Multiple sequence alignment - TraesCS2D01G516500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G516500 chr2D 100.000 6777 0 0 1 6777 607932282 607939058 0.000000e+00 12515
1 TraesCS2D01G516500 chr2D 94.606 2966 99 27 2224 5155 607955126 607958064 0.000000e+00 4534
2 TraesCS2D01G516500 chr2D 93.284 953 44 9 5398 6343 607958064 607959003 0.000000e+00 1387
3 TraesCS2D01G516500 chr2D 96.761 247 5 2 5155 5401 541547289 541547532 6.330000e-110 409
4 TraesCS2D01G516500 chr2D 95.984 249 6 2 5155 5402 6521411 6521166 1.060000e-107 401
5 TraesCS2D01G516500 chr2D 83.989 356 38 11 6175 6526 607969956 607970296 2.360000e-84 324
6 TraesCS2D01G516500 chr2D 90.323 248 9 4 5840 6084 607969702 607969937 1.840000e-80 311
7 TraesCS2D01G516500 chr2D 91.473 129 10 1 6263 6391 607937960 607938087 6.990000e-40 176
8 TraesCS2D01G516500 chr2D 91.473 129 10 1 5679 5806 607938544 607938672 6.990000e-40 176
9 TraesCS2D01G516500 chr2D 87.179 156 16 4 6263 6416 607958345 607958498 2.510000e-39 174
10 TraesCS2D01G516500 chr2D 97.826 92 2 0 2131 2222 607952568 607952659 7.030000e-35 159
11 TraesCS2D01G516500 chr2A 92.639 5217 241 49 1 5155 739429011 739434146 0.000000e+00 7374
12 TraesCS2D01G516500 chr2A 97.035 1383 26 5 5398 6777 739434146 739435516 0.000000e+00 2313
13 TraesCS2D01G516500 chr2A 93.386 1255 58 9 1973 3212 739446063 739447307 0.000000e+00 1834
14 TraesCS2D01G516500 chr2A 89.613 1473 89 21 3700 5155 739447906 739449331 0.000000e+00 1814
15 TraesCS2D01G516500 chr2A 93.000 500 26 4 3202 3694 739447487 739447984 0.000000e+00 721
16 TraesCS2D01G516500 chr2A 88.158 532 40 15 6263 6771 739449615 739450146 4.490000e-171 612
17 TraesCS2D01G516500 chr2A 91.768 413 30 4 5398 5806 739449331 739449743 7.620000e-159 571
18 TraesCS2D01G516500 chr2A 85.744 477 37 11 1448 1920 739445595 739446044 6.150000e-130 475
19 TraesCS2D01G516500 chr2A 84.737 380 33 15 1060 1421 739445236 739445608 2.320000e-94 357
20 TraesCS2D01G516500 chr2A 91.473 129 10 1 5679 5806 739435001 739435129 6.990000e-40 176
21 TraesCS2D01G516500 chr2A 90.698 129 11 1 6263 6391 739434427 739434554 3.250000e-38 171
22 TraesCS2D01G516500 chr2B 92.047 3546 217 33 1 3521 741013303 741016808 0.000000e+00 4926
23 TraesCS2D01G516500 chr2B 92.899 1873 83 19 1795 3660 741123413 741125242 0.000000e+00 2676
24 TraesCS2D01G516500 chr2B 95.176 1223 41 8 3944 5155 741016804 741018019 0.000000e+00 1916
25 TraesCS2D01G516500 chr2B 89.590 1220 74 24 5596 6777 741114356 741115560 0.000000e+00 1500
26 TraesCS2D01G516500 chr2B 88.230 1062 83 19 5398 6445 741018019 741019052 0.000000e+00 1230
