AutoCloner

Multiple sequence alignment - TraesCS2D01G526700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2D01G526700	chr2D	100.000	3095	0	0	1	3095	614842863	614845957	0.000000e+00	5716.0
1	TraesCS2D01G526700	chr2D	85.828	628	83	3	1473	2094	614853908	614853281	0.000000e+00	662.0
2	TraesCS2D01G526700	chr2D	83.042	743	109	13	1473	2212	649677318	649678046	0.000000e+00	658.0
3	TraesCS2D01G526700	chr2B	95.280	2521	70	15	1	2520	749229873	749232345	0.000000e+00	3951.0
4	TraesCS2D01G526700	chr2B	94.058	589	17	5	2508	3095	749232307	749232878	0.000000e+00	878.0
5	TraesCS2D01G526700	chr2B	86.146	628	81	3	1473	2094	749238549	749237922	0.000000e+00	673.0
6	TraesCS2D01G526700	chr2B	82.739	533	87	5	1	530	638763124	638763654	1.300000e-128	470.0
7	TraesCS2D01G526700	chr2B	74.070	833	163	34	999	1818	749302028	749302820	3.020000e-75	292.0
8	TraesCS2D01G526700	chr7D	90.580	1327	107	9	1000	2310	511213210	511214534	0.000000e+00	1742.0
9	TraesCS2D01G526700	chr7D	84.934	531	74	6	4	530	159709644	159709116	1.630000e-147	532.0
10	TraesCS2D01G526700	chr7D	92.135	89	7	0	528	616	511192721	511192809	3.240000e-25	126.0
11	TraesCS2D01G526700	chr7D	84.615	78	4	3	877	946	511192946	511193023	1.540000e-08	71.3
12	TraesCS2D01G526700	chr7D	93.478	46	3	0	753	798	511192861	511192906	5.540000e-08	69.4
13	TraesCS2D01G526700	chrUn	90.278	576	40	10	2522	3095	100333543	100332982	0.000000e+00	739.0
14	TraesCS2D01G526700	chrUn	88.701	177	17	2	2333	2506	100333695	100333519	2.420000e-51	213.0
15	TraesCS2D01G526700	chr2A	82.845	717	113	7	1473	2188	775186657	775185950	4.350000e-178	634.0
16	TraesCS2D01G526700	chr6A	87.746	457	49	6	1	455	66277085	66277536	7.600000e-146	527.0
17	TraesCS2D01G526700	chr6A	75.240	626	134	11	1473	2098	609091884	609092488	8.450000e-71	278.0
18	TraesCS2D01G526700	chr5B	84.762	525	77	3	1	523	659710616	659711139	9.830000e-145	523.0
19	TraesCS2D01G526700	chr5B	80.511	313	57	4	1770	2080	610868137	610868447	1.430000e-58	237.0
20	TraesCS2D01G526700	chr5D	86.412	471	56	7	1	467	383742110	383742576	2.750000e-140	508.0
21	TraesCS2D01G526700	chr5D	78.629	248	47	5	1476	1720	494680703	494680947	3.190000e-35	159.0
22	TraesCS2D01G526700	chr1B	83.955	536	80	6	1	533	594063674	594063142	2.750000e-140	508.0
23	TraesCS2D01G526700	chr4B	84.252	508	69	7	9	509	649840521	649841024	4.640000e-133	484.0
24	TraesCS2D01G526700	chr4B	83.271	532	82	4	1	525	577009671	577010202	1.670000e-132	483.0
