Multiple sequence alignment - TraesCS2D01G526800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G526800 chr2D 100.000 4062 0 0 960 5021 614847553 614851614 0.000000e+00 7502.0
1 TraesCS2D01G526800 chr2D 100.000 660 0 0 1 660 614846594 614847253 0.000000e+00 1219.0
2 TraesCS2D01G526800 chr2D 77.807 383 29 33 993 1350 287143162 287143513 8.580000e-43 185.0
3 TraesCS2D01G526800 chr2D 95.238 63 2 1 2198 2259 614848744 614848806 1.150000e-16 99.0
4 TraesCS2D01G526800 chr2D 95.238 63 2 1 2151 2213 614848791 614848852 1.150000e-16 99.0
5 TraesCS2D01G526800 chr2B 98.241 1990 30 4 1274 3262 749233369 749235354 0.000000e+00 3476.0
6 TraesCS2D01G526800 chr2B 94.943 870 22 5 4163 5021 749235354 749236212 0.000000e+00 1343.0
7 TraesCS2D01G526800 chr2B 91.257 183 15 1 382 564 221879309 221879128 1.080000e-61 248.0
8 TraesCS2D01G526800 chr2B 95.238 63 2 1 2198 2259 749234243 749234305 1.150000e-16 99.0
9 TraesCS2D01G526800 chr2B 93.651 63 3 1 2151 2213 749234290 749234351 5.350000e-15 93.5
10 TraesCS2D01G526800 chr7B 88.824 689 56 13 3612 4293 6236254 6236928 0.000000e+00 826.0
11 TraesCS2D01G526800 chr7B 92.669 532 30 5 3092 3614 6235505 6236036 0.000000e+00 758.0
12 TraesCS2D01G526800 chr7B 82.231 529 58 19 1642 2144 6234066 6234584 1.670000e-114 424.0
13 TraesCS2D01G526800 chr7B 84.119 403 22 15 965 1343 6233338 6233722 8.000000e-93 351.0
14 TraesCS2D01G526800 chr7B 87.719 114 12 2 2661 2773 6235220 6235332 1.130000e-26 132.0
15 TraesCS2D01G526800 chr7B 97.872 47 0 1 332 377 6232978 6233024 4.170000e-11 80.5
16 TraesCS2D01G526800 chr7A 88.261 690 48 19 3615 4293 68882308 68882975 0.000000e+00 795.0
17 TraesCS2D01G526800 chr7A 93.045 532 28 3 3092 3614 68881559 68882090 0.000000e+00 769.0
18 TraesCS2D01G526800 chr7A 83.439 471 50 13 1698 2144 68880096 68880562 3.620000e-111 412.0
19 TraesCS2D01G526800 chr7A 83.784 407 21 16 965 1345 68879285 68879672 1.340000e-90 344.0
20 TraesCS2D01G526800 chr7A 91.724 145 8 4 235 377 68879075 68879217 1.100000e-46 198.0
21 TraesCS2D01G526800 chr7A 96.907 97 3 0 469 565 33728171 33728075 4.020000e-36 163.0
22 TraesCS2D01G526800 chr7A 100.000 38 0 0 378 415 506873685 506873648 2.510000e-08 71.3
23 TraesCS2D01G526800 chr7D 88.201 678 43 9 3350 4006 636967456 636966795 0.000000e+00 774.0
24 TraesCS2D01G526800 chr7D 82.278 395 21 17 965 1329 64702847 64703222 3.800000e-76 296.0
25 TraesCS2D01G526800 chr7D 84.706 255 17 9 135 377 64702541 64702785 8.400000e-58 235.0
26 TraesCS2D01G526800 chr7D 88.172 93 5 3 565 656 511217383 511217470 6.870000e-19 106.0
27 TraesCS2D01G526800 chr7D 78.125 160 16 11 1680 1836 64734806 64734663 3.220000e-12 84.2
28 TraesCS2D01G526800 chr4A 87.372 681 47 14 3347 4006 236227219 236227881 0.000000e+00 745.0
29 TraesCS2D01G526800 chr6A 86.716 670 66 10 3350 4006 443931366 443930707 0.000000e+00 723.0
30 TraesCS2D01G526800 chr6A 96.774 62 2 0 502 563 616885466 616885405 2.470000e-18 104.0
31 TraesCS2D01G526800 chr3A 85.567 679 69 13 3347 4006 608076313 608076981 0.000000e+00 684.0
32 TraesCS2D01G526800 chr3A 89.474 57 6 0 381 437 101652202 101652258 6.970000e-09 73.1
33 TraesCS2D01G526800 chrUn 92.405 237 12 3 1887 2118 100328385 100328150 2.900000e-87 333.0
34 TraesCS2D01G526800 chrUn 74.280 486 77 30 2210 2651 122426768 122427249 1.450000e-35 161.0
35 TraesCS2D01G526800 chr5B 77.601 567 92 21 2208 2749 65677 65121 1.360000e-80 311.0
36 TraesCS2D01G526800 chr5A 77.029 579 96 19 2196 2749 671809 672375 1.060000e-76 298.0
37 TraesCS2D01G526800 chr5A 74.490 490 70 30 2210 2651 675233 675715 1.450000e-35 161.0
38 TraesCS2D01G526800 chr5A 84.768 151 5 6 996 1130 129233264 129233116 8.770000e-28 135.0
39 TraesCS2D01G526800 chr5A 85.714 133 10 6 1218 1350 129232697 129232574 1.130000e-26 132.0
40 TraesCS2D01G526800 chr1A 94.681 188 5 2 382 564 513467551 513467738 2.290000e-73 287.0
41 TraesCS2D01G526800 chr1A 84.416 154 6 6 993 1130 505306219 505306370 8.770000e-28 135.0
42 TraesCS2D01G526800 chr1A 84.058 138 11 7 1218 1350 505306789 505306920 6.830000e-24 122.0
43 TraesCS2D01G526800 chr4B 81.346 327 23 15 3929 4233 673195875 673195565 1.090000e-56 231.0
44 TraesCS2D01G526800 chr4B 83.974 156 19 4 379 533 657291193 657291043 1.460000e-30 145.0
45 TraesCS2D01G526800 chr3D 77.519 387 28 29 993 1350 470481912 470482268 1.440000e-40 178.0
46 TraesCS2D01G526800 chr3D 81.457 151 23 3 381 530 85213544 85213690 8.830000e-23 119.0
47 TraesCS2D01G526800 chr2A 81.959 194 26 7 381 566 778725662 778725470 6.730000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G526800 chr2D 614846594 614851614 5020 False 2229.750000 7502 97.619000 1 5021 4 chr2D.!!$F2 5020
1 TraesCS2D01G526800 chr2B 749233369 749236212 2843 False 1252.875000 3476 95.518250 1274 5021 4 chr2B.!!$F1 3747
2 TraesCS2D01G526800 chr7B 6232978 6236928 3950 False 428.583333 826 88.905667 332 4293 6 chr7B.!!$F1 3961
3 TraesCS2D01G526800 chr7A 68879075 68882975 3900 False 503.600000 795 88.050600 235 4293 5 chr7A.!!$F1 4058
4 TraesCS2D01G526800 chr7D 636966795 636967456 661 True 774.000000 774 88.201000 3350 4006 1 chr7D.!!$R2 656
5 TraesCS2D01G526800 chr7D 64702541 64703222 681 False 265.500000 296 83.492000 135 1329 2 chr7D.!!$F2 1194
6 TraesCS2D01G526800 chr4A 236227219 236227881 662 False 745.000000 745 87.372000 3347 4006 1 chr4A.!!$F1 659
7 TraesCS2D01G526800 chr6A 443930707 443931366 659 True 723.000000 723 86.716000 3350 4006 1 chr6A.!!$R1 656
8 TraesCS2D01G526800 chr3A 608076313 608076981 668 False 684.000000 684 85.567000 3347 4006 1 chr3A.!!$F2 659
9 TraesCS2D01G526800 chr5B 65121 65677 556 True 311.000000 311 77.601000 2208 2749 1 chr5B.!!$R1 541
10 TraesCS2D01G526800 chr5A 671809 675715 3906 False 229.500000 298 75.759500 2196 2749 2 chr5A.!!$F1 553

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
276 295 0.034059 AGGCTCAACTTGAGTGACCG 59.966 55.000 18.16 0.0 45.94 4.79 F
406 428 0.034896 CCTAGACACACGGGCAGTTT 59.965 55.000 0.00 0.0 0.00 2.66 F
1416 1813 0.035630 AGGTTTGGCAGCTGCTAGAG 60.036 55.000 35.82 0.0 41.70 2.43 F
2796 3497 0.244721 GTCCTGGCATTTTCACTGGC 59.755 55.000 0.00 0.0 39.47 4.85 F
3411 4702 3.424829 CGATGGATGTCGTGTCAAAAAGG 60.425 47.826 0.00 0.0 36.88 3.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1155 1418 0.106419 TTCCTCCACCAAACCCACAC 60.106 55.000 0.00 0.0 0.00 3.82 R
1690 2101 4.487948 CGAATGAACTGAAACAATGGCAT 58.512 39.130 0.00 0.0 0.00 4.40 R
3326 4617 3.328931 TGGAGATTCTTCCACTTGCTTCT 59.671 43.478 1.98 0.0 42.24 2.85 R
3705 5263 0.036105 ATGCATGAGACGAGTGCCAA 60.036 50.000 0.00 0.0 38.06 4.52 R
4463 7776 0.038166 ACGGCTGTGAATGAATGGGT 59.962 50.000 0.00 0.0 0.00 4.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 4.465512 CGGATGGCTGCGTTGCAC 62.466 66.667 0.00 0.00 33.79 4.57
37 38 4.465512 GGATGGCTGCGTTGCACG 62.466 66.667 4.61 4.61 45.88 5.34
53 54 3.745723 ACGCAAGGGATTTTGAGGT 57.254 47.368 0.00 0.00 46.39 3.85
54 55 1.247567 ACGCAAGGGATTTTGAGGTG 58.752 50.000 0.00 0.00 46.39 4.00
55 56 0.527565 CGCAAGGGATTTTGAGGTGG 59.472 55.000 0.00 0.00 0.00 4.61
56 57 0.897621 GCAAGGGATTTTGAGGTGGG 59.102 55.000 0.00 0.00 0.00 4.61
57 58 1.560505 CAAGGGATTTTGAGGTGGGG 58.439 55.000 0.00 0.00 0.00 4.96
58 59 1.077005 CAAGGGATTTTGAGGTGGGGA 59.923 52.381 0.00 0.00 0.00 4.81
59 60 1.698874 AGGGATTTTGAGGTGGGGAT 58.301 50.000 0.00 0.00 0.00 3.85
