Multiple sequence alignment - TraesCS2D01G522200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G522200 chr2D 100.000 2746 0 0 1 2746 610865355 610862610 0.000000e+00 5072.0
1 TraesCS2D01G522200 chr2D 87.856 1054 62 23 780 1812 619339471 619338463 0.000000e+00 1177.0
2 TraesCS2D01G522200 chr2D 86.486 148 20 0 1 148 471525301 471525154 2.190000e-36 163.0
3 TraesCS2D01G522200 chr2D 100.000 41 0 0 747 787 619339451 619339411 2.930000e-10 76.8
4 TraesCS2D01G522200 chr2D 100.000 35 0 0 720 754 619339456 619339422 6.350000e-07 65.8
5 TraesCS2D01G522200 chr2B 90.716 1551 69 36 779 2274 757900670 757899140 0.000000e+00 1997.0
6 TraesCS2D01G522200 chr2B 87.953 1021 67 20 804 1790 757926556 757925558 0.000000e+00 1153.0
7 TraesCS2D01G522200 chr2B 93.042 503 29 6 1773 2274 757925527 757925030 0.000000e+00 730.0
8 TraesCS2D01G522200 chr6B 91.785 633 33 4 1 631 560627611 560626996 0.000000e+00 863.0
9 TraesCS2D01G522200 chr3A 85.312 497 47 7 155 633 215200803 215201291 8.840000e-135 490.0
10 TraesCS2D01G522200 chr3A 89.685 349 33 3 168 515 141974302 141973956 2.510000e-120 442.0
11 TraesCS2D01G522200 chr3A 87.558 217 12 1 452 668 141973928 141973727 1.270000e-58 237.0
12 TraesCS2D01G522200 chr7B 90.057 352 33 2 168 519 246613789 246613440 3.220000e-124 455.0
13 TraesCS2D01G522200 chr7B 85.714 217 9 5 452 668 246613416 246613222 2.770000e-50 209.0
14 TraesCS2D01G522200 chr7B 87.387 111 10 4 310 416 494550783 494550673 1.030000e-24 124.0
15 TraesCS2D01G522200 chr6A 89.548 354 33 4 168 519 495470132 495470483 1.940000e-121 446.0
16 TraesCS2D01G522200 chr6A 87.062 371 35 6 158 523 30474069 30474431 9.160000e-110 407.0
17 TraesCS2D01G522200 chr6A 87.097 217 13 1 452 668 495470507 495470708 5.910000e-57 231.0
18 TraesCS2D01G522200 chr6A 78.526 312 34 17 364 668 30473599 30473314 1.010000e-39 174.0
19 TraesCS2D01G522200 chr3D 88.705 363 24 3 308 668 286535883 286536230 7.030000e-116 427.0
20 TraesCS2D01G522200 chr3D 95.690 116 5 0 155 270 286535769 286535884 1.300000e-43 187.0
21 TraesCS2D01G522200 chr3D 89.262 149 12 2 1 149 474508928 474508784 1.680000e-42 183.0
22 TraesCS2D01G522200 chr3D 85.235 149 19 2 1 149 380529945 380529800 1.700000e-32 150.0
23 TraesCS2D01G522200 chr2A 88.701 354 35 5 168 519 55562471 55562821 7.030000e-116 427.0
24 TraesCS2D01G522200 chr2A 87.097 217 13 2 452 668 55562845 55563046 5.910000e-57 231.0
25 TraesCS2D01G522200 chr7A 89.053 338 19 6 332 668 37079799 37079479 1.180000e-108 403.0
26 TraesCS2D01G522200 chr1B 87.215 219 12 6 450 668 606565832 606566034 4.570000e-58 235.0
27 TraesCS2D01G522200 chr1B 88.690 168 17 2 168 335 606565664 606565829 1.290000e-48 204.0
28 TraesCS2D01G522200 chr1B 87.162 148 19 0 1 148 658948142 658947995 4.700000e-38 169.0
29 TraesCS2D01G522200 chr5D 91.270 126 7 2 21 146 477035300 477035421 4.700000e-38 169.0
30 TraesCS2D01G522200 chr5D 85.906 149 19 1 1 149 445868282 445868428 1.020000e-34 158.0
31 TraesCS2D01G522200 chr7D 86.184 152 20 1 1 151 632367124 632367275 2.190000e-36 163.0
32 TraesCS2D01G522200 chr7D 85.235 149 22 0 1 149 599080197 599080049 1.320000e-33 154.0
33 TraesCS2D01G522200 chr3B 86.486 148 18 2 522 668 685847481 685847335 7.870000e-36 161.0
34 TraesCS2D01G522200 chr1D 89.720 107 7 3 318 420 309578574 309578468 1.720000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G522200 chr2D 610862610 610865355 2745 True 5072.000000 5072 100.0000 1 2746 1 chr2D.!!$R2 2745
1 TraesCS2D01G522200 chr2D 619338463 619339471 1008 True 439.866667 1177 95.9520 720 1812 3 chr2D.!!$R3 1092
2 TraesCS2D01G522200 chr2B 757899140 757900670 1530 True 1997.000000 1997 90.7160 779 2274 1 chr2B.!!$R1 1495
3 TraesCS2D01G522200 chr2B 757925030 757926556 1526 True 941.500000 1153 90.4975 804 2274 2 chr2B.!!$R2 1470
4 TraesCS2D01G522200 chr6B 560626996 560627611 615 True 863.000000 863 91.7850 1 631 1 chr6B.!!$R1 630
5 TraesCS2D01G522200 chr3A 141973727 141974302 575 True 339.500000 442 88.6215 168 668 2 chr3A.!!$R1 500
6 TraesCS2D01G522200 chr7B 246613222 246613789 567 True 332.000000 455 87.8855 168 668 2 chr7B.!!$R2 500
7 TraesCS2D01G522200 chr6A 495470132 495470708 576 False 338.500000 446 88.3225 168 668 2 chr6A.!!$F2 500
8 TraesCS2D01G522200 chr2A 55562471 55563046 575 False 329.000000 427 87.8990 168 668 2 chr2A.!!$F1 500

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
699 794 0.033699 AGCAAATCCCCTTCTCCTGC 60.034 55.0 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2432 2656 0.032515 TCCGGTTCCTAGCTGGATCA 60.033 55.0 0.0 0.0 45.68 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.374252 GGTGATTCGGACAGCGTGT 60.374 57.895 0.00 0.00 0.00 4.49
34 35 4.115516 CAGCGTGTTGAACTCTATATGCT 58.884 43.478 0.00 0.00 36.07 3.79
35 36 4.208047 CAGCGTGTTGAACTCTATATGCTC 59.792 45.833 0.00 0.00 34.25 4.26
40 41 1.335964 TGAACTCTATATGCTCCGCGC 60.336 52.381 0.00 0.00 39.77 6.86
41 42 0.387367 AACTCTATATGCTCCGCGCG 60.387 55.000 25.67 25.67 43.27 6.86
42 43 2.126463 TCTATATGCTCCGCGCGC 60.126 61.111 27.36 23.91 43.27 6.86
79 80 1.276421 CTGGAGCCCGGATATCGATTT 59.724 52.381 0.73 0.00 42.43 2.17
80 81 1.697432 TGGAGCCCGGATATCGATTTT 59.303 47.619 0.73 0.00 42.43 1.82
113 114 3.468841 CACAAATTTGCGGCGCGG 61.469 61.111 28.09 11.08 0.00 6.46
141 142 1.388837 TAGCGCCGCTGTTGGAGATA 61.389 55.000 23.97 0.00 40.10 1.98
144 145 0.872021 CGCCGCTGTTGGAGATACTC 60.872 60.000 0.00 0.00 0.00 2.59
151 152 4.116238 GCTGTTGGAGATACTCTTAGCAC 58.884 47.826 0.00 0.00 0.00 4.40
154 155 5.479306 TGTTGGAGATACTCTTAGCACAAC 58.521 41.667 0.00 0.00 35.76 3.32
172 173 1.303799 ACGACTTCGGCTCGCTCTAA 61.304 55.000 3.30 0.00 44.95 2.10
213 214 3.698040 GGTCTCTACGGACTTGGATGTAA 59.302 47.826 0.00 0.00 36.55 2.41
322 323 5.718649 AATGATGAATAGTGTTCGTTCGG 57.281 39.130 0.00 0.00 0.00 4.30
463 465 6.734104 AATCTTGCTTTGCTACTCAACTAG 57.266 37.500 0.00 0.00 33.73 2.57
517 611 3.622459 ACAAACGTTGTCAAGCTGC 57.378 47.368 0.00 0.00 40.56 5.25
518 612 1.094785 ACAAACGTTGTCAAGCTGCT 58.905 45.000 0.00 0.00 40.56 4.24
519 613 1.472480 ACAAACGTTGTCAAGCTGCTT 59.528 42.857 9.53 9.53 40.56 3.91
520 614 2.094752 ACAAACGTTGTCAAGCTGCTTT 60.095 40.909 13.10 0.00 40.56 3.51
619 714 4.043200 GCCCAGTGCGCCTGTTTC 62.043 66.667 19.93 8.51 39.74 2.78
627 722 2.863153 CGCCTGTTTCGCTGGAAG 59.137 61.111 0.00 0.00 38.33 3.46
633 728 1.172180 TGTTTCGCTGGAAGGCAAGG 61.172 55.000 0.00 0.00 32.80 3.61
634 729 2.268076 TTTCGCTGGAAGGCAAGGC 61.268 57.895 0.00 0.00 32.80 4.35
652 747 4.008933 GGCACGCCACCTCTGACT 62.009 66.667 2.36 0.00 35.81 3.41
672 767 2.202932 CCTTCGGGCACGGATCTG 60.203 66.667 9.32 0.00 41.39 2.90
673 768 2.202932 CTTCGGGCACGGATCTGG 60.203 66.667 9.32 0.00 41.39 3.86
674 769 3.000819 TTCGGGCACGGATCTGGT 61.001 61.111 9.32 0.00 41.39 4.00
675 770 2.521958 CTTCGGGCACGGATCTGGTT 62.522 60.000 9.32 0.00 41.39 3.67
676 771 2.511600 CGGGCACGGATCTGGTTC 60.512 66.667 0.00 0.00 36.18 3.62
677 772 2.124695 GGGCACGGATCTGGTTCC 60.125 66.667 6.47 3.62 0.00 3.62
678 773 2.124695 GGCACGGATCTGGTTCCC 60.125 66.667 6.47 0.00 31.61 3.97
679 774 2.124695 GCACGGATCTGGTTCCCC 60.125 66.667 6.47 0.00 31.61 4.81
680 775 2.966732 GCACGGATCTGGTTCCCCA 61.967 63.158 6.47 0.00 38.87 4.96
688 783 4.863415 TGGTTCCCCAGCAAATCC 57.137 55.556 0.00 0.00 35.17 3.01
689 784 1.078347 TGGTTCCCCAGCAAATCCC 59.922 57.895 0.00 0.00 35.17 3.85
690 785 1.685765 GGTTCCCCAGCAAATCCCC 60.686 63.158 0.00 0.00 0.00 4.81
691 786 1.388133 GTTCCCCAGCAAATCCCCT 59.612 57.895 0.00 0.00 0.00 4.79
692 787 0.252239 GTTCCCCAGCAAATCCCCTT 60.252 55.000 0.00 0.00 0.00 3.95
693 788 0.041090 TTCCCCAGCAAATCCCCTTC 59.959 55.000 0.00 0.00 0.00 3.46
694 789 0.850883 TCCCCAGCAAATCCCCTTCT 60.851 55.000 0.00 0.00 0.00 2.85
695 790 0.396278 CCCCAGCAAATCCCCTTCTC 60.396 60.000 0.00 0.00 0.00 2.87
696 791 0.396278 CCCAGCAAATCCCCTTCTCC 60.396 60.000 0.00 0.00 0.00 3.71
697 792 0.627986 CCAGCAAATCCCCTTCTCCT 59.372 55.000 0.00 0.00 0.00 3.69
698 793 1.684248 CCAGCAAATCCCCTTCTCCTG 60.684 57.143 0.00 0.00 0.00 3.86
699 794 0.033699 AGCAAATCCCCTTCTCCTGC 60.034 55.000 0.00 0.00 0.00 4.85
700 795 0.033699 GCAAATCCCCTTCTCCTGCT 60.034 55.000 0.00 0.00 0.00 4.24
701 796 2.021208 GCAAATCCCCTTCTCCTGCTC 61.021 57.143 0.00 0.00 0.00 4.26
