Multiple sequence alignment - TraesCS2D01G516700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G516700 chr2D 100.000 3377 0 0 1 3377 607962901 607959525 0.000000e+00 6237
1 TraesCS2D01G516700 chr2D 85.502 1683 192 29 970 2627 607940274 607938619 0.000000e+00 1709
2 TraesCS2D01G516700 chr2D 84.111 1693 228 22 970 2627 607971797 607970111 0.000000e+00 1598
3 TraesCS2D01G516700 chr2D 95.541 942 38 3 1 941 37134834 37135772 0.000000e+00 1504
4 TraesCS2D01G516700 chr2D 95.144 762 33 3 2619 3377 451928850 451929610 0.000000e+00 1199
5 TraesCS2D01G516700 chr2D 80.875 1417 258 9 970 2378 608185348 608183937 0.000000e+00 1103
6 TraesCS2D01G516700 chr2A 88.935 1672 141 27 970 2627 739436717 739435076 0.000000e+00 2023
7 TraesCS2D01G516700 chr2A 86.024 1431 170 19 967 2381 739687766 739686350 0.000000e+00 1507
8 TraesCS2D01G516700 chr2A 82.113 1666 251 31 983 2627 739451329 739449690 0.000000e+00 1382
9 TraesCS2D01G516700 chr2B 92.406 1251 84 9 970 2210 741152968 741151719 0.000000e+00 1773
10 TraesCS2D01G516700 chr2B 87.919 1432 159 8 970 2388 741020994 741019564 0.000000e+00 1674
11 TraesCS2D01G516700 chr2B 96.285 942 34 1 1 942 81321795 81320855 0.000000e+00 1544
12 TraesCS2D01G516700 chr2B 83.720 1683 216 39 983 2633 741116742 741115086 0.000000e+00 1537
13 TraesCS2D01G516700 chr2B 89.184 564 61 0 1138 1701 741146753 741146190 0.000000e+00 704
14 TraesCS2D01G516700 chr2B 94.293 403 16 3 2196 2595 741150482 741150084 8.010000e-171 610
15 TraesCS2D01G516700 chr2B 81.293 588 103 7 1793 2378 741389127 741388545 1.420000e-128 470
16 TraesCS2D01G516700 chr2B 91.892 185 14 1 970 1154 741147101 741146918 1.200000e-64 257
17 TraesCS2D01G516700 chr7D 98.409 943 15 0 1 943 478336672 478337614 0.000000e+00 1659
18 TraesCS2D01G516700 chr7D 97.134 942 27 0 1 942 36664680 36665621 0.000000e+00 1591
19 TraesCS2D01G516700 chr7D 95.238 756 32 3 2626 3377 614245137 614244382 0.000000e+00 1194
20 TraesCS2D01G516700 chr3D 97.771 942 18 1 1 942 19544746 19545684 0.000000e+00 1620
21 TraesCS2D01G516700 chr3D 95.276 762 32 3 2619 3377 384644502 384643742 0.000000e+00 1205
22 TraesCS2D01G516700 chr4B 96.072 942 36 1 1 942 122313295 122314235 0.000000e+00 1533
23 TraesCS2D01G516700 chr3A 96.064 940 35 2 4 942 728986666 728985728 0.000000e+00 1530
24 TraesCS2D01G516700 chr3B 96.296 918 32 2 25 942 477627485 477628400 0.000000e+00 1506
25 TraesCS2D01G516700 chr6D 94.157 907 46 5 39 944 306212025 306211125 0.000000e+00 1375