60 61 2.871796 AGGGATTTTGAGGTGGGGATA 58.128 47.619 0.00 0.00 0.00 2.59
61 62 3.206464 AGGGATTTTGAGGTGGGGATAA 58.794 45.455 0.00 0.00 0.00 1.75
62 63 3.205282 AGGGATTTTGAGGTGGGGATAAG 59.795 47.826 0.00 0.00 0.00 1.73
63 64 3.204382 GGGATTTTGAGGTGGGGATAAGA 59.796 47.826 0.00 0.00 0.00 2.10
64 65 4.325816 GGGATTTTGAGGTGGGGATAAGAA 60.326 45.833 0.00 0.00 0.00 2.52
65 66 5.269189 GGATTTTGAGGTGGGGATAAGAAA 58.731 41.667 0.00 0.00 0.00 2.52
66 67 5.899547 GGATTTTGAGGTGGGGATAAGAAAT 59.100 40.000 0.00 0.00 0.00 2.17
67 68 6.384015 GGATTTTGAGGTGGGGATAAGAAATT 59.616 38.462 0.00 0.00 0.00 1.82
68 69 7.092891 GGATTTTGAGGTGGGGATAAGAAATTT 60.093 37.037 0.00 0.00 0.00 1.82
69 70 6.603940 TTTGAGGTGGGGATAAGAAATTTG 57.396 37.500 0.00 0.00 0.00 2.32
70 71 4.609301 TGAGGTGGGGATAAGAAATTTGG 58.391 43.478 0.00 0.00 0.00 3.28
71 72 3.960755 GAGGTGGGGATAAGAAATTTGGG 59.039 47.826 0.00 0.00 0.00 4.12
72 73 3.038280 GGTGGGGATAAGAAATTTGGGG 58.962 50.000 0.00 0.00 0.00 4.96
73 74 2.434336 GTGGGGATAAGAAATTTGGGGC 59.566 50.000 0.00 0.00 0.00 5.80
74 75 1.686587 GGGGATAAGAAATTTGGGGCG 59.313 52.381 0.00 0.00 0.00 6.13
75 76 1.686587 GGGATAAGAAATTTGGGGCGG 59.313 52.381 0.00 0.00 0.00 6.13
76 77 1.686587 GGATAAGAAATTTGGGGCGGG 59.313 52.381 0.00 0.00 0.00 6.13
77 78 1.686587 GATAAGAAATTTGGGGCGGGG 59.313 52.381 0.00 0.00 0.00 5.73
78 79 0.705253 TAAGAAATTTGGGGCGGGGA 59.295 50.000 0.00 0.00 0.00 4.81
79 80 0.178918 AAGAAATTTGGGGCGGGGAA 60.179 50.000 0.00 0.00 0.00 3.97
80 81 0.614697 AGAAATTTGGGGCGGGGAAG 60.615 55.000 0.00 0.00 0.00 3.46
81 82 1.612146 AAATTTGGGGCGGGGAAGG 60.612 57.895 0.00 0.00 0.00 3.46
82 83 3.617166 AATTTGGGGCGGGGAAGGG 62.617 63.158 0.00 0.00 0.00 3.95
86 87 3.751018 GGGGCGGGGAAGGGATTT 61.751 66.667 0.00 0.00 0.00 2.17
87 88 2.442087 GGGCGGGGAAGGGATTTG 60.442 66.667 0.00 0.00 0.00 2.32
88 89 2.442087 GGCGGGGAAGGGATTTGG 60.442 66.667 0.00 0.00 0.00 3.28
89 90 3.147595 GCGGGGAAGGGATTTGGC 61.148 66.667 0.00 0.00 0.00 4.52
90 91 2.358619 CGGGGAAGGGATTTGGCA 59.641 61.111 0.00 0.00 0.00 4.92
91 92 1.304879 CGGGGAAGGGATTTGGCAA 60.305 57.895 0.00 0.00 0.00 4.52
92 93 0.687427 CGGGGAAGGGATTTGGCAAT 60.687 55.000 0.00 0.00 0.00 3.56
93 94 1.583556 GGGGAAGGGATTTGGCAATT 58.416 50.000 0.00 0.00 0.00 2.32
94 95 1.915489 GGGGAAGGGATTTGGCAATTT 59.085 47.619 0.00 0.00 0.00 1.82
95 96 2.308570 GGGGAAGGGATTTGGCAATTTT 59.691 45.455 0.00 0.00 0.00 1.82
96 97 3.521531 GGGGAAGGGATTTGGCAATTTTA 59.478 43.478 0.00 0.00 0.00 1.52
97 98 4.513442 GGGAAGGGATTTGGCAATTTTAC 58.487 43.478 0.00 0.00 0.00 2.01
98 99 4.019771 GGGAAGGGATTTGGCAATTTTACA 60.020 41.667 0.00 0.00 0.00 2.41
99 100 4.935205 GGAAGGGATTTGGCAATTTTACAC 59.065 41.667 0.00 0.00 0.00 2.90
100 101 5.279960 GGAAGGGATTTGGCAATTTTACACT 60.280 40.000 0.00 0.00 0.00 3.55
101 102 6.071051 GGAAGGGATTTGGCAATTTTACACTA 60.071 38.462 0.00 0.00 0.00 2.74
102 103 6.926630 AGGGATTTGGCAATTTTACACTAA 57.073 33.333 0.00 0.00 0.00 2.24
103 104 7.494922 AGGGATTTGGCAATTTTACACTAAT 57.505 32.000 0.00 0.00 0.00 1.73
104 105 7.555965 AGGGATTTGGCAATTTTACACTAATC 58.444 34.615 0.00 0.00 0.00 1.75
105 106 7.180051 AGGGATTTGGCAATTTTACACTAATCA 59.820 33.333 0.00 0.00 0.00 2.57
106 107 7.277760 GGGATTTGGCAATTTTACACTAATCAC 59.722 37.037 0.00 0.00 0.00 3.06
107 108 7.277760 GGATTTGGCAATTTTACACTAATCACC 59.722 37.037 0.00 0.00 0.00 4.02
108 109 5.652994 TGGCAATTTTACACTAATCACCC 57.347 39.130 0.00 0.00 0.00 4.61
109 110 4.464597 TGGCAATTTTACACTAATCACCCC 59.535 41.667 0.00 0.00 0.00 4.95
110 111 4.709886 GGCAATTTTACACTAATCACCCCT 59.290 41.667 0.00 0.00 0.00 4.79
111 112 5.186992 GGCAATTTTACACTAATCACCCCTT 59.813 40.000 0.00 0.00 0.00 3.95
112 113 6.099341 GCAATTTTACACTAATCACCCCTTG 58.901 40.000 0.00 0.00 0.00 3.61
113 114 5.914898 ATTTTACACTAATCACCCCTTGC 57.085 39.130 0.00 0.00 0.00 4.01
114 115 4.374689 TTTACACTAATCACCCCTTGCA 57.625 40.909 0.00 0.00 0.00 4.08
115 116 2.969821 ACACTAATCACCCCTTGCAA 57.030 45.000 0.00 0.00 0.00 4.08
116 117 2.795329 ACACTAATCACCCCTTGCAAG 58.205 47.619 19.93 19.93 0.00 4.01
117 118 2.108250 ACACTAATCACCCCTTGCAAGT 59.892 45.455 24.35 4.78 0.00 3.16
118 119 3.329520 ACACTAATCACCCCTTGCAAGTA 59.670 43.478 24.35 7.96 0.00 2.24
119 120 4.018415 ACACTAATCACCCCTTGCAAGTAT 60.018 41.667 24.35 7.09 0.00 2.12
120 121 4.576463 CACTAATCACCCCTTGCAAGTATC 59.424 45.833 24.35 0.00 0.00 2.24
121 122 3.737559 AATCACCCCTTGCAAGTATCA 57.262 42.857 24.35 5.36 0.00 2.15
122 123 2.489938 TCACCCCTTGCAAGTATCAC 57.510 50.000 24.35 0.00 0.00 3.06
123 124 1.985159 TCACCCCTTGCAAGTATCACT 59.015 47.619 24.35 0.00 0.00 3.41
124 125 2.086869 CACCCCTTGCAAGTATCACTG 58.913 52.381 24.35 7.60 0.00 3.66
125 126 1.985159 ACCCCTTGCAAGTATCACTGA 59.015 47.619 24.35 0.00 0.00 3.41
126 127 2.375174 ACCCCTTGCAAGTATCACTGAA 59.625 45.455 24.35 0.00 0.00 3.02
127 128 3.010584 ACCCCTTGCAAGTATCACTGAAT 59.989 43.478 24.35 0.00 0.00 2.57
128 129 3.629398 CCCCTTGCAAGTATCACTGAATC 59.371 47.826 24.35 0.00 0.00 2.52
129 130 4.264253 CCCTTGCAAGTATCACTGAATCA 58.736 43.478 24.35 0.00 0.00 2.57
130 131 4.095483 CCCTTGCAAGTATCACTGAATCAC 59.905 45.833 24.35 0.00 0.00 3.06
131 132 4.696877 CCTTGCAAGTATCACTGAATCACA 59.303 41.667 24.35 0.00 0.00 3.58
132 133 5.181811 CCTTGCAAGTATCACTGAATCACAA 59.818 40.000 24.35 0.00 0.00 3.33
133 134 5.611796 TGCAAGTATCACTGAATCACAAC 57.388 39.130 0.00 0.00 0.00 3.32
140 141 7.773149 AGTATCACTGAATCACAACTACCTAC 58.227 38.462 0.00 0.00 0.00 3.18
145 146 6.014647 ACTGAATCACAACTACCTACCTACA 58.985 40.000 0.00 0.00 0.00 2.74
195 196 6.471976 AGCGTTATATGTGCAATAGTGATG 57.528 37.500 0.00 0.00 0.00 3.07
219 220 1.382419 CAATCACGTCACGTCGTCTTC 59.618 52.381 0.00 0.00 42.27 2.87
221 222 1.501169 TCACGTCACGTCGTCTTCTA 58.499 50.000 0.00 0.00 42.27 2.10
227 228 6.035975 TCACGTCACGTCGTCTTCTATTATTA 59.964 38.462 0.00 0.00 42.27 0.98
229 230 8.006027 CACGTCACGTCGTCTTCTATTATTATA 58.994 37.037 0.00 0.00 42.27 0.98
230 231 8.715998 ACGTCACGTCGTCTTCTATTATTATAT 58.284 33.333 0.00 0.00 40.04 0.86
231 232 9.539139 CGTCACGTCGTCTTCTATTATTATATT 57.461 33.333 0.00 0.00 0.00 1.28
253 264 6.767524 TTGATACAAGGACTGTTTTTGTGT 57.232 33.333 16.29 11.86 39.64 3.72
259 270 4.718940 AGGACTGTTTTTGTGTTTCAGG 57.281 40.909 0.00 0.00 0.00 3.86
269 288 2.997980 TGTGTTTCAGGCTCAACTTGA 58.002 42.857 7.44 0.00 0.00 3.02
270 289 2.945008 TGTGTTTCAGGCTCAACTTGAG 59.055 45.455 13.68 13.68 46.90 3.02
271 290 2.945668 GTGTTTCAGGCTCAACTTGAGT 59.054 45.455 18.16 0.00 45.94 3.41
272 291 2.945008 TGTTTCAGGCTCAACTTGAGTG 59.055 45.455 18.16 10.77 45.94 3.51
273 292 3.206150 GTTTCAGGCTCAACTTGAGTGA 58.794 45.455 18.16 12.63 45.94 3.41
274 293 2.533266 TCAGGCTCAACTTGAGTGAC 57.467 50.000 18.16 10.24 45.94 3.67
275 294 1.070758 TCAGGCTCAACTTGAGTGACC 59.929 52.381 18.16 11.80 45.94 4.02
276 295 0.034059 AGGCTCAACTTGAGTGACCG 59.966 55.000 18.16 0.00 45.94 4.79
289 308 6.040166 ACTTGAGTGACCGTCGGTATATTTAT 59.960 38.462 18.88 0.00 35.25 1.40
393 415 1.664873 GGCCACCGAAAATCCTAGAC 58.335 55.000 0.00 0.00 0.00 2.59
394 416 1.065709 GGCCACCGAAAATCCTAGACA 60.066 52.381 0.00 0.00 0.00 3.41
395 417 2.007608 GCCACCGAAAATCCTAGACAC 58.992 52.381 0.00 0.00 0.00 3.67
396 418 2.614481 GCCACCGAAAATCCTAGACACA 60.614 50.000 0.00 0.00 0.00 3.72
397 419 3.000727 CCACCGAAAATCCTAGACACAC 58.999 50.000 0.00 0.00 0.00 3.82
