0.00 | 40.37 | 4.70 |
95 | 96 | 1.153549 | CTAACTGGAGCGGAGGCAC | 60.154 | 63.158 | 0.00 | 0.00 | 43.41 | 5.01 |
105 | 106 | 2.124278 | GGAGGCACCGGAATTCCC | 60.124 | 66.667 | 19.01 | 4.42 | 0.00 | 3.97 |
106 | 107 | 2.124278 | GAGGCACCGGAATTCCCC | 60.124 | 66.667 | 19.01 | 13.55 | 0.00 | 4.81 |
107 | 108 | 2.614013 | AGGCACCGGAATTCCCCT | 60.614 | 61.111 | 19.01 | 15.60 | 0.00 | 4.79 |
108 | 109 | 2.124278 | GGCACCGGAATTCCCCTC | 60.124 | 66.667 | 19.01 | 5.62 | 0.00 | 4.30 |
109 | 110 | 2.124278 | GCACCGGAATTCCCCTCC | 60.124 | 66.667 | 19.01 | 1.73 | 0.00 | 4.30 |
110 | 111 | 2.595655 | CACCGGAATTCCCCTCCC | 59.404 | 66.667 | 19.01 | 0.00 | 0.00 | 4.30 |
111 | 112 | 2.694992 | ACCGGAATTCCCCTCCCC | 60.695 | 66.667 | 19.01 | 0.00 | 0.00 | 4.81 |
113 | 114 | 3.087906 | CGGAATTCCCCTCCCCGT | 61.088 | 66.667 | 19.01 | 0.00 | 35.83 | 5.28 |
116 | 117 | 1.223763 | GAATTCCCCTCCCCGTCAC | 59.776 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
117 | 118 | 1.229853 | AATTCCCCTCCCCGTCACT | 60.230 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
118 | 119 | 1.562672 | AATTCCCCTCCCCGTCACTG | 61.563 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
119 | 120 | 4.715130 | TCCCCTCCCCGTCACTGG | 62.715 | 72.222 | 0.00 | 0.00 | 0.00 | 4.00 |
140 | 141 | 2.755929 | GCCAGAGCGGTAAACAGAG | 58.244 | 57.895 | 0.00 | 0.00 | 36.97 | 3.35 |
141 | 142 | 0.741221 | GCCAGAGCGGTAAACAGAGG | 60.741 | 60.000 | 0.00 | 0.00 | 36.97 | 3.69 |
142 | 143 | 0.108138 | CCAGAGCGGTAAACAGAGGG | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
144 | 145 | 1.221021 | GAGCGGTAAACAGAGGGGG | 59.779 | 63.158 | 0.00 | 0.00 | 0.00 | 5.40 |
145 | 146 | 1.229400 | AGCGGTAAACAGAGGGGGA | 60.229 | 57.895 | 0.00 | 0.00 | 0.00 | 4.81 |
146 | 147 | 1.221021 | GCGGTAAACAGAGGGGGAG | 59.779 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
147 | 148 | 1.905512 | CGGTAAACAGAGGGGGAGG | 59.094 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
148 | 149 | 1.623542 | CGGTAAACAGAGGGGGAGGG | 61.624 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
149 | 150 | 1.279749 | GGTAAACAGAGGGGGAGGGG | 61.280 | 65.000 | 0.00 | 0.00 | 0.00 | 4.79 |
150 | 151 | 1.084084 | TAAACAGAGGGGGAGGGGG | 59.916 | 63.158 | 0.00 | 0.00 | 0.00 | 5.40 |
165 | 166 | 4.796495 | GGGGCGAATCAACGGGCT | 62.796 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
166 | 167 | 3.202706 | GGGCGAATCAACGGGCTC | 61.203 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
167 | 168 | 3.564027 | GGCGAATCAACGGGCTCG | 61.564 | 66.667 | 3.27 | 3.27 | 43.02 | 5.03 |
179 | 180 | 2.200337 | GGGCTCGTGGGCAAAGTTT | 61.200 | 57.895 | 0.00 | 0.00 | 42.84 | 2.66 |
181 | 182 | 1.452145 | GGCTCGTGGGCAAAGTTTCA | 61.452 | 55.000 | 0.00 | 0.00 | 40.53 | 2.69 |
182 | 183 | 0.383949 | GCTCGTGGGCAAAGTTTCAA | 59.616 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
183 | 184 | 1.600413 | GCTCGTGGGCAAAGTTTCAAG | 60.600 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
185 | 186 | 1.946768 | TCGTGGGCAAAGTTTCAAGAG | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 2.85 |
186 | 187 | 1.946768 | CGTGGGCAAAGTTTCAAGAGA | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 3.10 |
187 | 188 | 2.357637 | CGTGGGCAAAGTTTCAAGAGAA | 59.642 | 45.455 | 0.00 | 0.00 | 0.00 | 2.87 |
188 | 189 | 3.181491 | CGTGGGCAAAGTTTCAAGAGAAA | 60.181 | 43.478 | 0.00 | 0.00 | 41.26 | 2.52 |
194 | 195 | 6.183360 | GGGCAAAGTTTCAAGAGAAAAGTTTG | 60.183 | 38.462 | 18.01 | 18.01 | 44.75 | 2.93 |
196 | 197 | 6.765089 | CAAAGTTTCAAGAGAAAAGTTTGCC | 58.235 | 36.000 | 13.04 | 0.00 | 44.75 | 4.52 |
200 | 201 | 6.039829 | AGTTTCAAGAGAAAAGTTTGCCCTAG | 59.960 | 38.462 | 0.00 | 0.00 | 44.75 | 3.02 |
201 | 202 | 5.304686 | TCAAGAGAAAAGTTTGCCCTAGA | 57.695 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
203 | 204 | 3.665190 | AGAGAAAAGTTTGCCCTAGACG | 58.335 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
205 | 206 | 1.199327 | GAAAAGTTTGCCCTAGACGCC | 59.801 | 52.381 | 0.00 | 0.00 | 0.00 | 5.68 |
207 | 208 | 1.272807 | AAGTTTGCCCTAGACGCCTA | 58.727 | 50.000 | 0.00 | 0.00 | 0.00 | 3.93 |
208 | 209 | 0.824759 | AGTTTGCCCTAGACGCCTAG | 59.175 | 55.000 | 0.00 | 0.00 | 41.58 | 3.02 |
216 | 217 | 1.618487 | CTAGACGCCTAGGGTTAGGG | 58.382 | 60.000 | 11.72 | 0.00 | 45.66 | 3.53 |
217 | 218 | 1.144503 | CTAGACGCCTAGGGTTAGGGA | 59.855 | 57.143 | 11.72 | 0.00 | 45.66 | 4.20 |
218 | 219 | 0.337428 | AGACGCCTAGGGTTAGGGAA | 59.663 | 55.000 | 11.72 | 0.00 | 45.66 | 3.97 |
221 | 222 | 0.398098 | CGCCTAGGGTTAGGGAAGGA | 60.398 | 60.000 | 11.72 | 0.00 | 45.66 | 3.36 |
222 | 223 | 1.889174 | GCCTAGGGTTAGGGAAGGAA | 58.111 | 55.000 | 11.72 | 0.00 | 45.66 | 3.36 |
223 | 224 | 2.202707 | GCCTAGGGTTAGGGAAGGAAA | 58.797 | 52.381 | 11.72 | 0.00 | 45.66 | 3.13 |
224 | 225 | 2.579400 | GCCTAGGGTTAGGGAAGGAAAA | 59.421 | 50.000 | 11.72 | 0.00 | 45.66 | 2.29 |
225 | 226 | 3.624205 | GCCTAGGGTTAGGGAAGGAAAAC | 60.624 | 52.174 | 11.72 | 0.00 | 45.66 | 2.43 |
226 | 227 | 2.873094 | AGGGTTAGGGAAGGAAAACG | 57.127 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
227 | 228 | 2.341695 | AGGGTTAGGGAAGGAAAACGA | 58.658 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
229 | 230 | 2.303890 | GGGTTAGGGAAGGAAAACGAGA | 59.696 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
230 | 231 | 3.244665 | GGGTTAGGGAAGGAAAACGAGAA | 60.245 | 47.826 | 0.00 | 0.00 | 0.00 | 2.87 |
232 | 233 | 4.262765 | GGTTAGGGAAGGAAAACGAGAAGA | 60.263 | 45.833 | 0.00 | 0.00 | 0.00 | 2.87 |
234 | 235 | 4.009370 | AGGGAAGGAAAACGAGAAGAAG | 57.991 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
235 | 236 | 2.484651 | GGGAAGGAAAACGAGAAGAAGC | 59.515 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
236 | 237 | 2.484651 | GGAAGGAAAACGAGAAGAAGCC | 59.515 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
237 | 238 | 1.797025 | AGGAAAACGAGAAGAAGCCG | 58.203 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
238 | 239 | 0.796927 | GGAAAACGAGAAGAAGCCGG | 59.203 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
239 | 240 | 0.796927 | GAAAACGAGAAGAAGCCGGG | 59.203 | 55.000 | 2.18 | 0.00 | 0.00 | 5.73 |
240 | 241 | 0.395312 | AAAACGAGAAGAAGCCGGGA | 59.605 | 50.000 | 2.18 | 0.00 | 0.00 | 5.14 |
242 | 243 | 0.613777 | AACGAGAAGAAGCCGGGAAT | 59.386 | 50.000 | 2.18 | 0.00 | 0.00 | 3.01 |
