Multiple sequence alignment - TraesCS2D01G525500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G525500 chr2D 100.000 5279 0 0 1 5279 613431142 613436420 0.000000e+00 9749.0
1 TraesCS2D01G525500 chr2D 86.408 206 15 10 1692 1885 317234727 317234523 4.140000e-51 213.0
2 TraesCS2D01G525500 chr2D 85.821 134 9 6 119 246 613426993 613427122 3.320000e-27 134.0
3 TraesCS2D01G525500 chr2B 95.099 1979 71 12 3306 5279 748973443 748975400 0.000000e+00 3094.0
4 TraesCS2D01G525500 chr2B 89.944 895 81 6 2041 2929 748972193 748973084 0.000000e+00 1146.0
5 TraesCS2D01G525500 chr2B 90.798 815 33 24 612 1411 748971336 748972123 0.000000e+00 1051.0
6 TraesCS2D01G525500 chr2B 91.727 556 26 9 64 615 748948319 748948858 0.000000e+00 754.0
7 TraesCS2D01G525500 chr2B 89.067 375 29 8 2925 3298 748973038 748973401 6.230000e-124 455.0
8 TraesCS2D01G525500 chr2B 86.029 136 7 4 119 246 748938788 748938919 9.220000e-28 135.0
9 TraesCS2D01G525500 chr2A 95.309 1961 64 7 3321 5279 745026230 745028164 0.000000e+00 3086.0
10 TraesCS2D01G525500 chr2A 85.620 1057 80 24 1883 2929 745024857 745025851 0.000000e+00 1044.0
11 TraesCS2D01G525500 chr2A 88.115 732 38 19 810 1539 745023943 745024627 0.000000e+00 824.0
12 TraesCS2D01G525500 chr2A 90.133 375 27 7 2925 3298 745025805 745026170 3.700000e-131 479.0
13 TraesCS2D01G525500 chr2A 84.586 266 21 7 131 388 745023011 745023264 4.080000e-61 246.0
14 TraesCS2D01G525500 chr2A 97.222 36 0 1 657 692 745023846 745023880 5.710000e-05 60.2
15 TraesCS2D01G525500 chr6D 90.909 583 51 2 2348 2929 75851423 75852004 0.000000e+00 782.0
16 TraesCS2D01G525500 chr6D 90.753 584 50 4 2348 2929 313699973 313699392 0.000000e+00 776.0
17 TraesCS2D01G525500 chr6D 90.738 583 51 3 2348 2929 118382551 118381971 0.000000e+00 774.0
18 TraesCS2D01G525500 chr6D 86.966 445 49 6 4575 5014 337685042 337684602 4.750000e-135 492.0
19 TraesCS2D01G525500 chr6D 89.062 192 15 4 4391 4579 337746036 337745848 3.180000e-57 233.0
20 TraesCS2D01G525500 chr3D 90.738 583 52 2 2348 2929 219539454 219540035 0.000000e+00 776.0
21 TraesCS2D01G525500 chr3D 87.048 525 45 11 4391 4908 342127030 342126522 5.930000e-159 571.0
22 TraesCS2D01G525500 chr3D 92.405 79 5 1 4937 5014 342126523 342126445 1.550000e-20 111.0
23 TraesCS2D01G525500 chr4D 90.566 583 53 2 2348 2929 229796292 229795711 0.000000e+00 771.0
24 TraesCS2D01G525500 chr1D 90.598 585 50 5 2348 2929 117993004 117992422 0.000000e+00 771.0
25 TraesCS2D01G525500 chr1D 90.566 583 53 2 2348 2929 187586816 187586235 0.000000e+00 771.0
26 TraesCS2D01G525500 chr6B 90.674 579 52 2 2352 2929 354648243 354648820 0.000000e+00 769.0
27 TraesCS2D01G525500 chr6A 87.005 631 67 10 4391 5013 204935614 204934991 0.000000e+00 697.0
28 TraesCS2D01G525500 chr6A 87.557 442 48 4 4162 4598 301800409 301799970 6.100000e-139 505.0
29 TraesCS2D01G525500 chr6A 85.854 205 17 9 1688 1881 607089162 607089365 1.930000e-49 207.0
30 TraesCS2D01G525500 chr6A 85.854 205 17 9 1688 1881 607224348 607224551 1.930000e-49 207.0
31 TraesCS2D01G525500 chr3B 87.025 632 65 12 4392 5014 314207217 314207840 0.000000e+00 697.0
32 TraesCS2D01G525500 chr5D 86.396 566 56 8 4404 4967 520995440 520994894 2.720000e-167 599.0
33 TraesCS2D01G525500 chr5D 87.685 203 14 6 1689 1881 514563342 514563543 5.320000e-55 226.0
34 TraesCS2D01G525500 chr4A 90.378 291 28 0 4722 5012 377614529 377614239 2.980000e-102 383.0
35 TraesCS2D01G525500 chr7A 88.776 294 33 0 4719 5012 133419282 133419575 1.400000e-95 361.0
36 TraesCS2D01G525500 chr7A 85.714 210 18 9 1692 1889 353071897 353071688 1.490000e-50 211.0
37 TraesCS2D01G525500 chr7D 89.216 204 11 7 1692 1884 618808272 618808069 1.470000e-60 244.0
38 TraesCS2D01G525500 chr1B 88.832 197 11 6 1696 1881 453523011 453523207 1.140000e-56 231.0
39 TraesCS2D01G525500 chr1B 86.829 205 15 8 1692 1884 527770047 527769843 8.900000e-53 219.0
40 TraesCS2D01G525500 chr5A 84.018 219 22 9 1689 1894 665589115 665588897 1.160000e-46 198.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G525500 chr2D 613431142 613436420 5278 False 9749.000000 9749 100.000000 1 5279 1 chr2D.!!$F2 5278
1 TraesCS2D01G525500 chr2B 748971336 748975400 4064 False 1436.500000 3094 91.227000 612 5279 4 chr2B.!!$F3 4667
2 TraesCS2D01G525500 chr2B 748948319 748948858 539 False 754.000000 754 91.727000 64 615 1 chr2B.!!$F2 551
3 TraesCS2D01G525500 chr2A 745023011 745028164 5153 False 956.533333 3086 90.164167 131 5279 6 chr2A.!!$F1 5148
4 TraesCS2D01G525500 chr6D 75851423 75852004 581 False 782.000000 782 90.909000 2348 2929 1 chr6D.!!$F1 581
5 TraesCS2D01G525500 chr6D 313699392 313699973 581 True 776.000000 776 90.753000 2348 2929 1 chr6D.!!$R2 581
6 TraesCS2D01G525500 chr6D 118381971 118382551 580 True 774.000000 774 90.738000 2348 2929 1 chr6D.!!$R1 581
7 TraesCS2D01G525500 chr3D 219539454 219540035 581 False 776.000000 776 90.738000 2348 2929 1 chr3D.!!$F1 581
8 TraesCS2D01G525500 chr3D 342126445 342127030 585 True 341.000000 571 89.726500 4391 5014 2 chr3D.!!$R1 623
9 TraesCS2D01G525500 chr4D 229795711 229796292 581 True 771.000000 771 90.566000 2348 2929 1 chr4D.!!$R1 581
10 TraesCS2D01G525500 chr1D 117992422 117993004 582 True 771.000000 771 90.598000 2348 2929 1 chr1D.!!$R1 581
11 TraesCS2D01G525500 chr1D 187586235 187586816 581 True 771.000000 771 90.566000 2348 2929 1 chr1D.!!$R2 581
12 TraesCS2D01G525500 chr6B 354648243 354648820 577 False 769.000000 769 90.674000 2352 2929 1 chr6B.!!$F1 577
13 TraesCS2D01G525500 chr6A 204934991 204935614 623 True 697.000000 697 87.005000 4391 5013 1 chr6A.!!$R1 622
14 TraesCS2D01G525500 chr3B 314207217 314207840 623 False 697.000000 697 87.025000 4392 5014 1 chr3B.!!$F1 622
15 TraesCS2D01G525500 chr5D 520994894 520995440 546 True 599.000000 599 86.396000 4404 4967 1 chr5D.!!$R1 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
806 1149 0.098025 CTCTTGCGTCTCCTCTCGTC 59.902 60.000 0.00 0.0 0.00 4.20 F
1667 2107 0.033405 CCTTCGGTCAGGAGGGAGTA 60.033 60.000 0.00 0.0 35.29 2.59 F
1736 2176 0.106669 AAAATAAGCCGCCTCCTCCC 60.107 55.000 0.00 0.0 0.00 4.30 F
1775 2215 0.107017 CTCCGTCATTCATTGGGGCT 60.107 55.000 0.00 0.0 0.00 5.19 F
3151 3622 0.035820 TTTTATCCGCGTGCCTTCCT 60.036 50.000 4.92 0.0 0.00 3.36 F
3186 3657 0.546122 TGGTTGAGCAGTCTGTTGGT 59.454 50.000 0.93 0.0 0.00 3.67 F
3801 4310 1.127213 GCAATTTGAGTTTGGCATGCG 59.873 47.619 12.44 0.0 0.00 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1717 2157 0.106669 GGGAGGAGGCGGCTTATTTT 60.107 55.000 14.76 0.00 0.00 1.82 R
3132 3603 0.035820 AGGAAGGCACGCGGATAAAA 60.036 50.000 12.47 0.00 0.00 1.52 R
3141 3612 0.588252 CACTGTCAAAGGAAGGCACG 59.412 55.000 0.00 0.00 0.00 5.34 R
3339 3846 1.843368 CATGCAGGTTTGAGGTGGAT 58.157 50.000 0.00 0.00 0.00 3.41 R
3987 4496 1.682087 GGTGGACCATGTAGGCCTTTC 60.682 57.143 12.58 5.51 43.14 2.62 R
4027 4536 4.097286 AGCAATGGTGTAAAAACTGAACGT 59.903 37.500 0.00 0.00 0.00 3.99 R
5234 5755 2.094258 CGTGTGTGTAGCCTGCATTTAG 59.906 50.000 0.00 0.00 0.00 1.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.897271 TTTTATGCTGGGAAGAGGCA 57.103 45.000 0.00 0.00 40.32 4.75
30 31 2.425143 TTTATGCTGGGAAGAGGCAG 57.575 50.000 0.00 0.00 39.38 4.85
31 32 0.107017 TTATGCTGGGAAGAGGCAGC 60.107 55.000 0.00 0.00 39.38 5.25
32 33 0.984961 TATGCTGGGAAGAGGCAGCT 60.985 55.000 0.00 0.00 40.93 4.24