27 TraesCS2D01G516500 chr2B 94.023 435 14 3 4096 4521 741085317 741085748 0.000000e+00 649
28 TraesCS2D01G516500 chr2B 82.468 713 74 30 5633 6321 741136491 741137176 1.640000e-160 577
29 TraesCS2D01G516500 chr2B 95.436 241 11 0 4528 4768 741085992 741086232 1.070000e-102 385
30 TraesCS2D01G516500 chr2B 96.413 223 8 0 6555 6777 741019562 741019784 1.070000e-97 368
31 TraesCS2D01G516500 chr2B 93.607 219 14 0 6559 6777 741137349 741137567 1.820000e-85 327
32 TraesCS2D01G516500 chr2B 95.408 196 9 0 3685 3880 741125385 741125580 5.100000e-81 313
33 TraesCS2D01G516500 chr2B 92.614 176 6 3 4977 5152 741112794 741112962 5.250000e-61 246
34 TraesCS2D01G516500 chr2B 86.667 150 17 3 6268 6416 741136541 741136688 5.440000e-36 163
35 TraesCS2D01G516500 chr2B 85.430 151 20 2 3859 4007 741125408 741125558 9.100000e-34 156
36 TraesCS2D01G516500 chr5A 84.529 446 42 12 4599 5036 26152142 26152568 3.780000e-112 416
37 TraesCS2D01G516500 chr5A 86.420 243 21 6 4363 4602 26146530 26146763 8.720000e-64 255
38 TraesCS2D01G516500 chr5A 79.927 274 44 10 327 598 4040476 4040740 2.490000e-44 191
39 TraesCS2D01G516500 chr4D 94.981 259 8 4 5143 5400 115044267 115044521 1.060000e-107 401
40 TraesCS2D01G516500 chr4D 95.951 247 7 1 5154 5400 24775852 24775609 1.370000e-106 398
41 TraesCS2D01G516500 chr4D 82.051 273 39 7 322 591 320189472 320189207 2.460000e-54 224
42 TraesCS2D01G516500 chr6B 95.968 248 7 1 5154 5401 347227396 347227152 3.810000e-107 399
43 TraesCS2D01G516500 chr5B 95.968 248 7 1 5152 5399 656245382 656245626 3.810000e-107 399
44 TraesCS2D01G516500 chr4A 95.951 247 7 1 5155 5401 615435032 615435275 1.370000e-106 398
45 TraesCS2D01G516500 chr3D 92.806 278 14 5 5123 5399 532557841 532558113 1.370000e-106 398
46 TraesCS2D01G516500 chr1B 95.600 250 8 1 5156 5405 453879193 453879439 1.370000e-106 398
47 TraesCS2D01G516500 chr1B 78.817 524 76 15 4352 4872 487776386 487776877 3.050000e-83 320
48 TraesCS2D01G516500 chr5D 82.635 334 48 9 5465 5797 37189766 37190090 3.090000e-73 287
49 TraesCS2D01G516500 chr6D 81.979 283 41 7 319 598 324757604 324757879 1.470000e-56 231
50 TraesCS2D01G516500 chr7A 82.117 274 38 8 327 598 575605539 575605275 2.460000e-54 224
51 TraesCS2D01G516500 chrUn 81.752 274 39 10 327 598 324914379 324914115 1.140000e-52 219


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G516500 chr2D 607932282 607939058 6776 False 4289.000000 12515 94.315333 1 6777 3 chr2D.!!$F2 6776