243 | 244 | 0.613777 | ACGAGAAGAAGCCGGGAATT | 59.386 | 50.000 | 2.18 | 0.00 | 0.00 | 2.17 |
244 | 245 | 1.003233 | ACGAGAAGAAGCCGGGAATTT | 59.997 | 47.619 | 2.18 | 0.00 | 0.00 | 1.82 |
245 | 246 | 1.398390 | CGAGAAGAAGCCGGGAATTTG | 59.602 | 52.381 | 2.18 | 0.00 | 0.00 | 2.32 |
247 | 248 | 3.606687 | GAGAAGAAGCCGGGAATTTGTA | 58.393 | 45.455 | 2.18 | 0.00 | 0.00 | 2.41 |
249 | 250 | 4.010349 | AGAAGAAGCCGGGAATTTGTAAG | 58.990 | 43.478 | 2.18 | 0.00 | 0.00 | 2.34 |
250 | 251 | 3.434940 | AGAAGCCGGGAATTTGTAAGT | 57.565 | 42.857 | 2.18 | 0.00 | 0.00 | 2.24 |
251 | 252 | 3.344515 | AGAAGCCGGGAATTTGTAAGTC | 58.655 | 45.455 | 2.18 | 0.00 | 0.00 | 3.01 |
252 | 253 | 3.009143 | AGAAGCCGGGAATTTGTAAGTCT | 59.991 | 43.478 | 2.18 | 0.00 | 0.00 | 3.24 |
253 | 254 | 4.224370 | AGAAGCCGGGAATTTGTAAGTCTA | 59.776 | 41.667 | 2.18 | 0.00 | 0.00 | 2.59 |
254 | 255 | 4.772886 | AGCCGGGAATTTGTAAGTCTAT | 57.227 | 40.909 | 2.18 | 0.00 | 0.00 | 1.98 |
255 | 256 | 5.881923 | AGCCGGGAATTTGTAAGTCTATA | 57.118 | 39.130 | 2.18 | 0.00 | 0.00 | 1.31 |
256 | 257 | 6.243216 | AGCCGGGAATTTGTAAGTCTATAA | 57.757 | 37.500 | 2.18 | 0.00 | 0.00 | 0.98 |
257 | 258 | 6.655930 | AGCCGGGAATTTGTAAGTCTATAAA | 58.344 | 36.000 | 2.18 | 0.00 | 0.00 | 1.40 |
261 | 262 | 9.550406 | CCGGGAATTTGTAAGTCTATAAACATA | 57.450 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
279 | 280 | 7.745620 | AAACATAACTTCGGAAATGAAGAGT | 57.254 | 32.000 | 10.22 | 1.21 | 46.64 | 3.24 |
280 | 281 | 7.745620 | AACATAACTTCGGAAATGAAGAGTT | 57.254 | 32.000 | 10.22 | 1.99 | 46.64 | 3.01 |
283 | 284 | 7.876068 | ACATAACTTCGGAAATGAAGAGTTACA | 59.124 | 33.333 | 10.22 | 0.00 | 46.64 | 2.41 |
284 | 285 | 8.717821 | CATAACTTCGGAAATGAAGAGTTACAA | 58.282 | 33.333 | 10.22 | 0.00 | 46.64 | 2.41 |
285 | 286 | 6.787085 | ACTTCGGAAATGAAGAGTTACAAG | 57.213 | 37.500 | 10.22 | 0.00 | 46.64 | 3.16 |
286 | 287 | 6.522054 | ACTTCGGAAATGAAGAGTTACAAGA | 58.478 | 36.000 | 10.22 | 0.00 | 46.64 | 3.02 |
287 | 288 | 6.990349 | ACTTCGGAAATGAAGAGTTACAAGAA | 59.010 | 34.615 | 10.22 | 0.00 | 46.64 | 2.52 |
288 | 289 | 7.497909 | ACTTCGGAAATGAAGAGTTACAAGAAA | 59.502 | 33.333 | 10.22 | 0.00 | 46.64 | 2.52 |
289 | 290 | 7.795482 | TCGGAAATGAAGAGTTACAAGAAAA | 57.205 | 32.000 | 0.00 | 0.00 | 0.00 | 2.29 |
290 | 291 | 8.391075 | TCGGAAATGAAGAGTTACAAGAAAAT | 57.609 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
292 | 293 | 9.463443 | CGGAAATGAAGAGTTACAAGAAAATTT | 57.537 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
369 | 370 | 9.898152 | AAACAAAGGGAATTTTAAATGTGAAGA | 57.102 | 25.926 | 0.00 | 0.00 | 0.00 | 2.87 |
371 | 372 | 9.325198 | ACAAAGGGAATTTTAAATGTGAAGAAC | 57.675 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
372 | 373 | 9.546428 | CAAAGGGAATTTTAAATGTGAAGAACT | 57.454 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
373 | 374 | 9.546428 | AAAGGGAATTTTAAATGTGAAGAACTG | 57.454 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
374 | 375 | 8.477419 | AGGGAATTTTAAATGTGAAGAACTGA | 57.523 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
375 | 376 | 8.579863 | AGGGAATTTTAAATGTGAAGAACTGAG | 58.420 | 33.333 | 0.00 | 0.00 | 0.00 | 3.35 |
376 | 377 | 8.576442 | GGGAATTTTAAATGTGAAGAACTGAGA | 58.424 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
383 | 384 | 6.814506 | AATGTGAAGAACTGAGATTTGAGG | 57.185 | 37.500 | 0.00 | 0.00 | 0.00 | 3.86 |
384 | 385 | 5.551305 | TGTGAAGAACTGAGATTTGAGGA | 57.449 | 39.130 | 0.00 | 0.00 | 0.00 | 3.71 |
387 | 388 | 7.000472 | TGTGAAGAACTGAGATTTGAGGAAAT | 59.000 | 34.615 | 0.00 | 0.00 | 34.29 | 2.17 |
388 | 389 | 8.156820 | TGTGAAGAACTGAGATTTGAGGAAATA | 58.843 | 33.333 | 0.00 | 0.00 | 31.58 | 1.40 |
389 | 390 | 9.003658 | GTGAAGAACTGAGATTTGAGGAAATAA | 57.996 | 33.333 | 0.00 | 0.00 | 31.58 | 1.40 |
390 | 391 | 9.573166 | TGAAGAACTGAGATTTGAGGAAATAAA | 57.427 | 29.630 | 0.00 | 0.00 | 31.58 | 1.40 |
393 | 394 | 9.525826 | AGAACTGAGATTTGAGGAAATAAATGT | 57.474 | 29.630 | 0.00 | 0.00 | 31.58 | 2.71 |
458 | 459 | 8.169977 | TGATAGCTATCCAATTTCACATTTCC | 57.830 | 34.615 | 27.08 | 1.34 | 31.71 | 3.13 |
460 | 461 | 9.507329 | GATAGCTATCCAATTTCACATTTCCTA | 57.493 | 33.333 | 21.18 | 0.00 | 0.00 | 2.94 |
520 | 521 | 9.942526 | AGTATTTTCATTTCCCCATTCTATTCT | 57.057 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
523 | 524 | 8.434589 | TTTTCATTTCCCCATTCTATTCTTGT | 57.565 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
524 | 525 | 8.434589 | TTTCATTTCCCCATTCTATTCTTGTT | 57.565 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
525 | 526 | 7.645058 | TCATTTCCCCATTCTATTCTTGTTC | 57.355 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
526 | 527 | 6.607198 | TCATTTCCCCATTCTATTCTTGTTCC | 59.393 | 38.462 | 0.00 | 0.00 | 0.00 | 3.62 |
527 | 528 | 5.796502 | TTCCCCATTCTATTCTTGTTCCT | 57.203 | 39.130 | 0.00 | 0.00 | 0.00 | 3.36 |
528 | 529 | 5.796502 | TCCCCATTCTATTCTTGTTCCTT | 57.203 | 39.130 | 0.00 | 0.00 | 0.00 | 3.36 |
529 | 530 | 6.152638 | TCCCCATTCTATTCTTGTTCCTTT | 57.847 | 37.500 | 0.00 | 0.00 | 0.00 | 3.11 |
530 | 531 | 6.561294 | TCCCCATTCTATTCTTGTTCCTTTT | 58.439 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
531 | 532 | 6.663523 | TCCCCATTCTATTCTTGTTCCTTTTC | 59.336 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
532 | 533 | 6.437162 | CCCCATTCTATTCTTGTTCCTTTTCA | 59.563 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
533 | 534 | 7.039082 | CCCCATTCTATTCTTGTTCCTTTTCAA | 60.039 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
534 | 535 | 7.814587 | CCCATTCTATTCTTGTTCCTTTTCAAC | 59.185 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
535 | 536 | 8.579863 | CCATTCTATTCTTGTTCCTTTTCAACT | 58.420 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
536 | 537 | 9.971922 | CATTCTATTCTTGTTCCTTTTCAACTT | 57.028 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
543 | 544 | 8.419076 | TCTTGTTCCTTTTCAACTTTATTTGC | 57.581 | 30.769 | 0.00 | 0.00 | 0.00 | 3.68 |
544 | 545 | 8.037758 | TCTTGTTCCTTTTCAACTTTATTTGCA | 58.962 | 29.630 | 0.00 | 0.00 | 0.00 | 4.08 |
545 | 546 | 7.532682 | TGTTCCTTTTCAACTTTATTTGCAC | 57.467 | 32.000 | 0.00 | 0.00 | 0.00 | 4.57 |
546 | 547 | 7.099764 | TGTTCCTTTTCAACTTTATTTGCACA | 58.900 | 30.769 | 0.00 | 0.00 | 0.00 | 4.57 |