26 TraesCS2D01G516700 chr6D 95.889 754 30 1 2624 3377 210730074 210729322 0.000000e+00 1219
27 TraesCS2D01G516700 chr1D 95.520 759 30 4 2619 3374 464267604 464268361 0.000000e+00 1210
28 TraesCS2D01G516700 chr5D 95.629 755 28 4 2626 3377 14736874 14737626 0.000000e+00 1206
29 TraesCS2D01G516700 chr5D 94.980 757 33 4 2624 3377 447681707 447680953 0.000000e+00 1182
30 TraesCS2D01G516700 chr4D 95.623 754 29 3 2625 3377 8140748 8141498 0.000000e+00 1206
31 TraesCS2D01G516700 chr7B 95.364 755 31 2 2626 3377 708412045 708412798 0.000000e+00 1197


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G516700 chr2D 607959525 607962901 3376 True 6237 6237 100.00000 1 3377 1 chr2D.!!$R2 3376
1 TraesCS2D01G516700 chr2D 607938619 607940274 1655 True 1709 1709 85.50200 970 2627 1 chr2D.!!$R1 1657
2 TraesCS2D01G516700 chr2D 607970111 607971797 1686 True 1598 1598 84.11100 970 2627 1 chr2D.!!$R3 1657
3 TraesCS2D01G516700 chr2D 37134834 37135772 938 False 1504 1504 95.54100 1 941 1 chr2D.!!$F1 940
4 TraesCS2D01G516700 chr2D 451928850 451929610 760 False 1199 1199 95.14400 2619 3377 1 chr2D.!!$F2 758
5 TraesCS2D01G516700 chr2D 608183937 608185348 1411 True 1103 1103 80.87500 970 2378 1 chr2D.!!$R4 1408
6 TraesCS2D01G516700 chr2A 739435076 739436717 1641 True 2023 2023 88.93500 970 2627 1 chr2A.!!$R1 1657
7 TraesCS2D01G516700 chr2A 739686350 739687766 1416 True 1507 1507 86.02400 967 2381 1 chr2A.!!$R3 1414
8 TraesCS2D01G516700 chr2A 739449690 739451329 1639 True 1382 1382 82.11300 983 2627 1 chr2A.!!$R2 1644
9 TraesCS2D01G516700 chr2B 741019564 741020994 1430 True 1674 1674 87.91900 970 2388 1 chr2B.!!$R2 1418
10 TraesCS2D01G516700 chr2B 81320855 81321795 940 True 1544 1544 96.28500 1 942 1 chr2B.!!$R1 941
11 TraesCS2D01G516700 chr2B 741115086 741116742 1656 True 1537 1537 83.72000 983 2633 1 chr2B.!!$R3 1650
12 TraesCS2D01G516700 chr2B 741146190 741152968 6778 True 836 1773 91.94375 970 2595 4 chr2B.!!$R5 1625
13 TraesCS2D01G516700 chr2B 741388545 741389127 582 True 470 470 81.29300 1793 2378 1 chr2B.!!$R4 585
14 TraesCS2D01G516700 chr7D 478336672 478337614 942 False 1659 1659 98.40900 1 943 1 chr7D.!!$F2 942
15 TraesCS2D01G516700 chr7D 36664680 36665621 941 False 1591 1591 97.13400 1 942 1 chr7D.!!$F1 941
16 TraesCS2D01G516700 chr7D 614244382 614245137 755 True 1194 1194 95.23800 2626 3377 1 chr7D.!!$R1 751
17 TraesCS2D01G516700 chr3D 19544746 19545684 938 False 1620 1620 97.77100 1 942 1 chr3D.!!$F1 941