1 TraesCS2D01G516500 chr2D 607952568 607959003 6435 False 1563.500000 4534 93.223750 2131 6416 4 chr2D.!!$F3 4285
2 TraesCS2D01G516500 chr2D 607969702 607970296 594 False 317.500000 324 87.156000 5840 6526 2 chr2D.!!$F4 686
3 TraesCS2D01G516500 chr2A 739429011 739435516 6505 False 2508.500000 7374 92.961250 1 6777 4 chr2A.!!$F1 6776
4 TraesCS2D01G516500 chr2A 739445236 739450146 4910 False 912.000000 1834 89.486571 1060 6771 7 chr2A.!!$F2 5711
5 TraesCS2D01G516500 chr2B 741013303 741019784 6481 False 2110.000000 4926 92.966500 1 6777 4 chr2B.!!$F1 6776
6 TraesCS2D01G516500 chr2B 741123413 741125580 2167 False 1048.333333 2676 91.245667 1795 4007 3 chr2B.!!$F4 2212
7 TraesCS2D01G516500 chr2B 741112794 741115560 2766 False 873.000000 1500 91.102000 4977 6777 2 chr2B.!!$F3 1800
8 TraesCS2D01G516500 chr2B 741085317 741086232 915 False 517.000000 649 94.729500 4096 4768 2 chr2B.!!$F2 672
9 TraesCS2D01G516500 chr2B 741136491 741137567 1076 False 355.666667 577 87.580667 5633 6777 3 chr2B.!!$F5 1144

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
603 623 0.539051 CTGGGTGCTCTCCTAACCAG 59.461 60.000 0.00 0.00 39.45 4.00 F
618 638 0.965866 ACCAGATTGAGACCGAGCGA 60.966 55.000 0.00 0.00 0.00 4.93 F
1257 1301 1.476007 GCGGCATCCTCCACCTCTAT 61.476 60.000 0.00 0.00 0.00 1.98 F
2892 5447 1.349234 TGTCGAATGTGCAGTCATCG 58.651 50.000 0.00 0.00 0.00 3.84 F
2932 5489 2.296190 GGGCTTTGTTTGTACTCTTGGG 59.704 50.000 0.00 0.00 0.00 4.12 F
3988 6890 1.707632 CCATAGTCGCTCTGCTATGC 58.292 55.000 0.00 0.00 41.72 3.14 F
5179 8337 1.876156 TCAATGTGTACGTGCAATGCA 59.124 42.857 8.25 2.72 35.60 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1604 1666 1.930503 CGGCGCATACAAAGTGTCATA 59.069 47.619 10.83 0.00 0.00 2.15 R
1740 1802 4.130118 GTTGACAATCTCACAACCTCTGT 58.870 43.478 0.00 0.00 38.20 3.41 R
2932 5489 0.173708 CCTCAGTAGGTTCCGAGTGC 59.826 60.000 2.61 0.00 38.19 4.40 R
3968 6867 1.707632 CATAGCAGAGCGACTATGGC 58.292 55.000 9.23 0.00 41.27 4.40 R
4868 8026 1.967066 AGGAGAAGGCATAGGACATCG 59.033 52.381 0.00 0.00 0.00 3.84 R
5286 8444 0.091344 CGAGCGCTCAACACGTTTAG 59.909 55.000 34.69 12.34 0.00 1.85 R
6260 10674 1.065102 CTCCTTTGCAATCATCAGCCG 59.935 52.381 0.00 0.00 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.374885 CCGTACATGCCCGTGAACA 60.375 57.895 0.00 0.00 0.00 3.18
70 71 7.390440 CCACCAAGACATCAATAAACTTGTCTA 59.610 37.037 4.98 0.00 45.98 2.59
142 143 2.168521 CCACCACTTCGTCCATCACTAT 59.831 50.000 0.00 0.00 0.00 2.12
143 144 3.190079 CACCACTTCGTCCATCACTATG 58.810 50.000 0.00 0.00 0.00 2.23
175 176 7.199167 TCTTTATGATCCATCTTCAACCTCA 57.801 36.000 0.00 0.00 0.00 3.86
