Multiple sequence alignment - TraesCS2D01G519500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G519500 chr2D 100.000 5756 0 0 1 5756 609418916 609424671 0.000000e+00 10630.0
1 TraesCS2D01G519500 chr2D 86.353 894 88 25 2319 3193 609287708 609288586 0.000000e+00 944.0
2 TraesCS2D01G519500 chr2D 80.863 533 62 18 986 1512 609286675 609287173 3.250000e-102 383.0
3 TraesCS2D01G519500 chr2A 93.487 2687 106 25 2110 4761 741369024 741371676 0.000000e+00 3928.0
4 TraesCS2D01G519500 chr2A 91.221 2130 117 28 1 2117 741366683 741368755 0.000000e+00 2833.0
5 TraesCS2D01G519500 chr2A 83.047 466 31 10 5334 5756 741372186 741372646 4.210000e-101 379.0
6 TraesCS2D01G519500 chr2B 91.703 2073 106 24 257 2292 743689160 743691203 0.000000e+00 2815.0
7 TraesCS2D01G519500 chr2B 92.188 1536 75 20 2275 3797 743691216 743692719 0.000000e+00 2130.0
8 TraesCS2D01G519500 chr2B 92.593 756 41 5 3923 4668 743693006 743693756 0.000000e+00 1072.0
9 TraesCS2D01G519500 chr2B 90.123 405 32 8 2319 2718 743334014 743334415 2.380000e-143 520.0
10 TraesCS2D01G519500 chr2B 86.861 411 17 9 5370 5748 743694353 743694758 5.330000e-115 425.0
11 TraesCS2D01G519500 chr2B 94.022 184 7 1 4675 4854 743693844 743694027 5.680000e-70 276.0
12 TraesCS2D01G519500 chr7A 88.906 640 54 7 1 625 205106225 205106862 0.000000e+00 773.0
13 TraesCS2D01G519500 chr7A 100.000 28 0 0 5113 5140 127370195 127370222 1.000000e-02 52.8
14 TraesCS2D01G519500 chr3A 88.691 619 55 8 1 605 75639984 75640601 0.000000e+00 741.0
15 TraesCS2D01G519500 chr3A 84.699 647 71 18 24 644 712531951 712531307 6.330000e-174 621.0
16 TraesCS2D01G519500 chr3A 84.242 660 77 17 10 645 50549071 50548415 8.190000e-173 617.0
17 TraesCS2D01G519500 chr7D 85.759 639 68 14 24 641 514101079 514100443 0.000000e+00 654.0
18 TraesCS2D01G519500 chr7D 84.810 632 69 20 24 633 514115289 514114663 1.370000e-170 610.0
19 TraesCS2D01G519500 chr7D 84.541 621 71 16 1 599 157097069 157097686 4.970000e-165 592.0
20 TraesCS2D01G519500 chr3B 84.858 634 67 21 24 635 68886091 68885465 3.810000e-171 612.0
21 TraesCS2D01G519500 chr7B 83.969 655 79 18 1 632 89947466 89948117 6.380000e-169 604.0
22 TraesCS2D01G519500 chr7B 100.000 30 0 0 5112 5141 332170412 332170441 8.060000e-04 56.5
23 TraesCS2D01G519500 chr5D 84.686 542 63 12 1 524 485888305 485887766 1.840000e-144 523.0
24 TraesCS2D01G519500 chr4B 89.894 188 18 1 454 641 279330780 279330966 2.070000e-59 241.0
25 TraesCS2D01G519500 chr6B 90.110 182 14 2 463 641 331017981 331018161 3.470000e-57 233.0
26 TraesCS2D01G519500 chr5B 91.018 167 13 2 467 632 116662057 116662222 2.090000e-54 224.0
27 TraesCS2D01G519500 chr5B 89.773 176 16 2 467 641 704889602 704889776 2.090000e-54 224.0
28 TraesCS2D01G519500 chr6A 92.500 40 1 2 5111 5150 560448333 560448296 8.060000e-04 56.5
29 TraesCS2D01G519500 chr6A 92.500 40 1 2 5111 5150 560492022 560491985 8.060000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G519500 chr2D 609418916 609424671 5755 False 10630.0 10630 100.000000 1 5756 1 chr2D.!!$F1 5755
1 TraesCS2D01G519500 chr2D 609286675 609288586 1911 False 663.5 944 83.608000 986 3193 2 chr2D.!!$F2 2207
2 TraesCS2D01G519500 chr2A 741366683 741372646 5963 False 2380.0 3928 89.251667 1 5756 3 chr2A.!!$F1 5755
3 TraesCS2D01G519500 chr2B 743689160 743694758 5598 False 1343.6 2815 91.473400 257 5748 5 chr2B.!!$F2 5491
4 TraesCS2D01G519500 chr7A 205106225 205106862 637 False 773.0 773 88.906000 1 625 1 chr7A.!!$F2 624
5 TraesCS2D01G519500 chr3A 75639984 75640601 617 False 741.0 741 88.691000 1 605 1 chr3A.!!$F1 604
6 TraesCS2D01G519500 chr3A 712531307 712531951 644 True 621.0 621 84.699000 24 644 1 chr3A.!!$R2 620
7 TraesCS2D01G519500 chr3A 50548415 50549071 656 True 617.0 617 84.242000 10 645 1 chr3A.!!$R1 635
8 TraesCS2D01G519500 chr7D 514100443 514101079 636 True 654.0 654 85.759000 24 641 1 chr7D.!!$R1 617
9 TraesCS2D01G519500 chr7D 514114663 514115289 626 True 610.0 610 84.810000 24 633 1 chr7D.!!$R2 609
10 TraesCS2D01G519500 chr7D 157097069 157097686 617 False 592.0 592 84.541000 1 599 1 chr7D.!!$F1 598
11 TraesCS2D01G519500 chr3B 68885465 68886091 626 True 612.0 612 84.858000 24 635 1 chr3B.!!$R1 611
12 TraesCS2D01G519500 chr7B 89947466 89948117 651 False 604.0 604 83.969000 1 632 1 chr7B.!!$F1 631
13 TraesCS2D01G519500 chr5D 485887766 485888305 539 True 523.0 523 84.686000 1 524 1 chr5D.!!$R1 523

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
618 658 1.816074 TGTTTCTAACACATCCGCCC 58.184 50.000 0.00 0.00 36.25 6.13 F
1360 1413 0.394899 GACCTGCCCATTCCTCTTGG 60.395 60.000 0.00 0.00 0.00 3.61 F
1800 1923 0.913876 GTTTTGTGTGTGCTGCGTTC 59.086 50.000 0.00 0.00 0.00 3.95 F
3446 3937 1.070134 ACTCGCAGTCTGCTGGTTTTA 59.930 47.619 22.13 0.18 42.25 1.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2118 2517 0.319813 GCTGGAATGGTTGGTTGCAC 60.320 55.000 0.00 0.0 0.00 4.57 R
2437 2898 2.833943 ACTTCCATGGCAAGGATTTTCC 59.166 45.455 12.90 0.0 34.56 3.13 R
3587 4079 0.392998 ACGATGCATGGGTTCAGGTC 60.393 55.000 13.62 0.0 0.00 3.85 R
4928 6005 0.107508 CAGATGAGGGCAATGTCGGT 60.108 55.000 0.00 0.0 0.00 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.292389 TGGGGATGTGCTTTGATTCCAT 60.292 45.455 0.00 0.00 0.00 3.41
117 123 7.815840 TTCTGATACACAGGTTTTTCATGAA 57.184 32.000 3.38 3.38 45.76 2.57
139 145 3.281727 TTCAGAGACAGGCAAGTGTTT 57.718 42.857 0.00 0.00 0.00 2.83
216 232 2.421751 TTTCAGGAAACACAACCGGA 57.578 45.000 9.46 0.00 0.00 5.14
334 350 2.830370 CCCCGGCAAGCTTGATCC 60.830 66.667 30.39 20.27 0.00 3.36
526 565 3.445096 GGCTGTTGCAGGAAGTAATGATT 59.555 43.478 0.00 0.00 41.91 2.57
618 658 1.816074 TGTTTCTAACACATCCGCCC 58.184 50.000 0.00 0.00 36.25 6.13
927 969 3.197790 CCTCGCGGCCACATTCTG 61.198 66.667 6.13 0.00 0.00 3.02
928 970 3.869272 CTCGCGGCCACATTCTGC 61.869 66.667 6.13 0.00 0.00 4.26
1026 1068 4.664267 TGCCCCTGCTCCACCTCT 62.664 66.667 0.00 0.00 38.71 3.69
1060 1105 3.465403 CACTCTCCCTCCTGCCCG 61.465 72.222 0.00 0.00 0.00 6.13
1203 1251 1.292223 CAAGGACGAGAAGGCGGAA 59.708 57.895 0.00 0.00 35.12 4.30
1218 1269 2.687566 GAAGCGGGGGAGGAGGAA 60.688 66.667 0.00 0.00 0.00 3.36
1224 1275 1.635051 GGGGGAGGAGGAAGGAGAT 59.365 63.158 0.00 0.00 0.00 2.75
1350 1403 2.270850 GTAATGCCGACCTGCCCA 59.729 61.111 0.00 0.00 0.00 5.36
1360 1413 0.394899 GACCTGCCCATTCCTCTTGG 60.395 60.000 0.00 0.00 0.00 3.61
1365 1418 1.146774 TGCCCATTCCTCTTGGTTGAA 59.853 47.619 0.00 0.00 31.99 2.69
1372 1425 3.492102 TCCTCTTGGTTGAACCTTCTG 57.508 47.619 16.33 3.75 39.58 3.02
1685 1781 4.386867 ACTCTCTCGAAACAAGTGTTGA 57.613 40.909 0.00 0.00 38.44 3.18
1686 1782 4.113354 ACTCTCTCGAAACAAGTGTTGAC 58.887 43.478 0.00 0.00 38.44 3.18
1778 1888 6.753279 TGCTGCTGCTATAAAATTGATGTTTC 59.247 34.615 17.00 0.00 40.48 2.78
1784 1899 9.643693 CTGCTATAAAATTGATGTTTCAGGTTT 57.356 29.630 0.00 0.00 32.27 3.27
1800 1923 0.913876 GTTTTGTGTGTGCTGCGTTC 59.086 50.000 0.00 0.00 0.00 3.95
2014 2137 3.270877 AGCTTCATTGACCACGTATTCC 58.729 45.455 0.00 0.00 0.00 3.01
2056 2179 4.706962 ACTAGCCCTTCTTATTTTGCCTTG 59.293 41.667 0.00 0.00 0.00 3.61
2107 2230 7.981789 TGAACTGGTCACTTATAAAGATAGCTG 59.018 37.037 0.00 0.00 0.00 4.24
2118 2517 9.241317 CTTATAAAGATAGCTGCATGTTTTTGG 57.759 33.333 1.02 0.00 0.00 3.28
2292 2721 6.177610 GTCTGTGGAATTCCTGGTACAAATA 58.822 40.000 24.73 6.92 38.70 1.40
2437 2898 6.765989 TCCAGGTACATATTTGGAAGATTTCG 59.234 38.462 0.00 0.00 36.81 3.46
2600 3066 2.814336 CAGCCCACTTACTGTTTCTTCC 59.186 50.000 0.00 0.00 0.00 3.46
2722 3191 7.064609 TGCTTCGGTAGATTTCAAAACTATGAG 59.935 37.037 0.00 0.00 0.00 2.90
2742 3211 6.072112 TGAGTCCAAACATTTAAACAGCTC 57.928 37.500 0.00 0.00 0.00 4.09
2748 3217 6.640499 TCCAAACATTTAAACAGCTCAAATCG 59.360 34.615 0.00 0.00 0.00 3.34