18 TraesCS2D01G516700 chr3D 384643742 384644502 760 True 1205 1205 95.27600 2619 3377 1 chr3D.!!$R1 758
19 TraesCS2D01G516700 chr4B 122313295 122314235 940 False 1533 1533 96.07200 1 942 1 chr4B.!!$F1 941
20 TraesCS2D01G516700 chr3A 728985728 728986666 938 True 1530 1530 96.06400 4 942 1 chr3A.!!$R1 938
21 TraesCS2D01G516700 chr3B 477627485 477628400 915 False 1506 1506 96.29600 25 942 1 chr3B.!!$F1 917
22 TraesCS2D01G516700 chr6D 306211125 306212025 900 True 1375 1375 94.15700 39 944 1 chr6D.!!$R2 905
23 TraesCS2D01G516700 chr6D 210729322 210730074 752 True 1219 1219 95.88900 2624 3377 1 chr6D.!!$R1 753
24 TraesCS2D01G516700 chr1D 464267604 464268361 757 False 1210 1210 95.52000 2619 3374 1 chr1D.!!$F1 755
25 TraesCS2D01G516700 chr5D 14736874 14737626 752 False 1206 1206 95.62900 2626 3377 1 chr5D.!!$F1 751
26 TraesCS2D01G516700 chr5D 447680953 447681707 754 True 1182 1182 94.98000 2624 3377 1 chr5D.!!$R1 753
27 TraesCS2D01G516700 chr4D 8140748 8141498 750 False 1206 1206 95.62300 2625 3377 1 chr4D.!!$F1 752
28 TraesCS2D01G516700 chr7B 708412045 708412798 753 False 1197 1197 95.36400 2626 3377 1 chr7B.!!$F1 751

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
32 33 0.108019 GTTGTTCCCTCAGGTTCGGT 59.892 55.0 0.0 0.0 0.0 4.69 F
1285 1292 0.384669 GTCTGGGGAACTCGATACGG 59.615 60.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1833 1861 0.167908 AATCGCGACCGTACGTGTAA 59.832 50.0 12.93 0.0 43.01 2.41 R
3133 7560 0.110486 ATTCTTTGGTGGAGCGGTGT 59.890 50.0 0.00 0.0 0.00 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 0.108019 GTTGTTCCCTCAGGTTCGGT 59.892 55.000 0.00 0.00 0.00 4.69
72 73 2.127232 GCTGTGTGGTTGTGGGCTT 61.127 57.895 0.00 0.00 0.00 4.35
121 123 0.897621 ATGATCTGCGTCCACTGACA 59.102 50.000 0.00 0.00 41.85 3.58
143 145 1.823169 GACGGTGGAGGTAGTGGCAA 61.823 60.000 0.00 0.00 0.00 4.52
385 389 2.482142 GCAACTACTGGGATCGAGGAAG 60.482 54.545 0.00 0.00 0.00 3.46
744 748 5.150683 CCGTTTATCGTTGCTTTCAATTCA 58.849 37.500 0.00 0.00 37.94 2.57
958 962 3.391506 AAAAGCTCAATGTTTCCAGGC 57.608 42.857 0.00 0.00 0.00 4.85
959 963 2.299326 AAGCTCAATGTTTCCAGGCT 57.701 45.000 0.00 0.00 0.00 4.58
960 964 2.299326 AGCTCAATGTTTCCAGGCTT 57.701 45.000 0.00 0.00 0.00 4.35
961 965 1.891150 AGCTCAATGTTTCCAGGCTTG 59.109 47.619 0.00 0.00 0.00 4.01
962 966 1.067354 GCTCAATGTTTCCAGGCTTGG 60.067 52.381 8.96 8.96 46.49 3.61
963 967 2.242043 CTCAATGTTTCCAGGCTTGGT 58.758 47.619 15.41 0.00 45.26 3.67
964 968 2.629617 CTCAATGTTTCCAGGCTTGGTT 59.370 45.455 15.41 0.00 45.26 3.67