25	TraesCS2D01G526700	chr5A	77.470	253	49	7	1472	1720	618159253	618159501	8.950000e-31	145.0
26	TraesCS2D01G526700	chr5A	76.630	184	33	8	999	1177	618301609	618301787	3.290000e-15	93.5

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2D01G526700	chr2D	614842863	614845957	3094	False	5716.0	5716	100.0000	1	3095	1	chr2D.!!$F1	3094
1	TraesCS2D01G526700	chr2D	614853281	614853908	627	True	662.0	662	85.8280	1473	2094	1	chr2D.!!$R1	621
2	TraesCS2D01G526700	chr2D	649677318	649678046	728	False	658.0	658	83.0420	1473	2212	1	chr2D.!!$F2	739
3	TraesCS2D01G526700	chr2B	749229873	749232878	3005	False	2414.5	3951	94.6690	1	3095	2	chr2B.!!$F3	3094
4	TraesCS2D01G526700	chr2B	749237922	749238549	627	True	673.0	673	86.1460	1473	2094	1	chr2B.!!$R1	621
5	TraesCS2D01G526700	chr2B	638763124	638763654	530	False	470.0	470	82.7390	1	530	1	chr2B.!!$F1	529
6	TraesCS2D01G526700	chr2B	749302028	749302820	792	False	292.0	292	74.0700	999	1818	1	chr2B.!!$F2	819
7	TraesCS2D01G526700	chr7D	511213210	511214534	1324	False	1742.0	1742	90.5800	1000	2310	1	chr7D.!!$F1	1310
8	TraesCS2D01G526700	chr7D	159709116	159709644	528	True	532.0	532	84.9340	4	530	1	chr7D.!!$R1	526
9	TraesCS2D01G526700	chrUn	100332982	100333695	713	True	476.0	739	89.4895	2333	3095	2	chrUn.!!$R1	762
10	TraesCS2D01G526700	chr2A	775185950	775186657	707	True	634.0	634	82.8450	1473	2188	1	chr2A.!!$R1	715
11	TraesCS2D01G526700	chr6A	609091884	609092488	604	False	278.0	278	75.2400	1473	2098	1	chr6A.!!$F2	625
12	TraesCS2D01G526700	chr5B	659710616	659711139	523	False	523.0	523	84.7620	1	523	1	chr5B.!!$F2	522
13	TraesCS2D01G526700	chr1B	594063142	594063674	532	True	508.0	508	83.9550	1	533	1	chr1B.!!$R1	532
14	TraesCS2D01G526700	chr4B	649840521	649841024	503	False	484.0	484	84.2520	9	509	1	chr4B.!!$F2	500
15	TraesCS2D01G526700	chr4B	577009671	577010202	531	False	483.0	483	83.2710	1	525	1	chr4B.!!$F1	524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
314	321	1.228459	GGGTTTGAGGGCGTTTCCT	60.228	57.895	0.0	0.0	40.43	3.36	F
1144	1165	0.468226	TTTCAGCGTTGGAGGTCACT	59.532	50.000	0.0	0.0	0.00	3.41	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1532	1562	1.332904	CGACAAGAAAGGTGACGTTGC	60.333	52.381	0.0	0.0	29.98	4.17	R
2548	2592	0.689745	TGGTTATCCACCCCCTCTCG	60.690	60.000	0.0	0.0	46.68	4.04	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
38	39	1.964891	CGCGTCTAGCCCGGATCTA	60.965	63.158	0.73	2.81	44.76	1.98