2846 3315 9.651913 TTTTTCATCTATTGGGTCTTATTTTGC 57.348 29.630 0.00 0.00 0.00 3.68
3209 3699 4.487412 GCGGAAGTGCATGCTGCC 62.487 66.667 20.33 13.12 44.23 4.85
3223 3713 1.949525 TGCTGCCTGAAACAAGAGAAC 59.050 47.619 0.00 0.00 0.00 3.01
3387 3878 1.537348 GCCGACGTATACAGATTGCCA 60.537 52.381 3.32 0.00 0.00 4.92
3437 3928 2.724977 TTGTCCTTACTCGCAGTCTG 57.275 50.000 0.00 0.00 0.00 3.51
3446 3937 1.070134 ACTCGCAGTCTGCTGGTTTTA 59.930 47.619 22.13 0.18 42.25 1.52
3456 3947 5.938125 AGTCTGCTGGTTTTATTACGTTCAT 59.062 36.000 0.00 0.00 0.00 2.57
3550 4041 9.762381 AAAGGAATACAAGTTTTACATGGGATA 57.238 29.630 0.00 0.00 0.00 2.59
3605 4097 0.392863 TGACCTGAACCCATGCATCG 60.393 55.000 0.00 0.00 0.00 3.84
3619 4118 5.645067 CCCATGCATCGTCATAAGTCATAAT 59.355 40.000 0.00 0.00 0.00 1.28
3645 4144 0.325296 TACTCATGCCTTCCCCTCGT 60.325 55.000 0.00 0.00 0.00 4.18
3748 4247 3.152261 AGTCATACTTTCGCTCTTCGG 57.848 47.619 0.00 0.00 39.05 4.30
3798 4297 2.992543 TGCCTATGCATTTTTGTTTCGC 59.007 40.909 3.54 0.00 44.23 4.70
3799 4298 2.027926 GCCTATGCATTTTTGTTTCGCG 59.972 45.455 3.54 0.00 37.47 5.87
3902 4593 1.112315 ATGTTTCGGTTGGCTTGCCA 61.112 50.000 10.65 10.65 0.00 4.92
3917 4610 6.294473 TGGCTTGCCATTTTTCTTGAATAAA 58.706 32.000 10.65 0.00 0.00 1.40
3921 4614 9.120422 GCTTGCCATTTTTCTTGAATAAAATTG 57.880 29.630 0.00 4.62 33.04 2.32
3946 4639 8.877195 TGGTTAGACTTCCAAATTACTAGTTCT 58.123 33.333 0.00 0.00 0.00 3.01
3949 4642 9.924650 TTAGACTTCCAAATTACTAGTTCTGAC 57.075 33.333 0.00 0.00 0.00 3.51
3961 4654 3.782889 AGTTCTGACTTGTTTGGCAAC 57.217 42.857 0.00 0.00 29.87 4.17
3983 4676 7.119846 GCAACCTTAACATCTCACTCTTGTATT 59.880 37.037 0.00 0.00 0.00 1.89
3993 4690 9.956720 CATCTCACTCTTGTATTTCTTTTGTTT 57.043 29.630 0.00 0.00 0.00 2.83
4016 4713 0.448990 TAGCATTGCTTGAAGCTGCG 59.551 50.000 20.81 9.96 44.22 5.18
4090 4787 4.942944 TCCAACAGGTAGACTTATCCTCA 58.057 43.478 0.00 0.00 0.00 3.86
4234 4934 6.464834 CAGGCAAATTACTTATCGAACGTTTC 59.535 38.462 0.46 0.00 0.00 2.78
4236 4936 6.681599 GGCAAATTACTTATCGAACGTTTCTC 59.318 38.462 0.46 0.00 0.00 2.87
4330 5030 2.089980 GACAAGTACCTACCGCTCTCA 58.910 52.381 0.00 0.00 0.00 3.27
4604 5317 7.595819 ATTACCCAGTTTCTGAAAATCACAA 57.404 32.000 4.09 0.00 32.44 3.33
4649 5362 7.039993 TGTGTGCTAACATTCAGTCTAGTCTAA 60.040 37.037 0.00 0.00 38.92 2.10
4677 5481 6.609533 AGACGCGTTATACTAGATTGTATGG 58.390 40.000 15.53 0.00 35.14 2.74
4701 5505 1.687494 GCTGATCACTGACGCGGTTC 61.687 60.000 12.47 0.00 0.00 3.62
4768 5730 9.482627 CCTTCCTGTATTAGTCTATTCATTGAC 57.517 37.037 0.00 0.00 33.64 3.18
4827 5793 7.961325 TCAGTTGGTATATACGTACGTCATA 57.039 36.000 26.53 19.49 0.00 2.15
4855 5821 6.389830 AAATTGTACAGTTCAGATGCACAA 57.610 33.333 3.87 0.00 38.08 3.33
4857 5823 7.686438 AATTGTACAGTTCAGATGCACAATA 57.314 32.000 0.00 0.00 41.55 1.90
4882 5947 7.688478 TGTGTGCGAGTAAATGTATGTATAC 57.312 36.000 0.00 0.00 0.00 1.47
4909 5986 4.141711 GGCATGATCTTCAGTTACCCAGTA 60.142 45.833 0.00 0.00 0.00 2.74
4914 5991 2.230508 TCTTCAGTTACCCAGTAGTGCG 59.769 50.000 0.00 0.00 0.00 5.34
4921 5998 2.685850 ACCCAGTAGTGCGGTTATTC 57.314 50.000 5.22 0.00 0.00 1.75
4927 6004 4.242475 CAGTAGTGCGGTTATTCACTTGA 58.758 43.478 0.01 0.00 42.81 3.02
4928 6005 4.688879 CAGTAGTGCGGTTATTCACTTGAA 59.311 41.667 0.01 0.00 42.81 2.69
4929 6006 4.689345 AGTAGTGCGGTTATTCACTTGAAC 59.311 41.667 0.01 0.00 42.81 3.18
4936 6013 5.622770 GGTTATTCACTTGAACCGACATT 57.377 39.130 0.00 0.00 36.80 2.71
4938 6015 3.559238 ATTCACTTGAACCGACATTGC 57.441 42.857 0.00 0.00 36.80 3.56
4939 6016 1.234821 TCACTTGAACCGACATTGCC 58.765 50.000 0.00 0.00 0.00 4.52
4940 6017 0.240945 CACTTGAACCGACATTGCCC 59.759 55.000 0.00 0.00 0.00 5.36
4941 6018 0.110486 ACTTGAACCGACATTGCCCT 59.890 50.000 0.00 0.00 0.00 5.19
4942 6019 0.804989 CTTGAACCGACATTGCCCTC 59.195 55.000 0.00 0.00 0.00 4.30
4943 6020 0.109532 TTGAACCGACATTGCCCTCA 59.890 50.000 0.00 0.00 0.00 3.86
4944 6021 0.327924 TGAACCGACATTGCCCTCAT 59.672 50.000 0.00 0.00 0.00 2.90
4945 6022 1.017387 GAACCGACATTGCCCTCATC 58.983 55.000 0.00 0.00 0.00 2.92
4946 6023 0.620556 AACCGACATTGCCCTCATCT 59.379 50.000 0.00 0.00 0.00 2.90
4947 6024 0.107508 ACCGACATTGCCCTCATCTG 60.108 55.000 0.00 0.00 0.00 2.90
4948 6025 0.107508 CCGACATTGCCCTCATCTGT 60.108 55.000 0.00 0.00 0.00 3.41
4949 6026 1.012086 CGACATTGCCCTCATCTGTG 58.988 55.000 0.00 0.00 0.00 3.66
4950 6027 1.676916 CGACATTGCCCTCATCTGTGT 60.677 52.381 0.00 0.00 0.00 3.72
4951 6028 2.012673 GACATTGCCCTCATCTGTGTC 58.987 52.381 0.00 0.00 0.00 3.67
4952 6029 1.352017 ACATTGCCCTCATCTGTGTCA 59.648 47.619 0.00 0.00 0.00 3.58
4953 6030 2.014857 CATTGCCCTCATCTGTGTCAG 58.985 52.381 0.00 0.00 0.00 3.51
4954 6031 1.351076 TTGCCCTCATCTGTGTCAGA 58.649 50.000 1.92 1.92 44.99 3.27
4955 6032 1.351076 TGCCCTCATCTGTGTCAGAA 58.649 50.000 3.58 0.00 44.04 3.02
4956 6033 1.699083 TGCCCTCATCTGTGTCAGAAA 59.301 47.619 3.58 0.00 44.04 2.52
4957 6034 2.079925 GCCCTCATCTGTGTCAGAAAC 58.920 52.381 3.58 0.00 44.04 2.78
4958 6035 2.289945 GCCCTCATCTGTGTCAGAAACT 60.290 50.000 3.58 0.00 44.04 2.66
4961 6038 3.396560 CTCATCTGTGTCAGAAACTGCA 58.603 45.455 3.58 0.00 44.04 4.41
4962 6039 4.001652 CTCATCTGTGTCAGAAACTGCAT 58.998 43.478 3.58 0.00 44.04 3.96
4964 6041 4.823442 TCATCTGTGTCAGAAACTGCATTT 59.177 37.500 3.58 0.00 44.04 2.32
4965 6042 5.300034 TCATCTGTGTCAGAAACTGCATTTT 59.700 36.000 1.08 1.08 44.04 1.82
4967 6044 4.044336 TGTGTCAGAAACTGCATTTTGG 57.956 40.909 6.78 0.00 0.00 3.28
4968 6045 2.796593 GTGTCAGAAACTGCATTTTGGC 59.203 45.455 6.78 0.00 0.00 4.52
4969 6046 2.429971 TGTCAGAAACTGCATTTTGGCA 59.570 40.909 6.78 0.13 42.53 4.92
4970 6047 3.069872 TGTCAGAAACTGCATTTTGGCAT 59.930 39.130 6.78 0.00 43.97 4.40
4971 6048 4.060205 GTCAGAAACTGCATTTTGGCATT 58.940 39.130 6.78 0.00 43.97 3.56
4972 6049 4.059511 TCAGAAACTGCATTTTGGCATTG 58.940 39.130 6.78 0.00 43.97 2.82
4974 6051 2.934886 AACTGCATTTTGGCATTGGT 57.065 40.000 0.00 0.00 43.97 3.67
4975 6052 2.934886 ACTGCATTTTGGCATTGGTT 57.065 40.000 0.00 0.00 43.97 3.67
4977 6054 1.807742 CTGCATTTTGGCATTGGTTGG 59.192 47.619 0.00 0.00 43.97 3.77
4978 6055 1.142465 TGCATTTTGGCATTGGTTGGT 59.858 42.857 0.00 0.00 39.25 3.67
4979 6056 2.228925 GCATTTTGGCATTGGTTGGTT 58.771 42.857 0.00 0.00 0.00 3.67
4980 6057 3.181451 TGCATTTTGGCATTGGTTGGTTA 60.181 39.130 0.00 0.00 39.25 2.85
4981 6058 3.436359 GCATTTTGGCATTGGTTGGTTAG 59.564 43.478 0.00 0.00 0.00 2.34
4982 6059 2.829741 TTTGGCATTGGTTGGTTAGC 57.170 45.000 0.00 0.00 0.00 3.09
4983 6060 2.008242 TTGGCATTGGTTGGTTAGCT 57.992 45.000 0.00 0.00 0.00 3.32
4986 6063 1.448985 GCATTGGTTGGTTAGCTCGA 58.551 50.000 0.00 0.00 0.00 4.04
4987 6064 1.398390 GCATTGGTTGGTTAGCTCGAG 59.602 52.381 8.45 8.45 0.00 4.04
4988 6065 1.398390 CATTGGTTGGTTAGCTCGAGC 59.602 52.381 30.01 30.01 42.49 5.03
4989 6066 0.321298 TTGGTTGGTTAGCTCGAGCC 60.321 55.000 32.94 18.37 43.38 4.70
4990 6067 1.192146 TGGTTGGTTAGCTCGAGCCT 61.192 55.000 32.94 21.76 43.38 4.58
4991 6068 0.460459 GGTTGGTTAGCTCGAGCCTC 60.460 60.000 32.94 21.89 43.38 4.70
4992 6069 0.460459 GTTGGTTAGCTCGAGCCTCC 60.460 60.000 32.94 28.76 43.38 4.30
4993 6070 0.614979 TTGGTTAGCTCGAGCCTCCT 60.615 55.000 32.94 17.61 43.38 3.69
4994 6071 1.323271 TGGTTAGCTCGAGCCTCCTG 61.323 60.000 32.94 0.00 43.38 3.86
5038 6115 3.632643 TTTTGGACCGGGTATAACCTC 57.367 47.619 6.32 0.00 38.64 3.85
5039 6116 2.555732 TTGGACCGGGTATAACCTCT 57.444 50.000 6.32 0.00 38.64 3.69
5040 6117 2.555732 TGGACCGGGTATAACCTCTT 57.444 50.000 6.32 0.00 38.64 2.85
5041 6118 2.836667 TGGACCGGGTATAACCTCTTT 58.163 47.619 6.32 0.00 38.64 2.52
5042 6119 2.767960 TGGACCGGGTATAACCTCTTTC 59.232 50.000 6.32 0.00 38.64 2.62
5043 6120 2.103771 GGACCGGGTATAACCTCTTTCC 59.896 54.545 6.32 1.42 38.64 3.13