965 969 2.364970 TCAATGTTTCCAGGCTTGGTTG 59.635 45.455 15.41 11.38 45.26 3.77
981 985 5.623673 GCTTGGTTGTATTAACGACTTGTTG 59.376 40.000 0.00 0.00 42.01 3.33
1085 1089 7.381408 GGTTCCAGCTTGTGTTTTTACTAATTC 59.619 37.037 0.00 0.00 0.00 2.17
1161 1165 7.773489 TTTTTGTGGGATGAATAATCTGTCA 57.227 32.000 0.00 0.00 35.43 3.58
1237 1244 4.579869 TGATCTGGCAGGAAAGTTTCTAC 58.420 43.478 15.73 5.27 0.00 2.59
1285 1292 0.384669 GTCTGGGGAACTCGATACGG 59.615 60.000 0.00 0.00 0.00 4.02
1294 1301 1.663695 ACTCGATACGGCATTTTGGG 58.336 50.000 0.00 0.00 0.00 4.12
1344 1351 2.568062 TGCTGGAAACCGTATAACTGGA 59.432 45.455 0.00 0.00 0.00 3.86
1416 1423 1.225376 CGCGCAACAACCTTACAGGA 61.225 55.000 8.75 0.00 37.67 3.86
1442 1449 4.759693 TGTACCAAACAGTTGCTTCATAGG 59.240 41.667 0.00 0.00 33.01 2.57
1458 1465 7.342799 TGCTTCATAGGGCTGAATTTTCTTAAT 59.657 33.333 0.00 0.00 34.76 1.40
1533 1540 6.688637 TCAAGTCTGATTGCTTTGGATATG 57.311 37.500 0.00 0.00 0.00 1.78
1742 1749 7.698163 ATATCTCTTTCAAAGGTGATAGGGT 57.302 36.000 14.60 2.31 35.45 4.34
1766 1773 6.684555 GTCGATGCAATTTTTCAGTCAGTATC 59.315 38.462 0.00 0.00 0.00 2.24
1785 1804 9.298250 TCAGTATCTGAGAGTAAACTGTACTTT 57.702 33.333 13.27 0.00 35.39 2.66
1786 1805 9.347934 CAGTATCTGAGAGTAAACTGTACTTTG 57.652 37.037 8.16 0.00 32.44 2.77
1803 1831 7.913789 TGTACTTTGGTGGATATGACTTAAGT 58.086 34.615 8.13 8.13 0.00 2.24
1917 1945 2.659428 CATGGAGAAATTCCCTGGGAC 58.341 52.381 16.85 3.63 46.19 4.46
2037 2065 1.741028 TGGACCTCTCCCACAATGAA 58.259 50.000 0.00 0.00 35.34 2.57
2145 2174 2.386661 CAAACTATGGACAGCTCGGT 57.613 50.000 0.00 0.00 0.00 4.69
2290 3570 8.129496 TGACCTAGTTCTATATGTTGTCACAA 57.871 34.615 0.00 0.00 36.16 3.33
2298 3578 0.465460 ATGTTGTCACAACTGCCGGT 60.465 50.000 21.23 0.00 36.16 5.28
2466 3780 6.951971 ACTTATGTAAGATCCACAGAGCTTT 58.048 36.000 6.78 0.00 46.43 3.51
2483 3798 6.432472 CAGAGCTTTCTTAATTCCTTTCTGGT 59.568 38.462 0.00 0.00 37.07 4.00
2558 3875 9.534565 GAGAATGTATCAGAAGCTTTACATACA 57.465 33.333 17.64 18.64 34.94 2.29
2563 3880 2.351726 CAGAAGCTTTACATACACGGCC 59.648 50.000 0.00 0.00 0.00 6.13
2654 4447 3.612115 AATGGAGGACGACCCCCGA 62.612 63.158 0.00 0.00 41.76 5.14
2787 4601 5.451937 CGCTACTCCTATCCAAGTGATGAAA 60.452 44.000 0.00 0.00 34.76 2.69
3016 4833 2.697761 GGTCTAGCTGCCGTCGACA 61.698 63.158 17.16 0.00 0.00 4.35
3063 4880 0.323816 TCCTGCACGAGTCCATCTCT 60.324 55.000 0.00 0.00 40.75 3.10
3131 7558 2.558378 CGCCATCAATGAGTGAGATGT 58.442 47.619 0.00 0.00 40.43 3.06