702 797 1.283029 CAAATCCCCTTCTCCTGCTCA 59.717 52.381 0.00 0.00 0.00 4.26
703 798 1.211456 AATCCCCTTCTCCTGCTCAG 58.789 55.000 0.00 0.00 0.00 3.35
713 808 2.352805 CTGCTCAGGAACCCACCC 59.647 66.667 0.00 0.00 0.00 4.61
714 809 2.121963 TGCTCAGGAACCCACCCT 60.122 61.111 0.00 0.00 0.00 4.34
715 810 2.190488 CTGCTCAGGAACCCACCCTC 62.190 65.000 0.00 0.00 0.00 4.30
716 811 2.982130 CTCAGGAACCCACCCTCG 59.018 66.667 0.00 0.00 0.00 4.63
717 812 2.606519 TCAGGAACCCACCCTCGG 60.607 66.667 0.00 0.00 0.00 4.63
738 833 4.745751 CCGCGCCGGTAAGGTTCA 62.746 66.667 1.90 0.00 42.73 3.18
739 834 3.484547 CGCGCCGGTAAGGTTCAC 61.485 66.667 1.90 0.00 43.70 3.18
740 835 3.122971 GCGCCGGTAAGGTTCACC 61.123 66.667 1.90 0.00 43.70 4.02
747 842 1.648504 GGTAAGGTTCACCGGAATCG 58.351 55.000 9.46 0.00 39.21 3.34
748 843 1.004595 GTAAGGTTCACCGGAATCGC 58.995 55.000 9.46 0.00 39.21 4.58
749 844 0.108041 TAAGGTTCACCGGAATCGCC 60.108 55.000 9.46 3.35 39.21 5.54
758 853 4.948257 GGAATCGCCGGTAAGGTT 57.052 55.556 1.90 0.00 43.70 3.50
759 854 2.686602 GGAATCGCCGGTAAGGTTC 58.313 57.895 1.90 7.24 43.70 3.62
760 855 0.108041 GGAATCGCCGGTAAGGTTCA 60.108 55.000 17.15 0.00 43.70 3.18
761 856 1.004595 GAATCGCCGGTAAGGTTCAC 58.995 55.000 1.90 0.00 43.70 3.18
762 857 0.392060 AATCGCCGGTAAGGTTCACC 60.392 55.000 1.90 0.00 43.70 4.02
769 864 1.648504 GGTAAGGTTCACCGGAATCG 58.351 55.000 9.46 0.00 39.21 3.34
770 865 1.004595 GTAAGGTTCACCGGAATCGC 58.995 55.000 9.46 0.00 39.21 4.58
771 866 0.108041 TAAGGTTCACCGGAATCGCC 60.108 55.000 9.46 3.35 39.21 5.54
868 970 2.223409 TGGTTGACTCGATCCGATTACG 60.223 50.000 0.00 0.00 34.61 3.18
923 1026 1.801178 GAATTCGGAATCCCATCTCGC 59.199 52.381 3.28 0.00 0.00 5.03
973 1076 4.023536 GGCTCTGGCTCGCTATATATAGTC 60.024 50.000 18.81 11.32 38.73 2.59
981 1085 5.966503 GCTCGCTATATATAGTCGTCTTTGG 59.033 44.000 23.56 14.54 34.18 3.28
984 1088 7.303261 TCGCTATATATAGTCGTCTTTGGTTG 58.697 38.462 23.56 1.11 34.18 3.77
1004 1108 3.971032 GGATAATTTCCACCTCAAGCG 57.029 47.619 0.00 0.00 44.74 4.68
1005 1109 3.279434 GGATAATTTCCACCTCAAGCGT 58.721 45.455 0.00 0.00 44.74 5.07
1006 1110 4.448210 GGATAATTTCCACCTCAAGCGTA 58.552 43.478 0.00 0.00 44.74 4.42
1038 1142 4.478371 CCATCTCCAGCCGCTGCA 62.478 66.667 15.36 0.00 41.13 4.41
1045 1149 2.338015 CCAGCCGCTGCATCTTGTT 61.338 57.895 15.36 0.00 41.13 2.83
1056 1160 3.254024 ATCTTGTTGCCGAGCCCGT 62.254 57.895 0.00 0.00 0.00 5.28
1057 1161 3.423154 CTTGTTGCCGAGCCCGTC 61.423 66.667 0.00 0.00 0.00 4.79
1077 1209 4.038763 CGTCTCTCTCTCTCTCTTAGCCTA 59.961 50.000 0.00 0.00 0.00 3.93
1193 1325 1.906574 AGCAATTCCTGGAACGAGGTA 59.093 47.619 12.11 0.00 34.36 3.08
1231 1363 1.813753 CCGGTTGCCGTTGATCGAT 60.814 57.895 0.00 0.00 46.80 3.59
1249 1381 5.305139 TCGATCAAGAACTCGACATGTTA 57.695 39.130 0.00 0.00 38.86 2.41
1254 1386 5.220381 TCAAGAACTCGACATGTTACAGAC 58.780 41.667 0.00 0.00 0.00 3.51
1295 1439 1.531739 GAGCCGCTATGAGGAGGAGG 61.532 65.000 0.00 0.00 0.00 4.30
1296 1440 1.531840 GCCGCTATGAGGAGGAGGA 60.532 63.158 0.00 0.00 0.00 3.71
1297 1441 1.531739 GCCGCTATGAGGAGGAGGAG 61.532 65.000 0.00 0.00 0.00 3.69
1336 1480 1.675219 GCCGAGTTTGGTAGTCCCA 59.325 57.895 0.00 0.00 43.27 4.37
1436 1580 1.522668 CGTGTGCCTCAAGGATTTCA 58.477 50.000 0.00 0.00 37.39 2.69
1497 1641 2.375174 ACTTCCACCAAGGTTGCATCTA 59.625 45.455 0.00 0.00 36.26 1.98
1601 1765 2.544685 CGACAAGTCCATCTCCATGAC 58.455 52.381 0.00 0.00 30.57 3.06
1651 1815 0.538057 TTCAAGCCAGGCAGACAAGG 60.538 55.000 15.80 0.00 0.00 3.61
1771 1993 1.298859 CTAGAGCAACGTTGTGGCCC 61.299 60.000 27.78 11.98 31.88 5.80
1772 1994 2.741486 TAGAGCAACGTTGTGGCCCC 62.741 60.000 27.78 11.27 31.88 5.80
1773 1995 4.204028 AGCAACGTTGTGGCCCCT 62.204 61.111 27.78 13.35 31.88 4.79
1774 1996 3.670377 GCAACGTTGTGGCCCCTC 61.670 66.667 27.78 6.35 0.00 4.30
1775 1997 2.113139 CAACGTTGTGGCCCCTCT 59.887 61.111 20.21 0.00 0.00 3.69
1776 1998 1.966451 CAACGTTGTGGCCCCTCTC 60.966 63.158 20.21 0.00 0.00 3.20
1777 1999 2.147387 AACGTTGTGGCCCCTCTCT 61.147 57.895 0.00 0.00 0.00 3.10
1778 2000 2.113243 AACGTTGTGGCCCCTCTCTC 62.113 60.000 0.00 0.00 0.00 3.20
1779 2001 2.286523 CGTTGTGGCCCCTCTCTCT 61.287 63.158 0.00 0.00 0.00 3.10
1780 2002 1.599576 GTTGTGGCCCCTCTCTCTC 59.400 63.158 0.00 0.00 0.00 3.20
1783 2005 2.124693 GTGGCCCCTCTCTCTCTCG 61.125 68.421 0.00 0.00 0.00 4.04
1795 2017 3.438781 TCTCTCTCTCGCTCTCTGTTTTC 59.561 47.826 0.00 0.00 0.00 2.29
1940 2163 7.129504 ACTGATGATATTAGGGTCCCTTTTCTT 59.870 37.037 17.94 6.48 34.61 2.52
2046 2269 5.827797 ACTCTCAAGCAAAATACCTTTGACA 59.172 36.000 1.49 0.00 46.35 3.58
2151 2375 3.866883 ACCATGCCCTTACAATTTTCG 57.133 42.857 0.00 0.00 0.00 3.46
2167 2391 3.546002 TTTCGCTCCAAACAATAACCG 57.454 42.857 0.00 0.00 0.00 4.44
2188 2412 1.625315 TGGTGTTCAGACTCTGATGGG 59.375 52.381 9.63 0.00 40.39 4.00
2195 2419 5.719563 TGTTCAGACTCTGATGGGTGTATTA 59.280 40.000 9.63 0.00 40.39 0.98
2265 2489 3.902881 ACTGATAGGCTGAAGAACTGG 57.097 47.619 0.00 0.00 0.00 4.00
2268 2492 4.287067 ACTGATAGGCTGAAGAACTGGAAA 59.713 41.667 0.00 0.00 0.00 3.13
2269 2493 5.045286 ACTGATAGGCTGAAGAACTGGAAAT 60.045 40.000 0.00 0.00 0.00 2.17
2270 2494 5.431765 TGATAGGCTGAAGAACTGGAAATC 58.568 41.667 0.00 0.00 0.00 2.17
2271 2495 3.795688 AGGCTGAAGAACTGGAAATCA 57.204 42.857 0.00 0.00 0.00 2.57
2275 2499 3.190118 GCTGAAGAACTGGAAATCAGGTG 59.810 47.826 0.00 0.00 44.85 4.00
2276 2500 3.754965 TGAAGAACTGGAAATCAGGTGG 58.245 45.455 0.00 0.00 44.85 4.61
2277 2501 3.138283 TGAAGAACTGGAAATCAGGTGGT 59.862 43.478 0.00 0.00 44.85 4.16
2278 2502 3.884037 AGAACTGGAAATCAGGTGGTT 57.116 42.857 0.00 0.00 44.85 3.67
2279 2503 3.490348 AGAACTGGAAATCAGGTGGTTG 58.510 45.455 0.00 0.00 44.85 3.77
2280 2504 2.558359 GAACTGGAAATCAGGTGGTTGG 59.442 50.000 0.00 0.00 44.85 3.77
2281 2505 1.549203 CTGGAAATCAGGTGGTTGGG 58.451 55.000 0.00 0.00 39.76 4.12
2282 2506 0.541764 TGGAAATCAGGTGGTTGGGC 60.542 55.000 0.00 0.00 0.00 5.36
2283 2507 0.251787 GGAAATCAGGTGGTTGGGCT 60.252 55.000 0.00 0.00 0.00 5.19
2284 2508 1.632589 GAAATCAGGTGGTTGGGCTT 58.367 50.000 0.00 0.00 0.00 4.35
2285 2509 1.273327 GAAATCAGGTGGTTGGGCTTG 59.727 52.381 0.00 0.00 0.00 4.01
2286 2510 0.542702 AATCAGGTGGTTGGGCTTGG 60.543 55.000 0.00 0.00 0.00 3.61
2287 2511 3.305516 CAGGTGGTTGGGCTTGGC 61.306 66.667 0.00 0.00 0.00 4.52
2288 2512 3.831637 AGGTGGTTGGGCTTGGCA 61.832 61.111 0.00 0.00 0.00 4.92
2289 2513 2.841988 GGTGGTTGGGCTTGGCAA 60.842 61.111 0.00 0.00 0.00 4.52
2290 2514 2.439104 GGTGGTTGGGCTTGGCAAA 61.439 57.895 0.00 0.00 0.00 3.68
2291 2515 1.069596 GTGGTTGGGCTTGGCAAAG 59.930 57.895 0.00 0.00 36.41 2.77
2292 2516 2.139484 TGGTTGGGCTTGGCAAAGG 61.139 57.895 2.26 0.00 33.68 3.11
2334 2558 4.148825 CCTCGAGGGCTGAACCGG 62.149 72.222 24.62 0.00 40.62 5.28
2335 2559 3.068691 CTCGAGGGCTGAACCGGA 61.069 66.667 9.46 0.00 40.62 5.14
2336 2560 2.363795 TCGAGGGCTGAACCGGAT 60.364 61.111 9.46 0.00 40.62 4.18
2337 2561 1.961180 CTCGAGGGCTGAACCGGATT 61.961 60.000 9.46 0.00 40.62 3.01
2338 2562 1.521681 CGAGGGCTGAACCGGATTC 60.522 63.158 9.46 9.24 40.62 2.52
2339 2563 1.521681 GAGGGCTGAACCGGATTCG 60.522 63.158 9.46 6.39 40.56 3.34
2340 2564 2.240162 GAGGGCTGAACCGGATTCGT 62.240 60.000 9.46 0.00 40.56 3.85
2341 2565 1.814169 GGGCTGAACCGGATTCGTC 60.814 63.158 9.46 6.57 40.56 4.20
2342 2566 1.814169 GGCTGAACCGGATTCGTCC 60.814 63.158 9.46 9.51 40.56 4.79
2343 2567 1.814169 GCTGAACCGGATTCGTCCC 60.814 63.158 9.46 0.00 40.56 4.46
2344 2568 1.518572 CTGAACCGGATTCGTCCCG 60.519 63.158 9.46 0.00 46.10 5.14
2345 2569 2.221906 CTGAACCGGATTCGTCCCGT 62.222 60.000 9.46 0.00 45.14 5.28
2346 2570 1.808390 GAACCGGATTCGTCCCGTG 60.808 63.158 9.46 6.18 45.14 4.94
2347 2571 3.305177 AACCGGATTCGTCCCGTGG 62.305 63.158 9.46 0.00 45.14 4.94
2348 2572 3.454573 CCGGATTCGTCCCGTGGA 61.455 66.667 0.00 0.00 45.14 4.02
2349 2573 2.792947 CCGGATTCGTCCCGTGGAT 61.793 63.158 0.00 0.00 45.14 3.41
2350 2574 1.591594 CGGATTCGTCCCGTGGATG 60.592 63.158 5.95 5.95 41.91 3.51
2351 2575 1.887707 GGATTCGTCCCGTGGATGC 60.888 63.158 7.15 0.00 38.52 3.91
2352 2576 1.144057 GATTCGTCCCGTGGATGCT 59.856 57.895 7.15 0.00 38.52 3.79
2353 2577 0.462047 GATTCGTCCCGTGGATGCTT 60.462 55.000 7.15 0.00 38.52 3.91
2354 2578 0.035439 ATTCGTCCCGTGGATGCTTT 60.035 50.000 7.15 0.00 38.52 3.51