54	55	2.791347	TCTACTCAAGGAGCTCGAGT	57.209	50.000	21.51	21.51	42.49	4.18
126	128	2.117156	GGCTACTAGGCGGACGTGA	61.117	63.158	0.00	0.00	0.00	4.35
289	296	1.893544	ACAGAGGAGACGAGTTTCGA	58.106	50.000	5.38	0.00	43.74	3.71
314	321	1.228459	GGGTTTGAGGGCGTTTCCT	60.228	57.895	0.00	0.00	40.43	3.36
525	545	2.609046	AGGTCCACCTGTAGATGCC	58.391	57.895	0.00	0.00	46.55	4.40
580	601	1.360551	CCGTCGATCCGCTTCTCAT	59.639	57.895	0.00	0.00	0.00	2.90
591	612	1.656095	CGCTTCTCATCAAACTCGTCC	59.344	52.381	0.00	0.00	0.00	4.79
630	651	5.446260	TTCCTAATTAGTTTGGAGGTCCC	57.554	43.478	11.50	0.00	39.75	4.46
631	652	4.440808	TCCTAATTAGTTTGGAGGTCCCA	58.559	43.478	11.50	0.00	44.93	4.37
632	653	5.043762	TCCTAATTAGTTTGGAGGTCCCAT	58.956	41.667	11.50	0.00	46.10	4.00
633	654	6.214278	TCCTAATTAGTTTGGAGGTCCCATA	58.786	40.000	11.50	0.00	46.10	2.74
634	655	6.100714	TCCTAATTAGTTTGGAGGTCCCATAC	59.899	42.308	11.50	0.00	46.10	2.39
635	656	5.789574	AATTAGTTTGGAGGTCCCATACA	57.210	39.130	0.00	0.00	45.70	2.29
636	657	5.994416	ATTAGTTTGGAGGTCCCATACAT	57.006	39.130	0.00	0.00	45.70	2.29
637	658	7.460214	AATTAGTTTGGAGGTCCCATACATA	57.540	36.000	0.00	0.00	45.70	2.29
638	659	4.772886	AGTTTGGAGGTCCCATACATAC	57.227	45.455	0.00	0.00	45.70	2.39
639	660	4.108570	AGTTTGGAGGTCCCATACATACA	58.891	43.478	0.00	0.00	45.70	2.29
640	661	4.726825	AGTTTGGAGGTCCCATACATACAT	59.273	41.667	0.00	0.00	45.70	2.29
641	662	5.908831	AGTTTGGAGGTCCCATACATACATA	59.091	40.000	0.00	0.00	45.70	2.29
642	663	5.818678	TTGGAGGTCCCATACATACATAC	57.181	43.478	0.00	0.00	46.10	2.39
643	664	4.821940	TGGAGGTCCCATACATACATACA	58.178	43.478	0.00	0.00	40.82	2.29
644	665	5.411493	TGGAGGTCCCATACATACATACAT	58.589	41.667	0.00	0.00	40.82	2.29
645	666	6.566914	TGGAGGTCCCATACATACATACATA	58.433	40.000	0.00	0.00	40.82	2.29
646	667	6.439375	TGGAGGTCCCATACATACATACATAC	59.561	42.308	0.00	0.00	40.82	2.39
647	668	6.439375	GGAGGTCCCATACATACATACATACA	59.561	42.308	0.00	0.00	34.14	2.29
648	669	7.125811	GGAGGTCCCATACATACATACATACAT	59.874	40.741	0.00	0.00	34.14	2.29
649	670	9.197306	GAGGTCCCATACATACATACATACATA	57.803	37.037	0.00	0.00	0.00	2.29
650	671	8.978472	AGGTCCCATACATACATACATACATAC	58.022	37.037	0.00	0.00	0.00	2.39
651	672	8.755028	GGTCCCATACATACATACATACATACA	58.245	37.037	0.00	0.00	0.00	2.29
730	751	3.048600	AGGGGAAATCTTGATCGATGGA	58.951	45.455	0.54	0.00	0.00	3.41
882	903	4.691860	ATCAACACAGCAGAGCAATAAC	57.308	40.909	0.00	0.00	0.00	1.89
943	964	2.006888	GGGCAATTTCGTCGAGAATCA	58.993	47.619	0.00	0.00	38.86	2.57