3133 7560 3.538591 GCCATCAATGAGTGAGATGTCA 58.461 45.455 0.00 0.00 40.43 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 0.608130 CCTGTGGACCAGATTCACGA 59.392 55.000 0.00 0.00 44.49 4.35
72 73 4.838423 TGAAGATCTTCAGGTAACCAGTCA 59.162 41.667 30.05 7.37 43.90 3.41
119 121 0.178941 ACTACCTCCACCGTCCTTGT 60.179 55.000 0.00 0.00 0.00 3.16
121 123 0.903454 CCACTACCTCCACCGTCCTT 60.903 60.000 0.00 0.00 0.00 3.36
143 145 4.057428 GACGGCAGCTCCACGAGT 62.057 66.667 8.06 0.00 34.01 4.18
329 333 1.204786 TTGTGACGGGGGATGTCCAT 61.205 55.000 0.86 0.00 37.91 3.41
385 389 0.038159 CTTGTGTCGTCTCCTCCACC 60.038 60.000 0.00 0.00 0.00 4.61
744 748 3.154710 GGTGGAGAAAAGAAAACCCGAT 58.845 45.455 0.00 0.00 0.00 4.18
944 948 2.364970 CAACCAAGCCTGGAAACATTGA 59.635 45.455 8.77 0.00 46.92 2.57
945 949 2.102925 ACAACCAAGCCTGGAAACATTG 59.897 45.455 8.77 4.23 46.92 2.82
946 950 2.397597 ACAACCAAGCCTGGAAACATT 58.602 42.857 8.77 0.00 46.92 2.71
947 951 2.086610 ACAACCAAGCCTGGAAACAT 57.913 45.000 8.77 0.00 46.92 2.71
948 952 2.738587 TACAACCAAGCCTGGAAACA 57.261 45.000 8.77 0.00 46.92 2.83
949 953 5.466819 GTTAATACAACCAAGCCTGGAAAC 58.533 41.667 8.77 0.00 46.92 2.78
950 954 4.216687 CGTTAATACAACCAAGCCTGGAAA 59.783 41.667 8.77 0.00 46.92 3.13
951 955 3.754323 CGTTAATACAACCAAGCCTGGAA 59.246 43.478 8.77 0.00 46.92 3.53
952 956 3.008157 TCGTTAATACAACCAAGCCTGGA 59.992 43.478 8.77 0.00 46.92 3.86
954 958 4.000988 AGTCGTTAATACAACCAAGCCTG 58.999 43.478 0.00 0.00 0.00 4.85
955 959 4.281898 AGTCGTTAATACAACCAAGCCT 57.718 40.909 0.00 0.00 0.00 4.58
956 960 4.214758 ACAAGTCGTTAATACAACCAAGCC 59.785 41.667 0.00 0.00 0.00 4.35
957 961 5.352643 ACAAGTCGTTAATACAACCAAGC 57.647 39.130 0.00 0.00 0.00 4.01
958 962 6.140110 CCAACAAGTCGTTAATACAACCAAG 58.860 40.000 0.00 0.00 35.52 3.61
959 963 5.008811 CCCAACAAGTCGTTAATACAACCAA 59.991 40.000 0.00 0.00 35.52 3.67
960 964 4.515944 CCCAACAAGTCGTTAATACAACCA 59.484 41.667 0.00 0.00 35.52 3.67
961 965 4.083164 CCCCAACAAGTCGTTAATACAACC 60.083 45.833 0.00 0.00 35.52 3.77
962 966 4.614306 GCCCCAACAAGTCGTTAATACAAC 60.614 45.833 0.00 0.00 35.52 3.32
963 967 3.502979 GCCCCAACAAGTCGTTAATACAA 59.497 43.478 0.00 0.00 35.52 2.41
964 968 3.075884 GCCCCAACAAGTCGTTAATACA 58.924 45.455 0.00 0.00 35.52 2.29
965 969 3.075884 TGCCCCAACAAGTCGTTAATAC 58.924 45.455 0.00 0.00 35.52 1.89
981 985 0.606944 TTGACGTTGGTATGTGCCCC 60.607 55.000 0.00 0.00 0.00 5.80
1085 1089 1.694150 TCAAGATGAATAGCCCGGGAG 59.306 52.381 29.31 0.00 0.00 4.30
1237 1244 4.443913 TGTCATGCAAATCAATGACCTG 57.556 40.909 12.13 0.00 41.81 4.00