398 420 2.666508 CACCGAAAATCCTAGACACACG 59.333 50.000 0.00 0.00 0.00 4.49
399 421 2.268298 CCGAAAATCCTAGACACACGG 58.732 52.381 0.00 0.00 0.00 4.94
400 422 2.268298 CGAAAATCCTAGACACACGGG 58.732 52.381 0.00 0.00 0.00 5.28
401 423 2.007608 GAAAATCCTAGACACACGGGC 58.992 52.381 0.00 0.00 0.00 6.13
402 424 0.981183 AAATCCTAGACACACGGGCA 59.019 50.000 0.00 0.00 0.00 5.36
403 425 0.537188 AATCCTAGACACACGGGCAG 59.463 55.000 0.00 0.00 0.00 4.85
404 426 0.614979 ATCCTAGACACACGGGCAGT 60.615 55.000 0.00 0.00 0.00 4.40
405 427 0.830444 TCCTAGACACACGGGCAGTT 60.830 55.000 0.00 0.00 0.00 3.16
406 428 0.034896 CCTAGACACACGGGCAGTTT 59.965 55.000 0.00 0.00 0.00 2.66
407 429 1.274167 CCTAGACACACGGGCAGTTTA 59.726 52.381 0.00 0.00 0.00 2.01
408 430 2.334838 CTAGACACACGGGCAGTTTAC 58.665 52.381 0.00 0.00 0.00 2.01
409 431 0.756903 AGACACACGGGCAGTTTACT 59.243 50.000 0.00 0.00 0.00 2.24
410 432 1.140252 AGACACACGGGCAGTTTACTT 59.860 47.619 0.00 0.00 0.00 2.24
411 433 2.366266 AGACACACGGGCAGTTTACTTA 59.634 45.455 0.00 0.00 0.00 2.24
412 434 2.735134 GACACACGGGCAGTTTACTTAG 59.265 50.000 0.00 0.00 0.00 2.18
413 435 1.463444 CACACGGGCAGTTTACTTAGC 59.537 52.381 0.00 0.00 0.00 3.09
414 436 1.071071 ACACGGGCAGTTTACTTAGCA 59.929 47.619 0.00 0.00 0.00 3.49
415 437 2.147958 CACGGGCAGTTTACTTAGCAA 58.852 47.619 0.00 0.00 0.00 3.91
416 438 2.747446 CACGGGCAGTTTACTTAGCAAT 59.253 45.455 0.00 0.00 0.00 3.56
417 439 3.936453 CACGGGCAGTTTACTTAGCAATA 59.064 43.478 0.00 0.00 0.00 1.90
418 440 3.937079 ACGGGCAGTTTACTTAGCAATAC 59.063 43.478 0.00 0.00 0.00 1.89
419 441 3.000925 CGGGCAGTTTACTTAGCAATACG 59.999 47.826 0.00 0.00 0.00 3.06
420 442 3.311596 GGGCAGTTTACTTAGCAATACGG 59.688 47.826 0.00 0.00 0.00 4.02
421 443 4.186159 GGCAGTTTACTTAGCAATACGGA 58.814 43.478 0.00 0.00 0.00 4.69
422 444 4.033702 GGCAGTTTACTTAGCAATACGGAC 59.966 45.833 0.00 0.00 0.00 4.79
423 445 4.868734 GCAGTTTACTTAGCAATACGGACT 59.131 41.667 0.00 0.00 0.00 3.85
424 446 5.005490 GCAGTTTACTTAGCAATACGGACTC 59.995 44.000 0.00 0.00 0.00 3.36
425 447 6.331061 CAGTTTACTTAGCAATACGGACTCT 58.669 40.000 0.00 0.00 0.00 3.24
426 448 6.812160 CAGTTTACTTAGCAATACGGACTCTT 59.188 38.462 0.00 0.00 0.00 2.85
427 449 7.331193 CAGTTTACTTAGCAATACGGACTCTTT 59.669 37.037 0.00 0.00 0.00 2.52
428 450 7.544915 AGTTTACTTAGCAATACGGACTCTTTC 59.455 37.037 0.00 0.00 0.00 2.62
429 451 4.756502 ACTTAGCAATACGGACTCTTTCC 58.243 43.478 0.00 0.00 41.75 3.13
430 452 4.222145 ACTTAGCAATACGGACTCTTTCCA 59.778 41.667 0.00 0.00 46.29 3.53
431 453 3.695830 AGCAATACGGACTCTTTCCAA 57.304 42.857 0.00 0.00 46.29 3.53
432 454 4.015872 AGCAATACGGACTCTTTCCAAA 57.984 40.909 0.00 0.00 46.29 3.28
433 455 3.751698 AGCAATACGGACTCTTTCCAAAC 59.248 43.478 0.00 0.00 46.29 2.93
434 456 3.751698 GCAATACGGACTCTTTCCAAACT 59.248 43.478 0.00 0.00 46.29 2.66
435 457 4.933400 GCAATACGGACTCTTTCCAAACTA 59.067 41.667 0.00 0.00 46.29 2.24
436 458 5.163884 GCAATACGGACTCTTTCCAAACTAC 60.164 44.000 0.00 0.00 46.29 2.73
437 459 5.997384 ATACGGACTCTTTCCAAACTACT 57.003 39.130 0.00 0.00 46.29 2.57
438 460 4.254402 ACGGACTCTTTCCAAACTACTC 57.746 45.455 0.00 0.00 46.29 2.59
439 461 3.896272 ACGGACTCTTTCCAAACTACTCT 59.104 43.478 0.00 0.00 46.29 3.24
440 462 4.344390 ACGGACTCTTTCCAAACTACTCTT 59.656 41.667 0.00 0.00 46.29 2.85
441 463 4.924462 CGGACTCTTTCCAAACTACTCTTC 59.076 45.833 0.00 0.00 46.29 2.87
442 464 5.239351 GGACTCTTTCCAAACTACTCTTCC 58.761 45.833 0.00 0.00 45.10 3.46
443 465 5.230323 ACTCTTTCCAAACTACTCTTCCC 57.770 43.478 0.00 0.00 0.00 3.97
444 466 4.041815 ACTCTTTCCAAACTACTCTTCCCC 59.958 45.833 0.00 0.00 0.00 4.81
445 467 3.329814 TCTTTCCAAACTACTCTTCCCCC 59.670 47.826 0.00 0.00 0.00 5.40
446 468 2.735259 TCCAAACTACTCTTCCCCCT 57.265 50.000 0.00 0.00 0.00 4.79
447 469 2.547990 TCCAAACTACTCTTCCCCCTC 58.452 52.381 0.00 0.00 0.00 4.30
448 470 1.560146 CCAAACTACTCTTCCCCCTCC 59.440 57.143 0.00 0.00 0.00 4.30
449 471 1.560146 CAAACTACTCTTCCCCCTCCC 59.440 57.143 0.00 0.00 0.00 4.30
450 472 0.044397 AACTACTCTTCCCCCTCCCC 59.956 60.000 0.00 0.00 0.00 4.81
451 473 1.074395 CTACTCTTCCCCCTCCCCC 60.074 68.421 0.00 0.00 0.00 5.40
470 492 4.743018 CTGATTTTCAGGGCGGGT 57.257 55.556 0.00 0.00 40.71 5.28
471 493 2.183409 CTGATTTTCAGGGCGGGTG 58.817 57.895 0.00 0.00 40.71 4.61
472 494 1.304052 TGATTTTCAGGGCGGGTGG 60.304 57.895 0.00 0.00 0.00 4.61
473 495 2.037208 ATTTTCAGGGCGGGTGGG 59.963 61.111 0.00 0.00 0.00 4.61
474 496 4.986708 TTTTCAGGGCGGGTGGGC 62.987 66.667 0.00 0.00 41.35 5.36
484 506 4.280019 GGGTGGGCCCGTGAGTTT 62.280 66.667 19.37 0.00 46.51 2.66
485 507 2.751688 GGTGGGCCCGTGAGTTTA 59.248 61.111 19.37 0.00 0.00 2.01
486 508 1.301954 GGTGGGCCCGTGAGTTTAT 59.698 57.895 19.37 0.00 0.00 1.40
487 509 0.323087 GGTGGGCCCGTGAGTTTATT 60.323 55.000 19.37 0.00 0.00 1.40
488 510 1.541379 GTGGGCCCGTGAGTTTATTT 58.459 50.000 19.37 0.00 0.00 1.40
489 511 1.471287 GTGGGCCCGTGAGTTTATTTC 59.529 52.381 19.37 0.00 0.00 2.17
490 512 1.353022 TGGGCCCGTGAGTTTATTTCT 59.647 47.619 19.37 0.00 0.00 2.52
491 513 2.572556 TGGGCCCGTGAGTTTATTTCTA 59.427 45.455 19.37 0.00 0.00 2.10
492 514 3.201266 TGGGCCCGTGAGTTTATTTCTAT 59.799 43.478 19.37 0.00 0.00 1.98
493 515 3.813724 GGGCCCGTGAGTTTATTTCTATC 59.186 47.826 5.69 0.00 0.00 2.08
494 516 3.813724 GGCCCGTGAGTTTATTTCTATCC 59.186 47.826 0.00 0.00 0.00 2.59
495 517 4.448210 GCCCGTGAGTTTATTTCTATCCA 58.552 43.478 0.00 0.00 0.00 3.41
496 518 4.511826 GCCCGTGAGTTTATTTCTATCCAG 59.488 45.833 0.00 0.00 0.00 3.86
497 519 5.671493 CCCGTGAGTTTATTTCTATCCAGT 58.329 41.667 0.00 0.00 0.00 4.00
498 520 5.753921 CCCGTGAGTTTATTTCTATCCAGTC 59.246 44.000 0.00 0.00 0.00 3.51
499 521 6.338146 CCGTGAGTTTATTTCTATCCAGTCA 58.662 40.000 0.00 0.00 0.00 3.41
500 522 6.816640 CCGTGAGTTTATTTCTATCCAGTCAA 59.183 38.462 0.00 0.00 0.00 3.18
501 523 7.333423 CCGTGAGTTTATTTCTATCCAGTCAAA 59.667 37.037 0.00 0.00 0.00 2.69
502 524 8.717821 CGTGAGTTTATTTCTATCCAGTCAAAA 58.282 33.333 0.00 0.00 0.00 2.44
507 529 9.508567 GTTTATTTCTATCCAGTCAAAATCAGC 57.491 33.333 0.00 0.00 0.00 4.26
508 530 6.705863 ATTTCTATCCAGTCAAAATCAGCC 57.294 37.500 0.00 0.00 0.00 4.85
509 531 4.842531 TCTATCCAGTCAAAATCAGCCA 57.157 40.909 0.00 0.00 0.00 4.75
510 532 4.774124 TCTATCCAGTCAAAATCAGCCAG 58.226 43.478 0.00 0.00 0.00 4.85
511 533 1.538047 TCCAGTCAAAATCAGCCAGC 58.462 50.000 0.00 0.00 0.00 4.85
512 534 1.074405 TCCAGTCAAAATCAGCCAGCT 59.926 47.619 0.00 0.00 0.00 4.24
513 535 2.305635 TCCAGTCAAAATCAGCCAGCTA 59.694 45.455 0.00 0.00 0.00 3.32
514 536 3.084039 CCAGTCAAAATCAGCCAGCTAA 58.916 45.455 0.00 0.00 0.00 3.09
515 537 3.128242 CCAGTCAAAATCAGCCAGCTAAG 59.872 47.826 0.00 0.00 0.00 2.18
516 538 2.751806 AGTCAAAATCAGCCAGCTAAGC 59.248 45.455 0.00 0.00 0.00 3.09
517 539 2.094675 TCAAAATCAGCCAGCTAAGCC 58.905 47.619 4.36 0.00 0.00 4.35
518 540 1.820519 CAAAATCAGCCAGCTAAGCCA 59.179 47.619 4.36 0.00 0.00 4.75
519 541 1.467920 AAATCAGCCAGCTAAGCCAC 58.532 50.000 4.36 0.00 0.00 5.01
520 542 0.622665 AATCAGCCAGCTAAGCCACT 59.377 50.000 4.36 0.00 0.00 4.00
521 543 0.179936 ATCAGCCAGCTAAGCCACTC 59.820 55.000 4.36 0.00 0.00 3.51
522 544 1.451028 CAGCCAGCTAAGCCACTCC 60.451 63.158 4.36 0.00 0.00 3.85
523 545 2.512515 GCCAGCTAAGCCACTCCG 60.513 66.667 0.00 0.00 0.00 4.63
524 546 2.982130 CCAGCTAAGCCACTCCGT 59.018 61.111 0.00 0.00 0.00 4.69
525 547 1.956629 GCCAGCTAAGCCACTCCGTA 61.957 60.000 0.00 0.00 0.00 4.02