5044 6121 2.767960 GACCGGGTATAACCTCTTTCCA 59.232 50.000 6.32 0.00 38.64 3.53
5045 6122 3.390311 GACCGGGTATAACCTCTTTCCAT 59.610 47.826 6.32 0.00 38.64 3.41
5046 6123 3.784202 ACCGGGTATAACCTCTTTCCATT 59.216 43.478 6.32 0.00 38.64 3.16
5047 6124 4.134563 CCGGGTATAACCTCTTTCCATTG 58.865 47.826 5.01 0.00 38.64 2.82
5048 6125 4.141574 CCGGGTATAACCTCTTTCCATTGA 60.142 45.833 5.01 0.00 38.64 2.57
5049 6126 4.814771 CGGGTATAACCTCTTTCCATTGAC 59.185 45.833 5.01 0.00 38.64 3.18
5050 6127 5.396436 CGGGTATAACCTCTTTCCATTGACT 60.396 44.000 5.01 0.00 38.64 3.41
5051 6128 5.823045 GGGTATAACCTCTTTCCATTGACTG 59.177 44.000 0.00 0.00 38.64 3.51
5052 6129 6.352737 GGGTATAACCTCTTTCCATTGACTGA 60.353 42.308 0.00 0.00 38.64 3.41
5053 6130 7.110155 GGTATAACCTCTTTCCATTGACTGAA 58.890 38.462 0.00 0.00 34.73 3.02
5054 6131 7.775561 GGTATAACCTCTTTCCATTGACTGAAT 59.224 37.037 0.00 0.00 34.73 2.57
5055 6132 9.832445 GTATAACCTCTTTCCATTGACTGAATA 57.168 33.333 0.00 0.00 0.00 1.75
5057 6134 7.454260 AACCTCTTTCCATTGACTGAATAAC 57.546 36.000 0.00 0.00 0.00 1.89
5058 6135 5.643777 ACCTCTTTCCATTGACTGAATAACG 59.356 40.000 0.00 0.00 0.00 3.18
5059 6136 5.643777 CCTCTTTCCATTGACTGAATAACGT 59.356 40.000 0.00 0.00 0.00 3.99
5060 6137 6.816640 CCTCTTTCCATTGACTGAATAACGTA 59.183 38.462 0.00 0.00 0.00 3.57
5061 6138 7.333423 CCTCTTTCCATTGACTGAATAACGTAA 59.667 37.037 0.00 0.00 0.00 3.18
5062 6139 8.610248 TCTTTCCATTGACTGAATAACGTAAA 57.390 30.769 0.00 0.00 0.00 2.01
5063 6140 9.226606 TCTTTCCATTGACTGAATAACGTAAAT 57.773 29.630 0.00 0.00 0.00 1.40
5066 6143 9.438228 TTCCATTGACTGAATAACGTAAATACA 57.562 29.630 0.00 0.00 0.00 2.29
5067 6144 9.093970 TCCATTGACTGAATAACGTAAATACAG 57.906 33.333 0.00 0.00 0.00 2.74
5068 6145 7.850982 CCATTGACTGAATAACGTAAATACAGC 59.149 37.037 0.00 0.00 0.00 4.40
5069 6146 7.892778 TTGACTGAATAACGTAAATACAGCA 57.107 32.000 0.00 0.00 0.00 4.41
5070 6147 7.892778 TGACTGAATAACGTAAATACAGCAA 57.107 32.000 0.00 0.00 0.00 3.91
5071 6148 8.312896 TGACTGAATAACGTAAATACAGCAAA 57.687 30.769 0.00 0.00 0.00 3.68
5072 6149 8.225107 TGACTGAATAACGTAAATACAGCAAAC 58.775 33.333 0.00 0.00 0.00 2.93
5073 6150 8.319143 ACTGAATAACGTAAATACAGCAAACT 57.681 30.769 0.00 0.00 0.00 2.66
5074 6151 9.426837 ACTGAATAACGTAAATACAGCAAACTA 57.573 29.630 0.00 0.00 0.00 2.24
5079 6156 7.486802 AACGTAAATACAGCAAACTAAGTGT 57.513 32.000 0.00 0.00 0.00 3.55
5080 6157 8.592105 AACGTAAATACAGCAAACTAAGTGTA 57.408 30.769 0.00 0.00 0.00 2.90
5081 6158 8.236084 ACGTAAATACAGCAAACTAAGTGTAG 57.764 34.615 0.00 0.00 0.00 2.74
5082 6159 7.148689 ACGTAAATACAGCAAACTAAGTGTAGC 60.149 37.037 0.00 0.00 0.00 3.58
5083 6160 7.063074 CGTAAATACAGCAAACTAAGTGTAGCT 59.937 37.037 0.00 0.00 39.64 3.32
5084 6161 7.745620 AAATACAGCAAACTAAGTGTAGCTT 57.254 32.000 0.00 0.00 37.84 3.74
5085 6162 6.727824 ATACAGCAAACTAAGTGTAGCTTG 57.272 37.500 0.00 0.00 37.84 4.01
5086 6163 4.703897 ACAGCAAACTAAGTGTAGCTTGA 58.296 39.130 0.00 0.00 36.07 3.02
5087 6164 5.308825 ACAGCAAACTAAGTGTAGCTTGAT 58.691 37.500 0.00 0.00 36.07 2.57
5088 6165 5.625251 CAGCAAACTAAGTGTAGCTTGATG 58.375 41.667 0.00 2.01 41.07 3.07
5089 6166 4.697352 AGCAAACTAAGTGTAGCTTGATGG 59.303 41.667 0.00 0.00 36.07 3.51
5090 6167 4.455877 GCAAACTAAGTGTAGCTTGATGGT 59.544 41.667 0.00 0.00 36.07 3.55
5091 6168 5.048713 GCAAACTAAGTGTAGCTTGATGGTT 60.049 40.000 0.00 0.00 36.07 3.67
5092 6169 6.148811 GCAAACTAAGTGTAGCTTGATGGTTA 59.851 38.462 0.00 0.00 36.07 2.85
5093 6170 7.624344 GCAAACTAAGTGTAGCTTGATGGTTAG 60.624 40.741 0.00 0.00 36.07 2.34
5094 6171 5.978814 ACTAAGTGTAGCTTGATGGTTAGG 58.021 41.667 0.00 0.00 38.05 2.69
5095 6172 4.910458 AAGTGTAGCTTGATGGTTAGGT 57.090 40.909 0.00 0.00 35.80 3.08
5096 6173 4.910458 AGTGTAGCTTGATGGTTAGGTT 57.090 40.909 0.00 0.00 0.00 3.50
5097 6174 6.368779 AAGTGTAGCTTGATGGTTAGGTTA 57.631 37.500 0.00 0.00 35.80 2.85
5098 6175 5.731591 AGTGTAGCTTGATGGTTAGGTTAC 58.268 41.667 0.00 0.00 0.00 2.50
5099 6176 5.484290 AGTGTAGCTTGATGGTTAGGTTACT 59.516 40.000 0.00 0.00 0.00 2.24
5100 6177 6.013639 AGTGTAGCTTGATGGTTAGGTTACTT 60.014 38.462 0.00 0.00 0.00 2.24
5101 6178 6.092259 GTGTAGCTTGATGGTTAGGTTACTTG 59.908 42.308 0.00 0.00 0.00 3.16
5102 6179 5.242795 AGCTTGATGGTTAGGTTACTTGT 57.757 39.130 0.00 0.00 0.00 3.16
5103 6180 5.631119 AGCTTGATGGTTAGGTTACTTGTT 58.369 37.500 0.00 0.00 0.00 2.83
5104 6181 5.473504 AGCTTGATGGTTAGGTTACTTGTTG 59.526 40.000 0.00 0.00 0.00 3.33
5105 6182 5.240844 GCTTGATGGTTAGGTTACTTGTTGT 59.759 40.000 0.00 0.00 0.00 3.32
5106 6183 6.627395 TTGATGGTTAGGTTACTTGTTGTG 57.373 37.500 0.00 0.00 0.00 3.33
5107 6184 5.067273 TGATGGTTAGGTTACTTGTTGTGG 58.933 41.667 0.00 0.00 0.00 4.17
5108 6185 4.774660 TGGTTAGGTTACTTGTTGTGGA 57.225 40.909 0.00 0.00 0.00 4.02
5109 6186 5.113446 TGGTTAGGTTACTTGTTGTGGAA 57.887 39.130 0.00 0.00 0.00 3.53
5110 6187 4.883006 TGGTTAGGTTACTTGTTGTGGAAC 59.117 41.667 0.00 0.00 37.35 3.62
5111 6188 4.276678 GGTTAGGTTACTTGTTGTGGAACC 59.723 45.833 0.00 0.00 37.48 3.62
5112 6189 3.655615 AGGTTACTTGTTGTGGAACCA 57.344 42.857 10.09 0.00 38.90 3.67
5113 6190 3.551846 AGGTTACTTGTTGTGGAACCAG 58.448 45.455 10.09 0.00 38.90 4.00
5114 6191 3.053917 AGGTTACTTGTTGTGGAACCAGT 60.054 43.478 10.09 0.00 38.90 4.00
5115 6192 3.314357 GGTTACTTGTTGTGGAACCAGTC 59.686 47.826 3.24 0.00 38.61 3.51
5126 6203 2.979240 GGAACCAGTCCATCAGAGTTC 58.021 52.381 0.00 0.00 46.97 3.01
5127 6204 2.303022 GGAACCAGTCCATCAGAGTTCA 59.697 50.000 0.00 0.00 46.97 3.18
5128 6205 3.244561 GGAACCAGTCCATCAGAGTTCAA 60.245 47.826 0.00 0.00 46.97 2.69
5129 6206 3.692257 ACCAGTCCATCAGAGTTCAAG 57.308 47.619 0.00 0.00 0.00 3.02
5130 6207 2.975489 ACCAGTCCATCAGAGTTCAAGT 59.025 45.455 0.00 0.00 0.00 3.16
5131 6208 3.007398 ACCAGTCCATCAGAGTTCAAGTC 59.993 47.826 0.00 0.00 0.00 3.01
5132 6209 3.594134 CAGTCCATCAGAGTTCAAGTCC 58.406 50.000 0.00 0.00 0.00 3.85
5133 6210 3.260380 CAGTCCATCAGAGTTCAAGTCCT 59.740 47.826 0.00 0.00 0.00 3.85
5134 6211 4.464244 CAGTCCATCAGAGTTCAAGTCCTA 59.536 45.833 0.00 0.00 0.00 2.94
5135 6212 4.709397 AGTCCATCAGAGTTCAAGTCCTAG 59.291 45.833 0.00 0.00 0.00 3.02
5136 6213 4.707448 GTCCATCAGAGTTCAAGTCCTAGA 59.293 45.833 0.00 0.00 0.00 2.43
5137 6214 4.707448 TCCATCAGAGTTCAAGTCCTAGAC 59.293 45.833 0.00 0.00 0.00 2.59
5138 6215 4.709397 CCATCAGAGTTCAAGTCCTAGACT 59.291 45.833 0.00 0.00 45.64 3.24
5147 6224 1.765230 AGTCCTAGACTTAGCACCGG 58.235 55.000 0.00 0.00 40.28 5.28
5148 6225 1.005687 AGTCCTAGACTTAGCACCGGT 59.994 52.381 0.00 0.00 40.28 5.28
5149 6226 1.134560 GTCCTAGACTTAGCACCGGTG 59.865 57.143 30.66 30.66 0.00 4.94
5150 6227 0.460311 CCTAGACTTAGCACCGGTGG 59.540 60.000 34.58 20.63 0.00 4.61
5151 6228 1.183549 CTAGACTTAGCACCGGTGGT 58.816 55.000 38.36 38.36 44.31 4.16
5152 6229 1.134560 CTAGACTTAGCACCGGTGGTC 59.865 57.143 40.28 31.81 41.96 4.02
5153 6230 1.445582 GACTTAGCACCGGTGGTCG 60.446 63.158 40.28 31.72 41.96 4.79
5154 6231 2.813908 CTTAGCACCGGTGGTCGC 60.814 66.667 40.28 23.98 41.96 5.19
5155 6232 3.583276 CTTAGCACCGGTGGTCGCA 62.583 63.158 40.28 22.57 41.96 5.10
5156 6233 3.166490 TTAGCACCGGTGGTCGCAA 62.166 57.895 40.28 26.84 41.96 4.85
5157 6234 2.457743 TTAGCACCGGTGGTCGCAAT 62.458 55.000 40.28 11.79 41.96 3.56
5158 6235 2.845752 TAGCACCGGTGGTCGCAATC 62.846 60.000 40.28 18.74 41.96 2.67
5159 6236 2.047274 CACCGGTGGTCGCAATCT 60.047 61.111 27.57 0.00 37.59 2.40
5160 6237 1.216977 CACCGGTGGTCGCAATCTA 59.783 57.895 27.57 0.00 37.59 1.98
5161 6238 0.179084 CACCGGTGGTCGCAATCTAT 60.179 55.000 27.57 0.00 37.59 1.98
5162 6239 0.179084 ACCGGTGGTCGCAATCTATG 60.179 55.000 6.12 0.00 37.59 2.23
5163 6240 0.880278 CCGGTGGTCGCAATCTATGG 60.880 60.000 0.00 0.00 37.59 2.74
5164 6241 1.498865 CGGTGGTCGCAATCTATGGC 61.499 60.000 0.00 0.00 0.00 4.40
5165 6242 0.463654 GGTGGTCGCAATCTATGGCA 60.464 55.000 0.00 0.00 0.00 4.92