2355 2579 0.953471 TTCGTCCCGTGGATGCTTTG 60.953 55.000 7.15 0.00 38.52 2.77
2356 2580 2.398554 CGTCCCGTGGATGCTTTGG 61.399 63.158 0.02 0.00 32.73 3.28
2357 2581 1.303317 GTCCCGTGGATGCTTTGGT 60.303 57.895 0.00 0.00 32.73 3.67
2358 2582 1.303236 TCCCGTGGATGCTTTGGTG 60.303 57.895 0.00 0.00 0.00 4.17
2359 2583 1.603455 CCCGTGGATGCTTTGGTGT 60.603 57.895 0.00 0.00 0.00 4.16
2360 2584 1.586154 CCCGTGGATGCTTTGGTGTC 61.586 60.000 0.00 0.00 0.00 3.67
2361 2585 0.606401 CCGTGGATGCTTTGGTGTCT 60.606 55.000 0.00 0.00 0.00 3.41
2362 2586 1.238439 CGTGGATGCTTTGGTGTCTT 58.762 50.000 0.00 0.00 0.00 3.01
2363 2587 1.197721 CGTGGATGCTTTGGTGTCTTC 59.802 52.381 0.00 0.00 0.00 2.87
2364 2588 1.197721 GTGGATGCTTTGGTGTCTTCG 59.802 52.381 0.00 0.00 0.00 3.79
2365 2589 0.169009 GGATGCTTTGGTGTCTTCGC 59.831 55.000 0.00 0.00 0.00 4.70
2366 2590 0.179215 GATGCTTTGGTGTCTTCGCG 60.179 55.000 0.00 0.00 0.00 5.87
2367 2591 0.602638 ATGCTTTGGTGTCTTCGCGA 60.603 50.000 3.71 3.71 0.00 5.87
2368 2592 1.204312 GCTTTGGTGTCTTCGCGAC 59.796 57.895 9.15 0.00 43.14 5.19
2369 2593 1.860078 CTTTGGTGTCTTCGCGACC 59.140 57.895 9.15 7.81 42.13 4.79
2370 2594 0.600255 CTTTGGTGTCTTCGCGACCT 60.600 55.000 9.15 0.00 42.13 3.85
2371 2595 0.675083 TTTGGTGTCTTCGCGACCTA 59.325 50.000 9.15 0.13 42.13 3.08
2372 2596 0.892755 TTGGTGTCTTCGCGACCTAT 59.107 50.000 9.15 0.00 42.13 2.57
2373 2597 0.454600 TGGTGTCTTCGCGACCTATC 59.545 55.000 9.15 0.00 42.13 2.08
2374 2598 0.739561 GGTGTCTTCGCGACCTATCT 59.260 55.000 9.15 0.00 42.13 1.98
2375 2599 1.945394 GGTGTCTTCGCGACCTATCTA 59.055 52.381 9.15 0.00 42.13 1.98
2376 2600 2.553172 GGTGTCTTCGCGACCTATCTAT 59.447 50.000 9.15 0.00 42.13 1.98
2377 2601 3.556513 GTGTCTTCGCGACCTATCTATG 58.443 50.000 9.15 0.00 42.13 2.23
2378 2602 2.552743 TGTCTTCGCGACCTATCTATGG 59.447 50.000 9.15 0.00 42.13 2.74
2379 2603 1.540267 TCTTCGCGACCTATCTATGGC 59.460 52.381 9.15 0.00 0.00 4.40
2380 2604 1.542030 CTTCGCGACCTATCTATGGCT 59.458 52.381 9.15 0.00 0.00 4.75
2381 2605 2.484742 TCGCGACCTATCTATGGCTA 57.515 50.000 3.71 0.00 0.00 3.93
2382 2606 2.082231 TCGCGACCTATCTATGGCTAC 58.918 52.381 3.71 0.00 0.00 3.58
2383 2607 1.132643 CGCGACCTATCTATGGCTACC 59.867 57.143 0.00 0.00 0.00 3.18
2384 2608 1.477295 GCGACCTATCTATGGCTACCC 59.523 57.143 0.00 0.00 0.00 3.69
2385 2609 2.100989 CGACCTATCTATGGCTACCCC 58.899 57.143 0.00 0.00 0.00 4.95
2406 2630 4.704833 GAAGGCGCTGGCTGACCA 62.705 66.667 7.64 0.00 46.51 4.02
2412 2636 4.314440 GCTGGCTGACCACCGTGA 62.314 66.667 0.00 0.00 42.67 4.35
2413 2637 2.665000 CTGGCTGACCACCGTGAT 59.335 61.111 0.00 0.00 42.67 3.06
2414 2638 1.897423 CTGGCTGACCACCGTGATA 59.103 57.895 0.00 0.00 42.67 2.15
2415 2639 0.249120 CTGGCTGACCACCGTGATAA 59.751 55.000 0.00 0.00 42.67 1.75
2416 2640 0.249120 TGGCTGACCACCGTGATAAG 59.751 55.000 0.00 0.00 42.67 1.73
2417 2641 1.090052 GGCTGACCACCGTGATAAGC 61.090 60.000 0.00 0.00 35.26 3.09
2418 2642 0.391130 GCTGACCACCGTGATAAGCA 60.391 55.000 0.00 0.00 0.00 3.91
2419 2643 1.359848 CTGACCACCGTGATAAGCAC 58.640 55.000 0.00 0.00 44.21 4.40
2420 2644 0.036765 TGACCACCGTGATAAGCACC 60.037 55.000 0.00 0.00 44.85 5.01
2421 2645 0.743345 GACCACCGTGATAAGCACCC 60.743 60.000 0.00 0.00 44.85 4.61
2422 2646 1.198759 ACCACCGTGATAAGCACCCT 61.199 55.000 0.00 0.00 44.85 4.34
2423 2647 0.462047 CCACCGTGATAAGCACCCTC 60.462 60.000 0.00 0.00 44.85 4.30
2424 2648 0.806102 CACCGTGATAAGCACCCTCG 60.806 60.000 0.00 0.00 44.85 4.63
2425 2649 0.968901 ACCGTGATAAGCACCCTCGA 60.969 55.000 0.00 0.00 44.85 4.04
2426 2650 0.174845 CCGTGATAAGCACCCTCGAA 59.825 55.000 0.00 0.00 44.85 3.71
2427 2651 1.278238 CGTGATAAGCACCCTCGAAC 58.722 55.000 0.00 0.00 44.85 3.95
2428 2652 1.403647 CGTGATAAGCACCCTCGAACA 60.404 52.381 0.00 0.00 44.85 3.18
2429 2653 2.695359 GTGATAAGCACCCTCGAACAA 58.305 47.619 0.00 0.00 41.78 2.83
2430 2654 2.415512 GTGATAAGCACCCTCGAACAAC 59.584 50.000 0.00 0.00 41.78 3.32
2431 2655 2.301870 TGATAAGCACCCTCGAACAACT 59.698 45.455 0.00 0.00 0.00 3.16
2432 2656 2.922740 TAAGCACCCTCGAACAACTT 57.077 45.000 0.00 0.00 0.00 2.66
2433 2657 1.308998 AAGCACCCTCGAACAACTTG 58.691 50.000 0.00 0.00 0.00 3.16
2434 2658 0.468226 AGCACCCTCGAACAACTTGA 59.532 50.000 0.00 0.00 0.00 3.02
2435 2659 1.072331 AGCACCCTCGAACAACTTGAT 59.928 47.619 0.00 0.00 0.00 2.57
2436 2660 1.464997 GCACCCTCGAACAACTTGATC 59.535 52.381 0.00 0.00 0.00 2.92
2437 2661 2.076863 CACCCTCGAACAACTTGATCC 58.923 52.381 0.00 0.00 0.00 3.36
2438 2662 1.697432 ACCCTCGAACAACTTGATCCA 59.303 47.619 0.00 0.00 0.00 3.41
2439 2663 2.289694 ACCCTCGAACAACTTGATCCAG 60.290 50.000 0.00 0.00 0.00 3.86
2440 2664 1.734465 CCTCGAACAACTTGATCCAGC 59.266 52.381 0.00 0.00 0.00 4.85
2441 2665 2.613977 CCTCGAACAACTTGATCCAGCT 60.614 50.000 0.00 0.00 0.00 4.24
2442 2666 3.368427 CCTCGAACAACTTGATCCAGCTA 60.368 47.826 0.00 0.00 0.00 3.32
2443 2667 3.849911 TCGAACAACTTGATCCAGCTAG 58.150 45.455 0.00 0.00 0.00 3.42
2444 2668 2.932614 CGAACAACTTGATCCAGCTAGG 59.067 50.000 0.00 0.00 39.47 3.02
2452 2676 4.878987 TCCAGCTAGGAACCGGAA 57.121 55.556 9.46 0.00 45.65 4.30
2453 2677 2.591915 TCCAGCTAGGAACCGGAAG 58.408 57.895 9.46 0.00 45.65 3.46
2454 2678 1.153349 CCAGCTAGGAACCGGAAGC 60.153 63.158 9.46 8.93 41.22 3.86
2455 2679 1.617947 CCAGCTAGGAACCGGAAGCT 61.618 60.000 9.46 11.23 45.94 3.74
2456 2680 1.112113 CAGCTAGGAACCGGAAGCTA 58.888 55.000 9.46 0.00 43.26 3.32
2457 2681 1.689273 CAGCTAGGAACCGGAAGCTAT 59.311 52.381 9.46 0.00 43.26 2.97
2458 2682 1.689273 AGCTAGGAACCGGAAGCTATG 59.311 52.381 9.46 0.00 43.29 2.23
2459 2683 1.413077 GCTAGGAACCGGAAGCTATGT 59.587 52.381 9.46 0.00 32.18 2.29
2460 2684 2.546162 GCTAGGAACCGGAAGCTATGTC 60.546 54.545 9.46 0.00 32.18 3.06
2461 2685 0.831307 AGGAACCGGAAGCTATGTCC 59.169 55.000 9.46 1.26 0.00 4.02
2468 2692 1.699343 GGAAGCTATGTCCGCGATAC 58.301 55.000 8.23 6.09 0.00 2.24
2469 2693 1.328439 GAAGCTATGTCCGCGATACG 58.672 55.000 8.23 0.00 43.15 3.06
2484 2708 2.155732 CGATACGCTGTACATGGATTGC 59.844 50.000 0.00 0.00 0.00 3.56
2485 2709 1.948104 TACGCTGTACATGGATTGCC 58.052 50.000 0.00 0.00 0.00 4.52
2495 2719 2.565647 TGGATTGCCATCGGTGTTG 58.434 52.632 0.00 0.00 39.92 3.33
2496 2720 0.964860 TGGATTGCCATCGGTGTTGG 60.965 55.000 0.00 0.00 39.92 3.77
2519 2743 4.028490 CCTGGCCGTGGGTTGCTA 62.028 66.667 6.70 0.00 0.00 3.49
2520 2744 2.746277 CTGGCCGTGGGTTGCTAC 60.746 66.667 0.00 0.00 0.00 3.58
2521 2745 4.690719 TGGCCGTGGGTTGCTACG 62.691 66.667 0.00 0.00 39.83 3.51
2522 2746 4.692475 GGCCGTGGGTTGCTACGT 62.692 66.667 0.00 0.00 38.56 3.57
2523 2747 3.116531 GCCGTGGGTTGCTACGTC 61.117 66.667 0.00 0.00 38.56 4.34
2524 2748 2.340809 CCGTGGGTTGCTACGTCA 59.659 61.111 0.00 0.00 38.56 4.35
2525 2749 1.079405 CCGTGGGTTGCTACGTCAT 60.079 57.895 0.00 0.00 38.56 3.06
2526 2750 1.358725 CCGTGGGTTGCTACGTCATG 61.359 60.000 0.00 0.00 38.56 3.07
2527 2751 1.358725 CGTGGGTTGCTACGTCATGG 61.359 60.000 0.00 0.00 35.70 3.66
2528 2752 1.376683 TGGGTTGCTACGTCATGGC 60.377 57.895 0.00 0.00 34.76 4.40
2529 2753 2.461110 GGGTTGCTACGTCATGGCG 61.461 63.158 19.93 19.93 37.70 5.69
2530 2754 2.461110 GGTTGCTACGTCATGGCGG 61.461 63.158 25.37 8.22 37.70 6.13
2531 2755 2.817834 TTGCTACGTCATGGCGGC 60.818 61.111 25.37 18.73 37.70 6.53
2532 2756 3.309436 TTGCTACGTCATGGCGGCT 62.309 57.895 25.37 6.34 37.70 5.52
2533 2757 2.962253 GCTACGTCATGGCGGCTC 60.962 66.667 25.37 8.11 35.98 4.70
2534 2758 2.279517 CTACGTCATGGCGGCTCC 60.280 66.667 25.37 0.00 35.98 4.70
2542 2766 2.687200 TGGCGGCTCCACCTATGT 60.687 61.111 11.43 0.00 40.72 2.29
2543 2767 2.203070 GGCGGCTCCACCTATGTG 60.203 66.667 0.00 0.00 42.39 3.21
2544 2768 2.897350 GCGGCTCCACCTATGTGC 60.897 66.667 0.00 0.00 41.35 4.57
2545 2769 2.586079 CGGCTCCACCTATGTGCG 60.586 66.667 0.00 0.00 41.35 5.34
2546 2770 2.203070 GGCTCCACCTATGTGCGG 60.203 66.667 0.00 0.00 41.35 5.69
2547 2771 2.584608 GCTCCACCTATGTGCGGT 59.415 61.111 0.00 0.00 41.35 5.68
2548 2772 1.521681 GCTCCACCTATGTGCGGTC 60.522 63.158 0.00 0.00 41.35 4.79
2549 2773 1.961180 GCTCCACCTATGTGCGGTCT 61.961 60.000 0.00 0.00 41.35 3.85
2550 2774 0.179100 CTCCACCTATGTGCGGTCTG 60.179 60.000 0.00 0.00 41.35 3.51
2551 2775 0.902984 TCCACCTATGTGCGGTCTGT 60.903 55.000 0.00 0.00 41.35 3.41
2552 2776 0.740868 CCACCTATGTGCGGTCTGTG 60.741 60.000 0.00 0.00 41.35 3.66