526 548 0.535335 CCAGCTAAGCCACTCCGTAA 59.465 55.000 0.00 0.00 0.00 3.18
527 549 1.139058 CCAGCTAAGCCACTCCGTAAT 59.861 52.381 0.00 0.00 0.00 1.89
528 550 2.364324 CCAGCTAAGCCACTCCGTAATA 59.636 50.000 0.00 0.00 0.00 0.98
529 551 3.381949 CAGCTAAGCCACTCCGTAATAC 58.618 50.000 0.00 0.00 0.00 1.89
530 552 2.364647 AGCTAAGCCACTCCGTAATACC 59.635 50.000 0.00 0.00 0.00 2.73
531 553 2.547430 GCTAAGCCACTCCGTAATACCC 60.547 54.545 0.00 0.00 0.00 3.69
532 554 1.575419 AAGCCACTCCGTAATACCCA 58.425 50.000 0.00 0.00 0.00 4.51
533 555 1.120530 AGCCACTCCGTAATACCCAG 58.879 55.000 0.00 0.00 0.00 4.45
534 556 0.828677 GCCACTCCGTAATACCCAGT 59.171 55.000 0.00 0.00 0.00 4.00
535 557 2.034124 GCCACTCCGTAATACCCAGTA 58.966 52.381 0.00 0.00 0.00 2.74
536 558 2.431782 GCCACTCCGTAATACCCAGTAA 59.568 50.000 0.00 0.00 0.00 2.24
537 559 3.118665 GCCACTCCGTAATACCCAGTAAA 60.119 47.826 0.00 0.00 0.00 2.01
538 560 4.623647 GCCACTCCGTAATACCCAGTAAAA 60.624 45.833 0.00 0.00 0.00 1.52
539 561 5.490159 CCACTCCGTAATACCCAGTAAAAA 58.510 41.667 0.00 0.00 0.00 1.94
540 562 6.117488 CCACTCCGTAATACCCAGTAAAAAT 58.883 40.000 0.00 0.00 0.00 1.82
541 563 7.274447 CCACTCCGTAATACCCAGTAAAAATA 58.726 38.462 0.00 0.00 0.00 1.40
542 564 7.935210 CCACTCCGTAATACCCAGTAAAAATAT 59.065 37.037 0.00 0.00 0.00 1.28
543 565 9.333724 CACTCCGTAATACCCAGTAAAAATATT 57.666 33.333 0.00 0.00 0.00 1.28
544 566 9.551734 ACTCCGTAATACCCAGTAAAAATATTC 57.448 33.333 0.00 0.00 0.00 1.75
545 567 8.907222 TCCGTAATACCCAGTAAAAATATTCC 57.093 34.615 0.00 0.00 0.00 3.01
546 568 7.656948 TCCGTAATACCCAGTAAAAATATTCCG 59.343 37.037 0.00 0.00 0.00 4.30
547 569 7.442062 CCGTAATACCCAGTAAAAATATTCCGT 59.558 37.037 0.00 0.00 0.00 4.69
548 570 8.277713 CGTAATACCCAGTAAAAATATTCCGTG 58.722 37.037 0.00 0.00 0.00 4.94
549 571 4.976224 ACCCAGTAAAAATATTCCGTGC 57.024 40.909 0.00 0.00 0.00 5.34
550 572 3.375922 ACCCAGTAAAAATATTCCGTGCG 59.624 43.478 0.00 0.00 0.00 5.34
551 573 3.375922 CCCAGTAAAAATATTCCGTGCGT 59.624 43.478 0.00 0.00 0.00 5.24
552 574 4.339429 CCAGTAAAAATATTCCGTGCGTG 58.661 43.478 0.00 0.00 0.00 5.34
553 575 4.142773 CCAGTAAAAATATTCCGTGCGTGT 60.143 41.667 0.00 0.00 0.00 4.49
554 576 5.063691 CCAGTAAAAATATTCCGTGCGTGTA 59.936 40.000 0.00 0.00 0.00 2.90
555 577 6.182634 CAGTAAAAATATTCCGTGCGTGTAG 58.817 40.000 0.00 0.00 0.00 2.74
566 588 3.589982 CGTGTAGCATCGCTCGTC 58.410 61.111 0.00 0.00 40.44 4.20
567 589 2.279580 CGTGTAGCATCGCTCGTCG 61.280 63.158 0.00 0.00 40.44 5.12
568 590 1.939785 GTGTAGCATCGCTCGTCGG 60.940 63.158 0.00 0.00 40.44 4.79
569 591 3.025176 GTAGCATCGCTCGTCGGC 61.025 66.667 0.00 0.00 40.44 5.54
570 592 4.266070 TAGCATCGCTCGTCGGCC 62.266 66.667 0.00 0.00 40.44 6.13
585 825 3.297620 GCCACAGCCCACAAGGTG 61.298 66.667 0.00 0.00 41.06 4.00
586 826 2.515398 CCACAGCCCACAAGGTGA 59.485 61.111 0.00 0.00 38.61 4.02
587 827 1.601759 CCACAGCCCACAAGGTGAG 60.602 63.158 0.00 0.00 38.61 3.51
588 828 1.451504 CACAGCCCACAAGGTGAGA 59.548 57.895 0.00 0.00 38.61 3.27
614 854 4.475527 GGCCTGGCCCGTATAAAG 57.524 61.111 27.77 0.00 44.06 1.85
615 855 1.530283 GGCCTGGCCCGTATAAAGT 59.470 57.895 27.77 0.00 44.06 2.66
616 856 0.760572 GGCCTGGCCCGTATAAAGTA 59.239 55.000 27.77 0.00 44.06 2.24
617 857 1.270678 GGCCTGGCCCGTATAAAGTAG 60.271 57.143 27.77 0.00 44.06 2.57
618 858 1.415289 GCCTGGCCCGTATAAAGTAGT 59.585 52.381 7.66 0.00 0.00 2.73
644 890 2.035155 GGCAACCCACCACCTACC 59.965 66.667 0.00 0.00 0.00 3.18
656 902 0.675837 CACCTACCTCGTCGTCTCCA 60.676 60.000 0.00 0.00 0.00 3.86
657 903 0.037303 ACCTACCTCGTCGTCTCCAA 59.963 55.000 0.00 0.00 0.00 3.53
658 904 0.733729 CCTACCTCGTCGTCTCCAAG 59.266 60.000 0.00 0.00 0.00 3.61
1045 1291 3.706373 GCCAGGCGTCCCTTCTCA 61.706 66.667 0.00 0.00 40.33 3.27
1072 1318 1.078426 CTCCCAAGGCCTTACCACG 60.078 63.158 20.00 5.09 43.14 4.94
1073 1319 2.045340 CCCAAGGCCTTACCACGG 60.045 66.667 20.00 14.83 43.14 4.94
1109 1363 0.103937 CCTCTCGCCTCAGTTCCATC 59.896 60.000 0.00 0.00 0.00 3.51
1121 1384 5.241403 TCAGTTCCATCTTTGCCTTTCTA 57.759 39.130 0.00 0.00 0.00 2.10
1122 1385 5.819991 TCAGTTCCATCTTTGCCTTTCTAT 58.180 37.500 0.00 0.00 0.00 1.98
1123 1386 5.649395 TCAGTTCCATCTTTGCCTTTCTATG 59.351 40.000 0.00 0.00 0.00 2.23
1124 1387 5.649395 CAGTTCCATCTTTGCCTTTCTATGA 59.351 40.000 0.00 0.00 0.00 2.15
1125 1388 5.884792 AGTTCCATCTTTGCCTTTCTATGAG 59.115 40.000 0.00 0.00 0.00 2.90
1128 1391 5.130975 TCCATCTTTGCCTTTCTATGAGCTA 59.869 40.000 0.00 0.00 0.00 3.32
1129 1392 5.824624 CCATCTTTGCCTTTCTATGAGCTAA 59.175 40.000 0.00 0.00 0.00 3.09
1130 1393 6.489361 CCATCTTTGCCTTTCTATGAGCTAAT 59.511 38.462 0.00 0.00 0.00 1.73
1131 1394 7.663081 CCATCTTTGCCTTTCTATGAGCTAATA 59.337 37.037 0.00 0.00 0.00 0.98
1132 1395 9.060347 CATCTTTGCCTTTCTATGAGCTAATAA 57.940 33.333 0.00 0.00 0.00 1.40
1133 1396 8.438676 TCTTTGCCTTTCTATGAGCTAATAAC 57.561 34.615 0.00 0.00 0.00 1.89
1134 1397 8.267894 TCTTTGCCTTTCTATGAGCTAATAACT 58.732 33.333 0.00 0.00 0.00 2.24
1135 1398 7.792374 TTGCCTTTCTATGAGCTAATAACTG 57.208 36.000 0.00 0.00 0.00 3.16
1136 1399 6.291377 TGCCTTTCTATGAGCTAATAACTGG 58.709 40.000 0.00 0.00 0.00 4.00
1137 1400 6.099701 TGCCTTTCTATGAGCTAATAACTGGA 59.900 38.462 0.00 0.00 0.00 3.86
1138 1401 6.425417 GCCTTTCTATGAGCTAATAACTGGAC 59.575 42.308 0.00 0.00 0.00 4.02
1142 1405 6.997655 TCTATGAGCTAATAACTGGACCATG 58.002 40.000 0.00 0.00 0.00 3.66
1145 1408 4.130118 GAGCTAATAACTGGACCATGTGG 58.870 47.826 0.00 0.00 42.17 4.17
1155 1418 3.362040 ACCATGTGGATGTGGTTGG 57.638 52.632 5.96 0.00 46.22 3.77
1156 1419 0.482446 ACCATGTGGATGTGGTTGGT 59.518 50.000 5.96 0.00 46.22 3.67
1157 1420 0.889994 CCATGTGGATGTGGTTGGTG 59.110 55.000 0.00 0.00 37.39 4.17
1158 1421 1.619654 CATGTGGATGTGGTTGGTGT 58.380 50.000 0.00 0.00 0.00 4.16
1159 1422 1.270274 CATGTGGATGTGGTTGGTGTG 59.730 52.381 0.00 0.00 0.00 3.82
1160 1423 0.467106 TGTGGATGTGGTTGGTGTGG 60.467 55.000 0.00 0.00 0.00 4.17
1161 1424 1.152599 TGGATGTGGTTGGTGTGGG 59.847 57.895 0.00 0.00 0.00 4.61
1162 1425 1.152830 GGATGTGGTTGGTGTGGGT 59.847 57.895 0.00 0.00 0.00 4.51
1291 1572 2.641559 CTATCCGTCGGTACCGGC 59.358 66.667 32.80 30.89 45.09 6.13
1416 1813 0.035630 AGGTTTGGCAGCTGCTAGAG 60.036 55.000 35.82 0.00 41.70 2.43
1690 2101 4.705023 TGACATAGTCGAGGAATCAGTTCA 59.295 41.667 0.00 0.00 34.08 3.18
1812 2232 6.183360 ACCTTGCAATTTTGTGAAATGGAAAC 60.183 34.615 0.00 0.00 35.69 2.78
1883 2303 0.376852 TGTGACTGCGTGCAAGTTTC 59.623 50.000 0.59 0.00 0.00 2.78
2550 3072 4.828925 GCTCCTGGCTGGTCTCGC 62.829 72.222 10.44 5.80 38.06 5.03
2796 3497 0.244721 GTCCTGGCATTTTCACTGGC 59.755 55.000 0.00 0.00 39.47 4.85
3041 4332 9.738832 GTTTTGTGTTGTATTGTAAGGTATTGT 57.261 29.630 0.00 0.00 0.00 2.71
3053 4344 6.567050 TGTAAGGTATTGTCGTACCATCTTC 58.433 40.000 5.94 0.00 45.35 2.87
3080 4371 9.236006 AGCAATTATATTTCTATTTGAGCCGAT 57.764 29.630 0.00 0.00 0.00 4.18
3300 4591 3.546670 GCTACTCACACCGTAAGAAATCG 59.453 47.826 0.00 0.00 43.02 3.34
3318 4609 6.642540 AGAAATCGAAAATCAACCTGAAAAGC 59.357 34.615 0.00 0.00 0.00 3.51
3345 4636 8.414629 AATTAAAGAAGCAAGTGGAAGAATCT 57.585 30.769 0.00 0.00 0.00 2.40
3411 4702 3.424829 CGATGGATGTCGTGTCAAAAAGG 60.425 47.826 0.00 0.00 36.88 3.11
3513 4819 3.935828 GCTTCTCCCAACTGATTCAGTAC 59.064 47.826 19.27 0.00 44.62 2.73
3515 4821 5.799213 CTTCTCCCAACTGATTCAGTACTT 58.201 41.667 19.27 1.69 44.62 2.24
3516 4822 5.152623 TCTCCCAACTGATTCAGTACTTG 57.847 43.478 19.27 13.62 44.62 3.16