199 200 5.614308 TCATCAAGCAATCTGTCGGATAAT 58.386 37.500 0.00 0.00 33.71 1.28
247 248 6.396829 AAAGAACATCAGGTTTCCTTTGAG 57.603 37.500 0.00 0.00 40.63 3.02
276 277 0.547712 TAAGAAGGGCCCTCACAGCT 60.548 55.000 28.84 14.73 0.00 4.24
297 298 2.037367 TCCTGGAGGAGACCACGG 59.963 66.667 0.00 0.00 39.78 4.94
311 312 2.554893 GACCACGGCAATTCCAACTAAA 59.445 45.455 0.00 0.00 34.01 1.85
329 330 6.560253 ACTAAAAAGTTTCATCAGCGTGAT 57.440 33.333 0.00 0.00 37.65 3.06
377 378 8.116753 CCTCGTTGAAATCATAAACTCATACAC 58.883 37.037 0.00 0.00 0.00 2.90
393 394 8.306313 ACTCATACACAACATATACTCCTTCA 57.694 34.615 0.00 0.00 0.00 3.02
402 403 7.492669 ACAACATATACTCCTTCAATCAAGACG 59.507 37.037 0.00 0.00 33.29 4.18
404 405 7.203910 ACATATACTCCTTCAATCAAGACGAC 58.796 38.462 0.00 0.00 33.29 4.34
438 439 5.341285 AGACACATCTACTATGGGAGACCTT 60.341 44.000 0.00 0.00 42.62 3.50
449 450 0.966920 GGAGACCTTTCACGGAGACA 59.033 55.000 0.00 0.00 0.00 3.41
464 465 2.904434 GGAGACAACCAAGACCTCCTAA 59.096 50.000 0.00 0.00 40.07 2.69
465 466 3.306849 GGAGACAACCAAGACCTCCTAAC 60.307 52.174 0.00 0.00 40.07 2.34
467 468 3.071167 AGACAACCAAGACCTCCTAACAC 59.929 47.826 0.00 0.00 0.00 3.32
469 470 3.139077 CAACCAAGACCTCCTAACACAC 58.861 50.000 0.00 0.00 0.00 3.82
471 472 2.104281 ACCAAGACCTCCTAACACACAC 59.896 50.000 0.00 0.00 0.00 3.82
473 474 3.244561 CCAAGACCTCCTAACACACACAT 60.245 47.826 0.00 0.00 0.00 3.21
475 476 5.512404 CCAAGACCTCCTAACACACACATAA 60.512 44.000 0.00 0.00 0.00 1.90
476 477 6.173339 CAAGACCTCCTAACACACACATAAT 58.827 40.000 0.00 0.00 0.00 1.28
500 520 3.103911 CAGCCACGACGTCGAACC 61.104 66.667 41.52 26.58 43.02 3.62
509 529 2.431771 CGTCGAACCACGCCATCA 60.432 61.111 0.00 0.00 42.26 3.07
511 531 1.715585 GTCGAACCACGCCATCATG 59.284 57.895 0.00 0.00 42.26 3.07
582 602 1.305930 GGCCAGCAAAACCCTAGTCG 61.306 60.000 0.00 0.00 0.00 4.18
603 623 0.539051 CTGGGTGCTCTCCTAACCAG 59.461 60.000 0.00 0.00 39.45 4.00
618 638 0.965866 ACCAGATTGAGACCGAGCGA 60.966 55.000 0.00 0.00 0.00 4.93
630 650 2.163211 GACCGAGCGAAGTTAGTTAGGT 59.837 50.000 4.55 4.55 31.41 3.08
632 652 3.127721 ACCGAGCGAAGTTAGTTAGGTAC 59.872 47.826 3.17 0.00 0.00 3.34
741 781 4.202545 CCCTACTACTTCTCTATCCCCGAA 60.203 50.000 0.00 0.00 0.00 4.30
747 787 4.153411 ACTTCTCTATCCCCGAACCTATG 58.847 47.826 0.00 0.00 0.00 2.23
750 790 5.329191 TCTCTATCCCCGAACCTATGTAA 57.671 43.478 0.00 0.00 0.00 2.41
872 912 1.596752 ATCACGGCGTGCAACTTGA 60.597 52.632 33.59 16.21 32.98 3.02
881 921 4.854291 CGGCGTGCAACTTGATTAATTTAA 59.146 37.500 0.00 0.00 31.75 1.52