2553 2777 0.037326 CACCTATGTGCGGTCTGTGT 60.037 55.000 0.00 0.00 35.31 3.72
2554 2778 0.246635 ACCTATGTGCGGTCTGTGTC 59.753 55.000 0.00 0.00 0.00 3.67
2555 2779 0.532573 CCTATGTGCGGTCTGTGTCT 59.467 55.000 0.00 0.00 0.00 3.41
2556 2780 1.633561 CTATGTGCGGTCTGTGTCTG 58.366 55.000 0.00 0.00 0.00 3.51
2557 2781 0.966179 TATGTGCGGTCTGTGTCTGT 59.034 50.000 0.00 0.00 0.00 3.41
2558 2782 0.601046 ATGTGCGGTCTGTGTCTGTG 60.601 55.000 0.00 0.00 0.00 3.66
2559 2783 1.227263 GTGCGGTCTGTGTCTGTGT 60.227 57.895 0.00 0.00 0.00 3.72
2560 2784 1.067416 TGCGGTCTGTGTCTGTGTC 59.933 57.895 0.00 0.00 0.00 3.67
2561 2785 1.364171 GCGGTCTGTGTCTGTGTCT 59.636 57.895 0.00 0.00 0.00 3.41
2562 2786 0.941463 GCGGTCTGTGTCTGTGTCTG 60.941 60.000 0.00 0.00 0.00 3.51
2563 2787 0.319040 CGGTCTGTGTCTGTGTCTGG 60.319 60.000 0.00 0.00 0.00 3.86
2564 2788 0.753262 GGTCTGTGTCTGTGTCTGGT 59.247 55.000 0.00 0.00 0.00 4.00
2565 2789 1.139058 GGTCTGTGTCTGTGTCTGGTT 59.861 52.381 0.00 0.00 0.00 3.67
2566 2790 2.474816 GTCTGTGTCTGTGTCTGGTTC 58.525 52.381 0.00 0.00 0.00 3.62
2567 2791 1.067060 TCTGTGTCTGTGTCTGGTTCG 59.933 52.381 0.00 0.00 0.00 3.95
2568 2792 0.104120 TGTGTCTGTGTCTGGTTCGG 59.896 55.000 0.00 0.00 0.00 4.30
2569 2793 1.069090 TGTCTGTGTCTGGTTCGGC 59.931 57.895 0.00 0.00 0.00 5.54
2570 2794 2.022129 GTCTGTGTCTGGTTCGGCG 61.022 63.158 0.00 0.00 0.00 6.46
2571 2795 2.197605 TCTGTGTCTGGTTCGGCGA 61.198 57.895 4.99 4.99 0.00 5.54
2572 2796 2.022129 CTGTGTCTGGTTCGGCGAC 61.022 63.158 10.16 4.88 0.00 5.19
2573 2797 2.737376 GTGTCTGGTTCGGCGACC 60.737 66.667 10.16 15.16 40.23 4.79
2574 2798 2.915659 TGTCTGGTTCGGCGACCT 60.916 61.111 22.60 0.00 40.47 3.85
2575 2799 2.432628 GTCTGGTTCGGCGACCTG 60.433 66.667 22.60 21.64 40.47 4.00
2576 2800 2.915659 TCTGGTTCGGCGACCTGT 60.916 61.111 22.60 0.00 40.47 4.00
2577 2801 2.030562 CTGGTTCGGCGACCTGTT 59.969 61.111 22.60 0.00 40.47 3.16
2578 2802 1.597027 CTGGTTCGGCGACCTGTTT 60.597 57.895 22.60 0.00 40.47 2.83
2579 2803 1.153127 TGGTTCGGCGACCTGTTTT 60.153 52.632 22.60 0.00 40.47 2.43
2580 2804 1.161563 TGGTTCGGCGACCTGTTTTC 61.162 55.000 22.60 0.58 40.47 2.29
2581 2805 1.572941 GTTCGGCGACCTGTTTTCC 59.427 57.895 10.16 0.00 0.00 3.13
2582 2806 0.883370 GTTCGGCGACCTGTTTTCCT 60.883 55.000 10.16 0.00 0.00 3.36
2583 2807 0.882927 TTCGGCGACCTGTTTTCCTG 60.883 55.000 10.16 0.00 0.00 3.86
2584 2808 2.954611 GGCGACCTGTTTTCCTGC 59.045 61.111 0.00 0.00 0.00 4.85
2585 2809 2.626780 GGCGACCTGTTTTCCTGCC 61.627 63.158 0.00 0.00 0.00 4.85
2586 2810 1.896660 GCGACCTGTTTTCCTGCCA 60.897 57.895 0.00 0.00 0.00 4.92
2587 2811 1.452145 GCGACCTGTTTTCCTGCCAA 61.452 55.000 0.00 0.00 0.00 4.52
2588 2812 1.247567 CGACCTGTTTTCCTGCCAAT 58.752 50.000 0.00 0.00 0.00 3.16
2589 2813 1.068333 CGACCTGTTTTCCTGCCAATG 60.068 52.381 0.00 0.00 0.00 2.82
2590 2814 1.273327 GACCTGTTTTCCTGCCAATGG 59.727 52.381 0.00 0.00 0.00 3.16
2591 2815 1.341080 CCTGTTTTCCTGCCAATGGT 58.659 50.000 0.00 0.00 0.00 3.55
2592 2816 2.158385 ACCTGTTTTCCTGCCAATGGTA 60.158 45.455 0.00 0.00 0.00 3.25
2593 2817 2.493278 CCTGTTTTCCTGCCAATGGTAG 59.507 50.000 10.59 10.59 35.17 3.18
2594 2818 3.157087 CTGTTTTCCTGCCAATGGTAGT 58.843 45.455 16.03 0.00 33.52 2.73
2595 2819 2.890311 TGTTTTCCTGCCAATGGTAGTG 59.110 45.455 16.03 7.89 33.52 2.74
2596 2820 2.214376 TTTCCTGCCAATGGTAGTGG 57.786 50.000 16.03 3.01 39.33 4.00
2597 2821 1.367346 TTCCTGCCAATGGTAGTGGA 58.633 50.000 16.03 5.48 38.54 4.02
2598 2822 1.595311 TCCTGCCAATGGTAGTGGAT 58.405 50.000 16.03 0.00 38.54 3.41
2599 2823 1.490490 TCCTGCCAATGGTAGTGGATC 59.510 52.381 16.03 0.00 38.54 3.36
2600 2824 1.212688 CCTGCCAATGGTAGTGGATCA 59.787 52.381 16.03 0.00 38.54 2.92
2601 2825 2.569059 CTGCCAATGGTAGTGGATCAG 58.431 52.381 9.33 0.00 38.54 2.90
2602 2826 1.915489 TGCCAATGGTAGTGGATCAGT 59.085 47.619 0.00 0.00 38.54 3.41
2603 2827 2.092968 TGCCAATGGTAGTGGATCAGTC 60.093 50.000 0.00 0.00 38.54 3.51
2604 2828 2.171448 GCCAATGGTAGTGGATCAGTCT 59.829 50.000 0.00 0.00 38.54 3.24
2605 2829 3.370953 GCCAATGGTAGTGGATCAGTCTT 60.371 47.826 0.00 0.00 38.54 3.01
2606 2830 4.194640 CCAATGGTAGTGGATCAGTCTTG 58.805 47.826 0.00 0.00 38.54 3.02
2607 2831 4.194640 CAATGGTAGTGGATCAGTCTTGG 58.805 47.826 0.00 0.00 0.00 3.61
2608 2832 3.184382 TGGTAGTGGATCAGTCTTGGA 57.816 47.619 0.00 0.00 0.00 3.53
2609 2833 3.724478 TGGTAGTGGATCAGTCTTGGAT 58.276 45.455 0.00 0.00 0.00 3.41
2610 2834 3.452264 TGGTAGTGGATCAGTCTTGGATG 59.548 47.826 0.00 0.00 0.00 3.51
2611 2835 2.706339 AGTGGATCAGTCTTGGATGC 57.294 50.000 0.00 0.00 34.14 3.91
2612 2836 1.211457 AGTGGATCAGTCTTGGATGCC 59.789 52.381 0.00 0.00 32.75 4.40
2613 2837 0.178767 TGGATCAGTCTTGGATGCCG 59.821 55.000 0.00 0.00 32.75 5.69
2614 2838 0.533755 GGATCAGTCTTGGATGCCGG 60.534 60.000 0.00 0.00 0.00 6.13
2615 2839 0.533755 GATCAGTCTTGGATGCCGGG 60.534 60.000 2.18 0.00 0.00 5.73
2616 2840 1.987807 ATCAGTCTTGGATGCCGGGG 61.988 60.000 2.18 0.00 0.00 5.73
2617 2841 4.115199 AGTCTTGGATGCCGGGGC 62.115 66.667 2.18 1.86 42.35 5.80
2640 2864 4.573210 CCATGGATGGTCAGGCTG 57.427 61.111 5.56 8.58 43.05 4.85
2641 2865 1.826921 CCATGGATGGTCAGGCTGC 60.827 63.158 5.56 4.94 43.05 5.25
2642 2866 1.077285 CATGGATGGTCAGGCTGCA 60.077 57.895 10.34 3.09 0.00 4.41
2643 2867 1.077212 ATGGATGGTCAGGCTGCAC 60.077 57.895 10.34 8.97 0.00 4.57
2644 2868 1.569030 ATGGATGGTCAGGCTGCACT 61.569 55.000 10.34 0.00 0.00 4.40
2645 2869 1.748122 GGATGGTCAGGCTGCACTG 60.748 63.158 10.34 6.88 39.84 3.66
2646 2870 1.748122 GATGGTCAGGCTGCACTGG 60.748 63.158 10.34 0.00 38.98 4.00
2647 2871 2.475371 GATGGTCAGGCTGCACTGGT 62.475 60.000 10.34 0.37 38.98 4.00
2648 2872 2.670934 GGTCAGGCTGCACTGGTG 60.671 66.667 10.34 0.00 38.98 4.17
2649 2873 2.670934 GTCAGGCTGCACTGGTGG 60.671 66.667 10.34 0.00 38.98 4.61
2650 2874 4.648626 TCAGGCTGCACTGGTGGC 62.649 66.667 10.34 0.00 38.98 5.01
2651 2875 4.655647 CAGGCTGCACTGGTGGCT 62.656 66.667 0.00 0.00 34.84 4.75
2652 2876 2.930019 AGGCTGCACTGGTGGCTA 60.930 61.111 0.50 0.00 34.81 3.93
2653 2877 2.437359 GGCTGCACTGGTGGCTAG 60.437 66.667 0.50 0.00 0.00 3.42
2654 2878 2.348998 GCTGCACTGGTGGCTAGT 59.651 61.111 0.00 0.00 0.00 2.57
2655 2879 1.302832 GCTGCACTGGTGGCTAGTT 60.303 57.895 0.00 0.00 0.00 2.24
2656 2880 1.580845 GCTGCACTGGTGGCTAGTTG 61.581 60.000 0.00 0.00 0.00 3.16
2657 2881 0.957395 CTGCACTGGTGGCTAGTTGG 60.957 60.000 2.84 0.00 0.00 3.77
2658 2882 2.335712 GCACTGGTGGCTAGTTGGC 61.336 63.158 2.84 0.00 42.18 4.52
2664 2888 2.756400 TGGCTAGTTGGCAGGTGG 59.244 61.111 0.00 0.00 46.76 4.61
2665 2889 1.845664 TGGCTAGTTGGCAGGTGGA 60.846 57.895 0.00 0.00 46.76 4.02
2666 2890 1.078143 GGCTAGTTGGCAGGTGGAG 60.078 63.158 0.00 0.00 41.37 3.86
2667 2891 1.679898 GCTAGTTGGCAGGTGGAGT 59.320 57.895 0.00 0.00 0.00 3.85
2668 2892 0.036875 GCTAGTTGGCAGGTGGAGTT 59.963 55.000 0.00 0.00 0.00 3.01
2669 2893 1.813513 CTAGTTGGCAGGTGGAGTTG 58.186 55.000 0.00 0.00 0.00 3.16
2670 2894 1.072331 CTAGTTGGCAGGTGGAGTTGT 59.928 52.381 0.00 0.00 0.00 3.32
2671 2895 1.136828 AGTTGGCAGGTGGAGTTGTA 58.863 50.000 0.00 0.00 0.00 2.41
2672 2896 1.072331 AGTTGGCAGGTGGAGTTGTAG 59.928 52.381 0.00 0.00 0.00 2.74
2673 2897 0.250727 TTGGCAGGTGGAGTTGTAGC 60.251 55.000 0.00 0.00 0.00 3.58
2674 2898 1.374947 GGCAGGTGGAGTTGTAGCA 59.625 57.895 0.00 0.00 0.00 3.49
2675 2899 0.674895 GGCAGGTGGAGTTGTAGCAG 60.675 60.000 0.00 0.00 0.00 4.24
2676 2900 0.035458 GCAGGTGGAGTTGTAGCAGT 59.965 55.000 0.00 0.00 0.00 4.40
2677 2901 1.543429 GCAGGTGGAGTTGTAGCAGTT 60.543 52.381 0.00 0.00 0.00 3.16
2678 2902 2.146342 CAGGTGGAGTTGTAGCAGTTG 58.854 52.381 0.00 0.00 0.00 3.16
2679 2903 1.768870 AGGTGGAGTTGTAGCAGTTGT 59.231 47.619 0.00 0.00 0.00 3.32
2680 2904 2.172717 AGGTGGAGTTGTAGCAGTTGTT 59.827 45.455 0.00 0.00 0.00 2.83
2681 2905 2.290641 GGTGGAGTTGTAGCAGTTGTTG 59.709 50.000 0.00 0.00 0.00 3.33
2682 2906 2.290641 GTGGAGTTGTAGCAGTTGTTGG 59.709 50.000 0.00 0.00 0.00 3.77
2683 2907 1.266989 GGAGTTGTAGCAGTTGTTGGC 59.733 52.381 0.00 0.00 0.00 4.52
2684 2908 0.944386 AGTTGTAGCAGTTGTTGGCG 59.056 50.000 0.00 0.00 34.54 5.69
2685 2909 0.040425 GTTGTAGCAGTTGTTGGCGG 60.040 55.000 0.00 0.00 34.54 6.13
2686 2910 0.464735 TTGTAGCAGTTGTTGGCGGT 60.465 50.000 0.00 0.00 34.54 5.68
2687 2911 1.163420 TGTAGCAGTTGTTGGCGGTG 61.163 55.000 0.00 0.00 34.54 4.94