547 | 548 | 7.064016 | TGTTCCTTTTCAACTTTATTTGCACAC | 59.936 | 33.333 | 0.00 | 0.00 | 0.00 | 3.82 |
550 | 551 | 8.470805 | TCCTTTTCAACTTTATTTGCACACTTA | 58.529 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
551 | 552 | 8.755018 | CCTTTTCAACTTTATTTGCACACTTAG | 58.245 | 33.333 | 0.00 | 0.00 | 0.00 | 2.18 |
552 | 553 | 7.692908 | TTTCAACTTTATTTGCACACTTAGC | 57.307 | 32.000 | 0.00 | 0.00 | 0.00 | 3.09 |
553 | 554 | 6.633500 | TCAACTTTATTTGCACACTTAGCT | 57.367 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
554 | 555 | 7.737972 | TCAACTTTATTTGCACACTTAGCTA | 57.262 | 32.000 | 0.00 | 0.00 | 0.00 | 3.32 |
555 | 556 | 7.581476 | TCAACTTTATTTGCACACTTAGCTAC | 58.419 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
556 | 557 | 6.165659 | ACTTTATTTGCACACTTAGCTACG | 57.834 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
557 | 558 | 4.593597 | TTATTTGCACACTTAGCTACGC | 57.406 | 40.909 | 0.00 | 0.00 | 0.00 | 4.42 |
559 | 560 | 0.034198 | TTGCACACTTAGCTACGCCA | 59.966 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
561 | 562 | 0.652592 | GCACACTTAGCTACGCCATG | 59.347 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
562 | 563 | 2.007049 | GCACACTTAGCTACGCCATGT | 61.007 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
564 | 565 | 0.652592 | CACTTAGCTACGCCATGTGC | 59.347 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
565 | 566 | 0.249120 | ACTTAGCTACGCCATGTGCA | 59.751 | 50.000 | 0.00 | 0.00 | 41.33 | 4.57 |
566 | 567 | 1.338674 | ACTTAGCTACGCCATGTGCAA | 60.339 | 47.619 | 0.00 | 0.00 | 41.33 | 4.08 |
568 | 569 | 1.814793 | TAGCTACGCCATGTGCAAAA | 58.185 | 45.000 | 0.00 | 0.00 | 41.33 | 2.44 |
569 | 570 | 0.240945 | AGCTACGCCATGTGCAAAAC | 59.759 | 50.000 | 0.00 | 0.00 | 41.33 | 2.43 |
572 | 573 | 0.312416 | TACGCCATGTGCAAAACCAC | 59.688 | 50.000 | 0.00 | 0.00 | 41.33 | 4.16 |
573 | 574 | 1.664333 | CGCCATGTGCAAAACCACC | 60.664 | 57.895 | 0.00 | 0.00 | 41.33 | 4.61 |
574 | 575 | 1.747774 | GCCATGTGCAAAACCACCT | 59.252 | 52.632 | 0.00 | 0.00 | 40.77 | 4.00 |
575 | 576 | 0.319813 | GCCATGTGCAAAACCACCTC | 60.320 | 55.000 | 0.00 | 0.00 | 40.77 | 3.85 |
576 | 577 | 1.331214 | CCATGTGCAAAACCACCTCT | 58.669 | 50.000 | 0.00 | 0.00 | 34.85 | 3.69 |
578 | 579 | 2.228822 | CCATGTGCAAAACCACCTCTAC | 59.771 | 50.000 | 0.00 | 0.00 | 34.85 | 2.59 |
580 | 581 | 0.872388 | GTGCAAAACCACCTCTACGG | 59.128 | 55.000 | 0.00 | 0.00 | 39.35 | 4.02 |
582 | 583 | 1.693062 | TGCAAAACCACCTCTACGGTA | 59.307 | 47.619 | 0.00 | 0.00 | 46.94 | 4.02 |
583 | 584 | 2.104451 | TGCAAAACCACCTCTACGGTAA | 59.896 | 45.455 | 0.00 | 0.00 | 46.94 | 2.85 |
584 | 585 | 2.481568 | GCAAAACCACCTCTACGGTAAC | 59.518 | 50.000 | 0.00 | 0.00 | 46.94 | 2.50 |
585 | 586 | 3.804759 | GCAAAACCACCTCTACGGTAACT | 60.805 | 47.826 | 0.00 | 0.00 | 46.94 | 2.24 |
586 | 587 | 4.383173 | CAAAACCACCTCTACGGTAACTT | 58.617 | 43.478 | 0.00 | 0.00 | 46.94 | 2.66 |
587 | 588 | 3.949842 | AACCACCTCTACGGTAACTTC | 57.050 | 47.619 | 0.00 | 0.00 | 46.94 | 3.01 |
588 | 589 | 2.880443 | ACCACCTCTACGGTAACTTCA | 58.120 | 47.619 | 0.00 | 0.00 | 46.94 | 3.02 |
589 | 590 | 3.233507 | ACCACCTCTACGGTAACTTCAA | 58.766 | 45.455 | 0.00 | 0.00 | 46.94 | 2.69 |
590 | 591 | 3.642848 | ACCACCTCTACGGTAACTTCAAA | 59.357 | 43.478 | 0.00 | 0.00 | 46.94 | 2.69 |
591 | 592 | 3.992427 | CCACCTCTACGGTAACTTCAAAC | 59.008 | 47.826 | 0.00 | 0.00 | 46.94 | 2.93 |
594 | 595 | 5.699458 | CACCTCTACGGTAACTTCAAACAAT | 59.301 | 40.000 | 0.00 | 0.00 | 46.94 | 2.71 |
595 | 596 | 6.204108 | CACCTCTACGGTAACTTCAAACAATT | 59.796 | 38.462 | 0.00 | 0.00 | 46.94 | 2.32 |
596 | 597 | 6.426025 | ACCTCTACGGTAACTTCAAACAATTC | 59.574 | 38.462 | 0.00 | 0.00 | 46.73 | 2.17 |
597 | 598 | 6.649557 | CCTCTACGGTAACTTCAAACAATTCT | 59.350 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
599 | 600 | 9.199982 | CTCTACGGTAACTTCAAACAATTCTAA | 57.800 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
600 | 601 | 8.981647 | TCTACGGTAACTTCAAACAATTCTAAC | 58.018 | 33.333 | 0.00 | 0.00 | 0.00 | 2.34 |
602 | 603 | 8.161699 | ACGGTAACTTCAAACAATTCTAACAT | 57.838 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
609 | 610 | 9.480053 | ACTTCAAACAATTCTAACATTTGATGG | 57.520 | 29.630 | 12.59 | 6.48 | 38.64 | 3.51 |
662 | 663 | 2.905415 | AAAGGAATCAGGACCATGCA | 57.095 | 45.000 | 0.00 | 0.00 | 0.00 | 3.96 |
663 | 664 | 3.393426 | AAAGGAATCAGGACCATGCAT | 57.607 | 42.857 | 0.00 | 0.00 | 0.00 | 3.96 |
665 | 666 | 3.784511 | AGGAATCAGGACCATGCATAG | 57.215 | 47.619 | 0.00 | 0.00 | 0.00 | 2.23 |
666 | 667 | 3.051581 | AGGAATCAGGACCATGCATAGT | 58.948 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
667 | 668 | 3.461085 | AGGAATCAGGACCATGCATAGTT | 59.539 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
668 | 669 | 3.567164 | GGAATCAGGACCATGCATAGTTG | 59.433 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
670 | 671 | 3.548745 | TCAGGACCATGCATAGTTGAG | 57.451 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
671 | 672 | 2.171237 | TCAGGACCATGCATAGTTGAGG | 59.829 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
672 | 673 | 1.492176 | AGGACCATGCATAGTTGAGGG | 59.508 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
673 | 674 | 1.477558 | GGACCATGCATAGTTGAGGGG | 60.478 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
674 | 675 | 0.106519 | ACCATGCATAGTTGAGGGGC | 60.107 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
675 | 676 | 0.825010 | CCATGCATAGTTGAGGGGCC | 60.825 | 60.000 | 0.00 | 0.00 | 0.00 | 5.80 |
676 | 677 | 0.106569 | CATGCATAGTTGAGGGGCCA | 60.107 | 55.000 | 4.39 | 0.00 | 0.00 | 5.36 |
677 | 678 | 0.855598 | ATGCATAGTTGAGGGGCCAT | 59.144 | 50.000 | 4.39 | 0.00 | 0.00 | 4.40 |
678 | 679 | 1.517238 | TGCATAGTTGAGGGGCCATA | 58.483 | 50.000 | 4.39 | 0.00 | 0.00 | 2.74 |
679 | 680 | 1.849692 | TGCATAGTTGAGGGGCCATAA | 59.150 | 47.619 | 4.39 | 0.00 | 0.00 | 1.90 |
680 | 681 | 2.158623 | TGCATAGTTGAGGGGCCATAAG | 60.159 | 50.000 | 4.39 | 0.00 | 0.00 | 1.73 |
682 | 683 | 3.072476 | GCATAGTTGAGGGGCCATAAGTA | 59.928 | 47.826 | 4.39 | 4.81 | 0.00 | 2.24 |
683 | 684 | 4.642429 | CATAGTTGAGGGGCCATAAGTAC | 58.358 | 47.826 | 4.39 | 0.00 | 0.00 | 2.73 |
684 | 685 | 2.846950 | AGTTGAGGGGCCATAAGTACT | 58.153 | 47.619 | 4.39 | 0.00 | 0.00 | 2.73 |