1158 1202 4.012721 AACCCTCTCCCCTCCGCT 62.013 66.667 0.00 0.00 0.00 5.52
1172 1216 2.173669 CCGCTACATCCGCCACAAG 61.174 63.158 0.00 0.00 0.00 3.16
1257 1301 1.476007 GCGGCATCCTCCACCTCTAT 61.476 60.000 0.00 0.00 0.00 1.98
1571 1630 3.691609 GTCATCAGGTGAATTTCCAGACC 59.308 47.826 0.00 0.00 38.90 3.85
1603 1665 6.267817 AGTTGATTGCATTTGATTATGGTCG 58.732 36.000 0.00 0.00 0.00 4.79
1604 1666 5.833406 TGATTGCATTTGATTATGGTCGT 57.167 34.783 0.00 0.00 0.00 4.34
1799 1861 6.072175 TGGTTTATTGATCTTGTGTAGTTGGC 60.072 38.462 0.00 0.00 0.00 4.52
2007 2069 3.758554 CCTTTTAGGCATACACACAAGCT 59.241 43.478 0.00 0.00 0.00 3.74
2091 2154 2.031870 GCTTGAGAAAACCCCAGTTGT 58.968 47.619 0.00 0.00 35.97 3.32
2092 2155 3.219281 GCTTGAGAAAACCCCAGTTGTA 58.781 45.455 0.00 0.00 35.97 2.41
2093 2156 3.634910 GCTTGAGAAAACCCCAGTTGTAA 59.365 43.478 0.00 0.00 35.97 2.41
2252 4780 5.766174 AGGCAAATCAATTTTCATGCTGTTT 59.234 32.000 0.00 0.00 0.00 2.83
2368 4918 3.000925 GCTTATGCATGCATTTCTGTTGC 59.999 43.478 36.23 23.29 38.66 4.17
2428 4978 6.061022 TCTGGCTACAGTTTGGAAATCATA 57.939 37.500 0.00 0.00 45.14 2.15
2630 5180 3.058914 GTGACCATTCTTTCCAGTGTTCG 60.059 47.826 0.00 0.00 0.00 3.95
2682 5232 3.597255 CCGGTAAGGAAGGTTCTTCTTC 58.403 50.000 7.47 0.00 45.00 2.87
2685 5235 5.246307 CGGTAAGGAAGGTTCTTCTTCATT 58.754 41.667 9.00 9.00 45.67 2.57
2762 5312 7.093988 TGGAAGTCATCTTTTCTTGTTTTGTCA 60.094 33.333 0.00 0.00 33.64 3.58
2892 5447 1.349234 TGTCGAATGTGCAGTCATCG 58.651 50.000 0.00 0.00 0.00 3.84
2918 5475 4.641541 TGACTGATATCACATTGGGCTTTG 59.358 41.667 0.00 0.00 0.00 2.77
2932 5489 2.296190 GGGCTTTGTTTGTACTCTTGGG 59.704 50.000 0.00 0.00 0.00 4.12
3003 5560 6.449635 AAACTTTGTGTCTGTTGCTCATAA 57.550 33.333 0.00 0.00 0.00 1.90
3169 5732 5.212532 TGTTATTGCCAGCTGTTTGAATT 57.787 34.783 13.81 0.00 0.00 2.17
3245 5998 3.188460 TCCAAACGAGTAAATGCTGCTTC 59.812 43.478 0.00 0.00 0.00 3.86
3260 6013 4.154737 TGCTGCTTCATAGACACAAACATC 59.845 41.667 0.00 0.00 0.00 3.06
3265 6018 7.085746 TGCTTCATAGACACAAACATCAATTG 58.914 34.615 0.00 0.00 0.00 2.32
3528 6285 3.748083 AGTGTACCAGAACTCGTAGTCA 58.252 45.455 0.00 0.00 0.00 3.41
3587 6359 6.202188 ACGTTTACATAATATGCTGTACTGGC 59.798 38.462 0.00 3.41 0.00 4.85
3649 6421 8.893219 TTGGAGCTTAACTATATCATCACTTG 57.107 34.615 0.00 0.00 0.00 3.16
3669 6441 3.467843 TGTACTACTCCCAGACTCCCTA 58.532 50.000 0.00 0.00 0.00 3.53
3968 6867 6.171921 ACCTCTTTCATCAGATGTTCAGAAG 58.828 40.000 10.34 6.76 0.00 2.85
3988 6890 1.707632 CCATAGTCGCTCTGCTATGC 58.292 55.000 0.00 0.00 41.72 3.14