33 34 1.860944 ATGCTGGGAAGAGGCAGCTT 61.861 55.000 0.00 0.00 40.93 3.74
34 35 1.200760 TGCTGGGAAGAGGCAGCTTA 61.201 55.000 0.00 0.00 40.93 3.09
35 36 0.182299 GCTGGGAAGAGGCAGCTTAT 59.818 55.000 0.00 0.00 37.66 1.73
36 37 1.409381 GCTGGGAAGAGGCAGCTTATT 60.409 52.381 0.00 0.00 37.66 1.40
37 38 2.947695 GCTGGGAAGAGGCAGCTTATTT 60.948 50.000 0.00 0.00 37.66 1.40
38 39 3.359950 CTGGGAAGAGGCAGCTTATTTT 58.640 45.455 0.00 0.00 0.00 1.82
39 40 3.766051 CTGGGAAGAGGCAGCTTATTTTT 59.234 43.478 0.00 0.00 0.00 1.94
61 62 6.887626 TTTAATAAGCCGACCAAAAGAAGT 57.112 33.333 0.00 0.00 0.00 3.01
62 63 7.982761 TTTAATAAGCCGACCAAAAGAAGTA 57.017 32.000 0.00 0.00 0.00 2.24
63 64 7.605410 TTAATAAGCCGACCAAAAGAAGTAG 57.395 36.000 0.00 0.00 0.00 2.57
64 65 1.809684 AGCCGACCAAAAGAAGTAGC 58.190 50.000 0.00 0.00 0.00 3.58
65 66 0.803117 GCCGACCAAAAGAAGTAGCC 59.197 55.000 0.00 0.00 0.00 3.93
66 67 1.450025 CCGACCAAAAGAAGTAGCCC 58.550 55.000 0.00 0.00 0.00 5.19
67 68 1.076332 CGACCAAAAGAAGTAGCCCG 58.924 55.000 0.00 0.00 0.00 6.13
68 69 1.607251 CGACCAAAAGAAGTAGCCCGT 60.607 52.381 0.00 0.00 0.00 5.28
100 101 2.490991 GATCTCCGAAAATAACCCCCG 58.509 52.381 0.00 0.00 0.00 5.73
164 165 2.202362 CACGCTGACTCTCGGACG 60.202 66.667 0.00 0.00 0.00 4.79
167 168 4.838486 GCTGACTCTCGGACGCGG 62.838 72.222 12.47 0.00 0.00 6.46
168 169 4.838486 CTGACTCTCGGACGCGGC 62.838 72.222 12.47 7.53 0.00 6.53
317 324 1.005867 TCAACTAACCCGTGTCCGC 60.006 57.895 0.00 0.00 0.00 5.54
341 348 2.573340 CACCGGATTTGGCTTGGC 59.427 61.111 9.46 0.00 0.00 4.52
374 381 4.636435 AAACGCCCTCCCCGTGTG 62.636 66.667 0.00 0.00 39.13 3.82
459 544 3.236816 GGCACATCATTTTCGTGTTGAG 58.763 45.455 0.00 0.00 33.13 3.02
486 571 3.545078 GCGTCTCGCGAGTAAAAAGATTA 59.455 43.478 33.33 9.37 44.55 1.75
501 589 1.918957 AGATTAGGGTCTTGCTTGGCT 59.081 47.619 0.00 0.00 0.00 4.75
579 674 5.012148 TGGAAGTCCTCAGGTTTTAGAGAAG 59.988 44.000 0.00 0.00 36.82 2.85
584 679 3.006247 CTCAGGTTTTAGAGAAGGCTGC 58.994 50.000 0.00 0.00 33.74 5.25
596 691 6.430962 AGAGAAGGCTGCATCTGATTATAA 57.569 37.500 11.28 0.00 0.00 0.98
597 692 7.018487 AGAGAAGGCTGCATCTGATTATAAT 57.982 36.000 11.28 0.00 0.00 1.28
604 699 7.986320 AGGCTGCATCTGATTATAATCTGATAC 59.014 37.037 31.32 28.01 46.06 2.24
656 981 3.749665 TTTCTTGGGATTTTGTGCTGG 57.250 42.857 0.00 0.00 0.00 4.85
699 1040 0.248458 GCAACCAAACCAGTGACACG 60.248 55.000 0.00 0.00 0.00 4.49
700 1041 1.374560 CAACCAAACCAGTGACACGA 58.625 50.000 0.00 0.00 0.00 4.35
779 1122 4.547367 CCGGCGATCTCCCAACCC 62.547 72.222 9.30 0.00 0.00 4.11
780 1123 3.781307 CGGCGATCTCCCAACCCA 61.781 66.667 0.00 0.00 0.00 4.51
782 1125 2.670148 GGCGATCTCCCAACCCACT 61.670 63.158 0.00 0.00 0.00 4.00
783 1126 1.299976 GCGATCTCCCAACCCACTT 59.700 57.895 0.00 0.00 0.00 3.16
785 1128 1.065709 GCGATCTCCCAACCCACTTTA 60.066 52.381 0.00 0.00 0.00 1.85
786 1129 2.629051 CGATCTCCCAACCCACTTTAC 58.371 52.381 0.00 0.00 0.00 2.01
787 1130 2.679930 CGATCTCCCAACCCACTTTACC 60.680 54.545 0.00 0.00 0.00 2.85
788 1131 2.127651 TCTCCCAACCCACTTTACCT 57.872 50.000 0.00 0.00 0.00 3.08
791 1134 2.375509 CTCCCAACCCACTTTACCTCTT 59.624 50.000 0.00 0.00 0.00 2.85
792 1135 2.107552 TCCCAACCCACTTTACCTCTTG 59.892 50.000 0.00 0.00 0.00 3.02
793 1136 1.886542 CCAACCCACTTTACCTCTTGC 59.113 52.381 0.00 0.00 0.00 4.01
794 1137 1.535462 CAACCCACTTTACCTCTTGCG 59.465 52.381 0.00 0.00 0.00 4.85
796 1139 1.270678 ACCCACTTTACCTCTTGCGTC 60.271 52.381 0.00 0.00 0.00 5.19
797 1140 1.002087 CCCACTTTACCTCTTGCGTCT 59.998 52.381 0.00 0.00 0.00 4.18
798 1141 2.338500 CCACTTTACCTCTTGCGTCTC 58.662 52.381 0.00 0.00 0.00 3.36
799 1142 2.338500 CACTTTACCTCTTGCGTCTCC 58.662 52.381 0.00 0.00 0.00 3.71
800 1143 2.028930 CACTTTACCTCTTGCGTCTCCT 60.029 50.000 0.00 0.00 0.00 3.69
801 1144 2.231721 ACTTTACCTCTTGCGTCTCCTC 59.768 50.000 0.00 0.00 0.00 3.71
802 1145 2.217510 TTACCTCTTGCGTCTCCTCT 57.782 50.000 0.00 0.00 0.00 3.69
803 1146 1.752683 TACCTCTTGCGTCTCCTCTC 58.247 55.000 0.00 0.00 0.00 3.20
804 1147 1.309499 ACCTCTTGCGTCTCCTCTCG 61.309 60.000 0.00 0.00 0.00 4.04
805 1148 1.309499 CCTCTTGCGTCTCCTCTCGT 61.309 60.000 0.00 0.00 0.00 4.18
806 1149 0.098025 CTCTTGCGTCTCCTCTCGTC 59.902 60.000 0.00 0.00 0.00 4.20
807 1150 1.137825 CTTGCGTCTCCTCTCGTCC 59.862 63.158 0.00 0.00 0.00 4.79
808 1151 2.585170 CTTGCGTCTCCTCTCGTCCG 62.585 65.000 0.00 0.00 0.00 4.79
809 1152 4.539881 GCGTCTCCTCTCGTCCGC 62.540 72.222 0.00 0.00 0.00 5.54
810 1153 2.820479 CGTCTCCTCTCGTCCGCT 60.820 66.667 0.00 0.00 0.00 5.52
811 1154 2.400158 CGTCTCCTCTCGTCCGCTT 61.400 63.158 0.00 0.00 0.00 4.68
812 1155 1.430228 GTCTCCTCTCGTCCGCTTC 59.570 63.158 0.00 0.00 0.00 3.86
949 1292 0.753262 GGATGATACACGTGGCTCCT 59.247 55.000 21.57 8.69 0.00 3.69
982 1325 4.813526 CCACTCGCCTCGTCGTCG 62.814 72.222 0.00 0.00 38.55 5.12
1267 1610 3.833442 TGTCGCATGTCAACTAGTAGTG 58.167 45.455 2.90 0.00 0.00 2.74
1269 1612 1.927174 CGCATGTCAACTAGTAGTGCC 59.073 52.381 2.90 0.00 0.00 5.01
1316 1660 8.233190 GCAGCAAAGATTAATATTAGTGCTAGG 58.767 37.037 17.31 10.29 38.97 3.02
1351 1695 6.066032 AGATGATATTGCCATGTCAATGACA 58.934 36.000 19.08 19.08 46.90 3.58
1427 1788 2.094182 GTGTCCCGCTCTTGTGATCTTA 60.094 50.000 0.00 0.00 0.00 2.10
1428 1789 2.766263 TGTCCCGCTCTTGTGATCTTAT 59.234 45.455 0.00 0.00 0.00 1.73
1429 1790 3.197766 TGTCCCGCTCTTGTGATCTTATT 59.802 43.478 0.00 0.00 0.00 1.40
1430 1791 3.804873 GTCCCGCTCTTGTGATCTTATTC 59.195 47.826 0.00 0.00 0.00 1.75
1431 1792 3.450817 TCCCGCTCTTGTGATCTTATTCA 59.549 43.478 0.00 0.00 0.00 2.57
1432 1793 4.101585 TCCCGCTCTTGTGATCTTATTCAT 59.898 41.667 0.00 0.00 0.00 2.57
1433 1794 5.304357 TCCCGCTCTTGTGATCTTATTCATA 59.696 40.000 0.00 0.00 0.00 2.15
1434 1795 6.014242 TCCCGCTCTTGTGATCTTATTCATAT 60.014 38.462 0.00 0.00 0.00 1.78
1436 1797 7.984050 CCCGCTCTTGTGATCTTATTCATATAT 59.016 37.037 0.00 0.00 0.00 0.86
1469 1830 8.784043 GGAGTAGCATTTTTCTGTTTCTTCTTA 58.216 33.333 0.00 0.00 0.00 2.10
1503 1864 7.389803 TGTCAAGAAAATATGGTACCATGTG 57.610 36.000 33.41 19.14 37.82 3.21
1539 1900 4.022416 TGCCTTGAAAATTGCGAGTACAAT 60.022 37.500 0.00 0.00 42.01 2.71
1540 1901 4.324402 GCCTTGAAAATTGCGAGTACAATG 59.676 41.667 0.00 0.00 40.12 2.82
1543 1904 6.808212 CCTTGAAAATTGCGAGTACAATGAAT 59.192 34.615 0.00 0.00 40.12 2.57
1544 1905 7.008628 CCTTGAAAATTGCGAGTACAATGAATC 59.991 37.037 0.00 0.00 40.12 2.52
1545 1906 6.321717 TGAAAATTGCGAGTACAATGAATCC 58.678 36.000 0.00 0.00 40.12 3.01
1584 2023 7.122138 TCCAATAATATGCTTTTGATGGCAA 57.878 32.000 0.00 0.00 41.90 4.52
1596 2035 6.619018 GCTTTTGATGGCAAATAACACATGTG 60.619 38.462 24.25 24.25 43.07 3.21
1623 2063 8.038351 TGATTAGTCATCAAATTAACGACCTGA 58.962 33.333 0.00 0.00 39.11 3.86
1651 2091 0.684153 GCACACCATATGCACCCCTT 60.684 55.000 0.00 0.00 42.88 3.95
1654 2094 0.819259 CACCATATGCACCCCTTCGG 60.819 60.000 0.00 0.00 37.81 4.30
1657 2097 0.180171 CATATGCACCCCTTCGGTCA 59.820 55.000 0.00 0.00 43.58 4.02
1667 2107 0.033405 CCTTCGGTCAGGAGGGAGTA 60.033 60.000 0.00 0.00 35.29 2.59
1680 2120 3.826729 GGAGGGAGTAGCATTTTGTTTGT 59.173 43.478 0.00 0.00 0.00 2.83
1697 2137 9.713713 TTTTGTTTGTTATTTCTTTATAGGGCC 57.286 29.630 0.00 0.00 0.00 5.80
1698 2138 8.423906 TTGTTTGTTATTTCTTTATAGGGCCA 57.576 30.769 6.18 0.00 0.00 5.36
1700 2140 7.672239 TGTTTGTTATTTCTTTATAGGGCCAGT 59.328 33.333 6.18 0.00 0.00 4.00
1701 2141 8.528643 GTTTGTTATTTCTTTATAGGGCCAGTT 58.471 33.333 6.18 0.00 0.00 3.16
1702 2142 8.658840 TTGTTATTTCTTTATAGGGCCAGTTT 57.341 30.769 6.18 0.00 0.00 2.66