3548 4854 6.481644 CCTAAGCATTGAACCTGTTAGAGATC 59.518 42.308 0.00 0.00 0.00 2.75
3661 5219 4.949856 ACCAATTATAGGTCTTGCTGGTTG 59.050 41.667 0.00 0.00 32.90 3.77
3731 5289 4.384247 GCACTCGTCTCATGCATATACTTC 59.616 45.833 0.00 0.00 39.23 3.01
3832 5735 1.850441 CCTTGGTCGTTATTAGTCGCG 59.150 52.381 0.00 0.00 0.00 5.87
3852 5755 3.302870 GCGCACGTATAGGGTGTTTAATG 60.303 47.826 0.30 0.00 37.70 1.90
3858 5761 4.750098 CGTATAGGGTGTTTAATGCTCCTG 59.250 45.833 0.00 0.00 0.00 3.86
3944 7000 0.457851 CCGGCATTTATTTTCCCGCA 59.542 50.000 0.00 0.00 37.73 5.69
4026 7316 3.857093 GCTCTCTCGTCAAGTGAAATCTC 59.143 47.826 0.00 0.00 0.00 2.75
4030 7320 5.241728 TCTCTCGTCAAGTGAAATCTCTGAA 59.758 40.000 0.00 0.00 0.00 3.02
4031 7321 5.465051 TCTCGTCAAGTGAAATCTCTGAAG 58.535 41.667 0.00 0.00 0.00 3.02
4055 7345 2.869897 GAAACCGTTGTTGTTTCTGCA 58.130 42.857 8.25 0.00 45.10 4.41
4065 7355 6.291269 CGTTGTTGTTTCTGCAAGATTTTCTC 60.291 38.462 0.00 0.00 46.36 2.87
4068 7358 7.995289 TGTTGTTTCTGCAAGATTTTCTCTTA 58.005 30.769 0.00 0.00 46.36 2.10
4081 7371 7.087639 AGATTTTCTCTTACTGACGTCTCAAG 58.912 38.462 17.92 15.75 0.00 3.02
4085 7375 1.979469 CTTACTGACGTCTCAAGTGCG 59.021 52.381 17.92 4.18 0.00 5.34
4109 7399 1.398692 TTCACCCTTTTGACCTGTGC 58.601 50.000 0.00 0.00 0.00 4.57
4110 7400 0.550914 TCACCCTTTTGACCTGTGCT 59.449 50.000 0.00 0.00 0.00 4.40
4111 7401 0.670162 CACCCTTTTGACCTGTGCTG 59.330 55.000 0.00 0.00 0.00 4.41
4112 7402 0.258774 ACCCTTTTGACCTGTGCTGT 59.741 50.000 0.00 0.00 0.00 4.40
4113 7403 0.670162 CCCTTTTGACCTGTGCTGTG 59.330 55.000 0.00 0.00 0.00 3.66
4118 7408 3.769739 TTTGACCTGTGCTGTGAGTAT 57.230 42.857 0.00 0.00 0.00 2.12
4120 7410 4.456280 TTGACCTGTGCTGTGAGTATAG 57.544 45.455 0.00 0.00 0.00 1.31
4121 7411 3.697166 TGACCTGTGCTGTGAGTATAGA 58.303 45.455 0.00 0.00 0.00 1.98
4122 7412 4.281657 TGACCTGTGCTGTGAGTATAGAT 58.718 43.478 0.00 0.00 0.00 1.98
4128 7418 6.018589 TGTGCTGTGAGTATAGATAGATGC 57.981 41.667 0.00 0.00 0.00 3.91
4134 7424 6.997655 TGTGAGTATAGATAGATGCCCTTTG 58.002 40.000 0.00 0.00 0.00 2.77
4149 7439 3.611766 GCCCTTTGGACAAATCGAAACTC 60.612 47.826 0.00 0.00 30.35 3.01
4155 7445 0.036306 ACAAATCGAAACTCGGCCCT 59.964 50.000 0.00 0.00 40.88 5.19
4297 7608 1.371932 TGCTTGGGCATGCTTTTGG 59.628 52.632 18.92 5.81 44.28 3.28
4308 7619 6.012069 TGGGCATGCTTTTGGACCTATATATA 60.012 38.462 18.92 0.00 0.00 0.86
4396 7709 5.276161 GCTTGTGATTTAACGGTTTGTTGTG 60.276 40.000 0.00 0.00 42.01 3.33
4425 7738 2.025589 TTTCCACGTGTGTTGCAGTA 57.974 45.000 15.65 0.00 0.00 2.74
4458 7771 1.741706 CGGATCAGCAGCAATTTGAGT 59.258 47.619 0.00 0.00 0.00 3.41
4463 7776 5.586243 GGATCAGCAGCAATTTGAGTAGTTA 59.414 40.000 0.00 0.00 0.00 2.24
4481 7794 2.036958 TACCCATTCATTCACAGCCG 57.963 50.000 0.00 0.00 0.00 5.52
4485 7798 0.374758 CATTCATTCACAGCCGTCGG 59.625 55.000 6.99 6.99 0.00 4.79
4488 7801 2.100631 CATTCACAGCCGTCGGTCC 61.101 63.158 13.94 0.00 0.00 4.46
4544 7857 0.395586 TTCCATTCCTTCCCATGCGG 60.396 55.000 0.00 0.00 0.00 5.69
4591 7904 2.726821 CTGCTTATTCTTTGCTCCCCA 58.273 47.619 0.00 0.00 0.00 4.96
4592 7905 2.686915 CTGCTTATTCTTTGCTCCCCAG 59.313 50.000 0.00 0.00 0.00 4.45
4679 7993 0.591170 ACCGTGTGAATTTCTTGCCG 59.409 50.000 0.00 0.00 0.00 5.69
4696 8010 1.882352 GCCGGGATTCAGTTCAGTTGT 60.882 52.381 2.18 0.00 0.00 3.32
4769 8083 3.386078 ACCAGCTGTATGTATGAGTCCAG 59.614 47.826 13.81 0.00 0.00 3.86
4781 8095 0.598562 GAGTCCAGTTCAGTGCTCGA 59.401 55.000 0.00 0.00 0.00 4.04
4841 8155 9.918630 ATTTATTCTTCCACATTCAAAGACAAG 57.081 29.630 0.00 0.00 0.00 3.16
4842 8156 8.690203 TTATTCTTCCACATTCAAAGACAAGA 57.310 30.769 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.465512 GTGCAACGCAGCCATCCG 62.466 66.667 0.00 0.00 40.08 4.18
30 31 1.139163 CAAAATCCCTTGCGTGCAAC 58.861 50.000 2.58 0.00 0.00 4.17
31 32 1.000385 CTCAAAATCCCTTGCGTGCAA 60.000 47.619 7.12 7.12 0.00 4.08
32 33 0.597568 CTCAAAATCCCTTGCGTGCA 59.402 50.000 0.00 0.00 0.00 4.57
33 34 0.109132 CCTCAAAATCCCTTGCGTGC 60.109 55.000 0.00 0.00 0.00 5.34
34 35 1.068333 CACCTCAAAATCCCTTGCGTG 60.068 52.381 0.00 0.00 0.00 5.34
35 36 1.247567 CACCTCAAAATCCCTTGCGT 58.752 50.000 0.00 0.00 0.00 5.24
36 37 0.527565 CCACCTCAAAATCCCTTGCG 59.472 55.000 0.00 0.00 0.00 4.85
37 38 0.897621 CCCACCTCAAAATCCCTTGC 59.102 55.000 0.00 0.00 0.00 4.01
38 39 1.077005 TCCCCACCTCAAAATCCCTTG 59.923 52.381 0.00 0.00 0.00 3.61
39 40 1.466858 TCCCCACCTCAAAATCCCTT 58.533 50.000 0.00 0.00 0.00 3.95
40 41 1.698874 ATCCCCACCTCAAAATCCCT 58.301 50.000 0.00 0.00 0.00 4.20
41 42 3.204382 TCTTATCCCCACCTCAAAATCCC 59.796 47.826 0.00 0.00 0.00 3.85
42 43 4.519906 TCTTATCCCCACCTCAAAATCC 57.480 45.455 0.00 0.00 0.00 3.01
43 44 7.423844 AATTTCTTATCCCCACCTCAAAATC 57.576 36.000 0.00 0.00 0.00 2.17
44 45 7.311234 CCAAATTTCTTATCCCCACCTCAAAAT 60.311 37.037 0.00 0.00 0.00 1.82
45 46 6.013812 CCAAATTTCTTATCCCCACCTCAAAA 60.014 38.462 0.00 0.00 0.00 2.44
46 47 5.483583 CCAAATTTCTTATCCCCACCTCAAA 59.516 40.000 0.00 0.00 0.00 2.69
47 48 5.022787 CCAAATTTCTTATCCCCACCTCAA 58.977 41.667 0.00 0.00 0.00 3.02
48 49 4.571792 CCCAAATTTCTTATCCCCACCTCA 60.572 45.833 0.00 0.00 0.00 3.86
49 50 3.960755 CCCAAATTTCTTATCCCCACCTC 59.039 47.826 0.00 0.00 0.00 3.85
50 51 3.310583 CCCCAAATTTCTTATCCCCACCT 60.311 47.826 0.00 0.00 0.00 4.00
51 52 3.038280 CCCCAAATTTCTTATCCCCACC 58.962 50.000 0.00 0.00 0.00 4.61
52 53 2.434336 GCCCCAAATTTCTTATCCCCAC 59.566 50.000 0.00 0.00 0.00 4.61
53 54 2.758130 GCCCCAAATTTCTTATCCCCA 58.242 47.619 0.00 0.00 0.00 4.96
54 55 1.686587 CGCCCCAAATTTCTTATCCCC 59.313 52.381 0.00 0.00 0.00 4.81
55 56 1.686587 CCGCCCCAAATTTCTTATCCC 59.313 52.381 0.00 0.00 0.00 3.85
56 57 1.686587 CCCGCCCCAAATTTCTTATCC 59.313 52.381 0.00 0.00 0.00 2.59
57 58 1.686587 CCCCGCCCCAAATTTCTTATC 59.313 52.381 0.00 0.00 0.00 1.75
58 59 1.289530 TCCCCGCCCCAAATTTCTTAT 59.710 47.619 0.00 0.00 0.00 1.73
59 60 0.705253 TCCCCGCCCCAAATTTCTTA 59.295 50.000 0.00 0.00 0.00 2.10
60 61 0.178918 TTCCCCGCCCCAAATTTCTT 60.179 50.000 0.00 0.00 0.00 2.52
61 62 0.614697 CTTCCCCGCCCCAAATTTCT 60.615 55.000 0.00 0.00 0.00 2.52
62 63 1.613317 CCTTCCCCGCCCCAAATTTC 61.613 60.000 0.00 0.00 0.00 2.17
63 64 1.612146 CCTTCCCCGCCCCAAATTT 60.612 57.895 0.00 0.00 0.00 1.82
64 65 2.038813 CCTTCCCCGCCCCAAATT 59.961 61.111 0.00 0.00 0.00 1.82
65 66 4.074408 CCCTTCCCCGCCCCAAAT 62.074 66.667 0.00 0.00 0.00 2.32
69 70 3.751018 AAATCCCTTCCCCGCCCC 61.751 66.667 0.00 0.00 0.00 5.80
70 71 2.442087 CAAATCCCTTCCCCGCCC 60.442 66.667 0.00 0.00 0.00 6.13
71 72 2.442087 CCAAATCCCTTCCCCGCC 60.442 66.667 0.00 0.00 0.00 6.13
72 73 3.147595 GCCAAATCCCTTCCCCGC 61.148 66.667 0.00 0.00 0.00 6.13
73 74 0.687427 ATTGCCAAATCCCTTCCCCG 60.687 55.000 0.00 0.00 0.00 5.73
74 75 1.583556 AATTGCCAAATCCCTTCCCC 58.416 50.000 0.00 0.00 0.00 4.81
75 76 3.719268 AAAATTGCCAAATCCCTTCCC 57.281 42.857 0.00 0.00 0.00 3.97
76 77 4.935205 GTGTAAAATTGCCAAATCCCTTCC 59.065 41.667 0.00 0.00 0.00 3.46
77 78 5.793817 AGTGTAAAATTGCCAAATCCCTTC 58.206 37.500 0.00 0.00 0.00 3.46
78 79 5.823861 AGTGTAAAATTGCCAAATCCCTT 57.176 34.783 0.00 0.00 0.00 3.95
79 80 6.926630 TTAGTGTAAAATTGCCAAATCCCT 57.073 33.333 0.00 0.00 0.00 4.20
80 81 7.277760 GTGATTAGTGTAAAATTGCCAAATCCC 59.722 37.037 0.00 0.00 0.00 3.85
81 82 7.277760 GGTGATTAGTGTAAAATTGCCAAATCC 59.722 37.037 0.00 0.00 0.00 3.01