970	991	5.236478	GGACGTCAACACCATTATCCATTAG	59.764	44.000	18.91	0.00	0.00	1.73
971	992	4.574828	ACGTCAACACCATTATCCATTAGC	59.425	41.667	0.00	0.00	0.00	3.09
972	993	4.024048	CGTCAACACCATTATCCATTAGCC	60.024	45.833	0.00	0.00	0.00	3.93
973	994	4.887071	GTCAACACCATTATCCATTAGCCA	59.113	41.667	0.00	0.00	0.00	4.75
974	995	5.359576	GTCAACACCATTATCCATTAGCCAA	59.640	40.000	0.00	0.00	0.00	4.52
975	996	6.040842	GTCAACACCATTATCCATTAGCCAAT	59.959	38.462	0.00	0.00	0.00	3.16
976	997	6.265196	TCAACACCATTATCCATTAGCCAATC	59.735	38.462	0.00	0.00	0.00	2.67
977	998	5.957132	ACACCATTATCCATTAGCCAATCT	58.043	37.500	0.00	0.00	0.00	2.40
978	999	6.006449	ACACCATTATCCATTAGCCAATCTC	58.994	40.000	0.00	0.00	0.00	2.75
979	1000	6.183361	ACACCATTATCCATTAGCCAATCTCT	60.183	38.462	0.00	0.00	0.00	3.10
980	1001	6.718454	CACCATTATCCATTAGCCAATCTCTT	59.282	38.462	0.00	0.00	0.00	2.85
981	1002	6.944862	ACCATTATCCATTAGCCAATCTCTTC	59.055	38.462	0.00	0.00	0.00	2.87
982	1003	7.173722	CCATTATCCATTAGCCAATCTCTTCT	58.826	38.462	0.00	0.00	0.00	2.85
983	1004	7.336427	CCATTATCCATTAGCCAATCTCTTCTC	59.664	40.741	0.00	0.00	0.00	2.87
984	1005	7.623999	TTATCCATTAGCCAATCTCTTCTCT	57.376	36.000	0.00	0.00	0.00	3.10
1144	1165	0.468226	TTTCAGCGTTGGAGGTCACT	59.532	50.000	0.00	0.00	0.00	3.41
1159	1180	1.066143	GTCACTACTGGGTCATGGTGG	60.066	57.143	0.00	0.00	0.00	4.61
1532	1562	1.901159	CCTAGAGAGCATGGATGGAGG	59.099	57.143	0.00	0.00	0.00	4.30
1534	1564	0.693430	AGAGAGCATGGATGGAGGCA	60.693	55.000	0.00	0.00	0.00	4.75
2073	2109	3.489059	CGGATACAATGAAAGCGGCAAAT	60.489	43.478	1.45	0.00	0.00	2.32
2224	2265	5.105310	AGTGCTATCTATGTTCGTTCCTTGT	60.105	40.000	0.00	0.00	0.00	3.16
2519	2563	4.339809	CGTGCGTGAGTGCGTGTG	62.340	66.667	0.00	0.00	37.81	3.82
2520	2564	3.261951	GTGCGTGAGTGCGTGTGT	61.262	61.111	0.00	0.00	37.81	3.72
2521	2565	3.261216	TGCGTGAGTGCGTGTGTG	61.261	61.111	0.00	0.00	37.81	3.82
2522	2566	3.261951	GCGTGAGTGCGTGTGTGT	61.262	61.111	0.00	0.00	0.00	3.72
2523	2567	2.620459	CGTGAGTGCGTGTGTGTG	59.380	61.111	0.00	0.00	0.00	3.82
2524	2568	2.164663	CGTGAGTGCGTGTGTGTGT	61.165	57.895	0.00	0.00	0.00	3.72
2525	2569	1.348250	GTGAGTGCGTGTGTGTGTG	59.652	57.895	0.00	0.00	0.00	3.82
2526	2570	1.079474	TGAGTGCGTGTGTGTGTGT	60.079	52.632	0.00	0.00	0.00	3.72
2527	2571	1.348250	GAGTGCGTGTGTGTGTGTG	59.652	57.895	0.00	0.00	0.00	3.82
2528	2572	2.277247	GTGCGTGTGTGTGTGTGC	60.277	61.111	0.00	0.00	0.00	4.57
2529	2573	3.858989	TGCGTGTGTGTGTGTGCG	61.859	61.111	0.00	0.00	0.00	5.34