5166 6243 1.597742 GTGGTCGCAATCTATGGCAT 58.402 50.000 4.88 4.88 0.00 4.40
5167 6244 1.949525 GTGGTCGCAATCTATGGCATT 59.050 47.619 4.78 0.00 0.00 3.56
5168 6245 2.358898 GTGGTCGCAATCTATGGCATTT 59.641 45.455 4.78 0.00 0.00 2.32
5169 6246 3.023119 TGGTCGCAATCTATGGCATTTT 58.977 40.909 4.78 0.00 0.00 1.82
5170 6247 3.181488 TGGTCGCAATCTATGGCATTTTG 60.181 43.478 4.78 9.02 0.00 2.44
5171 6248 3.181487 GGTCGCAATCTATGGCATTTTGT 60.181 43.478 4.78 0.00 0.00 2.83
5172 6249 3.792956 GTCGCAATCTATGGCATTTTGTG 59.207 43.478 4.78 13.76 0.00 3.33
5173 6250 3.117794 CGCAATCTATGGCATTTTGTGG 58.882 45.455 4.78 1.70 0.00 4.17
5174 6251 3.460103 GCAATCTATGGCATTTTGTGGG 58.540 45.455 4.78 0.00 0.00 4.61
5175 6252 3.742013 GCAATCTATGGCATTTTGTGGGG 60.742 47.826 4.78 0.00 0.00 4.96
5176 6253 2.917713 TCTATGGCATTTTGTGGGGT 57.082 45.000 4.78 0.00 0.00 4.95
5177 6254 2.455557 TCTATGGCATTTTGTGGGGTG 58.544 47.619 4.78 0.00 0.00 4.61
5178 6255 0.901124 TATGGCATTTTGTGGGGTGC 59.099 50.000 4.78 0.00 36.88 5.01
5179 6256 0.837260 ATGGCATTTTGTGGGGTGCT 60.837 50.000 0.00 0.00 37.70 4.40
5180 6257 1.293179 GGCATTTTGTGGGGTGCTC 59.707 57.895 0.00 0.00 37.70 4.26
5181 6258 1.470996 GGCATTTTGTGGGGTGCTCA 61.471 55.000 0.00 0.00 37.70 4.26
5182 6259 0.609662 GCATTTTGTGGGGTGCTCAT 59.390 50.000 0.00 0.00 34.85 2.90
5183 6260 1.824230 GCATTTTGTGGGGTGCTCATA 59.176 47.619 0.00 0.00 34.85 2.15
5184 6261 2.159198 GCATTTTGTGGGGTGCTCATAG 60.159 50.000 0.00 0.00 34.85 2.23
5185 6262 3.355378 CATTTTGTGGGGTGCTCATAGA 58.645 45.455 0.00 0.00 0.00 1.98
5186 6263 2.787473 TTTGTGGGGTGCTCATAGAG 57.213 50.000 0.00 0.00 0.00 2.43
5187 6264 1.951209 TTGTGGGGTGCTCATAGAGA 58.049 50.000 0.00 0.00 0.00 3.10
5188 6265 2.180946 TGTGGGGTGCTCATAGAGAT 57.819 50.000 0.00 0.00 0.00 2.75
5189 6266 3.328535 TGTGGGGTGCTCATAGAGATA 57.671 47.619 0.00 0.00 0.00 1.98
5190 6267 3.234353 TGTGGGGTGCTCATAGAGATAG 58.766 50.000 0.00 0.00 0.00 2.08
5191 6268 2.564947 GTGGGGTGCTCATAGAGATAGG 59.435 54.545 0.00 0.00 0.00 2.57
5192 6269 2.183679 GGGGTGCTCATAGAGATAGGG 58.816 57.143 0.00 0.00 0.00 3.53
5193 6270 2.493687 GGGGTGCTCATAGAGATAGGGT 60.494 54.545 0.00 0.00 0.00 4.34
5194 6271 2.564947 GGGTGCTCATAGAGATAGGGTG 59.435 54.545 0.00 0.00 0.00 4.61
5195 6272 3.235200 GGTGCTCATAGAGATAGGGTGT 58.765 50.000 0.00 0.00 0.00 4.16
5196 6273 3.006323 GGTGCTCATAGAGATAGGGTGTG 59.994 52.174 0.00 0.00 0.00 3.82
5197 6274 2.630098 TGCTCATAGAGATAGGGTGTGC 59.370 50.000 0.00 0.00 0.00 4.57
5198 6275 2.028567 GCTCATAGAGATAGGGTGTGCC 60.029 54.545 0.00 0.00 0.00 5.01
5199 6276 2.230025 CTCATAGAGATAGGGTGTGCCG 59.770 54.545 0.00 0.00 34.97 5.69
5200 6277 1.964223 CATAGAGATAGGGTGTGCCGT 59.036 52.381 0.00 0.00 36.71 5.68
5201 6278 1.399714 TAGAGATAGGGTGTGCCGTG 58.600 55.000 0.00 0.00 34.32 4.94
5202 6279 0.614979 AGAGATAGGGTGTGCCGTGT 60.615 55.000 0.00 0.00 34.32 4.49
5203 6280 0.460284 GAGATAGGGTGTGCCGTGTG 60.460 60.000 0.00 0.00 34.32 3.82
5204 6281 1.192146 AGATAGGGTGTGCCGTGTGT 61.192 55.000 0.00 0.00 34.32 3.72
5205 6282 0.321298 GATAGGGTGTGCCGTGTGTT 60.321 55.000 0.00 0.00 34.32 3.32
5206 6283 0.321298 ATAGGGTGTGCCGTGTGTTC 60.321 55.000 0.00 0.00 34.32 3.18
5207 6284 1.687297 TAGGGTGTGCCGTGTGTTCA 61.687 55.000 0.00 0.00 34.32 3.18
5208 6285 1.896660 GGGTGTGCCGTGTGTTCAT 60.897 57.895 0.00 0.00 34.97 2.57
5209 6286 0.604243 GGGTGTGCCGTGTGTTCATA 60.604 55.000 0.00 0.00 34.97 2.15
5210 6287 1.231221 GGTGTGCCGTGTGTTCATAA 58.769 50.000 0.00 0.00 0.00 1.90
5211 6288 1.196808 GGTGTGCCGTGTGTTCATAAG 59.803 52.381 0.00 0.00 0.00 1.73
5212 6289 2.139917 GTGTGCCGTGTGTTCATAAGA 58.860 47.619 0.00 0.00 0.00 2.10
5213 6290 2.742053 GTGTGCCGTGTGTTCATAAGAT 59.258 45.455 0.00 0.00 0.00 2.40
5214 6291 3.188460 GTGTGCCGTGTGTTCATAAGATT 59.812 43.478 0.00 0.00 0.00 2.40
5215 6292 3.188254 TGTGCCGTGTGTTCATAAGATTG 59.812 43.478 0.00 0.00 0.00 2.67
5216 6293 3.435327 GTGCCGTGTGTTCATAAGATTGA 59.565 43.478 0.00 0.00 0.00 2.57
5217 6294 3.684305 TGCCGTGTGTTCATAAGATTGAG 59.316 43.478 0.00 0.00 0.00 3.02
5218 6295 3.684788 GCCGTGTGTTCATAAGATTGAGT 59.315 43.478 0.00 0.00 0.00 3.41
5219 6296 4.436050 GCCGTGTGTTCATAAGATTGAGTG 60.436 45.833 0.00 0.00 0.00 3.51
5220 6297 4.690748 CCGTGTGTTCATAAGATTGAGTGT 59.309 41.667 0.00 0.00 0.00 3.55
5221 6298 5.867174 CCGTGTGTTCATAAGATTGAGTGTA 59.133 40.000 0.00 0.00 0.00 2.90
5222 6299 6.535150 CCGTGTGTTCATAAGATTGAGTGTAT 59.465 38.462 0.00 0.00 0.00 2.29
5223 6300 7.394099 CGTGTGTTCATAAGATTGAGTGTATG 58.606 38.462 0.00 0.00 0.00 2.39
5224 6301 7.063426 CGTGTGTTCATAAGATTGAGTGTATGT 59.937 37.037 0.00 0.00 0.00 2.29
5225 6302 8.171196 GTGTGTTCATAAGATTGAGTGTATGTG 58.829 37.037 0.00 0.00 0.00 3.21
5226 6303 7.148423 TGTGTTCATAAGATTGAGTGTATGTGC 60.148 37.037 0.00 0.00 0.00 4.57
5227 6304 6.035975 TGTTCATAAGATTGAGTGTATGTGCG 59.964 38.462 0.00 0.00 0.00 5.34
5228 6305 5.660460 TCATAAGATTGAGTGTATGTGCGT 58.340 37.500 0.00 0.00 0.00 5.24
5229 6306 5.519927 TCATAAGATTGAGTGTATGTGCGTG 59.480 40.000 0.00 0.00 0.00 5.34
5230 6307 3.592898 AGATTGAGTGTATGTGCGTGA 57.407 42.857 0.00 0.00 0.00 4.35
5231 6308 3.925379 AGATTGAGTGTATGTGCGTGAA 58.075 40.909 0.00 0.00 0.00 3.18
5232 6309 4.314961 AGATTGAGTGTATGTGCGTGAAA 58.685 39.130 0.00 0.00 0.00 2.69
5233 6310 4.389992 AGATTGAGTGTATGTGCGTGAAAG 59.610 41.667 0.00 0.00 0.00 2.62
5234 6311 3.378911 TGAGTGTATGTGCGTGAAAGA 57.621 42.857 0.00 0.00 0.00 2.52
5235 6312 3.723260 TGAGTGTATGTGCGTGAAAGAA 58.277 40.909 0.00 0.00 0.00 2.52
5236 6313 4.314961 TGAGTGTATGTGCGTGAAAGAAT 58.685 39.130 0.00 0.00 0.00 2.40
5237 6314 5.474825 TGAGTGTATGTGCGTGAAAGAATA 58.525 37.500 0.00 0.00 0.00 1.75
5238 6315 5.929415 TGAGTGTATGTGCGTGAAAGAATAA 59.071 36.000 0.00 0.00 0.00 1.40
5239 6316 6.128661 TGAGTGTATGTGCGTGAAAGAATAAC 60.129 38.462 0.00 0.00 0.00 1.89
5240 6317 5.013236 GTGTATGTGCGTGAAAGAATAACG 58.987 41.667 0.00 0.00 40.22 3.18
5241 6318 3.740044 ATGTGCGTGAAAGAATAACGG 57.260 42.857 0.00 0.00 37.77 4.44
5242 6319 2.756829 TGTGCGTGAAAGAATAACGGA 58.243 42.857 0.00 0.00 37.77 4.69
5243 6320 3.132160 TGTGCGTGAAAGAATAACGGAA 58.868 40.909 0.00 0.00 39.36 4.30
5244 6321 3.560481 TGTGCGTGAAAGAATAACGGAAA 59.440 39.130 0.00 0.00 39.36 3.13
5245 6322 4.214545 TGTGCGTGAAAGAATAACGGAAAT 59.785 37.500 0.00 0.00 39.36 2.17
5246 6323 5.408909 TGTGCGTGAAAGAATAACGGAAATA 59.591 36.000 0.00 0.00 39.36 1.40
5247 6324 5.731263 GTGCGTGAAAGAATAACGGAAATAC 59.269 40.000 0.00 0.00 39.36 1.89
5248 6325 4.953814 GCGTGAAAGAATAACGGAAATACG 59.046 41.667 0.00 0.00 37.77 3.06
5249 6326 5.220265 GCGTGAAAGAATAACGGAAATACGA 60.220 40.000 0.00 0.00 37.77 3.43
5250 6327 6.670452 GCGTGAAAGAATAACGGAAATACGAA 60.670 38.462 0.00 0.00 37.77 3.85
5251 6328 7.396419 CGTGAAAGAATAACGGAAATACGAAT 58.604 34.615 0.00 0.00 37.61 3.34
5252 6329 8.533965 CGTGAAAGAATAACGGAAATACGAATA 58.466 33.333 0.00 0.00 37.61 1.75
5263 6340 5.349809 GGAAATACGAATATCCGGATCTCC 58.650 45.833 23.08 9.91 30.71 3.71
5264 6341 5.127356 GGAAATACGAATATCCGGATCTCCT 59.873 44.000 23.08 11.11 30.71 3.69
5265 6342 5.584253 AATACGAATATCCGGATCTCCTG 57.416 43.478 23.08 10.95 30.71 3.86
5266 6343 2.171840 ACGAATATCCGGATCTCCTGG 58.828 52.381 23.08 9.27 0.00 4.45
5267 6344 1.478510 CGAATATCCGGATCTCCTGGG 59.521 57.143 23.08 2.73 32.84 4.45
5268 6345 1.208293 GAATATCCGGATCTCCTGGGC 59.792 57.143 23.08 0.00 32.84 5.36
5269 6346 0.972983 ATATCCGGATCTCCTGGGCG 60.973 60.000 23.08 0.00 32.84 6.13
5270 6347 2.076597 TATCCGGATCTCCTGGGCGA 62.077 60.000 23.08 0.00 32.84 5.54
5271 6348 3.610669 CCGGATCTCCTGGGCGAG 61.611 72.222 0.00 0.00 0.00 5.03
5272 6349 3.610669 CGGATCTCCTGGGCGAGG 61.611 72.222 9.61 9.61 44.45 4.63
5278 6355 4.932060 TCCTGGGCGAGGAGATAG 57.068 61.111 14.88 0.00 46.96 2.08