2688 2912 1.147376 TAGCAGTTGTTGGCGGTGT 59.853 52.632 0.00 0.00 34.54 4.16
2689 2913 1.163420 TAGCAGTTGTTGGCGGTGTG 61.163 55.000 0.00 0.00 34.54 3.82
2690 2914 2.026014 CAGTTGTTGGCGGTGTGC 59.974 61.111 0.00 0.00 45.38 4.57
2691 2915 2.124320 AGTTGTTGGCGGTGTGCT 60.124 55.556 0.00 0.00 45.43 4.40
2692 2916 1.752694 AGTTGTTGGCGGTGTGCTT 60.753 52.632 0.00 0.00 45.43 3.91
2693 2917 1.299089 GTTGTTGGCGGTGTGCTTC 60.299 57.895 0.00 0.00 45.43 3.86
2694 2918 1.750780 TTGTTGGCGGTGTGCTTCA 60.751 52.632 0.00 0.00 45.43 3.02
2695 2919 1.723608 TTGTTGGCGGTGTGCTTCAG 61.724 55.000 0.00 0.00 45.43 3.02
2696 2920 1.891919 GTTGGCGGTGTGCTTCAGA 60.892 57.895 0.00 0.00 45.43 3.27
2697 2921 1.891919 TTGGCGGTGTGCTTCAGAC 60.892 57.895 0.00 0.00 45.43 3.51
2698 2922 2.280797 GGCGGTGTGCTTCAGACA 60.281 61.111 0.00 0.00 45.43 3.41
2699 2923 1.672356 GGCGGTGTGCTTCAGACAT 60.672 57.895 0.00 0.00 45.43 3.06
2700 2924 1.499056 GCGGTGTGCTTCAGACATG 59.501 57.895 0.00 0.00 41.73 3.21
2701 2925 1.915614 GCGGTGTGCTTCAGACATGG 61.916 60.000 0.00 0.00 41.73 3.66
2702 2926 0.320683 CGGTGTGCTTCAGACATGGA 60.321 55.000 0.00 0.00 28.70 3.41
2703 2927 1.446907 GGTGTGCTTCAGACATGGAG 58.553 55.000 0.00 0.00 34.82 3.86
2704 2928 1.446907 GTGTGCTTCAGACATGGAGG 58.553 55.000 0.00 0.00 31.96 4.30
2705 2929 0.321919 TGTGCTTCAGACATGGAGGC 60.322 55.000 0.00 0.00 37.82 4.70
2706 2930 1.078918 TGCTTCAGACATGGAGGCG 60.079 57.895 0.00 0.00 39.93 5.52
2707 2931 1.817099 GCTTCAGACATGGAGGCGG 60.817 63.158 0.00 0.00 31.96 6.13
2708 2932 1.817099 CTTCAGACATGGAGGCGGC 60.817 63.158 0.00 0.00 0.00 6.53
2709 2933 3.664025 TTCAGACATGGAGGCGGCG 62.664 63.158 0.51 0.51 0.00 6.46
2710 2934 4.147449 CAGACATGGAGGCGGCGA 62.147 66.667 12.98 0.00 0.00 5.54
2711 2935 3.842923 AGACATGGAGGCGGCGAG 61.843 66.667 12.98 0.00 0.00 5.03
2712 2936 4.148825 GACATGGAGGCGGCGAGT 62.149 66.667 12.98 0.00 0.00 4.18
2713 2937 4.457496 ACATGGAGGCGGCGAGTG 62.457 66.667 12.98 4.24 0.00 3.51
2714 2938 4.457496 CATGGAGGCGGCGAGTGT 62.457 66.667 12.98 0.00 0.00 3.55
2715 2939 3.706373 ATGGAGGCGGCGAGTGTT 61.706 61.111 12.98 0.00 0.00 3.32
2716 2940 3.665675 ATGGAGGCGGCGAGTGTTC 62.666 63.158 12.98 0.00 0.00 3.18
2718 2942 4.070552 GAGGCGGCGAGTGTTCCT 62.071 66.667 12.98 6.05 0.00 3.36
2719 2943 4.379243 AGGCGGCGAGTGTTCCTG 62.379 66.667 12.98 0.00 0.00 3.86
2721 2945 4.681978 GCGGCGAGTGTTCCTGGT 62.682 66.667 12.98 0.00 0.00 4.00
2722 2946 2.738521 CGGCGAGTGTTCCTGGTG 60.739 66.667 0.00 0.00 0.00 4.17
2723 2947 2.741092 GGCGAGTGTTCCTGGTGA 59.259 61.111 0.00 0.00 0.00 4.02
2724 2948 1.070786 GGCGAGTGTTCCTGGTGAA 59.929 57.895 0.00 0.00 0.00 3.18
2725 2949 0.951040 GGCGAGTGTTCCTGGTGAAG 60.951 60.000 0.00 0.00 32.37 3.02
2726 2950 0.249911 GCGAGTGTTCCTGGTGAAGT 60.250 55.000 0.00 0.00 32.37 3.01
2727 2951 1.810412 GCGAGTGTTCCTGGTGAAGTT 60.810 52.381 0.00 0.00 32.37 2.66
2728 2952 1.867233 CGAGTGTTCCTGGTGAAGTTG 59.133 52.381 0.00 0.00 32.37 3.16
2729 2953 2.741878 CGAGTGTTCCTGGTGAAGTTGT 60.742 50.000 0.00 0.00 32.37 3.32
2730 2954 2.614057 GAGTGTTCCTGGTGAAGTTGTG 59.386 50.000 0.00 0.00 32.37 3.33
2731 2955 1.065551 GTGTTCCTGGTGAAGTTGTGC 59.934 52.381 0.00 0.00 32.37 4.57
2732 2956 1.064758 TGTTCCTGGTGAAGTTGTGCT 60.065 47.619 0.00 0.00 32.37 4.40
2733 2957 1.604278 GTTCCTGGTGAAGTTGTGCTC 59.396 52.381 0.00 0.00 32.37 4.26
2734 2958 0.249868 TCCTGGTGAAGTTGTGCTCG 60.250 55.000 0.00 0.00 0.00 5.03
2735 2959 1.230635 CCTGGTGAAGTTGTGCTCGG 61.231 60.000 0.00 0.00 0.00 4.63
2736 2960 1.845809 CTGGTGAAGTTGTGCTCGGC 61.846 60.000 0.00 0.00 0.00 5.54
2737 2961 2.551270 GTGAAGTTGTGCTCGGCG 59.449 61.111 0.00 0.00 0.00 6.46
2738 2962 2.664851 TGAAGTTGTGCTCGGCGG 60.665 61.111 7.21 0.00 0.00 6.13
2739 2963 4.090057 GAAGTTGTGCTCGGCGGC 62.090 66.667 7.21 10.42 0.00 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.032815 TCAACACGCTGTCCGAATCA 59.967 50.000 0.00 0.00 41.02 2.57
13 14 4.363999 GAGCATATAGAGTTCAACACGCT 58.636 43.478 0.00 0.00 39.23 5.07
79 80 0.385473 GTGCTTTTTAGCTCGCGCAA 60.385 50.000 8.75 0.00 39.10 4.85
80 81 1.206578 GTGCTTTTTAGCTCGCGCA 59.793 52.632 8.75 0.00 39.10 6.09
141 142 2.607282 CCGAAGTCGTTGTGCTAAGAGT 60.607 50.000 0.00 0.00 37.74 3.24
144 145 0.438830 GCCGAAGTCGTTGTGCTAAG 59.561 55.000 0.00 0.00 37.74 2.18
151 152 2.430921 AGCGAGCCGAAGTCGTTG 60.431 61.111 0.00 0.00 39.69 4.10
154 155 0.029567 ATTAGAGCGAGCCGAAGTCG 59.970 55.000 0.00 0.00 40.50 4.18
172 173 6.054860 AGACCTAGCAATGACTACAAACAT 57.945 37.500 0.00 0.00 0.00 2.71
295 296 7.411912 CGAACGAACACTATTCATCATTTGTCT 60.412 37.037 0.00 0.00 0.00 3.41
314 315 2.151881 TTCCGAAATCACCGAACGAA 57.848 45.000 0.00 0.00 0.00 3.85
322 323 6.771188 ATTACATCGAGATTCCGAAATCAC 57.229 37.500 0.00 0.00 43.21 3.06
455 457 1.923204 GAGCATCACACGCTAGTTGAG 59.077 52.381 0.96 0.00 40.63 3.02
463 465 2.740714 GAACGGGAGCATCACACGC 61.741 63.158 0.00 0.00 39.81 5.34
506 600 3.865011 TGACAAAAAGCAGCTTGACAA 57.135 38.095 8.88 0.00 0.00 3.18
507 601 3.772932 CTTGACAAAAAGCAGCTTGACA 58.227 40.909 8.88 0.71 0.00 3.58
517 611 3.441496 TTCCAGCAGCTTGACAAAAAG 57.559 42.857 0.00 0.00 0.00 2.27
518 612 3.883830 TTTCCAGCAGCTTGACAAAAA 57.116 38.095 0.00 0.00 0.00 1.94
519 613 5.528043 TTATTTCCAGCAGCTTGACAAAA 57.472 34.783 0.00 0.00 0.00 2.44
520 614 5.163468 TGTTTATTTCCAGCAGCTTGACAAA 60.163 36.000 0.00 0.00 0.00 2.83
636 731 2.031163 AAGTCAGAGGTGGCGTGC 59.969 61.111 0.00 0.00 31.53 5.34
641 736 0.671781 CGAAGGCAAGTCAGAGGTGG 60.672 60.000 0.00 0.00 0.00 4.61
673 768 0.252239 AAGGGGATTTGCTGGGGAAC 60.252 55.000 0.00 0.00 0.00 3.62
674 769 0.041090 GAAGGGGATTTGCTGGGGAA 59.959 55.000 0.00 0.00 0.00 3.97
675 770 0.850883 AGAAGGGGATTTGCTGGGGA 60.851 55.000 0.00 0.00 0.00 4.81
676 771 0.396278 GAGAAGGGGATTTGCTGGGG 60.396 60.000 0.00 0.00 0.00 4.96
677 772 0.396278 GGAGAAGGGGATTTGCTGGG 60.396 60.000 0.00 0.00 0.00 4.45
678 773 0.627986 AGGAGAAGGGGATTTGCTGG 59.372 55.000 0.00 0.00 0.00 4.85
679 774 1.760192 CAGGAGAAGGGGATTTGCTG 58.240 55.000 0.00 0.00 0.00 4.41
680 775 0.033699 GCAGGAGAAGGGGATTTGCT 60.034 55.000 0.00 0.00 0.00 3.91
681 776 0.033699 AGCAGGAGAAGGGGATTTGC 60.034 55.000 0.00 0.00 0.00 3.68
682 777 1.283029 TGAGCAGGAGAAGGGGATTTG 59.717 52.381 0.00 0.00 0.00 2.32
683 778 1.563410 CTGAGCAGGAGAAGGGGATTT 59.437 52.381 0.00 0.00 0.00 2.17
684 779 1.211456 CTGAGCAGGAGAAGGGGATT 58.789 55.000 0.00 0.00 0.00 3.01
685 780 2.928002 CTGAGCAGGAGAAGGGGAT 58.072 57.895 0.00 0.00 0.00 3.85
686 781 4.468829 CTGAGCAGGAGAAGGGGA 57.531 61.111 0.00 0.00 0.00 4.81
696 791 2.190488 GAGGGTGGGTTCCTGAGCAG 62.190 65.000 0.00 0.00 34.21 4.24
697 792 2.121963 AGGGTGGGTTCCTGAGCA 60.122 61.111 0.00 0.00 32.53 4.26
698 793 2.671682 GAGGGTGGGTTCCTGAGC 59.328 66.667 0.00 0.00 34.21 4.26
699 794 2.660064 CCGAGGGTGGGTTCCTGAG 61.660 68.421 0.00 0.00 34.21 3.35
700 795 2.606519 CCGAGGGTGGGTTCCTGA 60.607 66.667 0.00 0.00 34.21 3.86
701 796 3.717294 CCCGAGGGTGGGTTCCTG 61.717 72.222 0.00 0.00 44.76 3.86
722 817 3.484547 GTGAACCTTACCGGCGCG 61.485 66.667 0.00 0.00 35.61 6.86
723 818 3.122971 GGTGAACCTTACCGGCGC 61.123 66.667 0.00 0.00 35.61 6.53
728 823 1.648504 CGATTCCGGTGAACCTTACC 58.351 55.000 0.00 0.00 32.13 2.85
729 824 1.004595 GCGATTCCGGTGAACCTTAC 58.995 55.000 0.00 0.00 36.06 2.34
730 825 0.108041 GGCGATTCCGGTGAACCTTA 60.108 55.000 0.00 0.00 36.06 2.69
731 826 1.376812 GGCGATTCCGGTGAACCTT 60.377 57.895 0.00 0.00 36.06 3.50
732 827 2.267961 GGCGATTCCGGTGAACCT 59.732 61.111 0.00 0.00 36.06 3.50
741 836 0.108041 TGAACCTTACCGGCGATTCC 60.108 55.000 9.30 0.00 35.61 3.01
742 837 1.004595 GTGAACCTTACCGGCGATTC 58.995 55.000 9.30 0.00 35.61 2.52
743 838 0.392060 GGTGAACCTTACCGGCGATT 60.392 55.000 9.30 0.00 35.61 3.34
744 839 1.219935 GGTGAACCTTACCGGCGAT 59.780 57.895 9.30 0.00 35.61 4.58
745 840 2.658422 GGTGAACCTTACCGGCGA 59.342 61.111 9.30 0.00 35.61 5.54
750 845 1.648504 CGATTCCGGTGAACCTTACC 58.351 55.000 0.00 0.00 32.13 2.85
751 846 1.004595 GCGATTCCGGTGAACCTTAC 58.995 55.000 0.00 0.00 36.06 2.34
752 847 0.108041 GGCGATTCCGGTGAACCTTA 60.108 55.000 0.00 0.00 36.06 2.69
753 848 1.376812 GGCGATTCCGGTGAACCTT 60.377 57.895 0.00 0.00 36.06 3.50
754 849 2.267961 GGCGATTCCGGTGAACCT 59.732 61.111 0.00 0.00 36.06 3.50
763 858 2.108362 CCCAGTACCGGCGATTCC 59.892 66.667 9.30 0.00 0.00 3.01