685 | 686 | 3.190439 | AGTTGAGGGGCCATAAGTACTT | 58.810 | 45.455 | 13.68 | 13.68 | 0.00 | 2.24 |
686 | 687 | 3.591977 | AGTTGAGGGGCCATAAGTACTTT | 59.408 | 43.478 | 14.49 | 0.00 | 0.00 | 2.66 |
688 | 689 | 4.668138 | TGAGGGGCCATAAGTACTTTTT | 57.332 | 40.909 | 14.49 | 0.00 | 0.00 | 1.94 |
722 | 3808 | 1.886886 | AAAAACGATAGGTGTGGCGT | 58.113 | 45.000 | 0.00 | 0.00 | 43.77 | 5.68 |
748 | 3834 | 2.136298 | AGCAGAGTAGCAGCAGAGTA | 57.864 | 50.000 | 0.00 | 0.00 | 36.85 | 2.59 |
772 | 3861 | 1.111116 | CGGAAGCACCCGGTATCCTA | 61.111 | 60.000 | 0.00 | 0.00 | 45.43 | 2.94 |
786 | 3876 | 4.381292 | CGGTATCCTAGAAAACCAACGTCT | 60.381 | 45.833 | 0.00 | 0.00 | 32.04 | 4.18 |
805 | 3895 | 0.463654 | TGCGACCACTGTTTTGCTCT | 60.464 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
814 | 3904 | 2.972713 | ACTGTTTTGCTCTAGACCTCCA | 59.027 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
815 | 3905 | 3.007398 | ACTGTTTTGCTCTAGACCTCCAG | 59.993 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
853 | 3958 | 1.141881 | CTCGTCCCAATCCCACTCG | 59.858 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
919 | 4056 | 4.352893 | TCATTCCATACTCCACACTCAGA | 58.647 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
1077 | 4233 | 2.673523 | CTCAAGGACCAGGCTGGG | 59.326 | 66.667 | 35.34 | 18.45 | 43.37 | 4.45 |
1107 | 4263 | 1.516423 | GAACTACGCCCTCAGGTCC | 59.484 | 63.158 | 0.00 | 0.00 | 34.57 | 4.46 |
1108 | 4264 | 1.229082 | AACTACGCCCTCAGGTCCA | 60.229 | 57.895 | 0.00 | 0.00 | 34.57 | 4.02 |
1109 | 4265 | 0.617820 | AACTACGCCCTCAGGTCCAT | 60.618 | 55.000 | 0.00 | 0.00 | 34.57 | 3.41 |
1122 | 4278 | 3.488569 | TCCATCATCCACCGGGCC | 61.489 | 66.667 | 6.32 | 0.00 | 0.00 | 5.80 |
1234 | 4390 | 4.806339 | AGAAGGCCGAGGAGGGGG | 62.806 | 72.222 | 0.00 | 0.00 | 41.48 | 5.40 |
1289 | 4445 | 1.990563 | CAATTAGCAGCTGCAACTTGC | 59.009 | 47.619 | 38.24 | 12.83 | 45.16 | 4.01 |
1298 | 4473 | 0.168348 | CTGCAACTTGCTGCTAGCTG | 59.832 | 55.000 | 17.23 | 16.92 | 45.31 | 4.24 |
1299 | 4474 | 0.250424 | TGCAACTTGCTGCTAGCTGA | 60.250 | 50.000 | 24.19 | 7.59 | 45.31 | 4.26 |
1300 | 4475 | 0.447011 | GCAACTTGCTGCTAGCTGAG | 59.553 | 55.000 | 24.19 | 15.55 | 42.97 | 3.35 |
1301 | 4476 | 1.085091 | CAACTTGCTGCTAGCTGAGG | 58.915 | 55.000 | 24.19 | 14.42 | 42.97 | 3.86 |
1302 | 4477 | 0.979665 | AACTTGCTGCTAGCTGAGGA | 59.020 | 50.000 | 24.19 | 8.96 | 42.97 | 3.71 |
1303 | 4478 | 0.536260 | ACTTGCTGCTAGCTGAGGAG | 59.464 | 55.000 | 24.19 | 18.02 | 46.16 | 3.69 |
1304 | 4479 | 0.179078 | CTTGCTGCTAGCTGAGGAGG | 60.179 | 60.000 | 24.19 | 8.42 | 43.67 | 4.30 |
1305 | 4480 | 1.620739 | TTGCTGCTAGCTGAGGAGGG | 61.621 | 60.000 | 24.19 | 2.29 | 43.67 | 4.30 |
1306 | 4481 | 2.806009 | GCTGCTAGCTGAGGAGGGG | 61.806 | 68.421 | 24.19 | 1.34 | 43.67 | 4.79 |
1307 | 4482 | 2.765807 | TGCTAGCTGAGGAGGGGC | 60.766 | 66.667 | 17.23 | 0.00 | 0.00 | 5.80 |
1308 | 4483 | 2.445654 | GCTAGCTGAGGAGGGGCT | 60.446 | 66.667 | 7.70 | 0.00 | 39.74 | 5.19 |
1309 | 4484 | 2.806009 | GCTAGCTGAGGAGGGGCTG | 61.806 | 68.421 | 7.70 | 0.00 | 37.50 | 4.85 |
1310 | 4485 | 1.075674 | CTAGCTGAGGAGGGGCTGA | 60.076 | 63.158 | 0.00 | 0.00 | 37.50 | 4.26 |
1311 | 4486 | 1.075674 | TAGCTGAGGAGGGGCTGAG | 60.076 | 63.158 | 0.00 | 0.00 | 37.50 | 3.35 |
1312 | 4487 | 2.595954 | TAGCTGAGGAGGGGCTGAGG | 62.596 | 65.000 | 0.00 | 0.00 | 37.50 | 3.86 |
1313 | 4488 | 2.366167 | CTGAGGAGGGGCTGAGGA | 59.634 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
1314 | 4489 | 2.039624 | TGAGGAGGGGCTGAGGAC | 59.960 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
1315 | 4490 | 3.151022 | GAGGAGGGGCTGAGGACG | 61.151 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
1316 | 4491 | 4.787280 | AGGAGGGGCTGAGGACGG | 62.787 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
1318 | 4493 | 3.775654 | GAGGGGCTGAGGACGGTG | 61.776 | 72.222 | 0.00 | 0.00 | 0.00 | 4.94 |
1319 | 4494 | 4.316823 | AGGGGCTGAGGACGGTGA | 62.317 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
1320 | 4495 | 4.083862 | GGGGCTGAGGACGGTGAC | 62.084 | 72.222 | 0.00 | 0.00 | 0.00 | 3.67 |
1333 | 4508 | 2.823628 | GGTGACGTACCTCAACTGC | 58.176 | 57.895 | 2.97 | 0.00 | 46.51 | 4.40 |
1334 | 4509 | 0.317479 | GGTGACGTACCTCAACTGCT | 59.683 | 55.000 | 2.97 | 0.00 | 46.51 | 4.24 |
1345 | 4520 | 0.243907 | TCAACTGCTAGGCGTGTCTC | 59.756 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1379 | 4554 | 0.540365 | ACCATGGCCTGAAACCTGTG | 60.540 | 55.000 | 13.04 | 0.00 | 0.00 | 3.66 |
1391 | 4566 | 2.113139 | CCTGTGTGGCTTCCCGTT | 59.887 | 61.111 | 0.00 | 0.00 | 0.00 | 4.44 |
1397 | 4572 | 0.953471 | TGTGGCTTCCCGTTGAATCG | 60.953 | 55.000 | 0.00 | 0.00 | 31.06 | 3.34 |
1401 | 4576 | 1.376683 | CTTCCCGTTGAATCGCCCA | 60.377 | 57.895 | 0.00 | 0.00 | 31.06 | 5.36 |
1418 | 4593 | 3.383185 | CGCCCATTGTAAAATACCACCAT | 59.617 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
1419 | 4594 | 4.692228 | GCCCATTGTAAAATACCACCATG | 58.308 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
1729 | 4904 | 2.745884 | CGCCGCCATCTTCCACAA | 60.746 | 61.111 | 0.00 | 0.00 | 0.00 | 3.33 |
1798 | 4973 | 0.530650 | GCCATCGACGTCACCATGAT | 60.531 | 55.000 | 17.16 | 6.72 | 0.00 | 2.45 |
2179 | 5359 | 3.873812 | GGGAATGGCGTCCGGGAT | 61.874 | 66.667 | 0.00 | 0.00 | 38.72 | 3.85 |
2256 | 5436 | 4.003788 | CGCCACCTCCGAACCAGT | 62.004 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
1 | 2 | 2.059541 | GCGCTACTTCTTCGAGTTTGT | 58.940 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
2 | 3 | 1.057847 | CGCGCTACTTCTTCGAGTTTG | 59.942 | 52.381 | 5.56 | 0.00 | 0.00 | 2.93 |
5 | 6 | 1.136984 | CCGCGCTACTTCTTCGAGT | 59.863 | 57.895 | 5.56 | 0.00 | 0.00 | 4.18 |
7 | 8 | 1.136147 | GACCGCGCTACTTCTTCGA | 59.864 | 57.895 | 5.56 | 0.00 | 0.00 | 3.71 |
8 | 9 | 0.525668 | ATGACCGCGCTACTTCTTCG | 60.526 | 55.000 | 5.56 | 0.00 | 0.00 | 3.79 |
10 | 11 | 0.179108 | GGATGACCGCGCTACTTCTT | 60.179 | 55.000 | 5.56 | 0.00 | 0.00 | 2.52 |
11 | 12 | 1.437986 | GGATGACCGCGCTACTTCT | 59.562 | 57.895 | 5.56 | 0.00 | 0.00 | 2.85 |
12 | 13 | 4.014065 | GGATGACCGCGCTACTTC | 57.986 | 61.111 | 5.56 | 4.44 | 0.00 | 3.01 |
31 | 32 | 4.814294 | GTAGGTGCGGTGCTCGGG | 62.814 | 72.222 | 2.61 | 0.00 | 39.69 | 5.14 |
33 | 34 | 4.111016 | TCGTAGGTGCGGTGCTCG | 62.111 | 66.667 | 0.00 | 0.00 | 42.76 | 5.03 |