5279 6356 1.931296 TCCTGGGCGAGGAGATAGT 59.069 57.895 14.88 0.00 46.96 2.12
5280 6357 1.146452 TCCTGGGCGAGGAGATAGTA 58.854 55.000 14.88 0.00 46.96 1.82
5281 6358 1.074084 TCCTGGGCGAGGAGATAGTAG 59.926 57.143 14.88 0.00 46.96 2.57
5282 6359 1.074084 CCTGGGCGAGGAGATAGTAGA 59.926 57.143 10.44 0.00 46.33 2.59
5283 6360 2.291282 CCTGGGCGAGGAGATAGTAGAT 60.291 54.545 10.44 0.00 46.33 1.98
5284 6361 2.752354 CTGGGCGAGGAGATAGTAGATG 59.248 54.545 0.00 0.00 0.00 2.90
5285 6362 2.108425 TGGGCGAGGAGATAGTAGATGT 59.892 50.000 0.00 0.00 0.00 3.06
5286 6363 2.490115 GGGCGAGGAGATAGTAGATGTG 59.510 54.545 0.00 0.00 0.00 3.21
5287 6364 2.094957 GGCGAGGAGATAGTAGATGTGC 60.095 54.545 0.00 0.00 0.00 4.57
5288 6365 2.817258 GCGAGGAGATAGTAGATGTGCT 59.183 50.000 0.00 0.00 0.00 4.40
5289 6366 3.254657 GCGAGGAGATAGTAGATGTGCTT 59.745 47.826 0.00 0.00 0.00 3.91
5290 6367 4.793071 CGAGGAGATAGTAGATGTGCTTG 58.207 47.826 0.00 0.00 0.00 4.01
5291 6368 4.277174 CGAGGAGATAGTAGATGTGCTTGT 59.723 45.833 0.00 0.00 0.00 3.16
5292 6369 5.527951 GAGGAGATAGTAGATGTGCTTGTG 58.472 45.833 0.00 0.00 0.00 3.33
5293 6370 5.204292 AGGAGATAGTAGATGTGCTTGTGA 58.796 41.667 0.00 0.00 0.00 3.58
5294 6371 5.301551 AGGAGATAGTAGATGTGCTTGTGAG 59.698 44.000 0.00 0.00 0.00 3.51
5295 6372 5.508825 GGAGATAGTAGATGTGCTTGTGAGG 60.509 48.000 0.00 0.00 0.00 3.86
5296 6373 2.393271 AGTAGATGTGCTTGTGAGGC 57.607 50.000 0.00 0.00 0.00 4.70
5297 6374 1.065854 AGTAGATGTGCTTGTGAGGCC 60.066 52.381 0.00 0.00 0.00 5.19
5298 6375 0.108186 TAGATGTGCTTGTGAGGCCG 60.108 55.000 0.00 0.00 0.00 6.13
5299 6376 2.360350 ATGTGCTTGTGAGGCCGG 60.360 61.111 0.00 0.00 0.00 6.13
5322 6399 3.053896 GGTTGCCCGTGTAGCCAC 61.054 66.667 0.00 0.00 38.27 5.01
5323 6400 2.032071 GTTGCCCGTGTAGCCACT 59.968 61.111 0.00 0.00 39.55 4.00
5324 6401 1.294138 GTTGCCCGTGTAGCCACTA 59.706 57.895 0.00 0.00 39.55 2.74
5325 6402 0.739813 GTTGCCCGTGTAGCCACTAG 60.740 60.000 0.00 0.00 39.55 2.57
5326 6403 2.202892 GCCCGTGTAGCCACTAGC 60.203 66.667 0.00 0.00 39.55 3.42
5327 6404 2.499685 CCCGTGTAGCCACTAGCC 59.500 66.667 0.00 0.00 45.47 3.93
5332 6409 2.586357 GTAGCCACTAGCCAGCGC 60.586 66.667 0.00 0.00 45.47 5.92
5340 6417 3.932580 CTAGCCAGCGCCGTGAACA 62.933 63.158 2.29 0.00 34.57 3.18
5381 6470 1.168714 GTTGAACTTGGCAGGCTAGG 58.831 55.000 10.15 0.00 0.00 3.02
5399 6488 1.415672 GGTGTCTGGAAGGTGGACCA 61.416 60.000 0.00 0.00 38.89 4.02
5402 6494 3.081554 CTGGAAGGTGGACCAGGG 58.918 66.667 0.00 0.00 46.76 4.45
5586 6679 1.208293 GATCGGAACTCTTCTGCCCTT 59.792 52.381 0.00 0.00 35.98 3.95
5587 6680 0.321671 TCGGAACTCTTCTGCCCTTG 59.678 55.000 0.00 0.00 35.98 3.61
5588 6681 1.301677 CGGAACTCTTCTGCCCTTGC 61.302 60.000 0.00 0.00 38.26 4.01
5589 6682 0.962855 GGAACTCTTCTGCCCTTGCC 60.963 60.000 0.00 0.00 36.33 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 3.255395 TGTTTCATGTGCGTGAATGGAAT 59.745 39.130 7.55 0.00 37.88 3.01
22 23 5.105063 TCAATTTTGTTTCATGTGCGTGAA 58.895 33.333 2.98 2.98 36.38 3.18
56 58 5.136828 TCCTATTTGTTTCATGTGTGTGGT 58.863 37.500 0.00 0.00 0.00 4.16
117 123 3.498774 ACACTTGCCTGTCTCTGAAAT 57.501 42.857 0.00 0.00 0.00 2.17
329 345 1.738346 CTGGGATCTGACGCGGATCA 61.738 60.000 20.50 11.70 45.24 2.92
334 350 1.953138 GATGCTGGGATCTGACGCG 60.953 63.158 3.53 3.53 0.00 6.01
526 565 1.596752 ATCACGCGCAACTGACCAA 60.597 52.632 5.73 0.00 0.00 3.67
1060 1105 4.097361 GGGGACGGAACTGGGAGC 62.097 72.222 0.00 0.00 0.00 4.70
1203 1251 4.806339 CCTTCCTCCTCCCCCGCT 62.806 72.222 0.00 0.00 0.00 5.52
1218 1269 1.218316 GTTGAACGCCGGATCTCCT 59.782 57.895 5.05 0.00 0.00 3.69
1224 1275 4.238654 AACGGGTTGAACGCCGGA 62.239 61.111 22.62 0.00 36.63 5.14
1350 1403 4.401925 CAGAAGGTTCAACCAAGAGGAAT 58.598 43.478 9.90 0.00 41.95 3.01
1360 1413 0.312102 GCACAGCCAGAAGGTTCAAC 59.688 55.000 0.00 0.00 37.19 3.18
1365 1418 0.751643 AAAACGCACAGCCAGAAGGT 60.752 50.000 0.00 0.00 37.19 3.50
1372 1425 1.442688 GCAGCTAAAACGCACAGCC 60.443 57.895 0.00 0.00 35.88 4.85
1469 1531 3.948735 GAACCATCGAAACTCCCCA 57.051 52.632 0.00 0.00 0.00 4.96
1624 1720 7.232534 AGGTCTGCCACACTTTTTCATAAATAA 59.767 33.333 0.00 0.00 37.19 1.40
1778 1888 0.866906 CGCAGCACACACAAAACCTG 60.867 55.000 0.00 0.00 0.00 4.00
1784 1899 1.024046 ACAGAACGCAGCACACACAA 61.024 50.000 0.00 0.00 0.00 3.33
2118 2517 0.319813 GCTGGAATGGTTGGTTGCAC 60.320 55.000 0.00 0.00 0.00 4.57
2292 2721 7.604927 TGCGTCTTTGGTTAGTTTTATAGACAT 59.395 33.333 0.00 0.00 32.40 3.06
2437 2898 2.833943 ACTTCCATGGCAAGGATTTTCC 59.166 45.455 12.90 0.00 34.56 3.13
2722 3191 7.358352 CGATTTGAGCTGTTTAAATGTTTGGAC 60.358 37.037 0.00 0.00 0.00 4.02
2742 3211 7.359595 TCCAAGTCAATTTAGTTGTCGATTTG 58.640 34.615 6.48 0.00 38.95 2.32
2748 3217 6.691388 GTGTGTTCCAAGTCAATTTAGTTGTC 59.309 38.462 6.48 0.00 38.95 3.18
2821 3290 7.973388 CGCAAAATAAGACCCAATAGATGAAAA 59.027 33.333 0.00 0.00 0.00 2.29
2834 3303 4.449743 TCACACTGTACGCAAAATAAGACC 59.550 41.667 0.00 0.00 0.00 3.85
2846 3315 7.003648 CGCAATAAATATCATCACACTGTACG 58.996 38.462 0.00 0.00 0.00 3.67
3209 3699 4.332819 ACGGAAGTTGTTCTCTTGTTTCAG 59.667 41.667 0.00 0.00 46.40 3.02
3387 3878 4.202398 CCAGGTGCACCACTTGATAGATAT 60.202 45.833 36.39 9.21 42.78 1.63
3437 3928 9.783256 ATAGAAAATGAACGTAATAAAACCAGC 57.217 29.630 0.00 0.00 0.00 4.85
3456 3947 8.862325 TTTTCATGCCTAGAGACAATAGAAAA 57.138 30.769 0.00 0.00 0.00 2.29
3512 4003 8.642908 ACTTGTATTCCTTTTGTTAGCAAAAC 57.357 30.769 12.80 4.70 46.12 2.43
3522 4013 8.364142 TCCCATGTAAAACTTGTATTCCTTTTG 58.636 33.333 0.00 0.00 0.00 2.44
3550 4041 6.405538 CAAAGCATGTTAAATAATGGGTGGT 58.594 36.000 0.00 0.00 0.00 4.16
3555 4046 9.651913 AAGTTACCAAAGCATGTTAAATAATGG 57.348 29.630 0.00 0.00 0.00 3.16
3587 4079 0.392998 ACGATGCATGGGTTCAGGTC 60.393 55.000 13.62 0.00 0.00 3.85
3619 4118 6.323996 CGAGGGGAAGGCATGAGTATATATAA 59.676 42.308 0.00 0.00 0.00 0.98
3681 4180 5.841237 AGCTTTCCAGATAGCAGGATAGTTA 59.159 40.000 10.65 0.00 37.76 2.24
3748 4247 8.252624 AGGAAAGTACTTGGATAAGATAGTCC 57.747 38.462 9.34 7.60 37.36 3.85
3921 4614 9.152595 CAGAACTAGTAATTTGGAAGTCTAACC 57.847 37.037 0.00 0.00 0.00 2.85
3941 4634 2.427095 GGTTGCCAAACAAGTCAGAACT 59.573 45.455 0.00 0.00 39.50 3.01
3942 4635 2.427095 AGGTTGCCAAACAAGTCAGAAC 59.573 45.455 0.00 0.00 39.50 3.01
3946 4639 3.764434 TGTTAAGGTTGCCAAACAAGTCA 59.236 39.130 0.00 0.00 39.50 3.41
3949 4642 5.200368 AGATGTTAAGGTTGCCAAACAAG 57.800 39.130 0.00 0.00 39.50 3.16
3961 4654 9.442047 AAGAAATACAAGAGTGAGATGTTAAGG 57.558 33.333 0.00 0.00 0.00 2.69
3983 4676 7.332926 TCAAGCAATGCTACAAAAACAAAAGAA 59.667 29.630 8.68 0.00 38.25 2.52
3990 4687 4.746611 AGCTTCAAGCAATGCTACAAAAAC 59.253 37.500 13.10 0.00 45.56 2.43
3993 4690 3.858129 GCAGCTTCAAGCAATGCTACAAA 60.858 43.478 13.10 2.42 45.56 2.83
3994 4691 2.352030 GCAGCTTCAAGCAATGCTACAA 60.352 45.455 13.10 3.27 45.56 2.41
3995 4692 1.200716 GCAGCTTCAAGCAATGCTACA 59.799 47.619 13.10 0.00 45.56 2.74
3996 4693 1.792993 CGCAGCTTCAAGCAATGCTAC 60.793 52.381 18.53 0.00 45.56 3.58
4004 4701 1.642952 CCTTCCTCGCAGCTTCAAGC 61.643 60.000 0.00 0.00 42.84 4.01
4016 4713 4.221482 ACATCTTGAAAATTGGCCTTCCTC 59.779 41.667 3.32 0.00 0.00 3.71
4090 4787 9.830975 AGCCTGTCTGTTTTAATTAATTGTTTT 57.169 25.926 11.05 0.00 0.00 2.43
4123 4820 1.337823 ACTACACCAAGCCTTGCGTAG 60.338 52.381 21.39 21.39 39.27 3.51
4234 4934 2.486472 AGATGGTTTCAGCACAGGAG 57.514 50.000 0.00 0.00 0.00 3.69
4236 4936 2.486982 CAGAAGATGGTTTCAGCACAGG 59.513 50.000 0.00 0.00 0.00 4.00
4266 4966 2.647297 GTTTGTCCCAGCTGCAGC 59.353 61.111 31.53 31.53 42.49 5.25
4330 5030 4.553330 TTTCTTGAACTCCTCGGCTATT 57.447 40.909 0.00 0.00 0.00 1.73
4447 5147 1.608025 GGAGCAGGACACAAATCGACA 60.608 52.381 0.00 0.00 0.00 4.35
4515 5221 2.749776 CCGGGATGGTTTTGTTGTTTC 58.250 47.619 0.00 0.00 0.00 2.78