1703 2143 8.658840 TGTTATTTCTTTATAGGGCCAGTTTT 57.341 30.769 6.18 0.00 0.00 2.43
1704 2144 9.095700 TGTTATTTCTTTATAGGGCCAGTTTTT 57.904 29.630 6.18 0.00 0.00 1.94
1735 2175 1.763968 AAAAATAAGCCGCCTCCTCC 58.236 50.000 0.00 0.00 0.00 4.30
1736 2176 0.106669 AAAATAAGCCGCCTCCTCCC 60.107 55.000 0.00 0.00 0.00 4.30
1737 2177 1.279025 AAATAAGCCGCCTCCTCCCA 61.279 55.000 0.00 0.00 0.00 4.37
1738 2178 1.700042 AATAAGCCGCCTCCTCCCAG 61.700 60.000 0.00 0.00 0.00 4.45
1742 2182 3.721706 CCGCCTCCTCCCAGCTTT 61.722 66.667 0.00 0.00 0.00 3.51
1743 2183 2.352805 CGCCTCCTCCCAGCTTTT 59.647 61.111 0.00 0.00 0.00 2.27
1744 2184 1.746991 CGCCTCCTCCCAGCTTTTC 60.747 63.158 0.00 0.00 0.00 2.29
1745 2185 1.379176 GCCTCCTCCCAGCTTTTCC 60.379 63.158 0.00 0.00 0.00 3.13
1746 2186 1.304617 CCTCCTCCCAGCTTTTCCC 59.695 63.158 0.00 0.00 0.00 3.97
1747 2187 1.500783 CCTCCTCCCAGCTTTTCCCA 61.501 60.000 0.00 0.00 0.00 4.37
1748 2188 0.627986 CTCCTCCCAGCTTTTCCCAT 59.372 55.000 0.00 0.00 0.00 4.00
1749 2189 1.846439 CTCCTCCCAGCTTTTCCCATA 59.154 52.381 0.00 0.00 0.00 2.74
1750 2190 2.242196 CTCCTCCCAGCTTTTCCCATAA 59.758 50.000 0.00 0.00 0.00 1.90
1751 2191 2.242196 TCCTCCCAGCTTTTCCCATAAG 59.758 50.000 0.00 0.00 0.00 1.73
1752 2192 2.027385 CTCCCAGCTTTTCCCATAAGC 58.973 52.381 0.00 0.00 46.47 3.09
1757 2197 1.751437 GCTTTTCCCATAAGCCGTCT 58.249 50.000 0.00 0.00 41.62 4.18
1758 2198 1.671328 GCTTTTCCCATAAGCCGTCTC 59.329 52.381 0.00 0.00 41.62 3.36
1759 2199 2.289565 CTTTTCCCATAAGCCGTCTCC 58.710 52.381 0.00 0.00 0.00 3.71
1760 2200 0.177141 TTTCCCATAAGCCGTCTCCG 59.823 55.000 0.00 0.00 0.00 4.63
1761 2201 0.974010 TTCCCATAAGCCGTCTCCGT 60.974 55.000 0.00 0.00 0.00 4.69
1762 2202 1.067582 CCCATAAGCCGTCTCCGTC 59.932 63.158 0.00 0.00 0.00 4.79
1763 2203 1.672854 CCCATAAGCCGTCTCCGTCA 61.673 60.000 0.00 0.00 0.00 4.35
1764 2204 0.389391 CCATAAGCCGTCTCCGTCAT 59.611 55.000 0.00 0.00 0.00 3.06
1765 2205 1.202533 CCATAAGCCGTCTCCGTCATT 60.203 52.381 0.00 0.00 0.00 2.57
1766 2206 2.128035 CATAAGCCGTCTCCGTCATTC 58.872 52.381 0.00 0.00 0.00 2.67
1767 2207 1.179152 TAAGCCGTCTCCGTCATTCA 58.821 50.000 0.00 0.00 0.00 2.57
1768 2208 0.537188 AAGCCGTCTCCGTCATTCAT 59.463 50.000 0.00 0.00 0.00 2.57
1769 2209 0.537188 AGCCGTCTCCGTCATTCATT 59.463 50.000 0.00 0.00 0.00 2.57
1770 2210 0.652592 GCCGTCTCCGTCATTCATTG 59.347 55.000 0.00 0.00 0.00 2.82
1771 2211 1.290203 CCGTCTCCGTCATTCATTGG 58.710 55.000 0.00 0.00 0.00 3.16
1772 2212 1.290203 CGTCTCCGTCATTCATTGGG 58.710 55.000 0.00 0.00 0.00 4.12
1773 2213 1.668419 GTCTCCGTCATTCATTGGGG 58.332 55.000 0.00 0.00 0.00 4.96
1774 2214 0.107214 TCTCCGTCATTCATTGGGGC 60.107 55.000 0.00 0.00 0.00 5.80
1775 2215 0.107017 CTCCGTCATTCATTGGGGCT 60.107 55.000 0.00 0.00 0.00 5.19
1776 2216 0.331278 TCCGTCATTCATTGGGGCTT 59.669 50.000 0.00 0.00 0.00 4.35
1777 2217 1.185315 CCGTCATTCATTGGGGCTTT 58.815 50.000 0.00 0.00 0.00 3.51
1778 2218 1.550072 CCGTCATTCATTGGGGCTTTT 59.450 47.619 0.00 0.00 0.00 2.27
1779 2219 2.609350 CGTCATTCATTGGGGCTTTTG 58.391 47.619 0.00 0.00 0.00 2.44
1780 2220 2.230992 CGTCATTCATTGGGGCTTTTGA 59.769 45.455 0.00 0.00 0.00 2.69
1781 2221 3.305950 CGTCATTCATTGGGGCTTTTGAA 60.306 43.478 0.00 0.00 33.06 2.69
1782 2222 4.621274 CGTCATTCATTGGGGCTTTTGAAT 60.621 41.667 0.00 0.00 38.89 2.57
1783 2223 5.394005 CGTCATTCATTGGGGCTTTTGAATA 60.394 40.000 0.00 0.00 36.84 1.75
1784 2224 6.044682 GTCATTCATTGGGGCTTTTGAATAG 58.955 40.000 0.00 0.00 36.84 1.73
1785 2225 5.721000 TCATTCATTGGGGCTTTTGAATAGT 59.279 36.000 0.00 0.00 36.84 2.12
1786 2226 6.213195 TCATTCATTGGGGCTTTTGAATAGTT 59.787 34.615 0.00 0.00 36.84 2.24
1787 2227 6.432403 TTCATTGGGGCTTTTGAATAGTTT 57.568 33.333 0.00 0.00 0.00 2.66
1788 2228 7.546250 TTCATTGGGGCTTTTGAATAGTTTA 57.454 32.000 0.00 0.00 0.00 2.01
1789 2229 7.546250 TCATTGGGGCTTTTGAATAGTTTAA 57.454 32.000 0.00 0.00 0.00 1.52
1790 2230 7.382898 TCATTGGGGCTTTTGAATAGTTTAAC 58.617 34.615 0.00 0.00 0.00 2.01
1791 2231 6.987403 TTGGGGCTTTTGAATAGTTTAACT 57.013 33.333 2.32 2.32 0.00 2.24
1792 2232 8.527810 CATTGGGGCTTTTGAATAGTTTAACTA 58.472 33.333 7.32 7.32 34.82 2.24
1793 2233 8.480133 TTGGGGCTTTTGAATAGTTTAACTAA 57.520 30.769 8.99 0.00 33.89 2.24
1794 2234 8.658840 TGGGGCTTTTGAATAGTTTAACTAAT 57.341 30.769 8.99 0.18 33.89 1.73
1795 2235 9.095700 TGGGGCTTTTGAATAGTTTAACTAATT 57.904 29.630 8.99 4.57 33.89 1.40
1796 2236 9.938280 GGGGCTTTTGAATAGTTTAACTAATTT 57.062 29.630 8.99 0.00 33.89 1.82
1844 2284 6.869315 GCTTATTTTTAAGCTAGGGAGAGG 57.131 41.667 9.83 0.00 46.49 3.69
1845 2285 6.358178 GCTTATTTTTAAGCTAGGGAGAGGT 58.642 40.000 9.83 0.00 46.49 3.85
1846 2286 7.506971 GCTTATTTTTAAGCTAGGGAGAGGTA 58.493 38.462 9.83 0.00 46.49 3.08
1847 2287 7.658167 GCTTATTTTTAAGCTAGGGAGAGGTAG 59.342 40.741 9.83 0.00 46.49 3.18
1848 2288 5.354842 TTTTTAAGCTAGGGAGAGGTAGC 57.645 43.478 0.00 0.00 41.77 3.58
1852 2292 1.783071 GCTAGGGAGAGGTAGCTTGT 58.217 55.000 0.00 0.00 38.92 3.16
1853 2293 2.112190 GCTAGGGAGAGGTAGCTTGTT 58.888 52.381 0.00 0.00 38.92 2.83
1854 2294 2.502130 GCTAGGGAGAGGTAGCTTGTTT 59.498 50.000 0.00 0.00 38.92 2.83
1855 2295 3.055021 GCTAGGGAGAGGTAGCTTGTTTT 60.055 47.826 0.00 0.00 38.92 2.43
1856 2296 4.565861 GCTAGGGAGAGGTAGCTTGTTTTT 60.566 45.833 0.00 0.00 38.92 1.94
1873 2313 3.821421 TTTTTAAGCCGCCCAAAAGAA 57.179 38.095 0.00 0.00 0.00 2.52
1874 2314 2.804697 TTTAAGCCGCCCAAAAGAAC 57.195 45.000 0.00 0.00 0.00 3.01
1875 2315 1.989706 TTAAGCCGCCCAAAAGAACT 58.010 45.000 0.00 0.00 0.00 3.01
1876 2316 1.243902 TAAGCCGCCCAAAAGAACTG 58.756 50.000 0.00 0.00 0.00 3.16
1877 2317 1.463553 AAGCCGCCCAAAAGAACTGG 61.464 55.000 0.00 0.00 0.00 4.00
1878 2318 2.650778 CCGCCCAAAAGAACTGGC 59.349 61.111 0.00 0.00 40.54 4.85
1879 2319 2.650778 CGCCCAAAAGAACTGGCC 59.349 61.111 0.00 0.00 40.87 5.36
1880 2320 2.931068 CGCCCAAAAGAACTGGCCC 61.931 63.158 0.00 0.00 40.87 5.80
1881 2321 1.836604 GCCCAAAAGAACTGGCCCA 60.837 57.895 0.00 0.00 37.94 5.36
1882 2322 1.194121 GCCCAAAAGAACTGGCCCAT 61.194 55.000 0.00 0.00 37.94 4.00
1883 2323 1.894978 GCCCAAAAGAACTGGCCCATA 60.895 52.381 0.00 0.00 37.94 2.74
1884 2324 2.102578 CCCAAAAGAACTGGCCCATAG 58.897 52.381 0.00 0.00 32.10 2.23
1885 2325 2.557452 CCCAAAAGAACTGGCCCATAGT 60.557 50.000 0.00 0.00 32.10 2.12
1886 2326 2.755103 CCAAAAGAACTGGCCCATAGTC 59.245 50.000 0.00 0.00 0.00 2.59
1887 2327 3.562176 CCAAAAGAACTGGCCCATAGTCT 60.562 47.826 0.00 0.00 0.00 3.24
1888 2328 4.324254 CCAAAAGAACTGGCCCATAGTCTA 60.324 45.833 0.00 0.00 0.00 2.59
1889 2329 4.762289 AAAGAACTGGCCCATAGTCTAG 57.238 45.455 0.00 0.00 0.00 2.43
1890 2330 3.406512 AGAACTGGCCCATAGTCTAGT 57.593 47.619 0.00 0.00 0.00 2.57
1891 2331 3.725634 AGAACTGGCCCATAGTCTAGTT 58.274 45.455 0.00 0.00 0.00 2.24
1892 2332 3.452627 AGAACTGGCCCATAGTCTAGTTG 59.547 47.826 0.00 0.00 0.00 3.16
1893 2333 1.486726 ACTGGCCCATAGTCTAGTTGC 59.513 52.381 0.00 0.00 0.00 4.17
1894 2334 0.837272 TGGCCCATAGTCTAGTTGCC 59.163 55.000 0.00 8.63 37.90 4.52
1895 2335 0.837272 GGCCCATAGTCTAGTTGCCA 59.163 55.000 10.09 0.00 37.36 4.92
1896 2336 1.211949 GGCCCATAGTCTAGTTGCCAA 59.788 52.381 10.09 0.00 37.36 4.52
1902 2342 6.459710 GCCCATAGTCTAGTTGCCAAAAATAC 60.460 42.308 0.00 0.00 0.00 1.89
1915 2355 4.023878 GCCAAAAATACAGTACCGTGTTCA 60.024 41.667 0.00 0.00 31.46 3.18
1924 2364 2.870411 AGTACCGTGTTCAAAAGAGCAC 59.130 45.455 2.87 2.87 33.77 4.40