35 | 36 | 3.760035 | CCTCGTAGGTGCGGTGCT | 61.760 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
36 | 37 | 3.755628 | TCCTCGTAGGTGCGGTGC | 61.756 | 66.667 | 1.60 | 0.00 | 36.53 | 5.01 |
37 | 38 | 2.181021 | GTCCTCGTAGGTGCGGTG | 59.819 | 66.667 | 1.60 | 0.00 | 36.53 | 4.94 |
38 | 39 | 2.035312 | AGTCCTCGTAGGTGCGGT | 59.965 | 61.111 | 1.60 | 0.00 | 36.53 | 5.68 |
39 | 40 | 1.592400 | TTCAGTCCTCGTAGGTGCGG | 61.592 | 60.000 | 1.60 | 0.00 | 36.53 | 5.69 |
40 | 41 | 0.242825 | TTTCAGTCCTCGTAGGTGCG | 59.757 | 55.000 | 1.60 | 0.00 | 36.53 | 5.34 |
41 | 42 | 2.450609 | TTTTCAGTCCTCGTAGGTGC | 57.549 | 50.000 | 1.60 | 0.00 | 36.53 | 5.01 |
58 | 59 | 9.565090 | CCAGTTAGTAGTTTAGGTTAGGTTTTT | 57.435 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
59 | 60 | 8.937835 | TCCAGTTAGTAGTTTAGGTTAGGTTTT | 58.062 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
60 | 61 | 8.496534 | TCCAGTTAGTAGTTTAGGTTAGGTTT | 57.503 | 34.615 | 0.00 | 0.00 | 0.00 | 3.27 |
61 | 62 | 7.310299 | GCTCCAGTTAGTAGTTTAGGTTAGGTT | 60.310 | 40.741 | 0.00 | 0.00 | 0.00 | 3.50 |
63 | 64 | 6.571605 | GCTCCAGTTAGTAGTTTAGGTTAGG | 58.428 | 44.000 | 0.00 | 0.00 | 0.00 | 2.69 |
64 | 65 | 6.264088 | CGCTCCAGTTAGTAGTTTAGGTTAG | 58.736 | 44.000 | 0.00 | 0.00 | 0.00 | 2.34 |
65 | 66 | 5.126061 | CCGCTCCAGTTAGTAGTTTAGGTTA | 59.874 | 44.000 | 0.00 | 0.00 | 0.00 | 2.85 |
66 | 67 | 4.081807 | CCGCTCCAGTTAGTAGTTTAGGTT | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 3.50 |
67 | 68 | 3.446516 | CCGCTCCAGTTAGTAGTTTAGGT | 59.553 | 47.826 | 0.00 | 0.00 | 0.00 | 3.08 |
68 | 69 | 3.698040 | TCCGCTCCAGTTAGTAGTTTAGG | 59.302 | 47.826 | 0.00 | 0.00 | 0.00 | 2.69 |
69 | 70 | 4.202030 | CCTCCGCTCCAGTTAGTAGTTTAG | 60.202 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
70 | 71 | 3.698040 | CCTCCGCTCCAGTTAGTAGTTTA | 59.302 | 47.826 | 0.00 | 0.00 | 0.00 | 2.01 |
71 | 72 | 2.496470 | CCTCCGCTCCAGTTAGTAGTTT | 59.504 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
72 | 73 | 2.100989 | CCTCCGCTCCAGTTAGTAGTT | 58.899 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
73 | 74 | 1.765230 | CCTCCGCTCCAGTTAGTAGT | 58.235 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
75 | 76 | 0.323999 | TGCCTCCGCTCCAGTTAGTA | 60.324 | 55.000 | 0.00 | 0.00 | 35.36 | 1.82 |
76 | 77 | 1.609501 | TGCCTCCGCTCCAGTTAGT | 60.610 | 57.895 | 0.00 | 0.00 | 35.36 | 2.24 |
77 | 78 | 1.153549 | GTGCCTCCGCTCCAGTTAG | 60.154 | 63.158 | 0.00 | 0.00 | 35.36 | 2.34 |
79 | 80 | 4.021925 | GGTGCCTCCGCTCCAGTT | 62.022 | 66.667 | 0.00 | 0.00 | 46.07 | 3.16 |
88 | 89 | 2.124278 | GGGAATTCCGGTGCCTCC | 60.124 | 66.667 | 18.30 | 3.65 | 36.71 | 4.30 |
90 | 91 | 2.614013 | AGGGGAATTCCGGTGCCT | 60.614 | 61.111 | 18.30 | 15.30 | 36.71 | 4.75 |
91 | 92 | 2.124278 | GAGGGGAATTCCGGTGCC | 60.124 | 66.667 | 18.30 | 13.27 | 36.71 | 5.01 |
93 | 94 | 2.595655 | GGGAGGGGAATTCCGGTG | 59.404 | 66.667 | 18.30 | 0.00 | 35.48 | 4.94 |
95 | 96 | 3.873812 | CGGGGAGGGGAATTCCGG | 61.874 | 72.222 | 18.30 | 0.00 | 37.35 | 5.14 |
96 | 97 | 3.087906 | ACGGGGAGGGGAATTCCG | 61.088 | 66.667 | 18.30 | 8.12 | 45.42 | 4.30 |
97 | 98 | 1.999002 | TGACGGGGAGGGGAATTCC | 60.999 | 63.158 | 16.74 | 16.74 | 0.00 | 3.01 |
98 | 99 | 1.223763 | GTGACGGGGAGGGGAATTC | 59.776 | 63.158 | 0.00 | 0.00 | 0.00 | 2.17 |
99 | 100 | 1.229853 | AGTGACGGGGAGGGGAATT | 60.230 | 57.895 | 0.00 | 0.00 | 0.00 | 2.17 |
100 | 101 | 1.995626 | CAGTGACGGGGAGGGGAAT | 60.996 | 63.158 | 0.00 | 0.00 | 0.00 | 3.01 |
101 | 102 | 2.606519 | CAGTGACGGGGAGGGGAA | 60.607 | 66.667 | 0.00 | 0.00 | 0.00 | 3.97 |
102 | 103 | 4.715130 | CCAGTGACGGGGAGGGGA | 62.715 | 72.222 | 0.00 | 0.00 | 0.00 | 4.81 |
122 | 123 | 0.741221 | CCTCTGTTTACCGCTCTGGC | 60.741 | 60.000 | 0.00 | 0.00 | 43.94 | 4.85 |
123 | 124 | 0.108138 | CCCTCTGTTTACCGCTCTGG | 60.108 | 60.000 | 0.00 | 0.00 | 46.41 | 3.86 |
124 | 125 | 0.108138 | CCCCTCTGTTTACCGCTCTG | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 3.35 |
125 | 126 | 1.265454 | CCCCCTCTGTTTACCGCTCT | 61.265 | 60.000 | 0.00 | 0.00 | 0.00 | 4.09 |
126 | 127 | 1.221021 | CCCCCTCTGTTTACCGCTC | 59.779 | 63.158 | 0.00 | 0.00 | 0.00 | 5.03 |
127 | 128 | 1.229400 | TCCCCCTCTGTTTACCGCT | 60.229 | 57.895 | 0.00 | 0.00 | 0.00 | 5.52 |
128 | 129 | 1.221021 | CTCCCCCTCTGTTTACCGC | 59.779 | 63.158 | 0.00 | 0.00 | 0.00 | 5.68 |
129 | 130 | 1.623542 | CCCTCCCCCTCTGTTTACCG | 61.624 | 65.000 | 0.00 | 0.00 | 0.00 | 4.02 |
130 | 131 | 1.279749 | CCCCTCCCCCTCTGTTTACC | 61.280 | 65.000 | 0.00 | 0.00 | 0.00 | 2.85 |
131 | 132 | 1.279749 | CCCCCTCCCCCTCTGTTTAC | 61.280 | 65.000 | 0.00 | 0.00 | 0.00 | 2.01 |
132 | 133 | 1.084084 | CCCCCTCCCCCTCTGTTTA | 59.916 | 63.158 | 0.00 | 0.00 | 0.00 | 2.01 |
133 | 134 | 2.204306 | CCCCCTCCCCCTCTGTTT | 60.204 | 66.667 | 0.00 | 0.00 | 0.00 | 2.83 |
148 | 149 | 4.796495 | AGCCCGTTGATTCGCCCC | 62.796 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
149 | 150 | 3.202706 | GAGCCCGTTGATTCGCCC | 61.203 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
150 | 151 | 3.564027 | CGAGCCCGTTGATTCGCC | 61.564 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
161 | 162 | 2.142357 | GAAACTTTGCCCACGAGCCC | 62.142 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
163 | 164 | 0.383949 | TTGAAACTTTGCCCACGAGC | 59.616 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
164 | 165 | 1.946768 | TCTTGAAACTTTGCCCACGAG | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
165 | 166 | 1.946768 | CTCTTGAAACTTTGCCCACGA | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
166 | 167 | 1.946768 | TCTCTTGAAACTTTGCCCACG | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 4.94 |
167 | 168 | 4.385358 | TTTCTCTTGAAACTTTGCCCAC | 57.615 | 40.909 | 0.00 | 0.00 | 37.27 | 4.61 |
169 | 170 | 5.011090 | ACTTTTCTCTTGAAACTTTGCCC | 57.989 | 39.130 | 0.00 | 0.00 | 41.34 | 5.36 |
170 | 171 | 6.673076 | GCAAACTTTTCTCTTGAAACTTTGCC | 60.673 | 38.462 | 20.94 | 11.89 | 45.94 | 4.52 |
172 | 173 | 6.183360 | GGGCAAACTTTTCTCTTGAAACTTTG | 60.183 | 38.462 | 12.11 | 12.11 | 41.34 | 2.77 |
174 | 175 | 5.187772 | AGGGCAAACTTTTCTCTTGAAACTT | 59.812 | 36.000 | 0.00 | 0.00 | 41.34 | 2.66 |
175 | 176 | 4.711846 | AGGGCAAACTTTTCTCTTGAAACT | 59.288 | 37.500 | 0.00 | 0.00 | 41.34 | 2.66 |
177 | 178 | 6.039382 | GTCTAGGGCAAACTTTTCTCTTGAAA | 59.961 | 38.462 | 0.00 | 0.00 | 40.08 | 2.69 |