4604 5317 4.719773 ACACAGTGTATGGTACCCATGTAT 59.280 41.667 10.07 0.00 44.84 2.29
4649 5362 7.670009 ACAATCTAGTATAACGCGTCTAGAT 57.330 36.000 28.74 28.74 45.92 1.98
4701 5505 1.886313 CTCTGGCCTGCATAGCACG 60.886 63.158 3.32 1.72 33.79 5.34
4768 5730 3.543680 AACCTTGTATGATGACCTCCG 57.456 47.619 0.00 0.00 0.00 4.63
4857 5823 7.114388 CGTATACATACATTTACTCGCACACAT 59.886 37.037 3.32 0.00 32.87 3.21
4861 5827 6.183359 CGTCGTATACATACATTTACTCGCAC 60.183 42.308 3.32 0.00 32.87 5.34
4881 5946 0.532573 ACTGAAGATCATGCCGTCGT 59.467 50.000 0.00 0.00 0.00 4.34
4882 5947 1.645034 AACTGAAGATCATGCCGTCG 58.355 50.000 0.00 0.00 0.00 5.12
4909 5986 2.812011 GGTTCAAGTGAATAACCGCACT 59.188 45.455 0.00 0.00 46.59 4.40
4914 5991 5.390613 CAATGTCGGTTCAAGTGAATAACC 58.609 41.667 0.00 0.00 39.44 2.85
4921 5998 0.240945 GGGCAATGTCGGTTCAAGTG 59.759 55.000 0.00 0.00 0.00 3.16
4927 6004 0.620556 AGATGAGGGCAATGTCGGTT 59.379 50.000 0.00 0.00 0.00 4.44
4928 6005 0.107508 CAGATGAGGGCAATGTCGGT 60.108 55.000 0.00 0.00 0.00 4.69
4929 6006 0.107508 ACAGATGAGGGCAATGTCGG 60.108 55.000 0.00 0.00 0.00 4.79
4934 6011 1.911357 TCTGACACAGATGAGGGCAAT 59.089 47.619 0.00 0.00 35.39 3.56
4935 6012 1.351076 TCTGACACAGATGAGGGCAA 58.649 50.000 0.00 0.00 35.39 4.52
4936 6013 1.351076 TTCTGACACAGATGAGGGCA 58.649 50.000 2.30 0.00 40.39 5.36
4938 6015 3.332919 CAGTTTCTGACACAGATGAGGG 58.667 50.000 2.30 0.00 40.39 4.30
4939 6016 2.740981 GCAGTTTCTGACACAGATGAGG 59.259 50.000 2.30 0.00 40.39 3.86
4940 6017 3.396560 TGCAGTTTCTGACACAGATGAG 58.603 45.455 2.30 0.00 40.39 2.90
4941 6018 3.473923 TGCAGTTTCTGACACAGATGA 57.526 42.857 2.30 0.00 40.39 2.92
4942 6019 4.761235 AATGCAGTTTCTGACACAGATG 57.239 40.909 2.30 0.32 40.39 2.90
4943 6020 5.508489 CCAAAATGCAGTTTCTGACACAGAT 60.508 40.000 9.56 0.00 40.39 2.90
4944 6021 4.202040 CCAAAATGCAGTTTCTGACACAGA 60.202 41.667 9.56 0.00 38.87 3.41
4945 6022 4.046462 CCAAAATGCAGTTTCTGACACAG 58.954 43.478 9.56 0.00 32.44 3.66
4946 6023 3.737663 GCCAAAATGCAGTTTCTGACACA 60.738 43.478 9.56 0.00 32.44 3.72
4947 6024 2.796593 GCCAAAATGCAGTTTCTGACAC 59.203 45.455 9.56 0.00 32.44 3.67
4948 6025 2.429971 TGCCAAAATGCAGTTTCTGACA 59.570 40.909 9.56 2.97 36.04 3.58
4949 6026 3.096489 TGCCAAAATGCAGTTTCTGAC 57.904 42.857 9.56 0.31 36.04 3.51
4950 6027 4.059511 CAATGCCAAAATGCAGTTTCTGA 58.940 39.130 9.56 0.00 45.93 3.27
4951 6028 3.187637 CCAATGCCAAAATGCAGTTTCTG 59.812 43.478 9.56 5.29 45.93 3.02
4952 6029 3.181452 ACCAATGCCAAAATGCAGTTTCT 60.181 39.130 9.56 0.00 45.93 2.52
4953 6030 3.140623 ACCAATGCCAAAATGCAGTTTC 58.859 40.909 9.56 0.02 45.93 2.78
4954 6031 3.211718 ACCAATGCCAAAATGCAGTTT 57.788 38.095 6.26 6.26 45.93 2.66
4955 6032 2.879646 CAACCAATGCCAAAATGCAGTT 59.120 40.909 0.00 0.00 45.93 3.16
4956 6033 2.496111 CAACCAATGCCAAAATGCAGT 58.504 42.857 0.00 0.00 45.93 4.40
4957 6034 1.807742 CCAACCAATGCCAAAATGCAG 59.192 47.619 0.00 0.00 45.93 4.41
4958 6035 1.142465 ACCAACCAATGCCAAAATGCA 59.858 42.857 0.00 0.00 46.94 3.96
4961 6038 3.327464 AGCTAACCAACCAATGCCAAAAT 59.673 39.130 0.00 0.00 0.00 1.82
4962 6039 2.703007 AGCTAACCAACCAATGCCAAAA 59.297 40.909 0.00 0.00 0.00 2.44
4964 6041 1.892474 GAGCTAACCAACCAATGCCAA 59.108 47.619 0.00 0.00 0.00 4.52
4965 6042 1.544724 GAGCTAACCAACCAATGCCA 58.455 50.000 0.00 0.00 0.00 4.92
4967 6044 1.398390 CTCGAGCTAACCAACCAATGC 59.602 52.381 0.00 0.00 0.00 3.56
4968 6045 1.398390 GCTCGAGCTAACCAACCAATG 59.602 52.381 29.88 0.00 38.21 2.82
4969 6046 1.679032 GGCTCGAGCTAACCAACCAAT 60.679 52.381 34.46 0.00 41.70 3.16
4970 6047 0.321298 GGCTCGAGCTAACCAACCAA 60.321 55.000 34.46 0.00 41.70 3.67
4971 6048 1.192146 AGGCTCGAGCTAACCAACCA 61.192 55.000 34.46 0.00 41.70 3.67
4972 6049 0.460459 GAGGCTCGAGCTAACCAACC 60.460 60.000 34.46 16.71 41.70 3.77
4974 6051 0.614979 AGGAGGCTCGAGCTAACCAA 60.615 55.000 34.46 0.00 41.70 3.67
4975 6052 1.000486 AGGAGGCTCGAGCTAACCA 60.000 57.895 34.46 0.00 41.70 3.67
4977 6054 1.439644 CCAGGAGGCTCGAGCTAAC 59.560 63.158 34.46 23.64 41.70 2.34
4978 6055 3.941081 CCAGGAGGCTCGAGCTAA 58.059 61.111 34.46 0.00 41.70 3.09
5017 6094 3.588396 AGAGGTTATACCCGGTCCAAAAA 59.412 43.478 0.00 0.00 39.75 1.94
5018 6095 3.183801 AGAGGTTATACCCGGTCCAAAA 58.816 45.455 0.00 0.00 39.75 2.44
5019 6096 2.836667 AGAGGTTATACCCGGTCCAAA 58.163 47.619 0.00 0.00 39.75 3.28
5020 6097 2.555732 AGAGGTTATACCCGGTCCAA 57.444 50.000 0.00 0.00 39.75 3.53
5021 6098 2.555732 AAGAGGTTATACCCGGTCCA 57.444 50.000 0.00 0.00 39.75 4.02
5022 6099 2.103771 GGAAAGAGGTTATACCCGGTCC 59.896 54.545 0.00 0.00 39.75 4.46
5023 6100 2.767960 TGGAAAGAGGTTATACCCGGTC 59.232 50.000 0.00 0.00 39.75 4.79
5024 6101 2.836667 TGGAAAGAGGTTATACCCGGT 58.163 47.619 0.00 0.00 39.75 5.28
5025 6102 4.134563 CAATGGAAAGAGGTTATACCCGG 58.865 47.826 0.00 0.00 39.75 5.73
5026 6103 4.814771 GTCAATGGAAAGAGGTTATACCCG 59.185 45.833 0.00 0.00 39.75 5.28
5027 6104 5.823045 CAGTCAATGGAAAGAGGTTATACCC 59.177 44.000 0.00 0.00 39.75 3.69
5028 6105 6.650120 TCAGTCAATGGAAAGAGGTTATACC 58.350 40.000 0.00 0.00 38.99 2.73
5029 6106 8.738645 ATTCAGTCAATGGAAAGAGGTTATAC 57.261 34.615 0.00 0.00 0.00 1.47
5031 6108 9.178758 GTTATTCAGTCAATGGAAAGAGGTTAT 57.821 33.333 0.00 0.00 0.00 1.89
5032 6109 7.333423 CGTTATTCAGTCAATGGAAAGAGGTTA 59.667 37.037 0.00 0.00 0.00 2.85
5033 6110 6.149474 CGTTATTCAGTCAATGGAAAGAGGTT 59.851 38.462 0.00 0.00 0.00 3.50
5034 6111 5.643777 CGTTATTCAGTCAATGGAAAGAGGT 59.356 40.000 0.00 0.00 0.00 3.85
5035 6112 5.643777 ACGTTATTCAGTCAATGGAAAGAGG 59.356 40.000 0.00 0.00 0.00 3.69
5036 6113 6.727824 ACGTTATTCAGTCAATGGAAAGAG 57.272 37.500 0.00 0.00 0.00 2.85
5037 6114 8.610248 TTTACGTTATTCAGTCAATGGAAAGA 57.390 30.769 0.00 0.00 0.00 2.52
5040 6117 9.438228 TGTATTTACGTTATTCAGTCAATGGAA 57.562 29.630 0.00 0.00 0.00 3.53
5041 6118 9.093970 CTGTATTTACGTTATTCAGTCAATGGA 57.906 33.333 0.00 0.00 0.00 3.41
5042 6119 7.850982 GCTGTATTTACGTTATTCAGTCAATGG 59.149 37.037 14.15 0.00 0.00 3.16
5043 6120 8.387354 TGCTGTATTTACGTTATTCAGTCAATG 58.613 33.333 14.15 0.00 0.00 2.82
5044 6121 8.487313 TGCTGTATTTACGTTATTCAGTCAAT 57.513 30.769 14.15 0.00 0.00 2.57
5045 6122 7.892778 TGCTGTATTTACGTTATTCAGTCAA 57.107 32.000 14.15 3.75 0.00 3.18
5046 6123 7.892778 TTGCTGTATTTACGTTATTCAGTCA 57.107 32.000 14.15 11.11 0.00 3.41
5047 6124 8.440833 AGTTTGCTGTATTTACGTTATTCAGTC 58.559 33.333 14.15 9.53 0.00 3.51
5048 6125 8.319143 AGTTTGCTGTATTTACGTTATTCAGT 57.681 30.769 14.15 0.00 0.00 3.41
5053 6130 9.211485 ACACTTAGTTTGCTGTATTTACGTTAT 57.789 29.630 0.00 0.00 0.00 1.89
5054 6131 8.592105 ACACTTAGTTTGCTGTATTTACGTTA 57.408 30.769 0.00 0.00 0.00 3.18
5055 6132 7.486802 ACACTTAGTTTGCTGTATTTACGTT 57.513 32.000 0.00 0.00 0.00 3.99
5056 6133 7.148689 GCTACACTTAGTTTGCTGTATTTACGT 60.149 37.037 0.00 0.00 0.00 3.57
5057 6134 7.063074 AGCTACACTTAGTTTGCTGTATTTACG 59.937 37.037 3.41 0.00 37.41 3.18
5058 6135 8.252964 AGCTACACTTAGTTTGCTGTATTTAC 57.747 34.615 3.41 0.00 37.41 2.01
5059 6136 8.717821 CAAGCTACACTTAGTTTGCTGTATTTA 58.282 33.333 4.72 0.00 39.00 1.40
5060 6137 7.444183 TCAAGCTACACTTAGTTTGCTGTATTT 59.556 33.333 4.72 0.00 43.03 1.40
5061 6138 6.934645 TCAAGCTACACTTAGTTTGCTGTATT 59.065 34.615 4.72 0.00 43.03 1.89
5062 6139 6.464222 TCAAGCTACACTTAGTTTGCTGTAT 58.536 36.000 4.72 0.00 43.03 2.29
5063 6140 5.849510 TCAAGCTACACTTAGTTTGCTGTA 58.150 37.500 4.72 0.00 43.03 2.74
5064 6141 4.703897 TCAAGCTACACTTAGTTTGCTGT 58.296 39.130 4.72 0.00 43.03 4.40
5065 6142 5.391310 CCATCAAGCTACACTTAGTTTGCTG 60.391 44.000 4.72 4.85 43.03 4.41
5066 6143 4.697352 CCATCAAGCTACACTTAGTTTGCT 59.303 41.667 4.01 0.00 43.03 3.91
5067 6144 4.455877 ACCATCAAGCTACACTTAGTTTGC 59.544 41.667 4.01 0.00 43.03 3.68
5068 6145 6.560253 AACCATCAAGCTACACTTAGTTTG 57.440 37.500 0.00 2.76 44.09 2.93