1925 2365 1.021968 ACCGTGTTCAAAAGAGCACC 58.978 50.000 6.84 0.00 33.59 5.01
1945 2388 2.094338 CCTGGCTTGAAAAATGAGAGGC 60.094 50.000 0.00 0.00 0.00 4.70
1957 2400 3.939740 ATGAGAGGCCAGCTTTAATGA 57.060 42.857 5.01 0.00 0.00 2.57
1986 2429 4.462483 TGCATCCAACTTTATTCTGGAACC 59.538 41.667 0.00 0.00 42.41 3.62
1994 2437 7.714813 CCAACTTTATTCTGGAACCAAACAAAT 59.285 33.333 0.00 0.00 31.38 2.32
2024 2467 2.032030 ACACTTTTCACGATGCTTTCCG 60.032 45.455 0.00 0.00 0.00 4.30
2036 2479 0.593128 GCTTTCCGCTTCTGCTTTCA 59.407 50.000 0.00 0.00 36.97 2.69
2053 2496 5.060323 TGCTTTCAAAATAATTAAGCACGCG 59.940 36.000 3.53 3.53 44.30 6.01
2064 2507 1.667154 AAGCACGCGAGCCTGAGATA 61.667 55.000 24.84 0.00 34.23 1.98
2068 2511 1.069568 CACGCGAGCCTGAGATAGTAG 60.070 57.143 15.93 0.00 0.00 2.57
2072 2515 2.158058 GCGAGCCTGAGATAGTAGTACG 59.842 54.545 0.00 0.00 0.00 3.67
2119 2562 3.395639 CGAGTAACTAAGGTTTGGCACA 58.604 45.455 0.00 0.00 36.92 4.57
2151 2594 7.654022 AATTGTTCCAGTTTTGGTCTTAAGA 57.346 32.000 0.00 0.00 45.26 2.10
2155 2598 5.382664 TCCAGTTTTGGTCTTAAGAGGTT 57.617 39.130 5.12 0.00 45.26 3.50
2161 2604 4.513406 TTGGTCTTAAGAGGTTGGTTGT 57.487 40.909 5.12 0.00 0.00 3.32
2162 2605 3.815809 TGGTCTTAAGAGGTTGGTTGTG 58.184 45.455 5.12 0.00 0.00 3.33
2163 2606 3.201266 TGGTCTTAAGAGGTTGGTTGTGT 59.799 43.478 5.12 0.00 0.00 3.72
2164 2607 3.564225 GGTCTTAAGAGGTTGGTTGTGTG 59.436 47.826 5.12 0.00 0.00 3.82
2165 2608 3.564225 GTCTTAAGAGGTTGGTTGTGTGG 59.436 47.826 5.12 0.00 0.00 4.17
2166 2609 2.649531 TAAGAGGTTGGTTGTGTGGG 57.350 50.000 0.00 0.00 0.00 4.61
2167 2610 0.923358 AAGAGGTTGGTTGTGTGGGA 59.077 50.000 0.00 0.00 0.00 4.37
2168 2611 0.923358 AGAGGTTGGTTGTGTGGGAA 59.077 50.000 0.00 0.00 0.00 3.97
2169 2612 1.133792 AGAGGTTGGTTGTGTGGGAAG 60.134 52.381 0.00 0.00 0.00 3.46
2170 2613 0.923358 AGGTTGGTTGTGTGGGAAGA 59.077 50.000 0.00 0.00 0.00 2.87
2171 2614 1.499007 AGGTTGGTTGTGTGGGAAGAT 59.501 47.619 0.00 0.00 0.00 2.40
2172 2615 2.714250 AGGTTGGTTGTGTGGGAAGATA 59.286 45.455 0.00 0.00 0.00 1.98
2173 2616 3.139397 AGGTTGGTTGTGTGGGAAGATAA 59.861 43.478 0.00 0.00 0.00 1.75
2174 2617 3.254903 GGTTGGTTGTGTGGGAAGATAAC 59.745 47.826 0.00 0.00 0.00 1.89
2175 2618 4.142038 GTTGGTTGTGTGGGAAGATAACT 58.858 43.478 0.00 0.00 0.00 2.24
2176 2619 3.750371 TGGTTGTGTGGGAAGATAACTG 58.250 45.455 0.00 0.00 0.00 3.16
2177 2620 3.137544 TGGTTGTGTGGGAAGATAACTGT 59.862 43.478 0.00 0.00 0.00 3.55
2178 2621 4.348461 TGGTTGTGTGGGAAGATAACTGTA 59.652 41.667 0.00 0.00 0.00 2.74
2179 2622 4.694037 GGTTGTGTGGGAAGATAACTGTAC 59.306 45.833 0.00 0.00 0.00 2.90
2180 2623 4.546829 TGTGTGGGAAGATAACTGTACC 57.453 45.455 0.00 0.00 0.00 3.34
2181 2624 3.904965 TGTGTGGGAAGATAACTGTACCA 59.095 43.478 0.00 0.00 0.00 3.25
2182 2625 4.020573 TGTGTGGGAAGATAACTGTACCAG 60.021 45.833 0.00 0.00 37.52 4.00
2183 2626 3.055385 TGTGGGAAGATAACTGTACCAGC 60.055 47.826 0.00 0.00 34.37 4.85
2217 2683 1.499056 CATGGCACGCTTCAGACAC 59.501 57.895 0.00 0.00 0.00 3.67
2223 2689 0.778815 CACGCTTCAGACACGAGAAC 59.221 55.000 0.00 0.00 0.00 3.01
2228 2697 2.808543 GCTTCAGACACGAGAACCAAAT 59.191 45.455 0.00 0.00 0.00 2.32
2242 2711 4.889409 AGAACCAAATGAGCAGACAGAAAA 59.111 37.500 0.00 0.00 0.00 2.29
2277 2746 6.134055 TCCGTTAGAATTTCCTAGAGGATCA 58.866 40.000 0.00 0.00 44.98 2.92
2315 2784 4.956582 ACCAGTACTATTAGTTGGGGACT 58.043 43.478 15.71 5.30 42.55 3.85
2317 2786 5.789054 ACCAGTACTATTAGTTGGGGACTTT 59.211 40.000 15.71 0.00 39.86 2.66
2322 2791 5.567430 ACTATTAGTTGGGGACTTTGGAAC 58.433 41.667 0.00 0.00 39.86 3.62
2329 2798 2.023888 TGGGGACTTTGGAACCTTTTCA 60.024 45.455 0.00 0.00 32.80 2.69
2333 2802 4.588951 GGGACTTTGGAACCTTTTCATTCT 59.411 41.667 0.00 0.00 32.80 2.40
2334 2803 5.773176 GGGACTTTGGAACCTTTTCATTCTA 59.227 40.000 0.00 0.00 32.80 2.10
2427 2896 8.778358 CCATGAGCTATTTAGATTTTAGTGTCC 58.222 37.037 0.00 0.00 0.00 4.02
2458 2928 8.789881 TTTCTAAAAATTTGTGGTGTGTATCG 57.210 30.769 0.00 0.00 0.00 2.92
2491 2961 6.418819 CCAAAGAAATATCATGGATCGCAAAC 59.581 38.462 0.00 0.00 37.11 2.93
2497 2967 3.057969 TCATGGATCGCAAACAAGTCT 57.942 42.857 0.00 0.00 0.00 3.24
2501 2971 1.400242 GGATCGCAAACAAGTCTGCAC 60.400 52.381 0.00 0.00 38.52 4.57
2509 2979 4.558095 GCAAACAAGTCTGCACAGATTGAT 60.558 41.667 20.09 11.60 39.97 2.57
2528 2998 8.830201 GATTGATTAATCTCTGCAGTAGTCAT 57.170 34.615 14.67 0.00 39.66 3.06
2529 2999 8.604640 ATTGATTAATCTCTGCAGTAGTCATG 57.395 34.615 14.67 0.00 0.00 3.07
2531 3001 5.604758 TTAATCTCTGCAGTAGTCATGCT 57.395 39.130 14.67 0.00 44.17 3.79
2548 3018 6.058183 GTCATGCTAGGACAAACCATAGAAT 58.942 40.000 0.00 0.00 42.04 2.40
2575 3045 1.612950 AGAGTGCTATCGAGGATGCTG 59.387 52.381 0.00 0.00 0.00 4.41
2723 3193 5.380043 ACATGGAGAAATTCACACAGTTCT 58.620 37.500 0.00 0.00 33.07 3.01
2866 3337 4.536765 CCCCACACCAGCTCTATAATTTT 58.463 43.478 0.00 0.00 0.00 1.82
2936 3407 7.870509 TTGCATATAGGAATGATTGCCTATC 57.129 36.000 14.99 6.65 44.30 2.08
2937 3408 7.204243 TGCATATAGGAATGATTGCCTATCT 57.796 36.000 14.99 7.25 44.30 1.98
2938 3409 8.322905 TGCATATAGGAATGATTGCCTATCTA 57.677 34.615 14.99 4.92 44.30 1.98
2939 3410 8.771286 TGCATATAGGAATGATTGCCTATCTAA 58.229 33.333 14.99 4.43 44.30 2.10
2940 3411 9.050601 GCATATAGGAATGATTGCCTATCTAAC 57.949 37.037 14.99 5.52 44.30 2.34
2945 3416 8.174733 AGGAATGATTGCCTATCTAACATTTG 57.825 34.615 0.00 0.00 34.17 2.32
2946 3417 7.781693 AGGAATGATTGCCTATCTAACATTTGT 59.218 33.333 0.00 0.00 34.17 2.83
2947 3418 9.066892 GGAATGATTGCCTATCTAACATTTGTA 57.933 33.333 0.00 0.00 34.17 2.41
2950 3421 7.874940 TGATTGCCTATCTAACATTTGTATGC 58.125 34.615 0.00 0.00 33.24 3.14
2951 3422 7.501892 TGATTGCCTATCTAACATTTGTATGCA 59.498 33.333 0.00 0.00 33.24 3.96
2952 3423 7.822161 TTGCCTATCTAACATTTGTATGCAT 57.178 32.000 3.79 3.79 35.03 3.96
2953 3424 8.916628 TTGCCTATCTAACATTTGTATGCATA 57.083 30.769 1.16 1.16 35.03 3.14
2954 3425 9.519191 TTGCCTATCTAACATTTGTATGCATAT 57.481 29.630 10.16 0.00 35.03 1.78
3021 3492 6.283694 TGGCAAGATAATAGCTGAAGTACTG 58.716 40.000 0.00 0.00 0.00 2.74
3047 3518 6.095377 GCTATTCATTCTTTGACAGGTTTGG 58.905 40.000 0.00 0.00 32.84 3.28
3121 3592 9.342308 TCTTTCAACTAACTTTTGAGTGATCAT 57.658 29.630 0.00 0.00 34.50 2.45
3126 3597 7.440523 ACTAACTTTTGAGTGATCATGGTTC 57.559 36.000 0.00 0.00 0.00 3.62
3128 3599 5.954296 ACTTTTGAGTGATCATGGTTCAG 57.046 39.130 0.00 0.00 0.00 3.02
3132 3603 7.667219 ACTTTTGAGTGATCATGGTTCAGTAAT 59.333 33.333 0.00 0.00 0.00 1.89
3137 3608 9.685276 TGAGTGATCATGGTTCAGTAATTTTAT 57.315 29.630 0.00 0.00 0.00 1.40
3139 3610 9.125026 AGTGATCATGGTTCAGTAATTTTATCC 57.875 33.333 0.00 0.00 0.00 2.59
3141 3612 6.371809 TCATGGTTCAGTAATTTTATCCGC 57.628 37.500 0.00 0.00 0.00 5.54
3144 3615 4.093703 TGGTTCAGTAATTTTATCCGCGTG 59.906 41.667 4.92 0.00 0.00 5.34
3146 3617 2.610374 TCAGTAATTTTATCCGCGTGCC 59.390 45.455 4.92 0.00 0.00 5.01
3147 3618 2.612212 CAGTAATTTTATCCGCGTGCCT 59.388 45.455 4.92 0.00 0.00 4.75
3151 3622 0.035820 TTTTATCCGCGTGCCTTCCT 60.036 50.000 4.92 0.00 0.00 3.36
3154 3625 0.742990 TATCCGCGTGCCTTCCTTTG 60.743 55.000 4.92 0.00 0.00 2.77
3186 3657 0.546122 TGGTTGAGCAGTCTGTTGGT 59.454 50.000 0.93 0.00 0.00 3.67
3195 3666 2.094390 GCAGTCTGTTGGTATACCGTCA 60.094 50.000 17.13 15.91 39.43 4.35
3198 3669 3.830755 AGTCTGTTGGTATACCGTCAGTT 59.169 43.478 28.92 21.20 39.03 3.16
3219 3690 4.038271 TGCTGAGATTTTTCAGGTCCAT 57.962 40.909 5.30 0.00 43.80 3.41
3262 3733 1.463444 ACGAGGTGTGCGCTTATTTTC 59.537 47.619 9.73 0.00 0.00 2.29