179 | 180 | 5.063880 | GTCTAGGGCAAACTTTTCTCTTGA | 58.936 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
181 | 182 | 4.065789 | CGTCTAGGGCAAACTTTTCTCTT | 58.934 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
182 | 183 | 3.665190 | CGTCTAGGGCAAACTTTTCTCT | 58.335 | 45.455 | 0.00 | 0.00 | 0.00 | 3.10 |
183 | 184 | 2.159824 | GCGTCTAGGGCAAACTTTTCTC | 59.840 | 50.000 | 2.35 | 0.00 | 0.00 | 2.87 |
185 | 186 | 1.199327 | GGCGTCTAGGGCAAACTTTTC | 59.801 | 52.381 | 8.60 | 0.00 | 0.00 | 2.29 |
186 | 187 | 1.202891 | AGGCGTCTAGGGCAAACTTTT | 60.203 | 47.619 | 0.00 | 0.00 | 34.40 | 2.27 |
187 | 188 | 0.400594 | AGGCGTCTAGGGCAAACTTT | 59.599 | 50.000 | 0.00 | 0.00 | 34.40 | 2.66 |
188 | 189 | 1.207329 | CTAGGCGTCTAGGGCAAACTT | 59.793 | 52.381 | 16.51 | 0.00 | 39.36 | 2.66 |
200 | 201 | 0.751452 | CTTCCCTAACCCTAGGCGTC | 59.249 | 60.000 | 2.05 | 0.00 | 43.25 | 5.19 |
201 | 202 | 0.690077 | CCTTCCCTAACCCTAGGCGT | 60.690 | 60.000 | 2.05 | 0.00 | 43.25 | 5.68 |
203 | 204 | 1.889174 | TTCCTTCCCTAACCCTAGGC | 58.111 | 55.000 | 2.05 | 0.00 | 43.25 | 3.93 |
205 | 206 | 3.516700 | TCGTTTTCCTTCCCTAACCCTAG | 59.483 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
207 | 208 | 2.305052 | CTCGTTTTCCTTCCCTAACCCT | 59.695 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
208 | 209 | 2.303890 | TCTCGTTTTCCTTCCCTAACCC | 59.696 | 50.000 | 0.00 | 0.00 | 0.00 | 4.11 |
209 | 210 | 3.690475 | TCTCGTTTTCCTTCCCTAACC | 57.310 | 47.619 | 0.00 | 0.00 | 0.00 | 2.85 |
210 | 211 | 4.891260 | TCTTCTCGTTTTCCTTCCCTAAC | 58.109 | 43.478 | 0.00 | 0.00 | 0.00 | 2.34 |
213 | 214 | 3.807561 | GCTTCTTCTCGTTTTCCTTCCCT | 60.808 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
214 | 215 | 2.484651 | GCTTCTTCTCGTTTTCCTTCCC | 59.515 | 50.000 | 0.00 | 0.00 | 0.00 | 3.97 |
215 | 216 | 2.484651 | GGCTTCTTCTCGTTTTCCTTCC | 59.515 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
216 | 217 | 2.157863 | CGGCTTCTTCTCGTTTTCCTTC | 59.842 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
217 | 218 | 2.143925 | CGGCTTCTTCTCGTTTTCCTT | 58.856 | 47.619 | 0.00 | 0.00 | 0.00 | 3.36 |
218 | 219 | 1.608283 | CCGGCTTCTTCTCGTTTTCCT | 60.608 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
221 | 222 | 0.395312 | TCCCGGCTTCTTCTCGTTTT | 59.605 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
222 | 223 | 0.395312 | TTCCCGGCTTCTTCTCGTTT | 59.605 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
223 | 224 | 0.613777 | ATTCCCGGCTTCTTCTCGTT | 59.386 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
224 | 225 | 0.613777 | AATTCCCGGCTTCTTCTCGT | 59.386 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
225 | 226 | 1.398390 | CAAATTCCCGGCTTCTTCTCG | 59.602 | 52.381 | 0.00 | 0.00 | 0.00 | 4.04 |
226 | 227 | 2.437413 | ACAAATTCCCGGCTTCTTCTC | 58.563 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
227 | 228 | 2.586648 | ACAAATTCCCGGCTTCTTCT | 57.413 | 45.000 | 0.00 | 0.00 | 0.00 | 2.85 |
229 | 230 | 3.756963 | GACTTACAAATTCCCGGCTTCTT | 59.243 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
230 | 231 | 3.009143 | AGACTTACAAATTCCCGGCTTCT | 59.991 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
232 | 233 | 3.434940 | AGACTTACAAATTCCCGGCTT | 57.565 | 42.857 | 0.00 | 0.00 | 0.00 | 4.35 |
234 | 235 | 6.316890 | TGTTTATAGACTTACAAATTCCCGGC | 59.683 | 38.462 | 0.00 | 0.00 | 0.00 | 6.13 |
235 | 236 | 7.852971 | TGTTTATAGACTTACAAATTCCCGG | 57.147 | 36.000 | 0.00 | 0.00 | 0.00 | 5.73 |
253 | 254 | 9.449719 | ACTCTTCATTTCCGAAGTTATGTTTAT | 57.550 | 29.630 | 0.00 | 0.00 | 42.53 | 1.40 |
254 | 255 | 8.842358 | ACTCTTCATTTCCGAAGTTATGTTTA | 57.158 | 30.769 | 0.00 | 0.00 | 42.53 | 2.01 |
255 | 256 | 7.745620 | ACTCTTCATTTCCGAAGTTATGTTT | 57.254 | 32.000 | 0.00 | 0.00 | 42.53 | 2.83 |
256 | 257 | 7.745620 | AACTCTTCATTTCCGAAGTTATGTT | 57.254 | 32.000 | 0.00 | 0.00 | 42.53 | 2.71 |
257 | 258 | 7.876068 | TGTAACTCTTCATTTCCGAAGTTATGT | 59.124 | 33.333 | 0.00 | 0.00 | 42.53 | 2.29 |
261 | 262 | 6.990349 | TCTTGTAACTCTTCATTTCCGAAGTT | 59.010 | 34.615 | 0.00 | 0.00 | 42.53 | 2.66 |
262 | 263 | 6.522054 | TCTTGTAACTCTTCATTTCCGAAGT | 58.478 | 36.000 | 0.00 | 0.00 | 42.53 | 3.01 |
263 | 264 | 7.421530 | TTCTTGTAACTCTTCATTTCCGAAG | 57.578 | 36.000 | 0.00 | 0.00 | 43.17 | 3.79 |
265 | 266 | 7.795482 | TTTTCTTGTAACTCTTCATTTCCGA | 57.205 | 32.000 | 0.00 | 0.00 | 0.00 | 4.55 |
343 | 344 | 9.898152 | TCTTCACATTTAAAATTCCCTTTGTTT | 57.102 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
344 | 345 | 9.898152 | TTCTTCACATTTAAAATTCCCTTTGTT | 57.102 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
345 | 346 | 9.325198 | GTTCTTCACATTTAAAATTCCCTTTGT | 57.675 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
346 | 347 | 9.546428 | AGTTCTTCACATTTAAAATTCCCTTTG | 57.454 | 29.630 | 0.00 | 0.00 | 0.00 | 2.77 |
347 | 348 | 9.546428 | CAGTTCTTCACATTTAAAATTCCCTTT | 57.454 | 29.630 | 0.00 | 0.00 | 0.00 | 3.11 |
348 | 349 | 8.923270 | TCAGTTCTTCACATTTAAAATTCCCTT | 58.077 | 29.630 | 0.00 | 0.00 | 0.00 | 3.95 |
349 | 350 | 8.477419 | TCAGTTCTTCACATTTAAAATTCCCT | 57.523 | 30.769 | 0.00 | 0.00 | 0.00 | 4.20 |
358 | 359 | 8.156820 | TCCTCAAATCTCAGTTCTTCACATTTA | 58.843 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
360 | 361 | 6.537355 | TCCTCAAATCTCAGTTCTTCACATT | 58.463 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
362 | 363 | 5.551305 | TCCTCAAATCTCAGTTCTTCACA | 57.449 | 39.130 | 0.00 | 0.00 | 0.00 | 3.58 |
363 | 364 | 6.867662 | TTTCCTCAAATCTCAGTTCTTCAC | 57.132 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
364 | 365 | 9.573166 | TTTATTTCCTCAAATCTCAGTTCTTCA | 57.427 | 29.630 | 0.00 | 0.00 | 33.95 | 3.02 |
367 | 368 | 9.525826 | ACATTTATTTCCTCAAATCTCAGTTCT | 57.474 | 29.630 | 0.00 | 0.00 | 33.95 | 3.01 |
432 | 433 | 8.800332 | GGAAATGTGAAATTGGATAGCTATCAT | 58.200 | 33.333 | 30.03 | 16.32 | 34.40 | 2.45 |
433 | 434 | 8.000709 | AGGAAATGTGAAATTGGATAGCTATCA | 58.999 | 33.333 | 30.03 | 14.84 | 34.40 | 2.15 |
434 | 435 | 8.401490 | AGGAAATGTGAAATTGGATAGCTATC | 57.599 | 34.615 | 23.23 | 23.23 | 0.00 | 2.08 |
435 | 436 | 9.866655 | TTAGGAAATGTGAAATTGGATAGCTAT | 57.133 | 29.630 | 5.76 | 5.76 | 0.00 | 2.97 |
437 | 438 | 8.593945 | TTTAGGAAATGTGAAATTGGATAGCT | 57.406 | 30.769 | 0.00 | 0.00 | 0.00 | 3.32 |