5069 6146 6.879458 CCTAACCATCAAGCTACACTTAGTTT 59.121 38.462 0.00 0.00 36.04 2.66
5070 6147 6.013639 ACCTAACCATCAAGCTACACTTAGTT 60.014 38.462 0.00 0.00 36.04 2.24
5071 6148 5.484290 ACCTAACCATCAAGCTACACTTAGT 59.516 40.000 0.00 0.00 36.04 2.24
5072 6149 5.978814 ACCTAACCATCAAGCTACACTTAG 58.021 41.667 0.00 0.00 36.04 2.18
5073 6150 6.368779 AACCTAACCATCAAGCTACACTTA 57.631 37.500 0.00 0.00 36.04 2.24
5074 6151 4.910458 ACCTAACCATCAAGCTACACTT 57.090 40.909 0.00 0.00 40.05 3.16
5075 6152 4.910458 AACCTAACCATCAAGCTACACT 57.090 40.909 0.00 0.00 0.00 3.55
5076 6153 5.731591 AGTAACCTAACCATCAAGCTACAC 58.268 41.667 0.00 0.00 0.00 2.90
5077 6154 6.170506 CAAGTAACCTAACCATCAAGCTACA 58.829 40.000 0.00 0.00 0.00 2.74
5078 6155 6.171213 ACAAGTAACCTAACCATCAAGCTAC 58.829 40.000 0.00 0.00 0.00 3.58
5079 6156 6.368779 ACAAGTAACCTAACCATCAAGCTA 57.631 37.500 0.00 0.00 0.00 3.32
5080 6157 5.242795 ACAAGTAACCTAACCATCAAGCT 57.757 39.130 0.00 0.00 0.00 3.74
5081 6158 5.240844 ACAACAAGTAACCTAACCATCAAGC 59.759 40.000 0.00 0.00 0.00 4.01
5082 6159 6.293955 CCACAACAAGTAACCTAACCATCAAG 60.294 42.308 0.00 0.00 0.00 3.02
5083 6160 5.533154 CCACAACAAGTAACCTAACCATCAA 59.467 40.000 0.00 0.00 0.00 2.57
5084 6161 5.067273 CCACAACAAGTAACCTAACCATCA 58.933 41.667 0.00 0.00 0.00 3.07
5085 6162 5.310451 TCCACAACAAGTAACCTAACCATC 58.690 41.667 0.00 0.00 0.00 3.51
5086 6163 5.313280 TCCACAACAAGTAACCTAACCAT 57.687 39.130 0.00 0.00 0.00 3.55
5087 6164 4.774660 TCCACAACAAGTAACCTAACCA 57.225 40.909 0.00 0.00 0.00 3.67
5088 6165 4.276678 GGTTCCACAACAAGTAACCTAACC 59.723 45.833 0.00 0.00 36.39 2.85
5089 6166 4.883006 TGGTTCCACAACAAGTAACCTAAC 59.117 41.667 0.00 0.00 38.90 2.34
5090 6167 5.113446 TGGTTCCACAACAAGTAACCTAA 57.887 39.130 0.00 0.00 38.90 2.69
5091 6168 4.164604 ACTGGTTCCACAACAAGTAACCTA 59.835 41.667 0.00 0.00 43.97 3.08
5092 6169 3.053917 ACTGGTTCCACAACAAGTAACCT 60.054 43.478 0.00 0.00 43.97 3.50
5093 6170 3.284617 ACTGGTTCCACAACAAGTAACC 58.715 45.455 0.00 0.00 43.97 2.85
5094 6171 3.314357 GGACTGGTTCCACAACAAGTAAC 59.686 47.826 0.00 0.00 45.54 2.50
5095 6172 3.547746 GGACTGGTTCCACAACAAGTAA 58.452 45.455 0.00 0.00 45.54 2.24
5096 6173 3.202829 GGACTGGTTCCACAACAAGTA 57.797 47.619 0.00 0.00 45.54 2.24
5106 6183 2.303022 TGAACTCTGATGGACTGGTTCC 59.697 50.000 0.00 0.00 46.13 3.62
5107 6184 3.685139 TGAACTCTGATGGACTGGTTC 57.315 47.619 0.00 0.00 35.20 3.62
5108 6185 3.392616 ACTTGAACTCTGATGGACTGGTT 59.607 43.478 0.00 0.00 0.00 3.67
5109 6186 2.975489 ACTTGAACTCTGATGGACTGGT 59.025 45.455 0.00 0.00 0.00 4.00
5110 6187 3.594134 GACTTGAACTCTGATGGACTGG 58.406 50.000 0.00 0.00 0.00 4.00
5111 6188 3.260380 AGGACTTGAACTCTGATGGACTG 59.740 47.826 0.00 0.00 0.00 3.51
5112 6189 3.515562 AGGACTTGAACTCTGATGGACT 58.484 45.455 0.00 0.00 0.00 3.85
5113 6190 3.971245 AGGACTTGAACTCTGATGGAC 57.029 47.619 0.00 0.00 0.00 4.02
5114 6191 4.707448 GTCTAGGACTTGAACTCTGATGGA 59.293 45.833 0.00 0.00 0.00 3.41
5115 6192 4.709397 AGTCTAGGACTTGAACTCTGATGG 59.291 45.833 0.00 0.00 40.28 3.51
5116 6193 5.913137 AGTCTAGGACTTGAACTCTGATG 57.087 43.478 0.00 0.00 40.28 3.07
5128 6205 1.005687 ACCGGTGCTAAGTCTAGGACT 59.994 52.381 6.12 0.00 45.64 3.85
5129 6206 1.134560 CACCGGTGCTAAGTCTAGGAC 59.865 57.143 24.02 0.00 43.76 3.85
5130 6207 1.471119 CACCGGTGCTAAGTCTAGGA 58.529 55.000 24.02 0.00 0.00 2.94
5131 6208 0.460311 CCACCGGTGCTAAGTCTAGG 59.540 60.000 29.75 7.53 0.00 3.02
5132 6209 1.134560 GACCACCGGTGCTAAGTCTAG 59.865 57.143 29.75 14.24 35.25 2.43
5133 6210 1.180029 GACCACCGGTGCTAAGTCTA 58.820 55.000 29.75 0.00 35.25 2.59
5134 6211 1.874345 CGACCACCGGTGCTAAGTCT 61.874 60.000 29.75 4.13 35.25 3.24
5135 6212 1.445582 CGACCACCGGTGCTAAGTC 60.446 63.158 29.75 26.26 35.25 3.01
5136 6213 2.654877 CGACCACCGGTGCTAAGT 59.345 61.111 29.75 20.94 35.25 2.24
5137 6214 2.813908 GCGACCACCGGTGCTAAG 60.814 66.667 29.75 17.65 35.25 2.18
5138 6215 2.457743 ATTGCGACCACCGGTGCTAA 62.458 55.000 29.75 17.38 35.25 3.09
5139 6216 2.845752 GATTGCGACCACCGGTGCTA 62.846 60.000 29.75 14.98 35.25 3.49
5140 6217 4.329545 ATTGCGACCACCGGTGCT 62.330 61.111 29.75 16.83 35.25 4.40
5141 6218 2.845752 TAGATTGCGACCACCGGTGC 62.846 60.000 29.75 18.38 35.25 5.01
5142 6219 0.179084 ATAGATTGCGACCACCGGTG 60.179 55.000 28.26 28.26 35.25 4.94
5143 6220 0.179084 CATAGATTGCGACCACCGGT 60.179 55.000 0.00 0.00 39.44 5.28
5144 6221 0.880278 CCATAGATTGCGACCACCGG 60.880 60.000 0.00 0.00 39.04 5.28
5145 6222 1.498865 GCCATAGATTGCGACCACCG 61.499 60.000 0.00 0.00 42.21 4.94
5146 6223 0.463654 TGCCATAGATTGCGACCACC 60.464 55.000 0.00 0.00 0.00 4.61
5147 6224 1.597742 ATGCCATAGATTGCGACCAC 58.402 50.000 0.00 0.00 0.00 4.16
5148 6225 2.346766 AATGCCATAGATTGCGACCA 57.653 45.000 0.00 0.00 0.00 4.02
5149 6226 3.181487 ACAAAATGCCATAGATTGCGACC 60.181 43.478 0.00 0.00 0.00 4.79
5150 6227 3.792956 CACAAAATGCCATAGATTGCGAC 59.207 43.478 0.00 0.00 0.00 5.19
5151 6228 3.181488 CCACAAAATGCCATAGATTGCGA 60.181 43.478 0.00 0.00 0.00 5.10
5152 6229 3.117794 CCACAAAATGCCATAGATTGCG 58.882 45.455 0.00 0.00 0.00 4.85
5153 6230 3.460103 CCCACAAAATGCCATAGATTGC 58.540 45.455 0.00 0.00 0.00 3.56
5154 6231 3.451902 ACCCCACAAAATGCCATAGATTG 59.548 43.478 0.00 0.00 0.00 2.67
5155 6232 3.451902 CACCCCACAAAATGCCATAGATT 59.548 43.478 0.00 0.00 0.00 2.40
5156 6233 3.033184 CACCCCACAAAATGCCATAGAT 58.967 45.455 0.00 0.00 0.00 1.98
5157 6234 2.455557 CACCCCACAAAATGCCATAGA 58.544 47.619 0.00 0.00 0.00 1.98
5158 6235 1.134729 GCACCCCACAAAATGCCATAG 60.135 52.381 0.00 0.00 31.71 2.23
5159 6236 0.901124 GCACCCCACAAAATGCCATA 59.099 50.000 0.00 0.00 31.71 2.74
5160 6237 0.837260 AGCACCCCACAAAATGCCAT 60.837 50.000 0.00 0.00 38.92 4.40
5161 6238 1.459158 AGCACCCCACAAAATGCCA 60.459 52.632 0.00 0.00 38.92 4.92
5162 6239 1.293179 GAGCACCCCACAAAATGCC 59.707 57.895 0.00 0.00 38.92 4.40
5163 6240 0.609662 ATGAGCACCCCACAAAATGC 59.390 50.000 0.00 0.00 38.39 3.56
5164 6241 3.355378 TCTATGAGCACCCCACAAAATG 58.645 45.455 0.00 0.00 0.00 2.32
5165 6242 3.266772 TCTCTATGAGCACCCCACAAAAT 59.733 43.478 0.00 0.00 0.00 1.82
5166 6243 2.642311 TCTCTATGAGCACCCCACAAAA 59.358 45.455 0.00 0.00 0.00 2.44
5167 6244 2.265367 TCTCTATGAGCACCCCACAAA 58.735 47.619 0.00 0.00 0.00 2.83
5168 6245 1.951209 TCTCTATGAGCACCCCACAA 58.049 50.000 0.00 0.00 0.00 3.33
5169 6246 2.180946 ATCTCTATGAGCACCCCACA 57.819 50.000 0.00 0.00 0.00 4.17
5170 6247 2.564947 CCTATCTCTATGAGCACCCCAC 59.435 54.545 0.00 0.00 0.00 4.61
5171 6248 2.493500 CCCTATCTCTATGAGCACCCCA 60.494 54.545 0.00 0.00 0.00 4.96
5172 6249 2.183679 CCCTATCTCTATGAGCACCCC 58.816 57.143 0.00 0.00 0.00 4.95
5173 6250 2.564947 CACCCTATCTCTATGAGCACCC 59.435 54.545 0.00 0.00 0.00 4.61
5174 6251 3.006323 CACACCCTATCTCTATGAGCACC 59.994 52.174 0.00 0.00 0.00 5.01
5175 6252 3.553922 GCACACCCTATCTCTATGAGCAC 60.554 52.174 0.00 0.00 0.00 4.40
5176 6253 2.630098 GCACACCCTATCTCTATGAGCA 59.370 50.000 0.00 0.00 0.00 4.26
5177 6254 2.028567 GGCACACCCTATCTCTATGAGC 60.029 54.545 0.00 0.00 0.00 4.26
5178 6255 2.230025 CGGCACACCCTATCTCTATGAG 59.770 54.545 0.00 0.00 0.00 2.90
5179 6256 2.239400 CGGCACACCCTATCTCTATGA 58.761 52.381 0.00 0.00 0.00 2.15
5180 6257 1.964223 ACGGCACACCCTATCTCTATG 59.036 52.381 0.00 0.00 0.00 2.23
5181 6258 1.964223 CACGGCACACCCTATCTCTAT 59.036 52.381 0.00 0.00 0.00 1.98
5182 6259 1.341679 ACACGGCACACCCTATCTCTA 60.342 52.381 0.00 0.00 0.00 2.43
5183 6260 0.614979 ACACGGCACACCCTATCTCT 60.615 55.000 0.00 0.00 0.00 3.10
5184 6261 0.460284 CACACGGCACACCCTATCTC 60.460 60.000 0.00 0.00 0.00 2.75
5185 6262 1.192146 ACACACGGCACACCCTATCT 61.192 55.000 0.00 0.00 0.00 1.98
5186 6263 0.321298 AACACACGGCACACCCTATC 60.321 55.000 0.00 0.00 0.00 2.08
5187 6264 0.321298 GAACACACGGCACACCCTAT 60.321 55.000 0.00 0.00 0.00 2.57