764 859 2.588034 GCCCAGTACCGGCGATTC 60.588 66.667 9.30 0.00 36.47 2.52
923 1026 0.944311 CGATTGCCTTACGGATCGGG 60.944 60.000 5.18 0.00 0.00 5.14
1038 1142 2.436646 CGGGCTCGGCAACAAGAT 60.437 61.111 0.00 0.00 0.00 2.40
1056 1160 5.070446 CAGTAGGCTAAGAGAGAGAGAGAGA 59.930 48.000 0.00 0.00 0.00 3.10
1057 1161 5.300752 CAGTAGGCTAAGAGAGAGAGAGAG 58.699 50.000 0.00 0.00 0.00 3.20
1175 1307 4.049186 CGTATACCTCGTTCCAGGAATTG 58.951 47.826 4.80 1.42 36.96 2.32
1193 1325 1.819305 GCCTTGCATCCAATCCCGTAT 60.819 52.381 0.00 0.00 0.00 3.06
1231 1363 5.220381 GTCTGTAACATGTCGAGTTCTTGA 58.780 41.667 0.00 0.00 0.00 3.02
1249 1381 1.539065 CGAGCCTCTTGTTGTGTCTGT 60.539 52.381 0.00 0.00 0.00 3.41
1254 1386 1.572085 CTGCCGAGCCTCTTGTTGTG 61.572 60.000 0.00 0.00 0.00 3.33
1436 1580 0.106149 GTGACCTTGTCGTCCACCTT 59.894 55.000 0.00 0.00 34.95 3.50
1509 1653 4.687215 GGCAGACGCAGCTGACCA 62.687 66.667 20.43 0.00 37.99 4.02
1601 1765 3.068590 AGTGACACCAGCAGAAAAATTGG 59.931 43.478 0.84 0.00 36.76 3.16
1651 1815 8.668510 TGAGGACTGAATAGCTGATAAATTTC 57.331 34.615 0.00 0.00 0.00 2.17
1730 1894 2.315176 AGCAGATCAGGATACGCTCTT 58.685 47.619 0.00 0.00 46.39 2.85
1771 1993 1.134401 ACAGAGAGCGAGAGAGAGAGG 60.134 57.143 0.00 0.00 0.00 3.69
1772 1994 2.315925 ACAGAGAGCGAGAGAGAGAG 57.684 55.000 0.00 0.00 0.00 3.20
1773 1995 2.779755 AACAGAGAGCGAGAGAGAGA 57.220 50.000 0.00 0.00 0.00 3.10
1774 1996 3.427503 GGAAAACAGAGAGCGAGAGAGAG 60.428 52.174 0.00 0.00 0.00 3.20
1775 1997 2.490115 GGAAAACAGAGAGCGAGAGAGA 59.510 50.000 0.00 0.00 0.00 3.10
1776 1998 2.491693 AGGAAAACAGAGAGCGAGAGAG 59.508 50.000 0.00 0.00 0.00 3.20
1777 1999 2.520069 AGGAAAACAGAGAGCGAGAGA 58.480 47.619 0.00 0.00 0.00 3.10
1778 2000 3.311486 AAGGAAAACAGAGAGCGAGAG 57.689 47.619 0.00 0.00 0.00 3.20
1779 2001 3.069586 TCAAAGGAAAACAGAGAGCGAGA 59.930 43.478 0.00 0.00 0.00 4.04
1780 2002 3.393800 TCAAAGGAAAACAGAGAGCGAG 58.606 45.455 0.00 0.00 0.00 5.03
1783 2005 6.560253 TTACATCAAAGGAAAACAGAGAGC 57.440 37.500 0.00 0.00 0.00 4.09
1795 2017 9.994432 GAGACATGAATAGTTTTACATCAAAGG 57.006 33.333 0.00 0.00 0.00 3.11
1812 2034 5.752036 ACATTCTTCTCTGGAGACATGAA 57.248 39.130 0.00 12.61 41.51 2.57
1814 2036 7.605691 AGTTAAACATTCTTCTCTGGAGACATG 59.394 37.037 0.00 6.08 41.51 3.21
1940 2163 5.042463 TCAACACCAAGGAATACAGTCAA 57.958 39.130 0.00 0.00 0.00 3.18
2046 2269 9.682465 GTATTTTTCTCAGGAATAAGTACCCTT 57.318 33.333 0.00 0.00 34.56 3.95
2088 2312 8.981647 CATTGTTTCAGTTTCTATTTTTCCAGG 58.018 33.333 0.00 0.00 0.00 4.45
2100 2324 8.663911 CCTCTTCTAGATCATTGTTTCAGTTTC 58.336 37.037 0.00 0.00 0.00 2.78
2151 2375 1.883926 ACCACGGTTATTGTTTGGAGC 59.116 47.619 0.00 0.00 0.00 4.70
2167 2391 2.613977 CCCATCAGAGTCTGAACACCAC 60.614 54.545 26.06 0.00 44.04 4.16
2195 2419 7.050377 CACCATCAGAGATAACAGTAAACCAT 58.950 38.462 0.00 0.00 0.00 3.55
2265 2489 1.273327 CAAGCCCAACCACCTGATTTC 59.727 52.381 0.00 0.00 0.00 2.17
2268 2492 1.077265 CCAAGCCCAACCACCTGAT 59.923 57.895 0.00 0.00 0.00 2.90
2269 2493 2.520458 CCAAGCCCAACCACCTGA 59.480 61.111 0.00 0.00 0.00 3.86
2270 2494 3.305516 GCCAAGCCCAACCACCTG 61.306 66.667 0.00 0.00 0.00 4.00
2271 2495 2.887738 TTTGCCAAGCCCAACCACCT 62.888 55.000 0.00 0.00 0.00 4.00
2272 2496 2.381838 CTTTGCCAAGCCCAACCACC 62.382 60.000 0.00 0.00 0.00 4.61
2273 2497 1.069596 CTTTGCCAAGCCCAACCAC 59.930 57.895 0.00 0.00 0.00 4.16
2274 2498 2.139484 CCTTTGCCAAGCCCAACCA 61.139 57.895 0.00 0.00 0.00 3.67
2275 2499 2.743060 CCTTTGCCAAGCCCAACC 59.257 61.111 0.00 0.00 0.00 3.77
2276 2500 2.031012 GCCTTTGCCAAGCCCAAC 59.969 61.111 0.00 0.00 0.00 3.77
2317 2541 4.148825 CCGGTTCAGCCCTCGAGG 62.149 72.222 25.36 25.36 39.47 4.63
2318 2542 1.961180 AATCCGGTTCAGCCCTCGAG 61.961 60.000 5.13 5.13 0.00 4.04
2319 2543 1.956629 GAATCCGGTTCAGCCCTCGA 61.957 60.000 0.00 0.00 36.80 4.04
2320 2544 1.521681 GAATCCGGTTCAGCCCTCG 60.522 63.158 0.00 0.00 36.80 4.63
2321 2545 1.521681 CGAATCCGGTTCAGCCCTC 60.522 63.158 0.00 0.00 36.60 4.30
2322 2546 2.240162 GACGAATCCGGTTCAGCCCT 62.240 60.000 0.00 0.00 40.78 5.19
2323 2547 1.814169 GACGAATCCGGTTCAGCCC 60.814 63.158 0.00 0.00 40.78 5.19
2324 2548 1.814169 GGACGAATCCGGTTCAGCC 60.814 63.158 0.00 5.40 40.78 4.85
2325 2549 3.795638 GGACGAATCCGGTTCAGC 58.204 61.111 0.00 0.00 40.78 4.26
2339 2563 1.303317 ACCAAAGCATCCACGGGAC 60.303 57.895 0.00 0.00 32.98 4.46
2340 2564 1.303236 CACCAAAGCATCCACGGGA 60.303 57.895 0.00 0.00 35.55 5.14
2341 2565 1.586154 GACACCAAAGCATCCACGGG 61.586 60.000 0.00 0.00 0.00 5.28
2342 2566 0.606401 AGACACCAAAGCATCCACGG 60.606 55.000 0.00 0.00 0.00 4.94
2343 2567 1.197721 GAAGACACCAAAGCATCCACG 59.802 52.381 0.00 0.00 0.00 4.94
2344 2568 1.197721 CGAAGACACCAAAGCATCCAC 59.802 52.381 0.00 0.00 0.00 4.02
2345 2569 1.522668 CGAAGACACCAAAGCATCCA 58.477 50.000 0.00 0.00 0.00 3.41
2346 2570 0.169009 GCGAAGACACCAAAGCATCC 59.831 55.000 0.00 0.00 0.00 3.51
2347 2571 0.179215 CGCGAAGACACCAAAGCATC 60.179 55.000 0.00 0.00 0.00 3.91
2348 2572 0.602638 TCGCGAAGACACCAAAGCAT 60.603 50.000 6.20 0.00 0.00 3.79
2349 2573 1.227409 TCGCGAAGACACCAAAGCA 60.227 52.632 6.20 0.00 0.00 3.91
2350 2574 3.637714 TCGCGAAGACACCAAAGC 58.362 55.556 6.20 0.00 0.00 3.51
2359 2583 1.540267 GCCATAGATAGGTCGCGAAGA 59.460 52.381 12.06 0.00 0.00 2.87
2360 2584 1.542030 AGCCATAGATAGGTCGCGAAG 59.458 52.381 12.06 0.00 0.00 3.79
2361 2585 1.617322 AGCCATAGATAGGTCGCGAA 58.383 50.000 12.06 0.00 0.00 4.70
2362 2586 2.082231 GTAGCCATAGATAGGTCGCGA 58.918 52.381 3.71 3.71 0.00 5.87
2363 2587 1.132643 GGTAGCCATAGATAGGTCGCG 59.867 57.143 0.00 0.00 0.00 5.87
2364 2588 1.477295 GGGTAGCCATAGATAGGTCGC 59.523 57.143 5.96 0.00 0.00 5.19
2365 2589 2.100989 GGGGTAGCCATAGATAGGTCG 58.899 57.143 14.06 0.00 0.00 4.79
2366 2590 3.100671 CTGGGGTAGCCATAGATAGGTC 58.899 54.545 14.06 0.00 0.00 3.85
2367 2591 3.191888 CTGGGGTAGCCATAGATAGGT 57.808 52.381 14.06 0.00 0.00 3.08
2389 2613 4.704833 TGGTCAGCCAGCGCCTTC 62.705 66.667 2.29 0.00 40.46 3.46
2397 2621 0.249120 CTTATCACGGTGGTCAGCCA 59.751 55.000 8.50 0.00 43.73 4.75
2398 2622 1.090052 GCTTATCACGGTGGTCAGCC 61.090 60.000 15.09 0.00 0.00 4.85
2399 2623 0.391130 TGCTTATCACGGTGGTCAGC 60.391 55.000 18.31 18.31 0.00 4.26
2400 2624 1.359848 GTGCTTATCACGGTGGTCAG 58.640 55.000 8.50 3.04 35.76 3.51
2401 2625 0.036765 GGTGCTTATCACGGTGGTCA 60.037 55.000 8.50 0.00 46.56 4.02
2402 2626 0.743345 GGGTGCTTATCACGGTGGTC 60.743 60.000 8.50 0.00 46.56 4.02
2403 2627 1.198759 AGGGTGCTTATCACGGTGGT 61.199 55.000 8.50 3.19 46.56 4.16
2404 2628 0.462047 GAGGGTGCTTATCACGGTGG 60.462 60.000 8.50 0.00 46.56 4.61
2405 2629 0.806102 CGAGGGTGCTTATCACGGTG 60.806 60.000 0.56 0.56 46.56 4.94
2406 2630 0.968901 TCGAGGGTGCTTATCACGGT 60.969 55.000 0.00 0.00 46.56 4.83
2407 2631 0.174845 TTCGAGGGTGCTTATCACGG 59.825 55.000 0.00 0.00 46.56 4.94
2408 2632 1.278238 GTTCGAGGGTGCTTATCACG 58.722 55.000 0.00 0.00 46.56 4.35
2409 2633 2.380084 TGTTCGAGGGTGCTTATCAC 57.620 50.000 0.00 0.00 44.90 3.06
2410 2634 2.301870 AGTTGTTCGAGGGTGCTTATCA 59.698 45.455 0.00 0.00 0.00 2.15
2411 2635 2.973945 AGTTGTTCGAGGGTGCTTATC 58.026 47.619 0.00 0.00 0.00 1.75
2412 2636 3.074412 CAAGTTGTTCGAGGGTGCTTAT 58.926 45.455 0.00 0.00 0.00 1.73
2413 2637 2.103432 TCAAGTTGTTCGAGGGTGCTTA 59.897 45.455 2.11 0.00 0.00 3.09
2414 2638 1.134220 TCAAGTTGTTCGAGGGTGCTT 60.134 47.619 2.11 0.00 0.00 3.91
2415 2639 0.468226 TCAAGTTGTTCGAGGGTGCT 59.532 50.000 2.11 0.00 0.00 4.40
2416 2640 1.464997 GATCAAGTTGTTCGAGGGTGC 59.535 52.381 2.11 0.00 0.00 5.01
2417 2641 2.076863 GGATCAAGTTGTTCGAGGGTG 58.923 52.381 2.11 0.00 0.00 4.61
2418 2642 1.697432 TGGATCAAGTTGTTCGAGGGT 59.303 47.619 2.11 0.00 0.00 4.34
2419 2643 2.350522 CTGGATCAAGTTGTTCGAGGG 58.649 52.381 14.80 0.00 0.00 4.30
2420 2644 1.734465 GCTGGATCAAGTTGTTCGAGG 59.266 52.381 20.77 9.91 0.00 4.63
2421 2645 2.693069 AGCTGGATCAAGTTGTTCGAG 58.307 47.619 17.15 17.15 0.00 4.04
2422 2646 2.839486 AGCTGGATCAAGTTGTTCGA 57.161 45.000 2.11 0.69 0.00 3.71
2423 2647 2.932614 CCTAGCTGGATCAAGTTGTTCG 59.067 50.000 0.00 0.00 38.35 3.95
2424 2648 4.207891 TCCTAGCTGGATCAAGTTGTTC 57.792 45.455 0.00 4.03 40.56 3.18
2425 2649 4.327680 GTTCCTAGCTGGATCAAGTTGTT 58.672 43.478 0.00 0.00 45.68 2.83
2426 2650 3.307762 GGTTCCTAGCTGGATCAAGTTGT 60.308 47.826 0.00 0.00 45.68 3.32