3273 3744 6.701841 TGTGCGCTTATTTTCCTTAGAGATAG 59.298 38.462 9.73 0.00 0.00 2.08
3304 3775 5.948992 AACTCTATTTCCTTTCACAGTGC 57.051 39.130 0.00 0.00 0.00 4.40
3305 3776 5.234466 ACTCTATTTCCTTTCACAGTGCT 57.766 39.130 0.00 0.00 0.00 4.40
3308 3779 5.869579 TCTATTTCCTTTCACAGTGCTCTT 58.130 37.500 0.00 0.00 0.00 2.85
3309 3780 5.934625 TCTATTTCCTTTCACAGTGCTCTTC 59.065 40.000 0.00 0.00 0.00 2.87
3310 3781 3.845781 TTCCTTTCACAGTGCTCTTCT 57.154 42.857 0.00 0.00 0.00 2.85
3311 3782 3.845781 TCCTTTCACAGTGCTCTTCTT 57.154 42.857 0.00 0.00 0.00 2.52
3318 3825 4.626042 TCACAGTGCTCTTCTTTTCTCTC 58.374 43.478 0.00 0.00 0.00 3.20
3319 3826 3.745458 CACAGTGCTCTTCTTTTCTCTCC 59.255 47.826 0.00 0.00 0.00 3.71
3329 3836 7.257790 TCTTCTTTTCTCTCCCATGATGTAA 57.742 36.000 0.00 0.00 0.00 2.41
3338 3845 5.210430 TCTCCCATGATGTAATTTGCCATT 58.790 37.500 0.00 0.00 0.00 3.16
3339 3846 6.372104 TCTCCCATGATGTAATTTGCCATTA 58.628 36.000 0.00 0.00 0.00 1.90
3347 3854 6.265196 TGATGTAATTTGCCATTATCCACCTC 59.735 38.462 0.00 0.00 0.00 3.85
3351 3858 4.799564 TTTGCCATTATCCACCTCAAAC 57.200 40.909 0.00 0.00 0.00 2.93
3352 3859 2.733956 TGCCATTATCCACCTCAAACC 58.266 47.619 0.00 0.00 0.00 3.27
3354 3861 2.689983 GCCATTATCCACCTCAAACCTG 59.310 50.000 0.00 0.00 0.00 4.00
3368 3875 4.018490 TCAAACCTGCATGCTGTGATATT 58.982 39.130 20.33 4.71 0.00 1.28
3369 3876 5.192176 TCAAACCTGCATGCTGTGATATTA 58.808 37.500 20.33 0.00 0.00 0.98
3370 3877 5.297527 TCAAACCTGCATGCTGTGATATTAG 59.702 40.000 20.33 4.01 0.00 1.73
3371 3878 3.748083 ACCTGCATGCTGTGATATTAGG 58.252 45.455 20.33 15.59 0.00 2.69
3372 3879 3.392285 ACCTGCATGCTGTGATATTAGGA 59.608 43.478 20.33 0.00 0.00 2.94
3373 3880 4.001652 CCTGCATGCTGTGATATTAGGAG 58.998 47.826 20.33 2.46 0.00 3.69
3374 3881 4.504514 CCTGCATGCTGTGATATTAGGAGT 60.505 45.833 20.33 0.00 0.00 3.85
3375 3882 4.383173 TGCATGCTGTGATATTAGGAGTG 58.617 43.478 20.33 0.00 0.00 3.51
3376 3883 3.188048 GCATGCTGTGATATTAGGAGTGC 59.812 47.826 11.37 0.00 0.00 4.40
3377 3884 4.639334 CATGCTGTGATATTAGGAGTGCT 58.361 43.478 0.00 0.00 0.00 4.40
3407 3914 7.493971 GTGGTCTACAGTACTAATCTCGTCTAA 59.506 40.741 0.00 0.00 0.00 2.10
3630 4139 7.066163 TGTGTGAAATTGCAGGAGTTATATGAG 59.934 37.037 0.00 0.00 0.00 2.90
3646 4155 9.084533 AGTTATATGAGGAAAGGACTCACTATC 57.915 37.037 0.00 0.00 46.67 2.08
3673 4182 1.959282 GATGTTCCATTGGATGCCCTC 59.041 52.381 6.15 0.00 0.00 4.30
3801 4310 1.127213 GCAATTTGAGTTTGGCATGCG 59.873 47.619 12.44 0.00 0.00 4.73
3818 4327 2.554142 TGCGGACAGAGCTAATGATTG 58.446 47.619 5.45 0.00 35.28 2.67
3830 4339 5.469479 AGCTAATGATTGTTTGTTTTCCCG 58.531 37.500 0.00 0.00 0.00 5.14
3904 4413 1.270305 GCTAATGCTGATGCCCGAGTA 60.270 52.381 0.00 0.00 38.71 2.59
4060 4569 5.682943 TTACACCATTGCTGACTGTAAAC 57.317 39.130 0.00 0.00 29.50 2.01
4065 4574 4.584325 ACCATTGCTGACTGTAAACACAAT 59.416 37.500 0.00 0.00 0.00 2.71
4364 4873 7.831193 ACATACCTTTGCATAAGACATTCTTCT 59.169 33.333 9.37 0.00 37.89 2.85
4402 4913 4.762289 ATGACAGAGGATAACTTGGGTC 57.238 45.455 0.00 0.00 0.00 4.46
4482 4993 7.970061 TGTCTTTATCTTGCTGCAAATTGATAC 59.030 33.333 16.74 10.51 0.00 2.24
4510 5022 9.111519 TGGATTTGGGAGTAAATAGCTATATCA 57.888 33.333 6.68 0.00 30.78 2.15
4600 5112 3.434637 GCAAAGTGCAGTTCTCGAAAAA 58.565 40.909 7.36 0.00 44.26 1.94
4994 5515 0.245539 CTGGTGAAAGCTGCATTGGG 59.754 55.000 1.02 0.00 33.76 4.12
5063 5584 3.577667 ACACGCCACATGAATTTTGATG 58.422 40.909 0.00 0.00 0.00 3.07
5234 5755 2.064014 GAGCCTGCAAAACTTGAATGC 58.936 47.619 0.00 0.00 40.45 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 3.091545 CTGCCTCTTCCCAGCATAAAAA 58.908 45.455 0.00 0.00 35.64 1.94
10 11 2.726821 CTGCCTCTTCCCAGCATAAAA 58.273 47.619 0.00 0.00 35.64 1.52
11 12 2.425143 CTGCCTCTTCCCAGCATAAA 57.575 50.000 0.00 0.00 35.64 1.40
17 18 2.725221 AATAAGCTGCCTCTTCCCAG 57.275 50.000 0.00 0.00 0.00 4.45
18 19 3.456380 AAAATAAGCTGCCTCTTCCCA 57.544 42.857 0.00 0.00 0.00 4.37
36 37 7.718525 ACTTCTTTTGGTCGGCTTATTAAAAA 58.281 30.769 0.00 0.00 0.00 1.94
37 38 7.279750 ACTTCTTTTGGTCGGCTTATTAAAA 57.720 32.000 0.00 0.00 0.00 1.52
38 39 6.887626 ACTTCTTTTGGTCGGCTTATTAAA 57.112 33.333 0.00 0.00 0.00 1.52
39 40 6.093082 GCTACTTCTTTTGGTCGGCTTATTAA 59.907 38.462 0.00 0.00 0.00 1.40
40 41 5.583457 GCTACTTCTTTTGGTCGGCTTATTA 59.417 40.000 0.00 0.00 0.00 0.98
41 42 4.395231 GCTACTTCTTTTGGTCGGCTTATT 59.605 41.667 0.00 0.00 0.00 1.40
42 43 3.939592 GCTACTTCTTTTGGTCGGCTTAT 59.060 43.478 0.00 0.00 0.00 1.73
43 44 3.332034 GCTACTTCTTTTGGTCGGCTTA 58.668 45.455 0.00 0.00 0.00 3.09
44 45 2.152016 GCTACTTCTTTTGGTCGGCTT 58.848 47.619 0.00 0.00 0.00 4.35
45 46 1.610886 GGCTACTTCTTTTGGTCGGCT 60.611 52.381 0.00 0.00 0.00 5.52
46 47 0.803117 GGCTACTTCTTTTGGTCGGC 59.197 55.000 0.00 0.00 0.00 5.54
47 48 1.450025 GGGCTACTTCTTTTGGTCGG 58.550 55.000 0.00 0.00 0.00 4.79
48 49 1.076332 CGGGCTACTTCTTTTGGTCG 58.924 55.000 0.00 0.00 0.00 4.79
49 50 2.180432 ACGGGCTACTTCTTTTGGTC 57.820 50.000 0.00 0.00 0.00 4.02
50 51 3.775261 TTACGGGCTACTTCTTTTGGT 57.225 42.857 0.00 0.00 0.00 3.67
51 52 3.626217 GGATTACGGGCTACTTCTTTTGG 59.374 47.826 0.00 0.00 0.00 3.28
52 53 3.308866 CGGATTACGGGCTACTTCTTTTG 59.691 47.826 0.00 0.00 39.42 2.44
53 54 3.528532 CGGATTACGGGCTACTTCTTTT 58.471 45.455 0.00 0.00 39.42 2.27
54 55 3.175109 CGGATTACGGGCTACTTCTTT 57.825 47.619 0.00 0.00 39.42 2.52
55 56 2.884894 CGGATTACGGGCTACTTCTT 57.115 50.000 0.00 0.00 39.42 2.52
81 82 1.142262 CCGGGGGTTATTTTCGGAGAT 59.858 52.381 0.00 0.00 42.94 2.75
82 83 0.542805 CCGGGGGTTATTTTCGGAGA 59.457 55.000 0.00 0.00 42.94 3.71
83 84 0.464916 CCCGGGGGTTATTTTCGGAG 60.465 60.000 14.71 0.00 42.94 4.63
84 85 1.608696 CCCGGGGGTTATTTTCGGA 59.391 57.895 14.71 0.00 42.94 4.55
85 86 2.122797 GCCCGGGGGTTATTTTCGG 61.123 63.158 25.28 0.00 40.32 4.30
100 101 0.962855 GTTTCAGCTTGGAGGAGCCC 60.963 60.000 0.00 0.00 43.74 5.19
321 328 2.679996 AAGCCAAATCCGGTGGGC 60.680 61.111 16.81 16.81 46.77 5.36
324 331 1.535204 AAGCCAAGCCAAATCCGGTG 61.535 55.000 0.00 0.00 0.00 4.94
326 333 0.321346 AAAAGCCAAGCCAAATCCGG 59.679 50.000 0.00 0.00 0.00 5.14
327 334 1.672737 GGAAAAGCCAAGCCAAATCCG 60.673 52.381 0.00 0.00 36.34 4.18
328 335 1.339055 GGGAAAAGCCAAGCCAAATCC 60.339 52.381 0.00 0.00 38.95 3.01
329 336 1.339055 GGGGAAAAGCCAAGCCAAATC 60.339 52.381 0.00 0.00 38.95 2.17
330 337 0.692476 GGGGAAAAGCCAAGCCAAAT 59.308 50.000 0.00 0.00 38.95 2.32
331 338 1.753368 CGGGGAAAAGCCAAGCCAAA 61.753 55.000 0.00 0.00 38.95 3.28
332 339 2.206536 CGGGGAAAAGCCAAGCCAA 61.207 57.895 0.00 0.00 38.95 4.52
334 341 3.381983 CCGGGGAAAAGCCAAGCC 61.382 66.667 0.00 0.00 38.95 4.35
336 343 1.678970 CCTCCGGGGAAAAGCCAAG 60.679 63.158 0.37 0.00 38.95 3.61
337 344 2.438795 CCTCCGGGGAAAAGCCAA 59.561 61.111 0.37 0.00 38.95 4.52
341 348 1.244816 GTTTCACCTCCGGGGAAAAG 58.755 55.000 11.58 0.00 35.31 2.27
481 566 1.918957 AGCCAAGCAAGACCCTAATCT 59.081 47.619 0.00 0.00 0.00 2.40
486 571 1.682257 GAGAGCCAAGCAAGACCCT 59.318 57.895 0.00 0.00 0.00 4.34
579 674 7.986320 AGTATCAGATTATAATCAGATGCAGCC 59.014 37.037 31.44 19.28 42.34 4.85
596 691 5.143369 TCCTGTGCTGTCATAGTATCAGAT 58.857 41.667 3.59 0.00 30.44 2.90
597 692 4.536765 TCCTGTGCTGTCATAGTATCAGA 58.463 43.478 3.59 0.00 30.44 3.27
604 699 3.930336 TCAGTTTCCTGTGCTGTCATAG 58.070 45.455 0.00 0.00 39.82 2.23
656 981 1.079057 GAGAAGCCCGGGACTGTTC 60.079 63.158 29.31 19.86 0.00 3.18