5188 6265 1.070105 GAACACACGGCACACCCTA 59.930 57.895 0.00 0.00 0.00 3.53
5189 6266 2.203153 GAACACACGGCACACCCT 60.203 61.111 0.00 0.00 0.00 4.34
5190 6267 0.604243 TATGAACACACGGCACACCC 60.604 55.000 0.00 0.00 0.00 4.61
5191 6268 1.196808 CTTATGAACACACGGCACACC 59.803 52.381 0.00 0.00 0.00 4.16
5192 6269 2.139917 TCTTATGAACACACGGCACAC 58.860 47.619 0.00 0.00 0.00 3.82
5193 6270 2.535012 TCTTATGAACACACGGCACA 57.465 45.000 0.00 0.00 0.00 4.57
5194 6271 3.435327 TCAATCTTATGAACACACGGCAC 59.565 43.478 0.00 0.00 0.00 5.01
5195 6272 3.669536 TCAATCTTATGAACACACGGCA 58.330 40.909 0.00 0.00 0.00 5.69
5196 6273 3.684788 ACTCAATCTTATGAACACACGGC 59.315 43.478 0.00 0.00 0.00 5.68
5197 6274 4.690748 ACACTCAATCTTATGAACACACGG 59.309 41.667 0.00 0.00 0.00 4.94
5198 6275 5.845985 ACACTCAATCTTATGAACACACG 57.154 39.130 0.00 0.00 0.00 4.49
5199 6276 8.171196 CACATACACTCAATCTTATGAACACAC 58.829 37.037 0.00 0.00 0.00 3.82
5200 6277 7.148423 GCACATACACTCAATCTTATGAACACA 60.148 37.037 0.00 0.00 0.00 3.72
5201 6278 7.182761 GCACATACACTCAATCTTATGAACAC 58.817 38.462 0.00 0.00 0.00 3.32
5202 6279 6.035975 CGCACATACACTCAATCTTATGAACA 59.964 38.462 0.00 0.00 0.00 3.18
5203 6280 6.036083 ACGCACATACACTCAATCTTATGAAC 59.964 38.462 0.00 0.00 0.00 3.18
5204 6281 6.035975 CACGCACATACACTCAATCTTATGAA 59.964 38.462 0.00 0.00 0.00 2.57
5205 6282 5.519927 CACGCACATACACTCAATCTTATGA 59.480 40.000 0.00 0.00 0.00 2.15
5206 6283 5.519927 TCACGCACATACACTCAATCTTATG 59.480 40.000 0.00 0.00 0.00 1.90
5207 6284 5.660460 TCACGCACATACACTCAATCTTAT 58.340 37.500 0.00 0.00 0.00 1.73
5208 6285 5.066968 TCACGCACATACACTCAATCTTA 57.933 39.130 0.00 0.00 0.00 2.10
5209 6286 3.925379 TCACGCACATACACTCAATCTT 58.075 40.909 0.00 0.00 0.00 2.40
5210 6287 3.592898 TCACGCACATACACTCAATCT 57.407 42.857 0.00 0.00 0.00 2.40
5211 6288 4.388773 TCTTTCACGCACATACACTCAATC 59.611 41.667 0.00 0.00 0.00 2.67
5212 6289 4.314961 TCTTTCACGCACATACACTCAAT 58.685 39.130 0.00 0.00 0.00 2.57
5213 6290 3.723260 TCTTTCACGCACATACACTCAA 58.277 40.909 0.00 0.00 0.00 3.02
5214 6291 3.378911 TCTTTCACGCACATACACTCA 57.621 42.857 0.00 0.00 0.00 3.41
5215 6292 4.928661 ATTCTTTCACGCACATACACTC 57.071 40.909 0.00 0.00 0.00 3.51
5216 6293 5.163992 CGTTATTCTTTCACGCACATACACT 60.164 40.000 0.00 0.00 0.00 3.55
5217 6294 5.013236 CGTTATTCTTTCACGCACATACAC 58.987 41.667 0.00 0.00 0.00 2.90
5218 6295 4.092237 CCGTTATTCTTTCACGCACATACA 59.908 41.667 0.00 0.00 32.43 2.29
5219 6296 4.327898 TCCGTTATTCTTTCACGCACATAC 59.672 41.667 0.00 0.00 32.43 2.39
5220 6297 4.496360 TCCGTTATTCTTTCACGCACATA 58.504 39.130 0.00 0.00 32.43 2.29
5221 6298 3.331150 TCCGTTATTCTTTCACGCACAT 58.669 40.909 0.00 0.00 32.43 3.21
5222 6299 2.756829 TCCGTTATTCTTTCACGCACA 58.243 42.857 0.00 0.00 32.43 4.57
5223 6300 3.799137 TTCCGTTATTCTTTCACGCAC 57.201 42.857 0.00 0.00 32.43 5.34
5224 6301 5.444877 CGTATTTCCGTTATTCTTTCACGCA 60.445 40.000 0.00 0.00 32.43 5.24
5225 6302 4.953814 CGTATTTCCGTTATTCTTTCACGC 59.046 41.667 0.00 0.00 32.43 5.34
5226 6303 6.321873 TCGTATTTCCGTTATTCTTTCACG 57.678 37.500 0.00 0.00 0.00 4.35
5230 6307 8.706035 CGGATATTCGTATTTCCGTTATTCTTT 58.294 33.333 20.40 0.00 45.01 2.52
5231 6308 8.236084 CGGATATTCGTATTTCCGTTATTCTT 57.764 34.615 20.40 0.00 45.01 2.52
5232 6309 7.807687 CGGATATTCGTATTTCCGTTATTCT 57.192 36.000 20.40 0.00 45.01 2.40
5240 6317 5.127356 AGGAGATCCGGATATTCGTATTTCC 59.873 44.000 19.15 9.78 42.08 3.13
5241 6318 6.037098 CAGGAGATCCGGATATTCGTATTTC 58.963 44.000 19.15 0.95 42.08 2.17
5242 6319 5.105310 CCAGGAGATCCGGATATTCGTATTT 60.105 44.000 19.15 0.00 42.08 1.40
5243 6320 4.402793 CCAGGAGATCCGGATATTCGTATT 59.597 45.833 19.15 0.00 42.08 1.89
5244 6321 3.954904 CCAGGAGATCCGGATATTCGTAT 59.045 47.826 19.15 5.43 42.08 3.06
5245 6322 3.353557 CCAGGAGATCCGGATATTCGTA 58.646 50.000 19.15 0.00 42.08 3.43
5246 6323 2.171840 CCAGGAGATCCGGATATTCGT 58.828 52.381 19.15 16.26 42.08 3.85
5247 6324 1.478510 CCCAGGAGATCCGGATATTCG 59.521 57.143 19.15 9.44 42.08 3.34
5248 6325 1.208293 GCCCAGGAGATCCGGATATTC 59.792 57.143 19.15 14.10 42.08 1.75
5249 6326 1.280457 GCCCAGGAGATCCGGATATT 58.720 55.000 19.15 8.98 42.08 1.28
5250 6327 0.972983 CGCCCAGGAGATCCGGATAT 60.973 60.000 19.15 15.76 42.08 1.63
5251 6328 1.606601 CGCCCAGGAGATCCGGATA 60.607 63.158 19.15 0.00 42.08 2.59
5252 6329 2.919856 CGCCCAGGAGATCCGGAT 60.920 66.667 19.21 19.21 42.08 4.18
5253 6330 4.137615 TCGCCCAGGAGATCCGGA 62.138 66.667 6.61 6.61 42.08 5.14
5254 6331 3.610669 CTCGCCCAGGAGATCCGG 61.611 72.222 0.00 0.00 42.08 5.14
5262 6339 1.074084 TCTACTATCTCCTCGCCCAGG 59.926 57.143 0.00 0.00 45.15 4.45
5263 6340 2.570415 TCTACTATCTCCTCGCCCAG 57.430 55.000 0.00 0.00 0.00 4.45
5264 6341 2.108425 ACATCTACTATCTCCTCGCCCA 59.892 50.000 0.00 0.00 0.00 5.36
5265 6342 2.490115 CACATCTACTATCTCCTCGCCC 59.510 54.545 0.00 0.00 0.00 6.13
5266 6343 2.094957 GCACATCTACTATCTCCTCGCC 60.095 54.545 0.00 0.00 0.00 5.54
5267 6344 2.817258 AGCACATCTACTATCTCCTCGC 59.183 50.000 0.00 0.00 0.00 5.03
5268 6345 4.277174 ACAAGCACATCTACTATCTCCTCG 59.723 45.833 0.00 0.00 0.00 4.63
5269 6346 5.300539 TCACAAGCACATCTACTATCTCCTC 59.699 44.000 0.00 0.00 0.00 3.71
5270 6347 5.204292 TCACAAGCACATCTACTATCTCCT 58.796 41.667 0.00 0.00 0.00 3.69
5271 6348 5.508825 CCTCACAAGCACATCTACTATCTCC 60.509 48.000 0.00 0.00 0.00 3.71
5272 6349 5.527951 CCTCACAAGCACATCTACTATCTC 58.472 45.833 0.00 0.00 0.00 2.75
5273 6350 4.202202 GCCTCACAAGCACATCTACTATCT 60.202 45.833 0.00 0.00 0.00 1.98
5274 6351 4.054671 GCCTCACAAGCACATCTACTATC 58.945 47.826 0.00 0.00 0.00 2.08
5275 6352 3.181461 GGCCTCACAAGCACATCTACTAT 60.181 47.826 0.00 0.00 0.00 2.12
5276 6353 2.168521 GGCCTCACAAGCACATCTACTA 59.831 50.000 0.00 0.00 0.00 1.82
5277 6354 1.065854 GGCCTCACAAGCACATCTACT 60.066 52.381 0.00 0.00 0.00 2.57
5278 6355 1.373570 GGCCTCACAAGCACATCTAC 58.626 55.000 0.00 0.00 0.00 2.59
5279 6356 0.108186 CGGCCTCACAAGCACATCTA 60.108 55.000 0.00 0.00 0.00 1.98
5280 6357 1.376424 CGGCCTCACAAGCACATCT 60.376 57.895 0.00 0.00 0.00 2.90
5281 6358 2.401766 CCGGCCTCACAAGCACATC 61.402 63.158 0.00 0.00 0.00 3.06
5282 6359 2.360350 CCGGCCTCACAAGCACAT 60.360 61.111 0.00 0.00 0.00 3.21
5314 6391 2.892640 CGCTGGCTAGTGGCTACA 59.107 61.111 2.02 0.00 41.46 2.74
5315 6392 2.586357 GCGCTGGCTAGTGGCTAC 60.586 66.667 12.91 0.00 41.46 3.58
5320 6397 3.932580 TTCACGGCGCTGGCTAGTG 62.933 63.158 22.44 9.41 43.69 2.74
5321 6398 3.691342 TTCACGGCGCTGGCTAGT 61.691 61.111 22.44 0.00 39.81 2.57
5322 6399 3.188786 GTTCACGGCGCTGGCTAG 61.189 66.667 22.44 7.53 39.81 3.42
5323 6400 3.932580 CTGTTCACGGCGCTGGCTA 62.933 63.158 22.44 1.81 39.81 3.93
5326 6403 3.414700 GTCTGTTCACGGCGCTGG 61.415 66.667 22.44 9.81 0.00 4.85
5327 6404 3.414700 GGTCTGTTCACGGCGCTG 61.415 66.667 16.39 16.39 0.00 5.18
5355 6432 1.204312 GCCAAGTTCAACGAGCGAC 59.796 57.895 0.00 0.00 0.00 5.19
5356 6433 1.221466 CTGCCAAGTTCAACGAGCGA 61.221 55.000 0.00 0.00 0.00 4.93
5357 6434 1.205064 CTGCCAAGTTCAACGAGCG 59.795 57.895 0.00 0.00 0.00 5.03
5381 6470 2.142220 TGGTCCACCTTCCAGACAC 58.858 57.895 0.00 0.00 36.82 3.67
5388 6477 4.048470 GCCCCCTGGTCCACCTTC 62.048 72.222 0.00 0.00 36.82 3.46
5409 6501 2.926779 AGAGGGCAGCTGCTCACA 60.927 61.111 38.55 0.00 46.01 3.58
5420 6512 3.745803 GCAACAGCAGCAGAGGGC 61.746 66.667 0.00 0.00 45.30 5.19
5533 6626 0.904865 TCTGTTCGTCCATGGCTCCT 60.905 55.000 6.96 0.00 0.00 3.69
5586 6679 0.459489 GTTTTTGTGTGGAGCAGGCA 59.541 50.000 0.00 0.00 0.00 4.75
5587 6680 0.746659 AGTTTTTGTGTGGAGCAGGC 59.253 50.000 0.00 0.00 0.00 4.85
5588 6681 2.948979 TGTAGTTTTTGTGTGGAGCAGG 59.051 45.455 0.00 0.00 0.00 4.85
5589 6682 3.876914 TCTGTAGTTTTTGTGTGGAGCAG 59.123 43.478 0.00 0.00 0.00 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.