2427 2651 3.274288 GGTTCCTAGCTGGATCAAGTTG 58.726 50.000 0.00 0.00 45.68 3.16
2428 2652 2.093447 CGGTTCCTAGCTGGATCAAGTT 60.093 50.000 0.00 0.00 45.68 2.66
2429 2653 1.482593 CGGTTCCTAGCTGGATCAAGT 59.517 52.381 0.00 0.00 45.68 3.16
2430 2654 1.202580 CCGGTTCCTAGCTGGATCAAG 60.203 57.143 0.00 0.00 45.68 3.02
2431 2655 0.830648 CCGGTTCCTAGCTGGATCAA 59.169 55.000 0.00 0.00 45.68 2.57
2432 2656 0.032515 TCCGGTTCCTAGCTGGATCA 60.033 55.000 0.00 0.00 45.68 2.92
2433 2657 1.069358 CTTCCGGTTCCTAGCTGGATC 59.931 57.143 0.00 1.92 45.68 3.36
2434 2658 1.123928 CTTCCGGTTCCTAGCTGGAT 58.876 55.000 0.00 0.00 45.68 3.41
2435 2659 1.614241 GCTTCCGGTTCCTAGCTGGA 61.614 60.000 0.00 0.00 44.51 3.86
2436 2660 1.153349 GCTTCCGGTTCCTAGCTGG 60.153 63.158 0.00 0.00 37.10 4.85
2437 2661 1.112113 TAGCTTCCGGTTCCTAGCTG 58.888 55.000 19.97 0.00 43.38 4.24
2438 2662 1.689273 CATAGCTTCCGGTTCCTAGCT 59.311 52.381 17.04 17.04 45.32 3.32
2439 2663 1.413077 ACATAGCTTCCGGTTCCTAGC 59.587 52.381 0.00 4.30 0.00 3.42
2440 2664 2.036089 GGACATAGCTTCCGGTTCCTAG 59.964 54.545 0.00 0.00 0.00 3.02
2441 2665 2.037144 GGACATAGCTTCCGGTTCCTA 58.963 52.381 0.00 0.50 0.00 2.94
2442 2666 0.831307 GGACATAGCTTCCGGTTCCT 59.169 55.000 0.00 0.00 0.00 3.36
2443 2667 3.381370 GGACATAGCTTCCGGTTCC 57.619 57.895 0.00 0.00 0.00 3.62
2449 2673 1.699343 GTATCGCGGACATAGCTTCC 58.301 55.000 6.13 0.00 0.00 3.46
2450 2674 1.328439 CGTATCGCGGACATAGCTTC 58.672 55.000 6.13 0.00 36.85 3.86
2451 2675 0.663568 GCGTATCGCGGACATAGCTT 60.664 55.000 6.13 0.00 44.55 3.74
2452 2676 1.081376 GCGTATCGCGGACATAGCT 60.081 57.895 6.13 0.00 44.55 3.32
2453 2677 3.449042 GCGTATCGCGGACATAGC 58.551 61.111 6.13 0.97 44.55 2.97
2463 2687 2.155732 GCAATCCATGTACAGCGTATCG 59.844 50.000 0.33 0.00 0.00 2.92
2464 2688 2.480419 GGCAATCCATGTACAGCGTATC 59.520 50.000 0.33 0.00 0.00 2.24
2465 2689 2.158827 TGGCAATCCATGTACAGCGTAT 60.159 45.455 0.33 0.00 37.47 3.06
2466 2690 1.208293 TGGCAATCCATGTACAGCGTA 59.792 47.619 0.33 0.00 37.47 4.42
2467 2691 0.035534 TGGCAATCCATGTACAGCGT 60.036 50.000 0.33 0.00 37.47 5.07
2468 2692 2.779282 TGGCAATCCATGTACAGCG 58.221 52.632 0.33 0.00 37.47 5.18
2478 2702 1.809207 CCAACACCGATGGCAATCC 59.191 57.895 0.00 0.00 0.00 3.01
2502 2726 4.028490 TAGCAACCCACGGCCAGG 62.028 66.667 2.24 3.38 0.00 4.45
2503 2727 2.746277 GTAGCAACCCACGGCCAG 60.746 66.667 2.24 0.00 0.00 4.85
2504 2728 4.690719 CGTAGCAACCCACGGCCA 62.691 66.667 2.24 0.00 34.57 5.36
2505 2729 4.692475 ACGTAGCAACCCACGGCC 62.692 66.667 0.00 0.00 42.35 6.13
2506 2730 3.116531 GACGTAGCAACCCACGGC 61.117 66.667 0.00 0.00 42.35 5.68
2507 2731 1.079405 ATGACGTAGCAACCCACGG 60.079 57.895 0.00 0.00 42.35 4.94
2508 2732 1.358725 CCATGACGTAGCAACCCACG 61.359 60.000 0.00 0.00 43.63 4.94
2509 2733 1.644786 GCCATGACGTAGCAACCCAC 61.645 60.000 0.00 0.00 0.00 4.61
2510 2734 1.376683 GCCATGACGTAGCAACCCA 60.377 57.895 0.00 0.00 0.00 4.51
2511 2735 2.461110 CGCCATGACGTAGCAACCC 61.461 63.158 0.00 0.00 0.00 4.11
2512 2736 2.461110 CCGCCATGACGTAGCAACC 61.461 63.158 0.00 0.00 0.00 3.77
2513 2737 3.089784 CCGCCATGACGTAGCAAC 58.910 61.111 0.00 0.00 0.00 4.17
2514 2738 2.817834 GCCGCCATGACGTAGCAA 60.818 61.111 0.00 0.00 0.00 3.91
2515 2739 3.716539 GAGCCGCCATGACGTAGCA 62.717 63.158 0.00 0.00 0.00 3.49
2516 2740 2.962253 GAGCCGCCATGACGTAGC 60.962 66.667 0.00 0.00 0.00 3.58
2517 2741 2.279517 GGAGCCGCCATGACGTAG 60.280 66.667 0.00 0.00 36.34 3.51
2518 2742 3.071837 TGGAGCCGCCATGACGTA 61.072 61.111 0.00 0.00 43.33 3.57
2526 2750 2.203070 CACATAGGTGGAGCCGCC 60.203 66.667 11.16 11.16 46.30 6.13
2527 2751 2.897350 GCACATAGGTGGAGCCGC 60.897 66.667 9.91 0.00 45.38 6.53
2528 2752 2.586079 CGCACATAGGTGGAGCCG 60.586 66.667 9.91 0.13 45.38 5.52
2529 2753 2.203070 CCGCACATAGGTGGAGCC 60.203 66.667 9.91 0.00 45.38 4.70
2530 2754 1.521681 GACCGCACATAGGTGGAGC 60.522 63.158 9.91 0.00 45.38 4.70
2531 2755 0.179100 CAGACCGCACATAGGTGGAG 60.179 60.000 9.91 0.00 45.38 3.86
2532 2756 0.902984 ACAGACCGCACATAGGTGGA 60.903 55.000 9.91 0.00 45.38 4.02
2533 2757 0.740868 CACAGACCGCACATAGGTGG 60.741 60.000 9.91 0.00 45.38 4.61
2535 2759 0.246635 GACACAGACCGCACATAGGT 59.753 55.000 0.00 0.00 46.16 3.08
2536 2760 0.532573 AGACACAGACCGCACATAGG 59.467 55.000 0.00 0.00 0.00 2.57
2537 2761 1.067565 ACAGACACAGACCGCACATAG 60.068 52.381 0.00 0.00 0.00 2.23
2538 2762 0.966179 ACAGACACAGACCGCACATA 59.034 50.000 0.00 0.00 0.00 2.29
2539 2763 0.601046 CACAGACACAGACCGCACAT 60.601 55.000 0.00 0.00 0.00 3.21
2540 2764 1.227234 CACAGACACAGACCGCACA 60.227 57.895 0.00 0.00 0.00 4.57
2541 2765 1.215655 GACACAGACACAGACCGCAC 61.216 60.000 0.00 0.00 0.00 5.34
2542 2766 1.067416 GACACAGACACAGACCGCA 59.933 57.895 0.00 0.00 0.00 5.69
2543 2767 0.941463 CAGACACAGACACAGACCGC 60.941 60.000 0.00 0.00 0.00 5.68
2544 2768 0.319040 CCAGACACAGACACAGACCG 60.319 60.000 0.00 0.00 0.00 4.79
2545 2769 0.753262 ACCAGACACAGACACAGACC 59.247 55.000 0.00 0.00 0.00 3.85
2546 2770 2.474816 GAACCAGACACAGACACAGAC 58.525 52.381 0.00 0.00 0.00 3.51
2547 2771 1.067060 CGAACCAGACACAGACACAGA 59.933 52.381 0.00 0.00 0.00 3.41
2548 2772 1.491670 CGAACCAGACACAGACACAG 58.508 55.000 0.00 0.00 0.00 3.66
2549 2773 0.104120 CCGAACCAGACACAGACACA 59.896 55.000 0.00 0.00 0.00 3.72
2550 2774 1.222115 GCCGAACCAGACACAGACAC 61.222 60.000 0.00 0.00 0.00 3.67
2551 2775 1.069090 GCCGAACCAGACACAGACA 59.931 57.895 0.00 0.00 0.00 3.41
2552 2776 2.022129 CGCCGAACCAGACACAGAC 61.022 63.158 0.00 0.00 0.00 3.51
2553 2777 2.197605 TCGCCGAACCAGACACAGA 61.198 57.895 0.00 0.00 0.00 3.41
2554 2778 2.022129 GTCGCCGAACCAGACACAG 61.022 63.158 0.00 0.00 35.19 3.66
2555 2779 2.028484 GTCGCCGAACCAGACACA 59.972 61.111 0.00 0.00 35.19 3.72
2556 2780 2.737376 GGTCGCCGAACCAGACAC 60.737 66.667 0.00 0.00 39.27 3.67
2557 2781 2.915659 AGGTCGCCGAACCAGACA 60.916 61.111 0.00 0.00 42.12 3.41
2558 2782 2.432628 CAGGTCGCCGAACCAGAC 60.433 66.667 0.00 0.00 42.12 3.51
2559 2783 2.035237 AAACAGGTCGCCGAACCAGA 62.035 55.000 0.00 0.00 42.12 3.86
2560 2784 1.164041 AAAACAGGTCGCCGAACCAG 61.164 55.000 0.00 0.00 42.12 4.00
2561 2785 1.153127 AAAACAGGTCGCCGAACCA 60.153 52.632 0.00 0.00 42.12 3.67
2562 2786 1.572941 GAAAACAGGTCGCCGAACC 59.427 57.895 0.00 0.00 39.80 3.62
2563 2787 0.883370 AGGAAAACAGGTCGCCGAAC 60.883 55.000 0.00 0.00 0.00 3.95
2564 2788 0.882927 CAGGAAAACAGGTCGCCGAA 60.883 55.000 0.00 0.00 0.00 4.30
2565 2789 1.301401 CAGGAAAACAGGTCGCCGA 60.301 57.895 0.00 0.00 0.00 5.54
2566 2790 2.966309 GCAGGAAAACAGGTCGCCG 61.966 63.158 0.00 0.00 0.00 6.46
2567 2791 2.626780 GGCAGGAAAACAGGTCGCC 61.627 63.158 0.00 0.00 0.00 5.54
2568 2792 1.452145 TTGGCAGGAAAACAGGTCGC 61.452 55.000 0.00 0.00 0.00 5.19
2569 2793 1.068333 CATTGGCAGGAAAACAGGTCG 60.068 52.381 0.00 0.00 0.00 4.79
2570 2794 1.273327 CCATTGGCAGGAAAACAGGTC 59.727 52.381 0.00 0.00 0.00 3.85
2571 2795 1.341080 CCATTGGCAGGAAAACAGGT 58.659 50.000 0.00 0.00 0.00 4.00
2572 2796 1.341080 ACCATTGGCAGGAAAACAGG 58.659 50.000 1.54 0.00 0.00 4.00
2573 2797 3.057315 CACTACCATTGGCAGGAAAACAG 60.057 47.826 7.83 0.00 0.00 3.16
2574 2798 2.890311 CACTACCATTGGCAGGAAAACA 59.110 45.455 7.83 0.00 0.00 2.83
2575 2799 2.231235 CCACTACCATTGGCAGGAAAAC 59.769 50.000 7.83 0.00 0.00 2.43
2576 2800 2.109128 TCCACTACCATTGGCAGGAAAA 59.891 45.455 7.83 0.00 33.71 2.29
2577 2801 1.707989 TCCACTACCATTGGCAGGAAA 59.292 47.619 7.83 0.00 33.71 3.13
2578 2802 1.367346 TCCACTACCATTGGCAGGAA 58.633 50.000 7.83 0.00 33.71 3.36
2579 2803 1.490490 GATCCACTACCATTGGCAGGA 59.510 52.381 7.83 7.94 33.71 3.86
2580 2804 1.212688 TGATCCACTACCATTGGCAGG 59.787 52.381 7.83 2.88 33.71 4.85
2581 2805 2.092753 ACTGATCCACTACCATTGGCAG 60.093 50.000 1.54 1.28 33.71 4.85
2582 2806 1.915489 ACTGATCCACTACCATTGGCA 59.085 47.619 1.54 0.00 33.71 4.92
2583 2807 2.171448 AGACTGATCCACTACCATTGGC 59.829 50.000 1.54 0.00 33.71 4.52
2584 2808 4.194640 CAAGACTGATCCACTACCATTGG 58.805 47.826 0.00 0.00 35.18 3.16
2585 2809 4.080919 TCCAAGACTGATCCACTACCATTG 60.081 45.833 0.00 0.00 0.00 2.82
2586 2810 4.104086 TCCAAGACTGATCCACTACCATT 58.896 43.478 0.00 0.00 0.00 3.16
2587 2811 3.724478 TCCAAGACTGATCCACTACCAT 58.276 45.455 0.00 0.00 0.00 3.55
2588 2812 3.184382 TCCAAGACTGATCCACTACCA 57.816 47.619 0.00 0.00 0.00 3.25