699 1040 2.203294 GTGGGTGGTGGTGGTGTC 60.203 66.667 0.00 0.00 0.00 3.67
700 1041 3.816090 GGTGGGTGGTGGTGGTGT 61.816 66.667 0.00 0.00 0.00 4.16
779 1122 2.028930 AGGAGACGCAAGAGGTAAAGTG 60.029 50.000 0.00 0.00 43.62 3.16
780 1123 2.231721 GAGGAGACGCAAGAGGTAAAGT 59.768 50.000 0.00 0.00 43.62 2.66
782 1125 2.492484 GAGAGGAGACGCAAGAGGTAAA 59.508 50.000 0.00 0.00 43.62 2.01
783 1126 2.093106 GAGAGGAGACGCAAGAGGTAA 58.907 52.381 0.00 0.00 43.62 2.85
785 1128 1.309499 CGAGAGGAGACGCAAGAGGT 61.309 60.000 0.00 0.00 43.62 3.85
786 1129 1.309499 ACGAGAGGAGACGCAAGAGG 61.309 60.000 0.00 0.00 43.62 3.69
787 1130 0.098025 GACGAGAGGAGACGCAAGAG 59.902 60.000 0.00 0.00 43.62 2.85
788 1131 1.306642 GGACGAGAGGAGACGCAAGA 61.307 60.000 0.00 0.00 43.62 3.02
791 1134 3.125573 CGGACGAGAGGAGACGCA 61.126 66.667 0.00 0.00 0.00 5.24
792 1135 4.539881 GCGGACGAGAGGAGACGC 62.540 72.222 0.00 0.00 40.19 5.19
793 1136 2.312398 GAAGCGGACGAGAGGAGACG 62.312 65.000 0.00 0.00 0.00 4.18
794 1137 1.430228 GAAGCGGACGAGAGGAGAC 59.570 63.158 0.00 0.00 0.00 3.36
796 1139 2.312398 GACGAAGCGGACGAGAGGAG 62.312 65.000 7.16 0.00 34.70 3.69
797 1140 2.359602 ACGAAGCGGACGAGAGGA 60.360 61.111 7.16 0.00 34.70 3.71
798 1141 2.100603 GACGAAGCGGACGAGAGG 59.899 66.667 7.16 0.00 34.70 3.69
799 1142 1.061253 GAGACGAAGCGGACGAGAG 59.939 63.158 7.16 0.00 34.70 3.20
800 1143 0.954449 AAGAGACGAAGCGGACGAGA 60.954 55.000 7.16 0.00 34.70 4.04
801 1144 0.521659 GAAGAGACGAAGCGGACGAG 60.522 60.000 7.16 0.00 34.70 4.18
802 1145 0.954449 AGAAGAGACGAAGCGGACGA 60.954 55.000 7.16 0.00 34.70 4.20
803 1146 0.109689 AAGAAGAGACGAAGCGGACG 60.110 55.000 0.00 0.00 0.00 4.79
804 1147 1.619983 GAAGAAGAGACGAAGCGGAC 58.380 55.000 0.00 0.00 0.00 4.79
805 1148 0.526662 GGAAGAAGAGACGAAGCGGA 59.473 55.000 0.00 0.00 0.00 5.54
806 1149 0.458716 GGGAAGAAGAGACGAAGCGG 60.459 60.000 0.00 0.00 0.00 5.52
807 1150 0.528470 AGGGAAGAAGAGACGAAGCG 59.472 55.000 0.00 0.00 0.00 4.68
808 1151 1.134936 GGAGGGAAGAAGAGACGAAGC 60.135 57.143 0.00 0.00 0.00 3.86
809 1152 1.133407 CGGAGGGAAGAAGAGACGAAG 59.867 57.143 0.00 0.00 0.00 3.79
810 1153 1.174783 CGGAGGGAAGAAGAGACGAA 58.825 55.000 0.00 0.00 0.00 3.85
811 1154 1.313812 GCGGAGGGAAGAAGAGACGA 61.314 60.000 0.00 0.00 0.00 4.20
812 1155 1.139947 GCGGAGGGAAGAAGAGACG 59.860 63.158 0.00 0.00 0.00 4.18
861 1204 3.799755 GAACGGTGGTGGATGCGC 61.800 66.667 0.00 0.00 0.00 6.09
863 1206 2.750237 GGGAACGGTGGTGGATGC 60.750 66.667 0.00 0.00 0.00 3.91
943 1286 3.628032 GCAGGAAGTTATTAACAGGAGCC 59.372 47.826 9.15 3.11 0.00 4.70
949 1292 4.250464 CGAGTGGCAGGAAGTTATTAACA 58.750 43.478 9.15 0.00 0.00 2.41
1089 1432 3.729965 CTGATCAAGCCTCGCCGCT 62.730 63.158 0.00 0.00 42.22 5.52
1153 1496 2.143419 GGATGGGATCGGTGCTCCT 61.143 63.158 2.85 0.00 33.05 3.69
1267 1610 2.125952 GTTGGCGGCAGAAATGGC 60.126 61.111 12.87 0.00 0.00 4.40
1269 1612 1.135315 CGAGTTGGCGGCAGAAATG 59.865 57.895 12.87 0.00 0.00 2.32
1293 1636 9.273016 TGTCCTAGCACTAATATTAATCTTTGC 57.727 33.333 0.00 0.00 0.00 3.68
1316 1660 4.631813 GGCAATATCATCTTATCCGGTGTC 59.368 45.833 0.00 0.00 0.00 3.67
1351 1695 2.869233 ACAAAGCGTTGCAATGAGTT 57.131 40.000 22.81 11.38 38.39 3.01
1441 1802 7.449704 AGAAGAAACAGAAAAATGCTACTCCAT 59.550 33.333 0.00 0.00 0.00 3.41
1442 1803 6.772716 AGAAGAAACAGAAAAATGCTACTCCA 59.227 34.615 0.00 0.00 0.00 3.86
1443 1804 7.208225 AGAAGAAACAGAAAAATGCTACTCC 57.792 36.000 0.00 0.00 0.00 3.85
1475 1836 9.173021 CATGGTACCATATTTTCTTGACAACTA 57.827 33.333 26.91 0.00 34.91 2.24
1481 1842 5.065859 CGCACATGGTACCATATTTTCTTGA 59.934 40.000 26.91 0.00 34.91 3.02
1485 1846 5.493133 TTCGCACATGGTACCATATTTTC 57.507 39.130 26.91 12.99 34.91 2.29
1496 1857 2.401583 TATGCTCTTTCGCACATGGT 57.598 45.000 0.00 0.00 43.61 3.55
1503 1864 1.942657 TCAAGGCATATGCTCTTTCGC 59.057 47.619 26.12 8.58 41.70 4.70
1568 2007 6.695429 TGTGTTATTTGCCATCAAAAGCATA 58.305 32.000 0.00 0.00 44.44 3.14
1584 2023 8.791327 TGATGACTAATCACACATGTGTTATT 57.209 30.769 30.80 30.80 45.76 1.40
1596 2035 8.116753 CAGGTCGTTAATTTGATGACTAATCAC 58.883 37.037 11.84 0.00 45.17 3.06
1603 2042 7.112984 GTGTTTTCAGGTCGTTAATTTGATGAC 59.887 37.037 5.24 5.24 33.32 3.06
1612 2051 2.030701 GCGTGTGTTTTCAGGTCGTTAA 59.969 45.455 0.00 0.00 0.00 2.01
1623 2063 2.606795 GCATATGGTGTGCGTGTGTTTT 60.607 45.455 4.56 0.00 32.29 2.43
1651 2091 1.076923 GCTACTCCCTCCTGACCGA 60.077 63.158 0.00 0.00 0.00 4.69
1654 2094 3.274288 CAAAATGCTACTCCCTCCTGAC 58.726 50.000 0.00 0.00 0.00 3.51
1657 2097 4.082125 CAAACAAAATGCTACTCCCTCCT 58.918 43.478 0.00 0.00 0.00 3.69
1716 2156 1.685180 GGGAGGAGGCGGCTTATTTTT 60.685 52.381 14.76 0.00 0.00 1.94
1717 2157 0.106669 GGGAGGAGGCGGCTTATTTT 60.107 55.000 14.76 0.00 0.00 1.82
1718 2158 1.279025 TGGGAGGAGGCGGCTTATTT 61.279 55.000 14.76 0.00 0.00 1.40
1719 2159 1.692749 TGGGAGGAGGCGGCTTATT 60.693 57.895 14.76 1.09 0.00 1.40
1720 2160 2.040884 TGGGAGGAGGCGGCTTAT 60.041 61.111 14.76 4.47 0.00 1.73
1721 2161 2.764128 CTGGGAGGAGGCGGCTTA 60.764 66.667 14.76 0.00 0.00 3.09
1725 2165 3.273788 AAAAGCTGGGAGGAGGCGG 62.274 63.158 0.00 0.00 0.00 6.13
1726 2166 1.746991 GAAAAGCTGGGAGGAGGCG 60.747 63.158 0.00 0.00 0.00 5.52
1727 2167 1.379176 GGAAAAGCTGGGAGGAGGC 60.379 63.158 0.00 0.00 0.00 4.70
1728 2168 1.304617 GGGAAAAGCTGGGAGGAGG 59.695 63.158 0.00 0.00 0.00 4.30
1729 2169 0.627986 ATGGGAAAAGCTGGGAGGAG 59.372 55.000 0.00 0.00 0.00 3.69
1730 2170 1.979809 TATGGGAAAAGCTGGGAGGA 58.020 50.000 0.00 0.00 0.00 3.71
1731 2171 2.659428 CTTATGGGAAAAGCTGGGAGG 58.341 52.381 0.00 0.00 0.00 4.30
1732 2172 2.027385 GCTTATGGGAAAAGCTGGGAG 58.973 52.381 0.00 0.00 44.75 4.30
1733 2173 1.341976 GGCTTATGGGAAAAGCTGGGA 60.342 52.381 7.65 0.00 46.81 4.37
1734 2174 1.114627 GGCTTATGGGAAAAGCTGGG 58.885 55.000 7.65 0.00 46.81 4.45
1737 2177 1.282157 AGACGGCTTATGGGAAAAGCT 59.718 47.619 7.65 0.00 46.81 3.74
1738 2178 1.671328 GAGACGGCTTATGGGAAAAGC 59.329 52.381 0.00 0.00 46.90 3.51
1739 2179 2.289565 GGAGACGGCTTATGGGAAAAG 58.710 52.381 0.00 0.00 0.00 2.27
1740 2180 2.413310 GGAGACGGCTTATGGGAAAA 57.587 50.000 0.00 0.00 0.00 2.29
1754 2194 1.668419 CCCCAATGAATGACGGAGAC 58.332 55.000 0.00 0.00 0.00 3.36
1755 2195 0.107214 GCCCCAATGAATGACGGAGA 60.107 55.000 0.00 0.00 0.00 3.71
1756 2196 0.107017 AGCCCCAATGAATGACGGAG 60.107 55.000 0.00 0.00 0.00 4.63
1757 2197 0.331278 AAGCCCCAATGAATGACGGA 59.669 50.000 0.00 0.00 0.00 4.69
1758 2198 1.185315 AAAGCCCCAATGAATGACGG 58.815 50.000 0.00 0.00 0.00 4.79
1759 2199 2.230992 TCAAAAGCCCCAATGAATGACG 59.769 45.455 0.00 0.00 0.00 4.35
1760 2200 3.959535 TCAAAAGCCCCAATGAATGAC 57.040 42.857 0.00 0.00 0.00 3.06
1761 2201 5.721000 ACTATTCAAAAGCCCCAATGAATGA 59.279 36.000 9.45 0.00 41.30 2.57
1762 2202 5.981174 ACTATTCAAAAGCCCCAATGAATG 58.019 37.500 9.45 3.77 41.30 2.67
1763 2203 6.625532 AACTATTCAAAAGCCCCAATGAAT 57.374 33.333 5.34 5.34 43.08 2.57
1764 2204 6.432403 AAACTATTCAAAAGCCCCAATGAA 57.568 33.333 0.00 0.00 36.35 2.57
1765 2205 7.234577 AGTTAAACTATTCAAAAGCCCCAATGA 59.765 33.333 0.00 0.00 0.00 2.57
1766 2206 7.386059 AGTTAAACTATTCAAAAGCCCCAATG 58.614 34.615 0.00 0.00 0.00 2.82
1767 2207 7.553504 AGTTAAACTATTCAAAAGCCCCAAT 57.446 32.000 0.00 0.00 0.00 3.16
1768 2208 6.987403 AGTTAAACTATTCAAAAGCCCCAA 57.013 33.333 0.00 0.00 0.00 4.12
1769 2209 8.658840 ATTAGTTAAACTATTCAAAAGCCCCA 57.341 30.769 0.00 0.00 29.64 4.96
1770 2210 9.938280 AAATTAGTTAAACTATTCAAAAGCCCC 57.062 29.630 0.00 0.00 29.64 5.80