438 | 439 | 9.822185 | ATTTTAGGAAATGTGAAATTGGATAGC | 57.178 | 29.630 | 0.00 | 0.00 | 34.26 | 2.97 |
484 | 485 | 8.768397 | GGGGAAATGAAAATACTTTTAGGGAAT | 58.232 | 33.333 | 0.00 | 0.00 | 31.94 | 3.01 |
485 | 486 | 7.735321 | TGGGGAAATGAAAATACTTTTAGGGAA | 59.265 | 33.333 | 0.00 | 0.00 | 31.94 | 3.97 |
486 | 487 | 7.249715 | TGGGGAAATGAAAATACTTTTAGGGA | 58.750 | 34.615 | 0.00 | 0.00 | 31.94 | 4.20 |
487 | 488 | 7.489239 | TGGGGAAATGAAAATACTTTTAGGG | 57.511 | 36.000 | 0.00 | 0.00 | 31.94 | 3.53 |
494 | 495 | 9.942526 | AGAATAGAATGGGGAAATGAAAATACT | 57.057 | 29.630 | 0.00 | 0.00 | 0.00 | 2.12 |
497 | 498 | 9.050154 | ACAAGAATAGAATGGGGAAATGAAAAT | 57.950 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
499 | 500 | 8.434589 | AACAAGAATAGAATGGGGAAATGAAA | 57.565 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
501 | 502 | 6.607198 | GGAACAAGAATAGAATGGGGAAATGA | 59.393 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
502 | 503 | 6.608808 | AGGAACAAGAATAGAATGGGGAAATG | 59.391 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
503 | 504 | 6.745857 | AGGAACAAGAATAGAATGGGGAAAT | 58.254 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
504 | 505 | 6.152638 | AGGAACAAGAATAGAATGGGGAAA | 57.847 | 37.500 | 0.00 | 0.00 | 0.00 | 3.13 |
505 | 506 | 5.796502 | AGGAACAAGAATAGAATGGGGAA | 57.203 | 39.130 | 0.00 | 0.00 | 0.00 | 3.97 |
506 | 507 | 5.796502 | AAGGAACAAGAATAGAATGGGGA | 57.203 | 39.130 | 0.00 | 0.00 | 0.00 | 4.81 |
507 | 508 | 6.437162 | TGAAAAGGAACAAGAATAGAATGGGG | 59.563 | 38.462 | 0.00 | 0.00 | 0.00 | 4.96 |
508 | 509 | 7.466746 | TGAAAAGGAACAAGAATAGAATGGG | 57.533 | 36.000 | 0.00 | 0.00 | 0.00 | 4.00 |
510 | 511 | 9.971922 | AAGTTGAAAAGGAACAAGAATAGAATG | 57.028 | 29.630 | 0.00 | 0.00 | 0.00 | 2.67 |
517 | 518 | 8.878769 | GCAAATAAAGTTGAAAAGGAACAAGAA | 58.121 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
518 | 519 | 8.037758 | TGCAAATAAAGTTGAAAAGGAACAAGA | 58.962 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
519 | 520 | 8.116136 | GTGCAAATAAAGTTGAAAAGGAACAAG | 58.884 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
520 | 521 | 7.604164 | TGTGCAAATAAAGTTGAAAAGGAACAA | 59.396 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
521 | 522 | 7.064016 | GTGTGCAAATAAAGTTGAAAAGGAACA | 59.936 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
522 | 523 | 7.277760 | AGTGTGCAAATAAAGTTGAAAAGGAAC | 59.722 | 33.333 | 0.00 | 0.00 | 0.00 | 3.62 |
523 | 524 | 7.327214 | AGTGTGCAAATAAAGTTGAAAAGGAA | 58.673 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
524 | 525 | 6.872920 | AGTGTGCAAATAAAGTTGAAAAGGA | 58.127 | 32.000 | 0.00 | 0.00 | 0.00 | 3.36 |
525 | 526 | 7.538303 | AAGTGTGCAAATAAAGTTGAAAAGG | 57.462 | 32.000 | 0.00 | 0.00 | 0.00 | 3.11 |
526 | 527 | 8.268738 | GCTAAGTGTGCAAATAAAGTTGAAAAG | 58.731 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
527 | 528 | 7.978975 | AGCTAAGTGTGCAAATAAAGTTGAAAA | 59.021 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
528 | 529 | 7.488322 | AGCTAAGTGTGCAAATAAAGTTGAAA | 58.512 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
529 | 530 | 7.038154 | AGCTAAGTGTGCAAATAAAGTTGAA | 57.962 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
530 | 531 | 6.633500 | AGCTAAGTGTGCAAATAAAGTTGA | 57.367 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
531 | 532 | 6.519761 | CGTAGCTAAGTGTGCAAATAAAGTTG | 59.480 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
532 | 533 | 6.599437 | CGTAGCTAAGTGTGCAAATAAAGTT | 58.401 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
533 | 534 | 6.165659 | CGTAGCTAAGTGTGCAAATAAAGT | 57.834 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
556 | 557 | 0.319813 | GAGGTGGTTTTGCACATGGC | 60.320 | 55.000 | 0.00 | 0.00 | 45.13 | 4.40 |
557 | 558 | 1.331214 | AGAGGTGGTTTTGCACATGG | 58.669 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
559 | 560 | 2.151202 | CGTAGAGGTGGTTTTGCACAT | 58.849 | 47.619 | 0.00 | 0.00 | 0.00 | 3.21 |
561 | 562 | 0.872388 | CCGTAGAGGTGGTTTTGCAC | 59.128 | 55.000 | 0.00 | 0.00 | 34.51 | 4.57 |
562 | 563 | 3.315765 | CCGTAGAGGTGGTTTTGCA | 57.684 | 52.632 | 0.00 | 0.00 | 34.51 | 4.08 |
573 | 574 | 7.653767 | AGAATTGTTTGAAGTTACCGTAGAG | 57.346 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
574 | 575 | 8.981647 | GTTAGAATTGTTTGAAGTTACCGTAGA | 58.018 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
575 | 576 | 8.767085 | TGTTAGAATTGTTTGAAGTTACCGTAG | 58.233 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
576 | 577 | 8.659925 | TGTTAGAATTGTTTGAAGTTACCGTA | 57.340 | 30.769 | 0.00 | 0.00 | 0.00 | 4.02 |
578 | 579 | 9.458374 | AAATGTTAGAATTGTTTGAAGTTACCG | 57.542 | 29.630 | 0.00 | 0.00 | 0.00 | 4.02 |
583 | 584 | 9.480053 | CCATCAAATGTTAGAATTGTTTGAAGT | 57.520 | 29.630 | 3.37 | 0.00 | 40.75 | 3.01 |
584 | 585 | 9.695526 | TCCATCAAATGTTAGAATTGTTTGAAG | 57.304 | 29.630 | 3.37 | 0.00 | 40.75 | 3.02 |
642 | 643 | 3.173953 | TGCATGGTCCTGATTCCTTTT | 57.826 | 42.857 | 0.00 | 0.00 | 0.00 | 2.27 |
643 | 644 | 2.905415 | TGCATGGTCCTGATTCCTTT | 57.095 | 45.000 | 0.00 | 0.00 | 0.00 | 3.11 |
645 | 646 | 3.051581 | ACTATGCATGGTCCTGATTCCT | 58.948 | 45.455 | 10.30 | 0.00 | 0.00 | 3.36 |
647 | 648 | 4.454678 | TCAACTATGCATGGTCCTGATTC | 58.545 | 43.478 | 16.73 | 0.00 | 0.00 | 2.52 |
648 | 649 | 4.458397 | CTCAACTATGCATGGTCCTGATT | 58.542 | 43.478 | 16.73 | 0.00 | 0.00 | 2.57 |
650 | 651 | 2.171237 | CCTCAACTATGCATGGTCCTGA | 59.829 | 50.000 | 16.73 | 15.46 | 0.00 | 3.86 |
652 | 653 | 1.492176 | CCCTCAACTATGCATGGTCCT | 59.508 | 52.381 | 16.73 | 0.00 | 0.00 | 3.85 |
653 | 654 | 1.477558 | CCCCTCAACTATGCATGGTCC | 60.478 | 57.143 | 16.73 | 0.00 | 0.00 | 4.46 |
654 | 655 | 1.972872 | CCCCTCAACTATGCATGGTC | 58.027 | 55.000 | 16.73 | 0.00 | 0.00 | 4.02 |
655 | 656 | 0.106519 | GCCCCTCAACTATGCATGGT | 60.107 | 55.000 | 10.30 | 10.30 | 0.00 | 3.55 |
656 | 657 | 0.825010 | GGCCCCTCAACTATGCATGG | 60.825 | 60.000 | 10.16 | 9.41 | 0.00 | 3.66 |
657 | 658 | 0.106569 | TGGCCCCTCAACTATGCATG | 60.107 | 55.000 | 10.16 | 1.82 | 0.00 | 4.06 |
658 | 659 | 0.855598 | ATGGCCCCTCAACTATGCAT | 59.144 | 50.000 | 3.79 | 3.79 | 0.00 | 3.96 |
659 | 660 | 1.517238 | TATGGCCCCTCAACTATGCA | 58.483 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