82 83 7.277760 GGGTGATTAGTGTAAAATTGCCAAATC 59.722 37.037 0.00 0.00 0.00 2.17
83 84 7.102993 GGGTGATTAGTGTAAAATTGCCAAAT 58.897 34.615 0.00 0.00 0.00 2.32
84 85 6.459923 GGGTGATTAGTGTAAAATTGCCAAA 58.540 36.000 0.00 0.00 0.00 3.28
85 86 5.046950 GGGGTGATTAGTGTAAAATTGCCAA 60.047 40.000 0.00 0.00 0.00 4.52
86 87 4.464597 GGGGTGATTAGTGTAAAATTGCCA 59.535 41.667 0.00 0.00 0.00 4.92
87 88 4.709886 AGGGGTGATTAGTGTAAAATTGCC 59.290 41.667 0.00 0.00 0.00 4.52
88 89 5.914898 AGGGGTGATTAGTGTAAAATTGC 57.085 39.130 0.00 0.00 0.00 3.56
89 90 6.099341 GCAAGGGGTGATTAGTGTAAAATTG 58.901 40.000 0.00 0.00 0.00 2.32
90 91 5.777732 TGCAAGGGGTGATTAGTGTAAAATT 59.222 36.000 0.00 0.00 0.00 1.82
91 92 5.329399 TGCAAGGGGTGATTAGTGTAAAAT 58.671 37.500 0.00 0.00 0.00 1.82
92 93 4.730966 TGCAAGGGGTGATTAGTGTAAAA 58.269 39.130 0.00 0.00 0.00 1.52
93 94 4.374689 TGCAAGGGGTGATTAGTGTAAA 57.625 40.909 0.00 0.00 0.00 2.01
94 95 4.202524 ACTTGCAAGGGGTGATTAGTGTAA 60.203 41.667 29.18 0.00 0.00 2.41
95 96 3.329520 ACTTGCAAGGGGTGATTAGTGTA 59.670 43.478 29.18 0.00 0.00 2.90
96 97 2.108250 ACTTGCAAGGGGTGATTAGTGT 59.892 45.455 29.18 2.31 0.00 3.55
97 98 2.795329 ACTTGCAAGGGGTGATTAGTG 58.205 47.619 29.18 1.64 0.00 2.74
98 99 4.227300 TGATACTTGCAAGGGGTGATTAGT 59.773 41.667 29.18 8.43 0.00 2.24
99 100 4.576463 GTGATACTTGCAAGGGGTGATTAG 59.424 45.833 29.18 2.09 0.00 1.73
100 101 4.227300 AGTGATACTTGCAAGGGGTGATTA 59.773 41.667 29.18 11.77 0.00 1.75
101 102 3.010584 AGTGATACTTGCAAGGGGTGATT 59.989 43.478 29.18 9.87 0.00 2.57
102 103 2.578021 AGTGATACTTGCAAGGGGTGAT 59.422 45.455 29.18 14.13 0.00 3.06
103 104 1.985159 AGTGATACTTGCAAGGGGTGA 59.015 47.619 29.18 10.11 0.00 4.02
104 105 2.086869 CAGTGATACTTGCAAGGGGTG 58.913 52.381 29.18 13.71 0.00 4.61
105 106 1.985159 TCAGTGATACTTGCAAGGGGT 59.015 47.619 29.18 14.92 0.00 4.95
106 107 2.787473 TCAGTGATACTTGCAAGGGG 57.213 50.000 29.18 7.03 0.00 4.79
107 108 4.095483 GTGATTCAGTGATACTTGCAAGGG 59.905 45.833 29.18 7.81 0.00 3.95
108 109 4.696877 TGTGATTCAGTGATACTTGCAAGG 59.303 41.667 29.18 12.28 0.00 3.61
109 110 5.868043 TGTGATTCAGTGATACTTGCAAG 57.132 39.130 24.84 24.84 0.00 4.01
110 111 5.764686 AGTTGTGATTCAGTGATACTTGCAA 59.235 36.000 0.00 0.00 0.00 4.08
111 112 5.308014 AGTTGTGATTCAGTGATACTTGCA 58.692 37.500 0.00 0.00 0.00 4.08
112 113 5.869753 AGTTGTGATTCAGTGATACTTGC 57.130 39.130 0.00 0.00 0.00 4.01
113 114 7.099764 AGGTAGTTGTGATTCAGTGATACTTG 58.900 38.462 0.00 0.00 0.00 3.16
114 115 7.246171 AGGTAGTTGTGATTCAGTGATACTT 57.754 36.000 0.00 0.00 0.00 2.24
115 116 6.859112 AGGTAGTTGTGATTCAGTGATACT 57.141 37.500 0.00 0.00 0.00 2.12
116 117 6.979238 GGTAGGTAGTTGTGATTCAGTGATAC 59.021 42.308 0.00 0.00 0.00 2.24
117 118 6.895756 AGGTAGGTAGTTGTGATTCAGTGATA 59.104 38.462 0.00 0.00 0.00 2.15
118 119 5.721960 AGGTAGGTAGTTGTGATTCAGTGAT 59.278 40.000 0.00 0.00 0.00 3.06
119 120 5.084519 AGGTAGGTAGTTGTGATTCAGTGA 58.915 41.667 0.00 0.00 0.00 3.41
120 121 5.407407 AGGTAGGTAGTTGTGATTCAGTG 57.593 43.478 0.00 0.00 0.00 3.66
121 122 6.014647 TGTAGGTAGGTAGTTGTGATTCAGT 58.985 40.000 0.00 0.00 0.00 3.41
122 123 6.525578 TGTAGGTAGGTAGTTGTGATTCAG 57.474 41.667 0.00 0.00 0.00 3.02
123 124 6.127168 CCATGTAGGTAGGTAGTTGTGATTCA 60.127 42.308 0.00 0.00 0.00 2.57
124 125 6.097839 TCCATGTAGGTAGGTAGTTGTGATTC 59.902 42.308 0.00 0.00 39.02 2.52
125 126 5.962031 TCCATGTAGGTAGGTAGTTGTGATT 59.038 40.000 0.00 0.00 39.02 2.57
126 127 5.525484 TCCATGTAGGTAGGTAGTTGTGAT 58.475 41.667 0.00 0.00 39.02 3.06
127 128 4.938028 TCCATGTAGGTAGGTAGTTGTGA 58.062 43.478 0.00 0.00 39.02 3.58
128 129 5.670792 TTCCATGTAGGTAGGTAGTTGTG 57.329 43.478 0.00 0.00 39.02 3.33
129 130 5.130477 CCATTCCATGTAGGTAGGTAGTTGT 59.870 44.000 0.00 0.00 39.02 3.32
130 131 5.130477 ACCATTCCATGTAGGTAGGTAGTTG 59.870 44.000 0.00 0.00 35.92 3.16
131 132 5.286221 ACCATTCCATGTAGGTAGGTAGTT 58.714 41.667 0.00 0.00 35.92 2.24
132 133 4.892198 ACCATTCCATGTAGGTAGGTAGT 58.108 43.478 0.00 0.00 35.92 2.73
133 134 4.899457 TGACCATTCCATGTAGGTAGGTAG 59.101 45.833 0.00 0.00 37.13 3.18
140 141 3.126858 CGTGTTTGACCATTCCATGTAGG 59.873 47.826 0.00 0.00 39.47 3.18
145 146 0.887933 GCCGTGTTTGACCATTCCAT 59.112 50.000 0.00 0.00 0.00 3.41
174 175 6.785488 ACCATCACTATTGCACATATAACG 57.215 37.500 0.00 0.00 0.00 3.18
176 177 9.791801 ATTGTACCATCACTATTGCACATATAA 57.208 29.630 0.00 0.00 0.00 0.98
195 196 0.979811 CGACGTGACGTGATTGTACC 59.020 55.000 18.09 0.00 41.37 3.34
227 228 9.077885 ACACAAAAACAGTCCTTGTATCAATAT 57.922 29.630 0.96 0.00 39.73 1.28
229 230 7.346751 ACACAAAAACAGTCCTTGTATCAAT 57.653 32.000 0.96 0.00 39.73 2.57
230 231 6.767524 ACACAAAAACAGTCCTTGTATCAA 57.232 33.333 0.96 0.00 39.73 2.57
231 232 6.767524 AACACAAAAACAGTCCTTGTATCA 57.232 33.333 0.96 0.00 39.73 2.15
232 233 7.254852 TGAAACACAAAAACAGTCCTTGTATC 58.745 34.615 0.96 2.19 39.73 2.24
233 234 7.164230 TGAAACACAAAAACAGTCCTTGTAT 57.836 32.000 0.96 0.00 39.73 2.29
249 260 2.945008 CTCAAGTTGAGCCTGAAACACA 59.055 45.455 19.55 0.00 37.72 3.72
377 399 2.666508 CGTGTGTCTAGGATTTTCGGTG 59.333 50.000 0.00 0.00 0.00 4.94
378 400 2.353406 CCGTGTGTCTAGGATTTTCGGT 60.353 50.000 0.00 0.00 0.00 4.69
379 401 2.268298 CCGTGTGTCTAGGATTTTCGG 58.732 52.381 0.00 0.00 0.00 4.30
380 402 2.268298 CCCGTGTGTCTAGGATTTTCG 58.732 52.381 0.00 0.00 0.00 3.46
381 403 2.007608 GCCCGTGTGTCTAGGATTTTC 58.992 52.381 0.00 0.00 0.00 2.29
382 404 1.349688 TGCCCGTGTGTCTAGGATTTT 59.650 47.619 0.00 0.00 0.00 1.82
383 405 0.981183 TGCCCGTGTGTCTAGGATTT 59.019 50.000 0.00 0.00 0.00 2.17
384 406 0.537188 CTGCCCGTGTGTCTAGGATT 59.463 55.000 0.00 0.00 0.00 3.01
385 407 0.614979 ACTGCCCGTGTGTCTAGGAT 60.615 55.000 0.00 0.00 0.00 3.24
386 408 0.830444 AACTGCCCGTGTGTCTAGGA 60.830 55.000 0.00 0.00 0.00 2.94
387 409 0.034896 AAACTGCCCGTGTGTCTAGG 59.965 55.000 0.00 0.00 0.00 3.02
388 410 2.029290 AGTAAACTGCCCGTGTGTCTAG 60.029 50.000 0.00 0.00 0.00 2.43
389 411 1.965643 AGTAAACTGCCCGTGTGTCTA 59.034 47.619 0.00 0.00 0.00 2.59
390 412 0.756903 AGTAAACTGCCCGTGTGTCT 59.243 50.000 0.00 0.00 0.00 3.41
391 413 1.589803 AAGTAAACTGCCCGTGTGTC 58.410 50.000 0.00 0.00 0.00 3.67
392 414 2.762745 CTAAGTAAACTGCCCGTGTGT 58.237 47.619 0.00 0.00 0.00 3.72
393 415 1.463444 GCTAAGTAAACTGCCCGTGTG 59.537 52.381 0.00 0.00 0.00 3.82
394 416 1.071071 TGCTAAGTAAACTGCCCGTGT 59.929 47.619 0.00 0.00 0.00 4.49
395 417 1.803334 TGCTAAGTAAACTGCCCGTG 58.197 50.000 0.00 0.00 0.00 4.94
396 418 2.554370 TTGCTAAGTAAACTGCCCGT 57.446 45.000 0.00 0.00 0.00 5.28
397 419 3.000925 CGTATTGCTAAGTAAACTGCCCG 59.999 47.826 0.00 0.00 0.00 6.13
398 420 3.311596 CCGTATTGCTAAGTAAACTGCCC 59.688 47.826 0.00 0.00 0.00 5.36
399 421 4.033702 GTCCGTATTGCTAAGTAAACTGCC 59.966 45.833 0.00 0.00 0.00 4.85
400 422 4.868734 AGTCCGTATTGCTAAGTAAACTGC 59.131 41.667 0.00 0.00 0.00 4.40
401 423 6.331061 AGAGTCCGTATTGCTAAGTAAACTG 58.669 40.000 0.00 0.00 0.00 3.16
402 424 6.527057 AGAGTCCGTATTGCTAAGTAAACT 57.473 37.500 0.00 0.00 0.00 2.66
403 425 7.201504 GGAAAGAGTCCGTATTGCTAAGTAAAC 60.202 40.741 0.00 0.00 36.40 2.01
404 426 6.815142 GGAAAGAGTCCGTATTGCTAAGTAAA 59.185 38.462 0.00 0.00 36.40 2.01
405 427 6.335777 GGAAAGAGTCCGTATTGCTAAGTAA 58.664 40.000 0.00 0.00 36.40 2.24
406 428 5.899299 GGAAAGAGTCCGTATTGCTAAGTA 58.101 41.667 0.00 0.00 36.40 2.24
407 429 4.756502 GGAAAGAGTCCGTATTGCTAAGT 58.243 43.478 0.00 0.00 36.40 2.24