2530	2574	3.860125	GCGTGTGTGTGTGTGCGT	61.860	61.111	0.00	0.00	0.00	5.24
2591	2635	7.243487	CACCATGATCATTGTTAGTACACAAC	58.757	38.462	9.62	2.69	39.48	3.32
2606	2650	1.267806	CACAACTGGGAGACATTGTGC	59.732	52.381	0.00	0.00	39.42	4.57
2638	2682	0.884704	CCTCGAATAATGTGGCGGGG	60.885	60.000	0.00	0.00	38.13	5.73
2718	2763	4.626046	GCTCGGGTAAGGGGTGTTATTAAA	60.626	45.833	0.00	0.00	0.00	1.52
2732	2777	7.880713	GGGTGTTATTAAAAATGGTCAATGGTT	59.119	33.333	0.00	0.00	0.00	3.67
2733	2778	9.930693	GGTGTTATTAAAAATGGTCAATGGTTA	57.069	29.630	0.00	0.00	0.00	2.85
2973	3019	8.557592	ACTGCATATATCTCCAATAACATGTG	57.442	34.615	0.00	0.00	0.00	3.21

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
54	55	1.600511	TTATGACGCTGGAGCACCGA	61.601	55.000	0.00	0.00	42.21	4.69
71	72	1.475034	GGGTGATGAGCGAGCCATTTA	60.475	52.381	0.00	0.00	0.00	1.40
126	128	1.600916	GCCGCCACTTTTCACTCCT	60.601	57.895	0.00	0.00	0.00	3.69
150	155	3.127548	CCACATTTTCATCTTCCTGTCCG	59.872	47.826	0.00	0.00	0.00	4.79
151	156	4.335416	TCCACATTTTCATCTTCCTGTCC	58.665	43.478	0.00	0.00	0.00	4.02
152	157	5.163581	CCATCCACATTTTCATCTTCCTGTC	60.164	44.000	0.00	0.00	0.00	3.51
203	208	2.543653	GCATTGCCCGGCTATTTAAGTG	60.544	50.000	11.61	0.00	0.00	3.16
314	321	2.525629	TGACGAAGGGTCCCAGCA	60.526	61.111	11.55	0.00	45.46	4.41
374	393	6.226787	CACTCTCCATATCCAGTCCAAATAC	58.773	44.000	0.00	0.00	0.00	1.89
457	476	1.227380	GCTCGATCACTGCCCGATT	60.227	57.895	0.00	0.00	0.00	3.34
525	545	9.495572	CCTAGACTCATTTAATAAGCCTTAAGG	57.504	37.037	17.81	17.81	38.53	2.69
657	678	9.582648	TGTCCTAGTACATGTATGTATGTATGT	57.417	33.333	9.18	0.00	44.25	2.29
701	722	5.822519	CGATCAAGATTTCCCCTAACATCAA	59.177	40.000	0.00	0.00	0.00	2.57
702	723	5.130311	TCGATCAAGATTTCCCCTAACATCA	59.870	40.000	0.00	0.00	0.00	3.07
730	751	3.118531	ACTCTGGCTATGGAAACCTCAT	58.881	45.455	0.00	0.00	0.00	2.90
882	903	1.002900	ACGAAACACGCTGGTTGATTG	60.003	47.619	0.00	0.00	46.94	2.67
928	949	3.512680	GTCCACTGATTCTCGACGAAAT	58.487	45.455	0.00	2.16	34.79	2.17
943	964	3.596214	GATAATGGTGTTGACGTCCACT	58.404	45.455	19.28	0.43	33.91	4.00
970	991	4.768583	AGATTGACAGAGAAGAGATTGGC	58.231	43.478	0.00	0.00	0.00	4.52
971	992	6.224665	AGAGATTGACAGAGAAGAGATTGG	57.775	41.667	0.00	0.00	0.00	3.16
972	993	7.549839	AGAAGAGATTGACAGAGAAGAGATTG	58.450	38.462	0.00	0.00	0.00	2.67
973	994	7.396907	TGAGAAGAGATTGACAGAGAAGAGATT	59.603	37.037	0.00	0.00	0.00	2.40
974	995	6.891361	TGAGAAGAGATTGACAGAGAAGAGAT	59.109	38.462	0.00	0.00	0.00	2.75