660 | 661 | 2.158608 | ACTTATGGCCCCTCAACTATGC | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 3.14 |
661 | 662 | 3.864789 | ACTTATGGCCCCTCAACTATG | 57.135 | 47.619 | 0.00 | 0.00 | 0.00 | 2.23 |
662 | 663 | 4.567857 | AGTACTTATGGCCCCTCAACTAT | 58.432 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
663 | 664 | 4.003584 | AGTACTTATGGCCCCTCAACTA | 57.996 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
665 | 666 | 3.646736 | AAGTACTTATGGCCCCTCAAC | 57.353 | 47.619 | 6.26 | 0.00 | 0.00 | 3.18 |
666 | 667 | 4.668138 | AAAAGTACTTATGGCCCCTCAA | 57.332 | 40.909 | 8.92 | 0.00 | 0.00 | 3.02 |
667 | 668 | 4.668138 | AAAAAGTACTTATGGCCCCTCA | 57.332 | 40.909 | 8.92 | 0.00 | 0.00 | 3.86 |
704 | 705 | 1.533731 | CAACGCCACACCTATCGTTTT | 59.466 | 47.619 | 0.00 | 0.00 | 42.32 | 2.43 |
705 | 706 | 1.153353 | CAACGCCACACCTATCGTTT | 58.847 | 50.000 | 0.00 | 0.00 | 42.32 | 3.60 |
706 | 707 | 0.319083 | TCAACGCCACACCTATCGTT | 59.681 | 50.000 | 0.00 | 0.00 | 44.62 | 3.85 |
707 | 708 | 0.319083 | TTCAACGCCACACCTATCGT | 59.681 | 50.000 | 0.00 | 0.00 | 36.67 | 3.73 |
722 | 3808 | 2.146342 | GCTGCTACTCTGCTTGTTCAA | 58.854 | 47.619 | 0.00 | 0.00 | 36.79 | 2.69 |
772 | 3861 | 3.372795 | TCGCAGACGTTGGTTTTCT | 57.627 | 47.368 | 0.00 | 0.00 | 41.18 | 2.52 |
786 | 3876 | 2.021722 | GAGCAAAACAGTGGTCGCA | 58.978 | 52.632 | 5.43 | 0.00 | 36.39 | 5.10 |
805 | 3895 | 1.621377 | GAGGGAGCCTGGAGGTCTA | 59.379 | 63.158 | 0.00 | 0.00 | 42.87 | 2.59 |
814 | 3904 | 3.406498 | AGGTTATATACAGGAGGGAGCCT | 59.594 | 47.826 | 0.00 | 0.00 | 39.37 | 4.58 |
815 | 3905 | 3.770388 | GAGGTTATATACAGGAGGGAGCC | 59.230 | 52.174 | 0.00 | 0.00 | 0.00 | 4.70 |
853 | 3958 | 2.771089 | TGCTTGTGTTGATGAGAGGAC | 58.229 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
919 | 4056 | 2.503356 | CCTGGAGATTGGTAGCTGAAGT | 59.497 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1077 | 4233 | 0.872021 | CGTAGTTCCATCGGCAGAGC | 60.872 | 60.000 | 0.00 | 0.00 | 0.00 | 4.09 |
1086 | 4242 | 0.617820 | ACCTGAGGGCGTAGTTCCAT | 60.618 | 55.000 | 2.38 | 0.00 | 35.63 | 3.41 |
1234 | 4390 | 3.735181 | GGTACATCACCGTCCTCAC | 57.265 | 57.895 | 0.00 | 0.00 | 37.63 | 3.51 |
1289 | 4445 | 2.806009 | GCCCCTCCTCAGCTAGCAG | 61.806 | 68.421 | 18.83 | 9.54 | 0.00 | 4.24 |
1298 | 4473 | 3.151022 | CGTCCTCAGCCCCTCCTC | 61.151 | 72.222 | 0.00 | 0.00 | 0.00 | 3.71 |
1299 | 4474 | 4.787280 | CCGTCCTCAGCCCCTCCT | 62.787 | 72.222 | 0.00 | 0.00 | 0.00 | 3.69 |
1301 | 4476 | 3.775654 | CACCGTCCTCAGCCCCTC | 61.776 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
1302 | 4477 | 4.316823 | TCACCGTCCTCAGCCCCT | 62.317 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
1303 | 4478 | 4.083862 | GTCACCGTCCTCAGCCCC | 62.084 | 72.222 | 0.00 | 0.00 | 0.00 | 5.80 |
1304 | 4479 | 4.436998 | CGTCACCGTCCTCAGCCC | 62.437 | 72.222 | 0.00 | 0.00 | 0.00 | 5.19 |
1305 | 4480 | 2.338015 | TACGTCACCGTCCTCAGCC | 61.338 | 63.158 | 0.00 | 0.00 | 46.28 | 4.85 |
1306 | 4481 | 1.154073 | GTACGTCACCGTCCTCAGC | 60.154 | 63.158 | 0.00 | 0.00 | 46.28 | 4.26 |
1307 | 4482 | 1.505353 | GGTACGTCACCGTCCTCAG | 59.495 | 63.158 | 0.00 | 0.00 | 46.28 | 3.35 |
1308 | 4483 | 3.672293 | GGTACGTCACCGTCCTCA | 58.328 | 61.111 | 0.00 | 0.00 | 46.28 | 3.86 |
1316 | 4491 | 2.415625 | CCTAGCAGTTGAGGTACGTCAC | 60.416 | 54.545 | 17.44 | 12.46 | 0.00 | 3.67 |
1317 | 4492 | 1.816835 | CCTAGCAGTTGAGGTACGTCA | 59.183 | 52.381 | 14.05 | 14.05 | 0.00 | 4.35 |
1318 | 4493 | 1.469423 | GCCTAGCAGTTGAGGTACGTC | 60.469 | 57.143 | 8.63 | 8.63 | 35.08 | 4.34 |
1319 | 4494 | 0.531200 | GCCTAGCAGTTGAGGTACGT | 59.469 | 55.000 | 0.00 | 0.00 | 35.08 | 3.57 |
1320 | 4495 | 0.525668 | CGCCTAGCAGTTGAGGTACG | 60.526 | 60.000 | 0.00 | 0.00 | 35.08 | 3.67 |
1321 | 4496 | 0.531200 | ACGCCTAGCAGTTGAGGTAC | 59.469 | 55.000 | 0.00 | 0.00 | 35.08 | 3.34 |
1322 | 4497 | 0.530744 | CACGCCTAGCAGTTGAGGTA | 59.469 | 55.000 | 0.00 | 0.00 | 35.08 | 3.08 |
1323 | 4498 | 1.293498 | CACGCCTAGCAGTTGAGGT | 59.707 | 57.895 | 0.00 | 0.00 | 35.08 | 3.85 |
1324 | 4499 | 0.737715 | GACACGCCTAGCAGTTGAGG | 60.738 | 60.000 | 0.00 | 0.00 | 35.78 | 3.86 |
1325 | 4500 | 0.244994 | AGACACGCCTAGCAGTTGAG | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1326 | 4501 | 0.243907 | GAGACACGCCTAGCAGTTGA | 59.756 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1327 | 4502 | 0.244994 | AGAGACACGCCTAGCAGTTG | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1328 | 4503 | 0.244994 | CAGAGACACGCCTAGCAGTT | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1329 | 4504 | 0.896019 | ACAGAGACACGCCTAGCAGT | 60.896 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
1330 | 4505 | 0.244994 | AACAGAGACACGCCTAGCAG | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
1331 | 4506 | 0.679505 | AAACAGAGACACGCCTAGCA | 59.320 | 50.000 | 0.00 | 0.00 | 0.00 | 3.49 |
1332 | 4507 | 1.071605 | CAAACAGAGACACGCCTAGC | 58.928 | 55.000 | 0.00 | 0.00 | 0.00 | 3.42 |
1333 | 4508 | 1.071605 | GCAAACAGAGACACGCCTAG | 58.928 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1334 | 4509 | 0.679505 | AGCAAACAGAGACACGCCTA | 59.320 | 50.000 | 0.00 | 0.00 | 0.00 | 3.93 |
1345 | 4520 | 3.737127 | TGGTTGTTGCAGCAAACAG | 57.263 | 47.368 | 27.56 | 0.00 | 40.67 | 3.16 |
1379 | 4554 | 1.794222 | CGATTCAACGGGAAGCCAC | 59.206 | 57.895 | 2.43 | 0.00 | 38.70 | 5.01 |
1391 | 4566 | 4.950475 | TGGTATTTTACAATGGGCGATTCA | 59.050 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
1397 | 4572 | 4.404073 | TCATGGTGGTATTTTACAATGGGC | 59.596 | 41.667 | 0.00 | 0.00 | 0.00 | 5.36 |
1483 | 4658 | 9.765795 | CCTCGAGAATAATTAATAAAGTGACCT | 57.234 | 33.333 | 15.71 | 0.00 | 0.00 | 3.85 |
1729 | 4904 | 8.865090 | AGATTCAATATAATCTGAAGACGGACT | 58.135 | 33.333 | 0.75 | 0.00 | 43.09 | 3.85 |
1798 | 4973 | 1.267121 | GAGGAGGTAGTTGTCTGGCA | 58.733 | 55.000 | 0.00 | 0.00 | 0.00 | 4.92 |
1952 | 5127 | 1.982395 | TCTGGCCGTGTCTCCGATT | 60.982 | 57.895 | 0.00 | 0.00 | 0.00 | 3.34 |
2202 | 5382 | 3.680786 | GAAACCCTTGGCCGCCAC | 61.681 | 66.667 | 13.00 | 0.00 | 30.78 | 5.01 |
2203 | 5383 | 4.986708 | GGAAACCCTTGGCCGCCA | 62.987 | 66.667 | 8.43 | 8.43 | 0.00 | 5.69 |
2256 | 5436 | 1.580942 | GCGCCTGCTGATTTTGTGA | 59.419 | 52.632 | 0.00 | 0.00 | 38.39 | 3.58 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.