2589 2813 3.742640 GCATCCAAGACTGATCCACTACC 60.743 52.174 0.00 0.00 0.00 3.18
2590 2814 3.462021 GCATCCAAGACTGATCCACTAC 58.538 50.000 0.00 0.00 0.00 2.73
2591 2815 2.435805 GGCATCCAAGACTGATCCACTA 59.564 50.000 0.00 0.00 0.00 2.74
2592 2816 1.211457 GGCATCCAAGACTGATCCACT 59.789 52.381 0.00 0.00 0.00 4.00
2593 2817 1.673168 GGCATCCAAGACTGATCCAC 58.327 55.000 0.00 0.00 0.00 4.02
2594 2818 0.178767 CGGCATCCAAGACTGATCCA 59.821 55.000 0.00 0.00 0.00 3.41
2595 2819 0.533755 CCGGCATCCAAGACTGATCC 60.534 60.000 0.00 0.00 0.00 3.36
2596 2820 0.533755 CCCGGCATCCAAGACTGATC 60.534 60.000 0.00 0.00 0.00 2.92
2597 2821 1.528824 CCCGGCATCCAAGACTGAT 59.471 57.895 0.00 0.00 0.00 2.90
2598 2822 2.669133 CCCCGGCATCCAAGACTGA 61.669 63.158 0.00 0.00 0.00 3.41
2599 2823 2.124570 CCCCGGCATCCAAGACTG 60.125 66.667 0.00 0.00 0.00 3.51
2600 2824 4.115199 GCCCCGGCATCCAAGACT 62.115 66.667 0.00 0.00 41.49 3.24
2624 2848 1.077285 TGCAGCCTGACCATCCATG 60.077 57.895 0.00 0.00 0.00 3.66
2625 2849 1.077212 GTGCAGCCTGACCATCCAT 60.077 57.895 0.00 0.00 0.00 3.41
2626 2850 2.226315 AGTGCAGCCTGACCATCCA 61.226 57.895 0.00 0.00 0.00 3.41
2627 2851 1.748122 CAGTGCAGCCTGACCATCC 60.748 63.158 0.00 0.00 34.23 3.51
2628 2852 1.748122 CCAGTGCAGCCTGACCATC 60.748 63.158 11.35 0.00 34.23 3.51
2629 2853 2.353958 CCAGTGCAGCCTGACCAT 59.646 61.111 11.35 0.00 34.23 3.55
2630 2854 3.170672 ACCAGTGCAGCCTGACCA 61.171 61.111 11.35 0.00 34.23 4.02
2631 2855 2.670934 CACCAGTGCAGCCTGACC 60.671 66.667 11.35 0.00 34.23 4.02
2632 2856 2.670934 CCACCAGTGCAGCCTGAC 60.671 66.667 11.35 0.00 34.23 3.51
2633 2857 4.648626 GCCACCAGTGCAGCCTGA 62.649 66.667 11.35 0.00 34.23 3.86
2634 2858 3.258228 TAGCCACCAGTGCAGCCTG 62.258 63.158 0.00 0.00 0.00 4.85
2635 2859 2.930019 TAGCCACCAGTGCAGCCT 60.930 61.111 0.00 0.00 0.00 4.58
2636 2860 2.437359 CTAGCCACCAGTGCAGCC 60.437 66.667 0.00 0.00 0.00 4.85
2637 2861 1.302832 AACTAGCCACCAGTGCAGC 60.303 57.895 0.00 0.00 0.00 5.25
2638 2862 0.957395 CCAACTAGCCACCAGTGCAG 60.957 60.000 0.00 0.00 0.00 4.41
2639 2863 1.073025 CCAACTAGCCACCAGTGCA 59.927 57.895 0.00 0.00 0.00 4.57
2640 2864 2.335712 GCCAACTAGCCACCAGTGC 61.336 63.158 0.00 0.00 0.00 4.40
2641 2865 0.957395 CTGCCAACTAGCCACCAGTG 60.957 60.000 0.00 0.00 0.00 3.66
2642 2866 1.376466 CTGCCAACTAGCCACCAGT 59.624 57.895 0.00 0.00 0.00 4.00
2643 2867 1.377725 CCTGCCAACTAGCCACCAG 60.378 63.158 0.00 0.00 0.00 4.00
2644 2868 2.153401 ACCTGCCAACTAGCCACCA 61.153 57.895 0.00 0.00 0.00 4.17
2645 2869 1.675641 CACCTGCCAACTAGCCACC 60.676 63.158 0.00 0.00 0.00 4.61
2646 2870 1.675641 CCACCTGCCAACTAGCCAC 60.676 63.158 0.00 0.00 0.00 5.01
2647 2871 1.841302 CTCCACCTGCCAACTAGCCA 61.841 60.000 0.00 0.00 0.00 4.75
2648 2872 1.078143 CTCCACCTGCCAACTAGCC 60.078 63.158 0.00 0.00 0.00 3.93
2649 2873 0.036875 AACTCCACCTGCCAACTAGC 59.963 55.000 0.00 0.00 0.00 3.42
2650 2874 1.072331 ACAACTCCACCTGCCAACTAG 59.928 52.381 0.00 0.00 0.00 2.57
2651 2875 1.136828 ACAACTCCACCTGCCAACTA 58.863 50.000 0.00 0.00 0.00 2.24
2652 2876 1.072331 CTACAACTCCACCTGCCAACT 59.928 52.381 0.00 0.00 0.00 3.16
2653 2877 1.523758 CTACAACTCCACCTGCCAAC 58.476 55.000 0.00 0.00 0.00 3.77
2654 2878 0.250727 GCTACAACTCCACCTGCCAA 60.251 55.000 0.00 0.00 0.00 4.52
2655 2879 1.374947 GCTACAACTCCACCTGCCA 59.625 57.895 0.00 0.00 0.00 4.92
2656 2880 0.674895 CTGCTACAACTCCACCTGCC 60.675 60.000 0.00 0.00 0.00 4.85
2657 2881 0.035458 ACTGCTACAACTCCACCTGC 59.965 55.000 0.00 0.00 0.00 4.85
2658 2882 2.146342 CAACTGCTACAACTCCACCTG 58.854 52.381 0.00 0.00 0.00 4.00
2659 2883 1.768870 ACAACTGCTACAACTCCACCT 59.231 47.619 0.00 0.00 0.00 4.00
2660 2884 2.256117 ACAACTGCTACAACTCCACC 57.744 50.000 0.00 0.00 0.00 4.61
2661 2885 2.290641 CCAACAACTGCTACAACTCCAC 59.709 50.000 0.00 0.00 0.00 4.02
2662 2886 2.571212 CCAACAACTGCTACAACTCCA 58.429 47.619 0.00 0.00 0.00 3.86
2663 2887 1.266989 GCCAACAACTGCTACAACTCC 59.733 52.381 0.00 0.00 0.00 3.85
2664 2888 1.069906 CGCCAACAACTGCTACAACTC 60.070 52.381 0.00 0.00 0.00 3.01
2665 2889 0.944386 CGCCAACAACTGCTACAACT 59.056 50.000 0.00 0.00 0.00 3.16
2666 2890 0.040425 CCGCCAACAACTGCTACAAC 60.040 55.000 0.00 0.00 0.00 3.32
2667 2891 0.464735 ACCGCCAACAACTGCTACAA 60.465 50.000 0.00 0.00 0.00 2.41
2668 2892 1.147376 ACCGCCAACAACTGCTACA 59.853 52.632 0.00 0.00 0.00 2.74
2669 2893 1.164041 ACACCGCCAACAACTGCTAC 61.164 55.000 0.00 0.00 0.00 3.58
2670 2894 1.147376 ACACCGCCAACAACTGCTA 59.853 52.632 0.00 0.00 0.00 3.49
2671 2895 2.124320 ACACCGCCAACAACTGCT 60.124 55.556 0.00 0.00 0.00 4.24
2672 2896 2.026014 CACACCGCCAACAACTGC 59.974 61.111 0.00 0.00 0.00 4.40
2673 2897 2.003658 AAGCACACCGCCAACAACTG 62.004 55.000 0.00 0.00 44.04 3.16
2674 2898 1.724582 GAAGCACACCGCCAACAACT 61.725 55.000 0.00 0.00 44.04 3.16
2675 2899 1.299089 GAAGCACACCGCCAACAAC 60.299 57.895 0.00 0.00 44.04 3.32
2676 2900 1.723608 CTGAAGCACACCGCCAACAA 61.724 55.000 0.00 0.00 44.04 2.83
2677 2901 2.124529 TGAAGCACACCGCCAACA 60.125 55.556 0.00 0.00 44.04 3.33
2678 2902 1.891919 TCTGAAGCACACCGCCAAC 60.892 57.895 0.00 0.00 44.04 3.77
2679 2903 1.891919 GTCTGAAGCACACCGCCAA 60.892 57.895 0.00 0.00 44.04 4.52
2680 2904 2.280797 GTCTGAAGCACACCGCCA 60.281 61.111 0.00 0.00 44.04 5.69
2681 2905 1.672356 ATGTCTGAAGCACACCGCC 60.672 57.895 0.00 0.00 44.04 6.13
2682 2906 1.499056 CATGTCTGAAGCACACCGC 59.501 57.895 0.00 0.00 42.91 5.68
2683 2907 0.320683 TCCATGTCTGAAGCACACCG 60.321 55.000 0.00 0.00 0.00 4.94
2684 2908 1.446907 CTCCATGTCTGAAGCACACC 58.553 55.000 0.00 0.00 0.00 4.16
2685 2909 1.446907 CCTCCATGTCTGAAGCACAC 58.553 55.000 0.00 0.00 0.00 3.82
2686 2910 0.321919 GCCTCCATGTCTGAAGCACA 60.322 55.000 0.00 0.00 0.00 4.57
2687 2911 1.364626 CGCCTCCATGTCTGAAGCAC 61.365 60.000 0.00 0.00 0.00 4.40
2688 2912 1.078918 CGCCTCCATGTCTGAAGCA 60.079 57.895 0.00 0.00 0.00 3.91
2689 2913 1.817099 CCGCCTCCATGTCTGAAGC 60.817 63.158 0.00 0.00 0.00 3.86
2690 2914 1.817099 GCCGCCTCCATGTCTGAAG 60.817 63.158 0.00 0.00 0.00 3.02
2691 2915 2.268920 GCCGCCTCCATGTCTGAA 59.731 61.111 0.00 0.00 0.00 3.02
2692 2916 4.147449 CGCCGCCTCCATGTCTGA 62.147 66.667 0.00 0.00 0.00 3.27
2693 2917 4.147449 TCGCCGCCTCCATGTCTG 62.147 66.667 0.00 0.00 0.00 3.51
2694 2918 3.842923 CTCGCCGCCTCCATGTCT 61.843 66.667 0.00 0.00 0.00 3.41
2695 2919 4.148825 ACTCGCCGCCTCCATGTC 62.149 66.667 0.00 0.00 0.00 3.06
2696 2920 4.457496 CACTCGCCGCCTCCATGT 62.457 66.667 0.00 0.00 0.00 3.21
2697 2921 3.958147 AACACTCGCCGCCTCCATG 62.958 63.158 0.00 0.00 0.00 3.66
2698 2922 3.665675 GAACACTCGCCGCCTCCAT 62.666 63.158 0.00 0.00 0.00 3.41
2699 2923 4.373116 GAACACTCGCCGCCTCCA 62.373 66.667 0.00 0.00 0.00 3.86
2701 2925 4.070552 AGGAACACTCGCCGCCTC 62.071 66.667 0.00 0.00 0.00 4.70
2702 2926 4.379243 CAGGAACACTCGCCGCCT 62.379 66.667 0.00 0.00 0.00 5.52
2704 2928 4.681978 ACCAGGAACACTCGCCGC 62.682 66.667 0.00 0.00 0.00 6.53
2705 2929 2.709125 TTCACCAGGAACACTCGCCG 62.709 60.000 0.00 0.00 0.00 6.46
2706 2930 0.951040 CTTCACCAGGAACACTCGCC 60.951 60.000 0.00 0.00 0.00 5.54
2707 2931 0.249911 ACTTCACCAGGAACACTCGC 60.250 55.000 0.00 0.00 0.00 5.03
2708 2932 1.867233 CAACTTCACCAGGAACACTCG 59.133 52.381 0.00 0.00 0.00 4.18
2709 2933 2.614057 CACAACTTCACCAGGAACACTC 59.386 50.000 0.00 0.00 0.00 3.51
2710 2934 2.643551 CACAACTTCACCAGGAACACT 58.356 47.619 0.00 0.00 0.00 3.55
2711 2935 1.065551 GCACAACTTCACCAGGAACAC 59.934 52.381 0.00 0.00 0.00 3.32
2712 2936 1.064758 AGCACAACTTCACCAGGAACA 60.065 47.619 0.00 0.00 0.00 3.18
2713 2937 1.604278 GAGCACAACTTCACCAGGAAC 59.396 52.381 0.00 0.00 0.00 3.62
2714 2938 1.810031 CGAGCACAACTTCACCAGGAA 60.810 52.381 0.00 0.00 0.00 3.36
2715 2939 0.249868 CGAGCACAACTTCACCAGGA 60.250 55.000 0.00 0.00 0.00 3.86
2716 2940 1.230635 CCGAGCACAACTTCACCAGG 61.231 60.000 0.00 0.00 0.00 4.45
2717 2941 1.845809 GCCGAGCACAACTTCACCAG 61.846 60.000 0.00 0.00 0.00 4.00
2718 2942 1.891919 GCCGAGCACAACTTCACCA 60.892 57.895 0.00 0.00 0.00 4.17
2719 2943 2.946762 GCCGAGCACAACTTCACC 59.053 61.111 0.00 0.00 0.00 4.02
2720 2944 2.551270 CGCCGAGCACAACTTCAC 59.449 61.111 0.00 0.00 0.00 3.18
2721 2945 2.664851 CCGCCGAGCACAACTTCA 60.665 61.111 0.00 0.00 0.00 3.02
2722 2946 4.090057 GCCGCCGAGCACAACTTC 62.090 66.667 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.