975	996	6.244654	TGAGAAGAGATTGACAGAGAAGAGA	58.755	40.000	0.00	0.00	0.00	3.10
976	997	6.513806	TGAGAAGAGATTGACAGAGAAGAG	57.486	41.667	0.00	0.00	0.00	2.85
977	998	6.907853	TTGAGAAGAGATTGACAGAGAAGA	57.092	37.500	0.00	0.00	0.00	2.87
978	999	6.535865	CCATTGAGAAGAGATTGACAGAGAAG	59.464	42.308	0.00	0.00	0.00	2.85
979	1000	6.404708	CCATTGAGAAGAGATTGACAGAGAA	58.595	40.000	0.00	0.00	0.00	2.87
980	1001	5.626347	GCCATTGAGAAGAGATTGACAGAGA	60.626	44.000	0.00	0.00	0.00	3.10
981	1002	4.571580	GCCATTGAGAAGAGATTGACAGAG	59.428	45.833	0.00	0.00	0.00	3.35
982	1003	4.019950	TGCCATTGAGAAGAGATTGACAGA	60.020	41.667	0.00	0.00	0.00	3.41
983	1004	4.259356	TGCCATTGAGAAGAGATTGACAG	58.741	43.478	0.00	0.00	0.00	3.51
984	1005	4.019950	TCTGCCATTGAGAAGAGATTGACA	60.020	41.667	0.00	0.00	0.00	3.58
1532	1562	1.332904	CGACAAGAAAGGTGACGTTGC	60.333	52.381	0.00	0.00	29.98	4.17
1534	1564	1.578583	CCGACAAGAAAGGTGACGTT	58.421	50.000	0.00	0.00	33.32	3.99
1628	1658	3.507162	TGTTGGCTTTCTCCTTCATCA	57.493	42.857	0.00	0.00	0.00	3.07
2224	2265	4.075682	TCGCCAATAAACATCAGAACCAA	58.924	39.130	0.00	0.00	0.00	3.67
2505	2549	3.261951	ACACACACGCACTCACGC	61.262	61.111	0.00	0.00	36.19	5.34
2506	2550	2.164663	ACACACACACGCACTCACG	61.165	57.895	0.00	0.00	39.50	4.35
2507	2551	1.348250	CACACACACACGCACTCAC	59.652	57.895	0.00	0.00	0.00	3.51
2508	2552	1.079474	ACACACACACACGCACTCA	60.079	52.632	0.00	0.00	0.00	3.41
2509	2553	1.348250	CACACACACACACGCACTC	59.652	57.895	0.00	0.00	0.00	3.51
2510	2554	2.749865	GCACACACACACACGCACT	61.750	57.895	0.00	0.00	0.00	4.40
2511	2555	2.277247	GCACACACACACACGCAC	60.277	61.111	0.00	0.00	0.00	5.34
2512	2556	3.858989	CGCACACACACACACGCA	61.859	61.111	0.00	0.00	0.00	5.24
2513	2557	3.860125	ACGCACACACACACACGC	61.860	61.111	0.00	0.00	0.00	5.34
2514	2558	2.021243	CACGCACACACACACACG	59.979	61.111	0.00	0.00	0.00	4.49
2515	2559	2.277247	GCACGCACACACACACAC	60.277	61.111	0.00	0.00	0.00	3.82
2516	2560	3.858989	CGCACGCACACACACACA	61.859	61.111	0.00	0.00	0.00	3.72
2517	2561	3.860125	ACGCACGCACACACACAC	61.860	61.111	0.00	0.00	0.00	3.82
2518	2562	3.858989	CACGCACGCACACACACA	61.859	61.111	0.00	0.00	0.00	3.72
2548	2592	0.689745	TGGTTATCCACCCCCTCTCG	60.690	60.000	0.00	0.00	46.68	4.04
2591	2635	1.746615	CCCGCACAATGTCTCCCAG	60.747	63.158	0.00	0.00	0.00	4.45
2718	2763	6.921412	TGAGGGATATAACCATTGACCATTT	58.079	36.000	0.99	0.00	0.00	2.32

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.