1810 2250 7.589574 GCTTAAAAATAAGCCGATCCAAAAA 57.410 32.000 8.96 0.00 44.85 1.94
1822 2262 7.658167 GCTACCTCTCCCTAGCTTAAAAATAAG 59.342 40.741 0.00 0.00 33.81 1.73
1823 2263 7.347485 AGCTACCTCTCCCTAGCTTAAAAATAA 59.653 37.037 0.00 0.00 42.56 1.40
1824 2264 6.844917 AGCTACCTCTCCCTAGCTTAAAAATA 59.155 38.462 0.00 0.00 42.56 1.40
1825 2265 5.668080 AGCTACCTCTCCCTAGCTTAAAAAT 59.332 40.000 0.00 0.00 42.56 1.82
1826 2266 5.030820 AGCTACCTCTCCCTAGCTTAAAAA 58.969 41.667 0.00 0.00 42.56 1.94
1827 2267 4.621769 AGCTACCTCTCCCTAGCTTAAAA 58.378 43.478 0.00 0.00 42.56 1.52
1828 2268 4.267341 AGCTACCTCTCCCTAGCTTAAA 57.733 45.455 0.00 0.00 42.56 1.52
1829 2269 3.975479 AGCTACCTCTCCCTAGCTTAA 57.025 47.619 0.00 0.00 42.56 1.85
1831 2271 2.858787 AAGCTACCTCTCCCTAGCTT 57.141 50.000 6.17 6.17 46.79 3.74
1832 2272 1.289530 ACAAGCTACCTCTCCCTAGCT 59.710 52.381 0.00 0.00 46.28 3.32
1833 2273 1.783071 ACAAGCTACCTCTCCCTAGC 58.217 55.000 0.00 0.00 36.40 3.42
1834 2274 4.828072 AAAACAAGCTACCTCTCCCTAG 57.172 45.455 0.00 0.00 0.00 3.02
1853 2293 3.133183 AGTTCTTTTGGGCGGCTTAAAAA 59.867 39.130 19.13 16.49 0.00 1.94
1854 2294 2.696187 AGTTCTTTTGGGCGGCTTAAAA 59.304 40.909 9.56 15.26 0.00 1.52
1855 2295 2.035321 CAGTTCTTTTGGGCGGCTTAAA 59.965 45.455 9.56 8.36 0.00 1.52
1856 2296 1.611491 CAGTTCTTTTGGGCGGCTTAA 59.389 47.619 9.56 1.63 0.00 1.85
1857 2297 1.243902 CAGTTCTTTTGGGCGGCTTA 58.756 50.000 9.56 0.00 0.00 3.09
1858 2298 1.463553 CCAGTTCTTTTGGGCGGCTT 61.464 55.000 9.56 0.00 31.87 4.35
1859 2299 1.903404 CCAGTTCTTTTGGGCGGCT 60.903 57.895 9.56 0.00 31.87 5.52
1860 2300 2.650778 CCAGTTCTTTTGGGCGGC 59.349 61.111 0.00 0.00 31.87 6.53
1861 2301 2.650778 GCCAGTTCTTTTGGGCGG 59.349 61.111 0.00 0.00 36.58 6.13
1864 2304 2.102578 CTATGGGCCAGTTCTTTTGGG 58.897 52.381 13.78 0.00 36.19 4.12
1865 2305 2.755103 GACTATGGGCCAGTTCTTTTGG 59.245 50.000 13.78 0.00 38.78 3.28
1866 2306 3.690460 AGACTATGGGCCAGTTCTTTTG 58.310 45.455 13.78 0.00 0.00 2.44
1867 2307 4.536489 ACTAGACTATGGGCCAGTTCTTTT 59.464 41.667 13.78 0.00 0.00 2.27
1868 2308 4.104831 ACTAGACTATGGGCCAGTTCTTT 58.895 43.478 13.78 0.00 0.00 2.52
1869 2309 3.725634 ACTAGACTATGGGCCAGTTCTT 58.274 45.455 13.78 0.00 0.00 2.52
1870 2310 3.406512 ACTAGACTATGGGCCAGTTCT 57.593 47.619 13.78 15.25 0.00 3.01
1871 2311 3.798202 CAACTAGACTATGGGCCAGTTC 58.202 50.000 13.78 8.07 0.00 3.01
1872 2312 2.092914 GCAACTAGACTATGGGCCAGTT 60.093 50.000 13.78 5.75 0.00 3.16
1873 2313 1.486726 GCAACTAGACTATGGGCCAGT 59.513 52.381 13.78 4.98 0.00 4.00
1874 2314 1.202698 GGCAACTAGACTATGGGCCAG 60.203 57.143 13.78 0.82 39.66 4.85
1875 2315 0.837272 GGCAACTAGACTATGGGCCA 59.163 55.000 9.61 9.61 39.66 5.36
1876 2316 0.837272 TGGCAACTAGACTATGGGCC 59.163 55.000 0.00 0.00 40.29 5.80
1877 2317 2.710096 TTGGCAACTAGACTATGGGC 57.290 50.000 0.00 0.00 37.61 5.36
1878 2318 6.601613 TGTATTTTTGGCAACTAGACTATGGG 59.398 38.462 0.00 0.00 37.61 4.00
1879 2319 7.336931 ACTGTATTTTTGGCAACTAGACTATGG 59.663 37.037 0.00 0.00 37.61 2.74
1880 2320 8.268850 ACTGTATTTTTGGCAACTAGACTATG 57.731 34.615 0.00 0.00 37.61 2.23
1881 2321 9.379791 GTACTGTATTTTTGGCAACTAGACTAT 57.620 33.333 0.00 0.00 37.61 2.12
1882 2322 7.820872 GGTACTGTATTTTTGGCAACTAGACTA 59.179 37.037 0.00 0.00 37.61 2.59
1883 2323 6.653740 GGTACTGTATTTTTGGCAACTAGACT 59.346 38.462 0.00 0.00 37.61 3.24
1884 2324 6.401796 CGGTACTGTATTTTTGGCAACTAGAC 60.402 42.308 0.00 0.00 37.61 2.59
1885 2325 5.640357 CGGTACTGTATTTTTGGCAACTAGA 59.360 40.000 0.00 0.00 37.61 2.43
1886 2326 5.410439 ACGGTACTGTATTTTTGGCAACTAG 59.590 40.000 5.26 0.00 37.61 2.57
1887 2327 5.179742 CACGGTACTGTATTTTTGGCAACTA 59.820 40.000 7.11 0.00 37.61 2.24
1888 2328 4.023536 CACGGTACTGTATTTTTGGCAACT 60.024 41.667 7.11 0.00 37.61 3.16
1889 2329 4.223659 CACGGTACTGTATTTTTGGCAAC 58.776 43.478 7.11 0.00 0.00 4.17
1890 2330 3.884091 ACACGGTACTGTATTTTTGGCAA 59.116 39.130 7.11 0.00 0.00 4.52
1891 2331 3.478509 ACACGGTACTGTATTTTTGGCA 58.521 40.909 7.11 0.00 0.00 4.92
1892 2332 4.023878 TGAACACGGTACTGTATTTTTGGC 60.024 41.667 7.11 0.00 0.00 4.52
1893 2333 5.676532 TGAACACGGTACTGTATTTTTGG 57.323 39.130 7.11 0.00 0.00 3.28
1894 2334 7.911205 TCTTTTGAACACGGTACTGTATTTTTG 59.089 33.333 7.11 0.00 0.00 2.44
1895 2335 7.987649 TCTTTTGAACACGGTACTGTATTTTT 58.012 30.769 7.11 0.00 0.00 1.94
1896 2336 7.556733 TCTTTTGAACACGGTACTGTATTTT 57.443 32.000 7.11 1.10 0.00 1.82
1902 2342 2.869801 TGCTCTTTTGAACACGGTACTG 59.130 45.455 0.00 0.00 0.00 2.74
1924 2364 2.094338 GCCTCTCATTTTTCAAGCCAGG 60.094 50.000 0.00 0.00 0.00 4.45
1925 2365 2.094338 GGCCTCTCATTTTTCAAGCCAG 60.094 50.000 0.00 0.00 39.01 4.85
1945 2388 5.292589 GGATGCATTTTGTCATTAAAGCTGG 59.707 40.000 0.00 0.00 0.00 4.85
1957 2400 6.875195 CCAGAATAAAGTTGGATGCATTTTGT 59.125 34.615 0.00 0.00 33.76 2.83
1994 2437 7.544622 AGCATCGTGAAAAGTGTATTACTCTA 58.455 34.615 0.00 0.00 39.18 2.43
2024 2467 8.243289 TGCTTAATTATTTTGAAAGCAGAAGC 57.757 30.769 8.31 2.83 45.47 3.86
2036 2479 3.377172 AGGCTCGCGTGCTTAATTATTTT 59.623 39.130 29.41 3.54 0.00 1.82
2053 2496 5.754543 AAACGTACTACTATCTCAGGCTC 57.245 43.478 0.00 0.00 0.00 4.70
2119 2562 6.048509 CCAAAACTGGAACAATTTTACAGCT 58.951 36.000 10.66 0.00 46.28 4.24
2151 2594 0.923358 TCTTCCCACACAACCAACCT 59.077 50.000 0.00 0.00 0.00 3.50
2155 2598 3.137544 ACAGTTATCTTCCCACACAACCA 59.862 43.478 0.00 0.00 0.00 3.67
2180 2623 0.877213 GCAACAAAGGCCAACAGCTG 60.877 55.000 13.48 13.48 43.05 4.24
2181 2624 1.329171 TGCAACAAAGGCCAACAGCT 61.329 50.000 5.01 0.00 43.05 4.24
2182 2625 0.249996 ATGCAACAAAGGCCAACAGC 60.250 50.000 5.01 1.22 42.60 4.40
2183 2626 1.504359 CATGCAACAAAGGCCAACAG 58.496 50.000 5.01 0.00 0.00 3.16
2217 2683 2.414481 CTGTCTGCTCATTTGGTTCTCG 59.586 50.000 0.00 0.00 0.00 4.04
2223 2689 6.151648 TCCTAATTTTCTGTCTGCTCATTTGG 59.848 38.462 0.00 0.00 0.00 3.28
2228 2697 4.021456 TCGTCCTAATTTTCTGTCTGCTCA 60.021 41.667 0.00 0.00 0.00 4.26
2294 2763 5.952347 AAGTCCCCAACTAATAGTACTGG 57.048 43.478 5.39 4.53 37.17 4.00
2298 2767 6.296605 GGTTCCAAAGTCCCCAACTAATAGTA 60.297 42.308 0.00 0.00 37.17 1.82
2300 2769 4.948004 GGTTCCAAAGTCCCCAACTAATAG 59.052 45.833 0.00 0.00 37.17 1.73
2315 2784 7.505585 ACTGATGTAGAATGAAAAGGTTCCAAA 59.494 33.333 0.00 0.00 32.28 3.28
2317 2786 6.542821 ACTGATGTAGAATGAAAAGGTTCCA 58.457 36.000 0.00 0.00 32.28 3.53
2322 2791 5.939883 TGGTGACTGATGTAGAATGAAAAGG 59.060 40.000 0.00 0.00 0.00 3.11
2329 2798 4.711846 TGTAGCTGGTGACTGATGTAGAAT 59.288 41.667 0.00 0.00 0.00 2.40
2333 2802 3.832490 ACTTGTAGCTGGTGACTGATGTA 59.168 43.478 0.00 0.00 0.00 2.29
2334 2803 2.634940 ACTTGTAGCTGGTGACTGATGT 59.365 45.455 0.00 0.00 0.00 3.06
2427 2896 8.055402 CACACCACAAATTTTTAGAAATTCGTG 58.945 33.333 13.11 13.11 44.25 4.35
2458 2928 7.050377 TCCATGATATTTCTTTGGAGTCTCAC 58.950 38.462 1.47 0.00 32.99 3.51
2509 2979 5.604758 AGCATGACTACTGCAGAGATTAA 57.395 39.130 23.35 1.21 42.15 1.40
2524 2994 5.023533 TCTATGGTTTGTCCTAGCATGAC 57.976 43.478 0.00 0.00 35.52 3.06
2525 2995 5.692115 TTCTATGGTTTGTCCTAGCATGA 57.308 39.130 0.00 0.00 35.52 3.07
2527 2997 6.662755 TGAATTCTATGGTTTGTCCTAGCAT 58.337 36.000 7.05 0.00 37.48 3.79
2528 2998 6.061022 TGAATTCTATGGTTTGTCCTAGCA 57.939 37.500 7.05 0.00 37.07 3.49
2529 2999 7.336931 TCTTTGAATTCTATGGTTTGTCCTAGC 59.663 37.037 7.05 0.00 37.07 3.42
2531 3001 8.602424 TCTCTTTGAATTCTATGGTTTGTCCTA 58.398 33.333 7.05 0.00 37.07 2.94