420 442 5.239351 GGGAAGAGTAGTTTGGAAAGAGTC 58.761 45.833 0.00 0.00 0.00 3.36
421 443 4.041815 GGGGAAGAGTAGTTTGGAAAGAGT 59.958 45.833 0.00 0.00 0.00 3.24
422 444 4.565861 GGGGGAAGAGTAGTTTGGAAAGAG 60.566 50.000 0.00 0.00 0.00 2.85
423 445 3.329814 GGGGGAAGAGTAGTTTGGAAAGA 59.670 47.826 0.00 0.00 0.00 2.52
424 446 3.330998 AGGGGGAAGAGTAGTTTGGAAAG 59.669 47.826 0.00 0.00 0.00 2.62
425 447 3.329814 GAGGGGGAAGAGTAGTTTGGAAA 59.670 47.826 0.00 0.00 0.00 3.13
426 448 2.910977 GAGGGGGAAGAGTAGTTTGGAA 59.089 50.000 0.00 0.00 0.00 3.53
427 449 2.547990 GAGGGGGAAGAGTAGTTTGGA 58.452 52.381 0.00 0.00 0.00 3.53
428 450 1.560146 GGAGGGGGAAGAGTAGTTTGG 59.440 57.143 0.00 0.00 0.00 3.28
429 451 1.560146 GGGAGGGGGAAGAGTAGTTTG 59.440 57.143 0.00 0.00 0.00 2.93
430 452 1.557426 GGGGAGGGGGAAGAGTAGTTT 60.557 57.143 0.00 0.00 0.00 2.66
431 453 0.044397 GGGGAGGGGGAAGAGTAGTT 59.956 60.000 0.00 0.00 0.00 2.24
432 454 1.710972 GGGGAGGGGGAAGAGTAGT 59.289 63.158 0.00 0.00 0.00 2.73
433 455 1.074395 GGGGGAGGGGGAAGAGTAG 60.074 68.421 0.00 0.00 0.00 2.57
434 456 3.126044 GGGGGAGGGGGAAGAGTA 58.874 66.667 0.00 0.00 0.00 2.59
453 475 1.315257 CCACCCGCCCTGAAAATCAG 61.315 60.000 0.32 0.32 43.91 2.90
454 476 1.304052 CCACCCGCCCTGAAAATCA 60.304 57.895 0.00 0.00 0.00 2.57
455 477 2.052104 CCCACCCGCCCTGAAAATC 61.052 63.158 0.00 0.00 0.00 2.17
456 478 2.037208 CCCACCCGCCCTGAAAAT 59.963 61.111 0.00 0.00 0.00 1.82
457 479 4.986708 GCCCACCCGCCCTGAAAA 62.987 66.667 0.00 0.00 0.00 2.29
468 490 0.323087 AATAAACTCACGGGCCCACC 60.323 55.000 24.92 0.00 0.00 4.61
469 491 1.471287 GAAATAAACTCACGGGCCCAC 59.529 52.381 24.92 0.00 0.00 4.61
470 492 1.353022 AGAAATAAACTCACGGGCCCA 59.647 47.619 24.92 0.00 0.00 5.36
471 493 2.124277 AGAAATAAACTCACGGGCCC 57.876 50.000 13.57 13.57 0.00 5.80
472 494 3.813724 GGATAGAAATAAACTCACGGGCC 59.186 47.826 0.00 0.00 0.00 5.80
473 495 4.448210 TGGATAGAAATAAACTCACGGGC 58.552 43.478 0.00 0.00 0.00 6.13
474 496 5.671493 ACTGGATAGAAATAAACTCACGGG 58.329 41.667 0.00 0.00 0.00 5.28
475 497 6.338146 TGACTGGATAGAAATAAACTCACGG 58.662 40.000 0.00 0.00 0.00 4.94
476 498 7.827819 TTGACTGGATAGAAATAAACTCACG 57.172 36.000 0.00 0.00 0.00 4.35
481 503 9.508567 GCTGATTTTGACTGGATAGAAATAAAC 57.491 33.333 0.00 0.00 0.00 2.01
482 504 8.686334 GGCTGATTTTGACTGGATAGAAATAAA 58.314 33.333 0.00 0.00 0.00 1.40
483 505 7.833682 TGGCTGATTTTGACTGGATAGAAATAA 59.166 33.333 0.00 0.00 0.00 1.40
484 506 7.345691 TGGCTGATTTTGACTGGATAGAAATA 58.654 34.615 0.00 0.00 0.00 1.40
485 507 6.189859 TGGCTGATTTTGACTGGATAGAAAT 58.810 36.000 0.00 0.00 0.00 2.17
486 508 5.569355 TGGCTGATTTTGACTGGATAGAAA 58.431 37.500 0.00 0.00 0.00 2.52
487 509 5.178096 TGGCTGATTTTGACTGGATAGAA 57.822 39.130 0.00 0.00 0.00 2.10
488 510 4.774124 CTGGCTGATTTTGACTGGATAGA 58.226 43.478 0.00 0.00 0.00 1.98
489 511 3.314635 GCTGGCTGATTTTGACTGGATAG 59.685 47.826 0.00 0.00 0.00 2.08
490 512 3.054139 AGCTGGCTGATTTTGACTGGATA 60.054 43.478 0.00 0.00 0.00 2.59
491 513 2.097825 GCTGGCTGATTTTGACTGGAT 58.902 47.619 0.00 0.00 0.00 3.41
492 514 1.074405 AGCTGGCTGATTTTGACTGGA 59.926 47.619 0.00 0.00 0.00 3.86
493 515 1.542492 AGCTGGCTGATTTTGACTGG 58.458 50.000 0.00 0.00 0.00 4.00
494 516 3.427233 GCTTAGCTGGCTGATTTTGACTG 60.427 47.826 5.25 0.00 0.00 3.51
495 517 2.751806 GCTTAGCTGGCTGATTTTGACT 59.248 45.455 5.25 0.00 0.00 3.41
496 518 2.159324 GGCTTAGCTGGCTGATTTTGAC 60.159 50.000 3.59 0.00 0.00 3.18
497 519 2.094675 GGCTTAGCTGGCTGATTTTGA 58.905 47.619 3.59 0.00 0.00 2.69
498 520 1.820519 TGGCTTAGCTGGCTGATTTTG 59.179 47.619 3.59 0.00 0.00 2.44
499 521 1.821136 GTGGCTTAGCTGGCTGATTTT 59.179 47.619 3.59 0.00 0.00 1.82
500 522 1.005215 AGTGGCTTAGCTGGCTGATTT 59.995 47.619 3.59 0.00 0.00 2.17
501 523 0.622665 AGTGGCTTAGCTGGCTGATT 59.377 50.000 3.59 0.00 0.00 2.57
502 524 0.179936 GAGTGGCTTAGCTGGCTGAT 59.820 55.000 3.59 0.00 0.00 2.90
503 525 1.599047 GAGTGGCTTAGCTGGCTGA 59.401 57.895 3.59 0.00 0.00 4.26
504 526 1.451028 GGAGTGGCTTAGCTGGCTG 60.451 63.158 3.59 0.00 0.00 4.85
505 527 2.993853 GGAGTGGCTTAGCTGGCT 59.006 61.111 3.59 0.00 0.00 4.75
506 528 1.956629 TACGGAGTGGCTTAGCTGGC 61.957 60.000 3.59 0.00 45.73 4.85
507 529 0.535335 TTACGGAGTGGCTTAGCTGG 59.465 55.000 3.59 0.00 45.73 4.85
508 530 2.604046 ATTACGGAGTGGCTTAGCTG 57.396 50.000 3.59 0.00 45.73 4.24
509 531 2.364647 GGTATTACGGAGTGGCTTAGCT 59.635 50.000 3.59 0.00 45.73 3.32
510 532 2.547430 GGGTATTACGGAGTGGCTTAGC 60.547 54.545 0.00 0.00 45.73 3.09
511 533 2.696707 TGGGTATTACGGAGTGGCTTAG 59.303 50.000 0.00 0.00 45.73 2.18
512 534 2.696707 CTGGGTATTACGGAGTGGCTTA 59.303 50.000 0.00 0.00 45.73 3.09
513 535 1.485066 CTGGGTATTACGGAGTGGCTT 59.515 52.381 0.00 0.00 45.73 4.35
514 536 1.120530 CTGGGTATTACGGAGTGGCT 58.879 55.000 0.00 0.00 45.73 4.75
515 537 0.828677 ACTGGGTATTACGGAGTGGC 59.171 55.000 0.00 0.00 45.73 5.01
516 538 4.741321 TTTACTGGGTATTACGGAGTGG 57.259 45.455 6.62 0.00 45.73 4.00
517 539 8.897872 ATATTTTTACTGGGTATTACGGAGTG 57.102 34.615 6.62 0.00 45.73 3.51
519 541 8.996271 GGAATATTTTTACTGGGTATTACGGAG 58.004 37.037 0.00 0.00 0.00 4.63
520 542 7.656948 CGGAATATTTTTACTGGGTATTACGGA 59.343 37.037 0.00 0.00 36.14 4.69
521 543 7.442062 ACGGAATATTTTTACTGGGTATTACGG 59.558 37.037 11.34 0.00 41.18 4.02
522 544 8.277713 CACGGAATATTTTTACTGGGTATTACG 58.722 37.037 6.52 6.52 42.07 3.18
523 545 8.071967 GCACGGAATATTTTTACTGGGTATTAC 58.928 37.037 0.00 0.00 0.00 1.89
524 546 7.041916 CGCACGGAATATTTTTACTGGGTATTA 60.042 37.037 0.00 0.00 0.00 0.98
525 547 6.238538 CGCACGGAATATTTTTACTGGGTATT 60.239 38.462 0.00 0.00 0.00 1.89
526 548 5.237779 CGCACGGAATATTTTTACTGGGTAT 59.762 40.000 0.00 0.00 0.00 2.73
527 549 4.571580 CGCACGGAATATTTTTACTGGGTA 59.428 41.667 0.00 0.00 0.00 3.69
528 550 3.375922 CGCACGGAATATTTTTACTGGGT 59.624 43.478 0.00 0.00 0.00 4.51
529 551 3.375922 ACGCACGGAATATTTTTACTGGG 59.624 43.478 0.00 0.00 0.00 4.45
530 552 4.142773 ACACGCACGGAATATTTTTACTGG 60.143 41.667 0.00 0.00 0.00 4.00
531 553 4.965062 ACACGCACGGAATATTTTTACTG 58.035 39.130 0.00 0.00 0.00 2.74
532 554 5.220529 GCTACACGCACGGAATATTTTTACT 60.221 40.000 0.00 0.00 38.92 2.24
533 555 4.959757 GCTACACGCACGGAATATTTTTAC 59.040 41.667 0.00 0.00 38.92 2.01
534 556 4.630505 TGCTACACGCACGGAATATTTTTA 59.369 37.500 0.00 0.00 45.47 1.52
535 557 3.437395 TGCTACACGCACGGAATATTTTT 59.563 39.130 0.00 0.00 45.47 1.94
536 558 3.004171 TGCTACACGCACGGAATATTTT 58.996 40.909 0.00 0.00 45.47 1.82
537 559 2.623535 TGCTACACGCACGGAATATTT 58.376 42.857 0.00 0.00 45.47 1.40
538 560 2.303163 TGCTACACGCACGGAATATT 57.697 45.000 0.00 0.00 45.47 1.28
549 571 2.279580 CGACGAGCGATGCTACACG 61.280 63.158 0.00 0.00 44.57 4.49
550 572 1.939785 CCGACGAGCGATGCTACAC 60.940 63.158 0.00 0.00 44.57 2.90
551 573 2.407616 CCGACGAGCGATGCTACA 59.592 61.111 0.00 0.00 44.57 2.74
552 574 3.025176 GCCGACGAGCGATGCTAC 61.025 66.667 0.00 0.00 44.57 3.58
553 575 4.266070 GGCCGACGAGCGATGCTA 62.266 66.667 0.00 0.00 44.57 3.49
556 578 4.794439 TGTGGCCGACGAGCGATG 62.794 66.667 0.00 0.00 44.57 3.84
557 579 4.498520 CTGTGGCCGACGAGCGAT 62.499 66.667 0.00 0.00 44.57 4.58
568 590 3.297620 CACCTTGTGGGCTGTGGC 61.298 66.667 0.00 0.00 39.10 5.01
569 591 1.601759 CTCACCTTGTGGGCTGTGG 60.602 63.158 0.00 0.00 39.10 4.17
570 592 0.604780 CTCTCACCTTGTGGGCTGTG 60.605 60.000 0.00 0.00 39.10 3.66
571 593 1.056700 ACTCTCACCTTGTGGGCTGT 61.057 55.000 0.00 0.00 39.10 4.40