1285 1292 2.037144 AGATGGCAGATCCCAAAATGC 58.963 47.619 0.00 0.00 38.61 3.56
1344 1351 6.543100 AGCCACAAATGTGTTGATCAATTTTT 59.457 30.769 12.12 6.71 44.21 1.94
1442 1449 7.339466 TCCCAGTAAGATTAAGAAAATTCAGCC 59.661 37.037 0.00 0.00 0.00 4.85
1458 1465 4.962995 CCAGATAAGGAGTTCCCAGTAAGA 59.037 45.833 0.00 0.00 37.41 2.10
1533 1540 2.421424 GCCCATGAACTGATTGTGTCTC 59.579 50.000 0.00 0.00 0.00 3.36
1742 1749 6.595326 AGATACTGACTGAAAAATTGCATCGA 59.405 34.615 0.00 0.00 0.00 3.59
1766 1773 5.696724 CCACCAAAGTACAGTTTACTCTCAG 59.303 44.000 0.00 0.00 0.00 3.35
1785 1804 3.780294 AGCCACTTAAGTCATATCCACCA 59.220 43.478 4.77 0.00 0.00 4.17
1786 1805 4.423625 AGCCACTTAAGTCATATCCACC 57.576 45.455 4.77 0.00 0.00 4.61
1803 1831 0.476338 TGGTAGCAAAGGTGAAGCCA 59.524 50.000 0.00 0.00 40.61 4.75
1833 1861 0.167908 AATCGCGACCGTACGTGTAA 59.832 50.000 12.93 0.00 43.01 2.41
1917 1945 2.104963 GACATGGCTTAGGTTCCCTAGG 59.895 54.545 0.06 0.06 37.42 3.02
2037 2065 3.197983 GCCAAGGTATTAGTCCACTCAGT 59.802 47.826 0.00 0.00 0.00 3.41
2048 2076 9.030452 ACAATTGATTTAACTGCCAAGGTATTA 57.970 29.630 13.59 0.00 0.00 0.98
2145 2174 2.502142 AGCTGTCCATGCTGAATGAA 57.498 45.000 0.00 0.00 39.56 2.57
2290 3570 0.454196 GTCAACACAAAACCGGCAGT 59.546 50.000 0.00 0.00 0.00 4.40
2298 3578 3.274288 GGCCCAAAATGTCAACACAAAA 58.726 40.909 0.00 0.00 35.64 2.44
2466 3780 5.237236 ACGGAACCAGAAAGGAATTAAGA 57.763 39.130 0.00 0.00 41.22 2.10
2483 3798 6.014327 ACAAAGGAGTAGGTTACATTACGGAA 60.014 38.462 0.00 0.00 0.00 4.30
2558 3875 2.429610 AGTACGATCTGTTATTGGCCGT 59.570 45.455 0.00 0.00 0.00 5.68
2563 3880 8.430828 CAGCATCAATAGTACGATCTGTTATTG 58.569 37.037 0.00 11.66 34.61 1.90
2654 4447 2.907703 ATCGTCCAGATGCAGAGGT 58.092 52.632 0.00 0.00 38.36 3.85
2787 4601 1.055040 GCCCAGACTATCAGCATCCT 58.945 55.000 0.00 0.00 0.00 3.24
2870 4687 2.039787 TGACCCATACCCGGCAGA 59.960 61.111 0.00 0.00 0.00 4.26
2898 4715 3.535629 CTGGTTGAGGAGTGCGCCA 62.536 63.158 4.18 0.00 0.00 5.69
3016 4833 4.295119 GTCTGGCGTCGTGGTGGT 62.295 66.667 0.00 0.00 0.00 4.16
3131 7558 1.227823 CTTTGGTGGAGCGGTGTGA 60.228 57.895 0.00 0.00 0.00 3.58
3133 7560 0.110486 ATTCTTTGGTGGAGCGGTGT 59.890 50.000 0.00 0.00 0.00 4.16
3270 7700 1.004560 ACTTGCTTGCGCTGCTCTA 60.005 52.632 22.08 10.16 36.97 2.43
3289 7719 1.744741 GCCTCTGCAGCTTCTGTCC 60.745 63.158 9.47 0.00 37.47 4.02
3359 7791 4.331622 ACCGTGCTATGACTCGGA 57.668 55.556 14.72 0.00 46.85 4.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.