2548 3018 4.017126 TCCTCGATAGCACTCTCTTTGAA 58.983 43.478 0.00 0.00 0.00 2.69
2575 3045 3.859961 ACGTCAGATCACAATCATTCGAC 59.140 43.478 0.00 0.00 34.07 4.20
2607 3077 3.067833 GGACTTTCTCAGTACCTGCAAC 58.932 50.000 0.00 0.00 35.01 4.17
2691 3161 5.569059 GTGAATTTCTCCATGTAAACTTGCG 59.431 40.000 0.00 0.00 0.00 4.85
2723 3193 8.144155 TCAACACAAATATGTAGTTCGTTGAA 57.856 30.769 0.00 0.00 41.03 2.69
2734 3204 9.905713 AGGTCAGTTATATCAACACAAATATGT 57.094 29.630 0.00 0.00 41.61 2.29
2847 3318 8.450578 TCCATTAAAATTATAGAGCTGGTGTG 57.549 34.615 0.00 0.00 0.00 3.82
2851 3322 8.112183 AGGGATCCATTAAAATTATAGAGCTGG 58.888 37.037 15.23 0.00 0.00 4.85
2866 3337 6.660521 GCAATACATCATGAAGGGATCCATTA 59.339 38.462 12.49 0.00 0.00 1.90
2914 3385 9.050601 GTTAGATAGGCAATCATTCCTATATGC 57.949 37.037 10.78 0.00 43.65 3.14
2919 3390 9.288576 CAAATGTTAGATAGGCAATCATTCCTA 57.711 33.333 1.64 0.00 39.11 2.94
2920 3391 7.781693 ACAAATGTTAGATAGGCAATCATTCCT 59.218 33.333 1.64 0.00 37.03 3.36
2921 3392 7.945134 ACAAATGTTAGATAGGCAATCATTCC 58.055 34.615 1.64 0.00 37.03 3.01
2924 3395 8.517878 GCATACAAATGTTAGATAGGCAATCAT 58.482 33.333 0.00 0.00 34.80 2.45
2925 3396 7.501892 TGCATACAAATGTTAGATAGGCAATCA 59.498 33.333 0.00 0.00 34.80 2.57
2926 3397 7.874940 TGCATACAAATGTTAGATAGGCAATC 58.125 34.615 0.00 0.00 35.38 2.67
2927 3398 7.822161 TGCATACAAATGTTAGATAGGCAAT 57.178 32.000 0.00 0.00 35.38 3.56
2928 3399 7.822161 ATGCATACAAATGTTAGATAGGCAA 57.178 32.000 0.00 0.00 35.38 4.52
2958 3429 9.838339 CCAGAACCCATCATTCCTAATATATAC 57.162 37.037 0.00 0.00 0.00 1.47
2959 3430 8.494433 GCCAGAACCCATCATTCCTAATATATA 58.506 37.037 0.00 0.00 0.00 0.86
2960 3431 7.036644 TGCCAGAACCCATCATTCCTAATATAT 60.037 37.037 0.00 0.00 0.00 0.86
2961 3432 6.274436 TGCCAGAACCCATCATTCCTAATATA 59.726 38.462 0.00 0.00 0.00 0.86
2962 3433 5.074929 TGCCAGAACCCATCATTCCTAATAT 59.925 40.000 0.00 0.00 0.00 1.28
2963 3434 4.415179 TGCCAGAACCCATCATTCCTAATA 59.585 41.667 0.00 0.00 0.00 0.98
2964 3435 3.205056 TGCCAGAACCCATCATTCCTAAT 59.795 43.478 0.00 0.00 0.00 1.73
2965 3436 2.580322 TGCCAGAACCCATCATTCCTAA 59.420 45.455 0.00 0.00 0.00 2.69
2982 3453 1.769026 TGCCAACTGTAGTTTTGCCA 58.231 45.000 11.37 0.00 35.83 4.92
3000 3471 5.698545 GCCCAGTACTTCAGCTATTATCTTG 59.301 44.000 0.00 0.00 0.00 3.02
3021 3492 4.273318 ACCTGTCAAAGAATGAATAGCCC 58.727 43.478 0.00 0.00 40.50 5.19
3047 3518 5.114780 TGCTGCAGTTATCAGAGAGAAATC 58.885 41.667 16.64 0.00 33.54 2.17
3121 3592 4.093703 CACGCGGATAAAATTACTGAACCA 59.906 41.667 12.47 0.00 0.00 3.67
3126 3597 2.612212 AGGCACGCGGATAAAATTACTG 59.388 45.455 12.47 0.00 0.00 2.74
3128 3599 3.547413 GGAAGGCACGCGGATAAAATTAC 60.547 47.826 12.47 0.00 0.00 1.89
3132 3603 0.035820 AGGAAGGCACGCGGATAAAA 60.036 50.000 12.47 0.00 0.00 1.52
3137 3608 2.668212 CAAAGGAAGGCACGCGGA 60.668 61.111 12.47 0.00 0.00 5.54
3139 3610 2.175184 CTGTCAAAGGAAGGCACGCG 62.175 60.000 3.53 3.53 0.00 6.01
3141 3612 0.588252 CACTGTCAAAGGAAGGCACG 59.412 55.000 0.00 0.00 0.00 5.34
3144 3615 3.127721 GCTTATCACTGTCAAAGGAAGGC 59.872 47.826 0.00 0.00 0.00 4.35
3146 3617 4.394300 CCAGCTTATCACTGTCAAAGGAAG 59.606 45.833 0.00 0.00 33.09 3.46
3147 3618 4.202461 ACCAGCTTATCACTGTCAAAGGAA 60.202 41.667 0.00 0.00 33.09 3.36
3151 3622 4.713553 TCAACCAGCTTATCACTGTCAAA 58.286 39.130 0.00 0.00 33.09 2.69
3154 3625 2.675348 GCTCAACCAGCTTATCACTGTC 59.325 50.000 0.00 0.00 45.83 3.51
3186 3657 5.339008 AAATCTCAGCAACTGACGGTATA 57.661 39.130 0.00 0.00 35.39 1.47
3195 3666 3.823304 GGACCTGAAAAATCTCAGCAACT 59.177 43.478 0.00 0.00 41.36 3.16
3198 3669 3.507162 TGGACCTGAAAAATCTCAGCA 57.493 42.857 0.00 0.00 41.36 4.41
3293 3764 5.526846 AGAGAAAAGAAGAGCACTGTGAAAG 59.473 40.000 12.86 0.00 0.00 2.62
3296 3767 4.502259 GGAGAGAAAAGAAGAGCACTGTGA 60.502 45.833 12.86 0.00 0.00 3.58
3297 3768 3.745458 GGAGAGAAAAGAAGAGCACTGTG 59.255 47.826 2.76 2.76 0.00 3.66
3299 3770 3.244353 TGGGAGAGAAAAGAAGAGCACTG 60.244 47.826 0.00 0.00 0.00 3.66
3300 3771 2.975489 TGGGAGAGAAAAGAAGAGCACT 59.025 45.455 0.00 0.00 0.00 4.40
3302 3773 3.584406 TCATGGGAGAGAAAAGAAGAGCA 59.416 43.478 0.00 0.00 0.00 4.26
3304 3775 5.743117 ACATCATGGGAGAGAAAAGAAGAG 58.257 41.667 0.00 0.00 0.00 2.85
3305 3776 5.768980 ACATCATGGGAGAGAAAAGAAGA 57.231 39.130 0.00 0.00 0.00 2.87
3308 3779 7.148018 GCAAATTACATCATGGGAGAGAAAAGA 60.148 37.037 0.00 0.00 0.00 2.52
3309 3780 6.976925 GCAAATTACATCATGGGAGAGAAAAG 59.023 38.462 0.00 0.00 0.00 2.27
3310 3781 6.127366 GGCAAATTACATCATGGGAGAGAAAA 60.127 38.462 0.00 0.00 0.00 2.29
3311 3782 5.360714 GGCAAATTACATCATGGGAGAGAAA 59.639 40.000 0.00 0.00 0.00 2.52
3318 3825 6.014413 TGGATAATGGCAAATTACATCATGGG 60.014 38.462 0.00 0.00 0.00 4.00
3319 3826 6.869913 GTGGATAATGGCAAATTACATCATGG 59.130 38.462 0.00 0.00 0.00 3.66
3329 3836 4.162131 GGTTTGAGGTGGATAATGGCAAAT 59.838 41.667 0.00 0.00 0.00 2.32
3338 3845 2.945440 GCATGCAGGTTTGAGGTGGATA 60.945 50.000 14.21 0.00 0.00 2.59
3339 3846 1.843368 CATGCAGGTTTGAGGTGGAT 58.157 50.000 0.00 0.00 0.00 3.41
3347 3854 4.380841 AATATCACAGCATGCAGGTTTG 57.619 40.909 21.98 11.50 42.53 2.93
3351 3858 4.001652 CTCCTAATATCACAGCATGCAGG 58.998 47.826 21.98 14.19 42.53 4.85
3352 3859 4.451435 CACTCCTAATATCACAGCATGCAG 59.549 45.833 21.98 15.38 42.53 4.41
3354 3861 3.188048 GCACTCCTAATATCACAGCATGC 59.812 47.826 10.51 10.51 42.53 4.06
3368 3875 2.901338 AGACCACTACAGCACTCCTA 57.099 50.000 0.00 0.00 0.00 2.94
3369 3876 2.448453 GTAGACCACTACAGCACTCCT 58.552 52.381 0.00 0.00 45.72 3.69
3370 3877 2.943449 GTAGACCACTACAGCACTCC 57.057 55.000 0.00 0.00 45.72 3.85
3437 3944 9.144747 CTCTTGAGAAGTCGAATGAAATAAGAA 57.855 33.333 0.00 0.00 0.00 2.52
3590 4098 9.893305 GCAATTTCACACAGTAAACTTAGTAAT 57.107 29.630 0.00 0.00 0.00 1.89
3602 4110 2.936202 ACTCCTGCAATTTCACACAGT 58.064 42.857 0.00 0.00 0.00 3.55
3603 4111 3.996150 AACTCCTGCAATTTCACACAG 57.004 42.857 0.00 0.00 0.00 3.66
3604 4112 6.883756 TCATATAACTCCTGCAATTTCACACA 59.116 34.615 0.00 0.00 0.00 3.72
3606 4114 6.543465 CCTCATATAACTCCTGCAATTTCACA 59.457 38.462 0.00 0.00 0.00 3.58
3630 4139 4.828072 AACCAGATAGTGAGTCCTTTCC 57.172 45.455 0.00 0.00 0.00 3.13
3801 4310 5.886960 ACAAACAATCATTAGCTCTGTCC 57.113 39.130 0.00 0.00 0.00 4.02
3818 4327 1.660264 CCTGCGCGGGAAAACAAAC 60.660 57.895 32.31 0.00 0.00 2.93
3904 4413 6.598064 CGTTAGGAAACATACTTTCAAGGGAT 59.402 38.462 0.00 0.00 35.16 3.85
3987 4496 1.682087 GGTGGACCATGTAGGCCTTTC 60.682 57.143 12.58 5.51 43.14 2.62
4027 4536 4.097286 AGCAATGGTGTAAAAACTGAACGT 59.903 37.500 0.00 0.00 0.00 3.99
4089 4598 7.381766 TCACATCATTATGTCCTTGTTTGAG 57.618 36.000 0.00 0.00 44.70 3.02
4296 4805 6.484364 ACCATTGGTTGTCATCTTTCTTTT 57.516 33.333 1.37 0.00 27.29 2.27
4482 4993 9.911788 ATATAGCTATTTACTCCCAAATCCATG 57.088 33.333 12.39 0.00 30.84 3.66
4510 5022 7.067496 ACAAGGGATATCACTTAACGATGAT 57.933 36.000 19.78 0.00 37.54 2.45
4511 5023 6.479972 ACAAGGGATATCACTTAACGATGA 57.520 37.500 19.78 0.00 37.54 2.92
4512 5024 7.207383 TGTACAAGGGATATCACTTAACGATG 58.793 38.462 19.78 9.95 37.54 3.84
4817 5333 6.547880 TCCTGCAATGTTTTCCTTTAACTGTA 59.452 34.615 0.00 0.00 0.00 2.74
4994 5515 6.259550 ACTCATTTTTGCACATACTCTTCC 57.740 37.500 0.00 0.00 0.00 3.46
5063 5584 5.470098 ACATACGGGTTGAATGAGATTATGC 59.530 40.000 0.00 0.00 0.00 3.14
5234 5755 2.094258 CGTGTGTGTAGCCTGCATTTAG 59.906 50.000 0.00 0.00 0.00 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.