583 823 1.979693 AGGCCGGTCTCACTCTCAC 60.980 63.158 0.35 0.00 0.00 3.51
584 824 1.979155 CAGGCCGGTCTCACTCTCA 60.979 63.158 5.00 0.00 0.00 3.27
585 825 2.716017 CCAGGCCGGTCTCACTCTC 61.716 68.421 5.00 0.00 0.00 3.20
586 826 2.681778 CCAGGCCGGTCTCACTCT 60.682 66.667 5.00 0.00 0.00 3.24
587 827 4.459089 GCCAGGCCGGTCTCACTC 62.459 72.222 5.00 0.00 36.97 3.51
610 850 5.469479 GGTTGCCGTGTTACTACTACTTTA 58.531 41.667 0.00 0.00 0.00 1.85
611 851 4.309933 GGTTGCCGTGTTACTACTACTTT 58.690 43.478 0.00 0.00 0.00 2.66
612 852 3.306294 GGGTTGCCGTGTTACTACTACTT 60.306 47.826 0.00 0.00 0.00 2.24
613 853 2.232208 GGGTTGCCGTGTTACTACTACT 59.768 50.000 0.00 0.00 0.00 2.57
614 854 2.029110 TGGGTTGCCGTGTTACTACTAC 60.029 50.000 0.00 0.00 0.00 2.73
615 855 2.029110 GTGGGTTGCCGTGTTACTACTA 60.029 50.000 0.00 0.00 0.00 1.82
616 856 1.050204 TGGGTTGCCGTGTTACTACT 58.950 50.000 0.00 0.00 0.00 2.57
617 857 1.150827 GTGGGTTGCCGTGTTACTAC 58.849 55.000 0.00 0.00 0.00 2.73
618 858 0.035176 GGTGGGTTGCCGTGTTACTA 59.965 55.000 0.00 0.00 0.00 1.82
1072 1318 1.612463 AGGAATCGCAGATACGTACCC 59.388 52.381 0.00 0.00 45.12 3.69
1073 1319 2.553172 AGAGGAATCGCAGATACGTACC 59.447 50.000 0.00 0.00 45.12 3.34
1102 1356 5.449725 GCTCATAGAAAGGCAAAGATGGAAC 60.450 44.000 0.00 0.00 0.00 3.62
1109 1363 8.341173 CAGTTATTAGCTCATAGAAAGGCAAAG 58.659 37.037 0.00 0.00 0.00 2.77
1121 1384 5.371526 CACATGGTCCAGTTATTAGCTCAT 58.628 41.667 0.00 0.00 0.00 2.90
1122 1385 4.384098 CCACATGGTCCAGTTATTAGCTCA 60.384 45.833 0.00 0.00 0.00 4.26
1123 1386 4.130118 CCACATGGTCCAGTTATTAGCTC 58.870 47.826 0.00 0.00 0.00 4.09
1124 1387 3.780294 TCCACATGGTCCAGTTATTAGCT 59.220 43.478 0.00 0.00 36.34 3.32
1125 1388 4.150897 TCCACATGGTCCAGTTATTAGC 57.849 45.455 0.00 0.00 36.34 3.09
1128 1391 4.272489 CACATCCACATGGTCCAGTTATT 58.728 43.478 0.00 0.00 33.82 1.40
1129 1392 3.371917 CCACATCCACATGGTCCAGTTAT 60.372 47.826 0.00 0.00 33.82 1.89
1130 1393 2.026356 CCACATCCACATGGTCCAGTTA 60.026 50.000 0.00 0.00 33.82 2.24
1131 1394 1.272092 CCACATCCACATGGTCCAGTT 60.272 52.381 0.00 0.00 33.82 3.16
1132 1395 0.329261 CCACATCCACATGGTCCAGT 59.671 55.000 0.00 0.00 33.82 4.00
1133 1396 0.329261 ACCACATCCACATGGTCCAG 59.671 55.000 0.00 0.00 46.62 3.86
1134 1397 2.473768 ACCACATCCACATGGTCCA 58.526 52.632 0.00 0.00 46.62 4.02
1138 1401 0.889994 CACCAACCACATCCACATGG 59.110 55.000 0.00 0.00 42.13 3.66
1142 1405 1.178534 CCCACACCAACCACATCCAC 61.179 60.000 0.00 0.00 0.00 4.02
1145 1408 1.068434 CAAACCCACACCAACCACATC 59.932 52.381 0.00 0.00 0.00 3.06
1152 1415 0.396417 CTCCACCAAACCCACACCAA 60.396 55.000 0.00 0.00 0.00 3.67
1153 1416 1.228793 CTCCACCAAACCCACACCA 59.771 57.895 0.00 0.00 0.00 4.17
1154 1417 1.530655 CCTCCACCAAACCCACACC 60.531 63.158 0.00 0.00 0.00 4.16
1155 1418 0.106419 TTCCTCCACCAAACCCACAC 60.106 55.000 0.00 0.00 0.00 3.82
1156 1419 0.856982 ATTCCTCCACCAAACCCACA 59.143 50.000 0.00 0.00 0.00 4.17
1157 1420 1.893137 GAATTCCTCCACCAAACCCAC 59.107 52.381 0.00 0.00 0.00 4.61
1158 1421 1.203125 GGAATTCCTCCACCAAACCCA 60.203 52.381 17.73 0.00 44.67 4.51
1159 1422 1.557099 GGAATTCCTCCACCAAACCC 58.443 55.000 17.73 0.00 44.67 4.11
1160 1423 1.173913 CGGAATTCCTCCACCAAACC 58.826 55.000 22.05 0.00 45.74 3.27
1161 1424 0.526211 GCGGAATTCCTCCACCAAAC 59.474 55.000 22.05 0.00 45.74 2.93
1162 1425 0.111446 TGCGGAATTCCTCCACCAAA 59.889 50.000 22.05 0.00 45.74 3.28
1690 2101 4.487948 CGAATGAACTGAAACAATGGCAT 58.512 39.130 0.00 0.00 0.00 4.40
2241 2695 5.738619 TCACAGGTCTGCTTGTTTCTATA 57.261 39.130 0.00 0.00 32.27 1.31
2796 3497 6.733280 GCTTCAATTGCAACATTTACAATTCG 59.267 34.615 0.00 0.00 40.94 3.34
3041 4332 8.902540 AAATATAATTGCTGAAGATGGTACGA 57.097 30.769 0.00 0.00 0.00 3.43
3053 4344 8.506437 TCGGCTCAAATAGAAATATAATTGCTG 58.494 33.333 0.00 0.00 0.00 4.41
3276 4567 4.595762 TTTCTTACGGTGTGAGTAGCTT 57.404 40.909 0.00 0.00 0.00 3.74
3318 4609 8.822652 ATTCTTCCACTTGCTTCTTTAATTTG 57.177 30.769 0.00 0.00 0.00 2.32
3326 4617 3.328931 TGGAGATTCTTCCACTTGCTTCT 59.671 43.478 1.98 0.00 42.24 2.85
3345 4636 3.622206 GCAGTGACTTAACCCATGATGGA 60.622 47.826 14.26 0.00 40.96 3.41
3411 4702 4.386954 GCAATAAAGCCAAAGAGAGCAAAC 59.613 41.667 0.00 0.00 0.00 2.93
3548 4854 4.632153 ACAACAGTCTTAGGCTGTAAGTG 58.368 43.478 20.32 16.47 45.36 3.16
3705 5263 0.036105 ATGCATGAGACGAGTGCCAA 60.036 50.000 0.00 0.00 38.06 4.52
3731 5289 4.275936 AGGTTTTTCATCTTGTCGTTGAGG 59.724 41.667 0.00 0.00 0.00 3.86
3832 5735 3.875134 AGCATTAAACACCCTATACGTGC 59.125 43.478 0.00 0.00 34.45 5.34
3858 5761 1.866853 GCCCAAGCCTGCAAGTACAC 61.867 60.000 0.00 0.00 0.00 2.90
3944 7000 1.834263 GGAGCTCCAGACACCAAGTAT 59.166 52.381 28.43 0.00 35.64 2.12
4006 7296 4.762251 TCAGAGATTTCACTTGACGAGAGA 59.238 41.667 0.00 0.00 0.00 3.10
4026 7316 3.108144 CAACAACGGTTTCAAGCTTCAG 58.892 45.455 0.00 0.00 34.21 3.02
4030 7320 3.586100 AAACAACAACGGTTTCAAGCT 57.414 38.095 0.00 0.00 33.39 3.74
4055 7345 7.434492 TTGAGACGTCAGTAAGAGAAAATCTT 58.566 34.615 19.50 0.00 41.78 2.40
4065 7355 1.979469 CGCACTTGAGACGTCAGTAAG 59.021 52.381 19.50 19.03 32.98 2.34
4068 7358 1.734137 ACGCACTTGAGACGTCAGT 59.266 52.632 19.50 9.86 34.35 3.41
4081 7371 2.034053 TCAAAAGGGTGAATTGACGCAC 59.966 45.455 14.17 0.88 0.00 5.34
4109 7399 6.849085 AAGGGCATCTATCTATACTCACAG 57.151 41.667 0.00 0.00 0.00 3.66
4110 7400 6.014242 CCAAAGGGCATCTATCTATACTCACA 60.014 42.308 0.00 0.00 0.00 3.58
4111 7401 6.211584 TCCAAAGGGCATCTATCTATACTCAC 59.788 42.308 0.00 0.00 0.00 3.51
4112 7402 6.211584 GTCCAAAGGGCATCTATCTATACTCA 59.788 42.308 0.00 0.00 0.00 3.41
4113 7403 6.211584 TGTCCAAAGGGCATCTATCTATACTC 59.788 42.308 0.00 0.00 0.00 2.59
4118 7408 5.708736 TTTGTCCAAAGGGCATCTATCTA 57.291 39.130 0.00 0.00 0.00 1.98
4120 7410 4.023707 CGATTTGTCCAAAGGGCATCTATC 60.024 45.833 0.00 0.00 33.32 2.08
4121 7411 3.885297 CGATTTGTCCAAAGGGCATCTAT 59.115 43.478 0.00 0.00 33.32 1.98
4122 7412 3.054728 TCGATTTGTCCAAAGGGCATCTA 60.055 43.478 0.00 0.00 33.32 1.98
4128 7418 3.364964 CGAGTTTCGATTTGTCCAAAGGG 60.365 47.826 0.00 0.00 43.74 3.95
4134 7424 0.446616 GGCCGAGTTTCGATTTGTCC 59.553 55.000 0.00 0.00 43.74 4.02
4149 7439 0.393077 ATCGGAACAATAGAGGGCCG 59.607 55.000 0.00 0.00 40.06 6.13
4155 7445 3.244215 GCTCATGGGATCGGAACAATAGA 60.244 47.826 0.00 0.00 0.00 1.98
4293 7604 8.645814 ACGAGTCATGTATATATAGGTCCAAA 57.354 34.615 0.00 0.00 0.00 3.28
4297 7608 9.381033 ACTGTACGAGTCATGTATATATAGGTC 57.619 37.037 0.00 0.00 0.00 3.85
4308 7619 4.848562 TCTGAAACTGTACGAGTCATGT 57.151 40.909 0.00 0.00 31.73 3.21
4458 7771 4.523083 GGCTGTGAATGAATGGGTAACTA 58.477 43.478 0.00 0.00 0.00 2.24
4463 7776 0.038166 ACGGCTGTGAATGAATGGGT 59.962 50.000 0.00 0.00 0.00 4.51
4485 7798 0.594602 GCCAAAACTACGGGTTGGAC 59.405 55.000 5.86 0.00 43.82 4.02
4544 7857 2.029838 AAGTGATCAAGATGACCGCC 57.970 50.000 0.00 0.00 0.00 6.13
4591 7904 6.488006 ACATCAGTGAAAATTTAGTGCAGACT 59.512 34.615 0.00 0.00 36.07 3.24
4592 7905 6.672147 ACATCAGTGAAAATTTAGTGCAGAC 58.328 36.000 0.00 0.00 0.00 3.51
4679 7993 6.575162 AACAATACAACTGAACTGAATCCC 57.425 37.500 0.00 0.00 0.00 3.85
4724 8038 6.259608 GGTATCAGTCCAGACATGATTTTCTG 59.740 42.308 0.00 1.44 39.25 3.02
4769 8083 8.870879 ACTAAATAAATAACTCGAGCACTGAAC 58.129 33.333 13.61 0.00 0.00 3.18
4892 8206 3.151022 GCCGAGTGAGAGAGGGGG 61.151 72.222 0.00 0.00 0.00 5.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.