4433 7345 2.232941 CTCAAAATCATGTGCCCTGCTT 59.767 45.455 0.00 0.00 0.00 3.91
4521 7436 2.485814 GCAGTGCTCTTTCCTTTGTAGG 59.514 50.000 8.18 0.00 43.46 3.18
4838 7996 2.004733 ACGCTGCCTTTTCCGTTATAC 58.995 47.619 0.00 0.00 0.00 1.47
4864 8022 3.056607 ACAACCAGTTTGCCTATTGATGC 60.057 43.478 0.00 0.00 39.01 3.91
4868 8026 3.514645 CAGTTTGCCTATTGATGCAACC 58.485 45.455 0.00 0.00 46.32 3.77
4973 8131 7.929941 AGAGGAAAGGTATGTTTTGATCTTC 57.070 36.000 0.00 0.00 0.00 2.87
5066 8224 4.256983 TGGGGGCACATTATGAACATAA 57.743 40.909 9.23 9.23 37.64 1.90
5097 8255 9.665719 TTGAAGTGATTTGCTGAACTATATACA 57.334 29.630 0.00 0.00 0.00 2.29
5154 8312 7.944554 AGAGGTTGTTTGAATATTCTCCTTTCA 59.055 33.333 16.24 5.05 0.00 2.69
5155 8313 7.886338 AGGTTGTTTGAATATTCTCCTTTCAC 58.114 34.615 16.24 5.03 0.00 3.18
5156 8314 7.725844 AGGTTGTTTGAATATTCTCCTTTCACT 59.274 33.333 16.24 3.99 0.00 3.41
5157 8315 9.010029 GGTTGTTTGAATATTCTCCTTTCACTA 57.990 33.333 16.24 0.00 0.00 2.74
5159 8317 9.793259 TTGTTTGAATATTCTCCTTTCACTAGT 57.207 29.630 16.24 0.00 0.00 2.57
5160 8318 9.436957 TGTTTGAATATTCTCCTTTCACTAGTC 57.563 33.333 16.24 0.00 0.00 2.59
5161 8319 9.436957 GTTTGAATATTCTCCTTTCACTAGTCA 57.563 33.333 16.24 0.00 0.00 3.41
5164 8322 9.605275 TGAATATTCTCCTTTCACTAGTCAATG 57.395 33.333 16.24 0.00 0.00 2.82
5165 8323 9.606631 GAATATTCTCCTTTCACTAGTCAATGT 57.393 33.333 8.27 0.00 0.00 2.71
5166 8324 8.954950 ATATTCTCCTTTCACTAGTCAATGTG 57.045 34.615 0.00 0.00 35.68 3.21
5167 8325 5.808366 TCTCCTTTCACTAGTCAATGTGT 57.192 39.130 0.00 0.00 35.82 3.72
5168 8326 6.911250 TCTCCTTTCACTAGTCAATGTGTA 57.089 37.500 0.00 0.00 35.82 2.90
5169 8327 6.688578 TCTCCTTTCACTAGTCAATGTGTAC 58.311 40.000 0.00 0.00 35.82 2.90
5170 8328 5.466819 TCCTTTCACTAGTCAATGTGTACG 58.533 41.667 0.00 0.00 35.82 3.67
5171 8329 5.010314 TCCTTTCACTAGTCAATGTGTACGT 59.990 40.000 0.00 0.00 35.82 3.57
5172 8330 5.118664 CCTTTCACTAGTCAATGTGTACGTG 59.881 44.000 0.00 0.00 35.82 4.49
5173 8331 3.571571 TCACTAGTCAATGTGTACGTGC 58.428 45.455 0.00 0.00 35.82 5.34
5174 8332 3.004944 TCACTAGTCAATGTGTACGTGCA 59.995 43.478 0.82 0.82 35.82 4.57
5175 8333 3.738791 CACTAGTCAATGTGTACGTGCAA 59.261 43.478 8.25 0.00 0.00 4.08
5176 8334 4.388773 CACTAGTCAATGTGTACGTGCAAT 59.611 41.667 8.25 1.77 0.00 3.56
5177 8335 3.811722 AGTCAATGTGTACGTGCAATG 57.188 42.857 8.25 8.35 0.00 2.82
5178 8336 2.095768 AGTCAATGTGTACGTGCAATGC 60.096 45.455 8.25 0.00 0.00 3.56
5179 8337 1.876156 TCAATGTGTACGTGCAATGCA 59.124 42.857 8.25 2.72 35.60 3.96
5191 8349 3.650070 TGCAATGCACGTTAATTTGGA 57.350 38.095 2.72 0.00 31.71 3.53
5192 8350 3.982475 TGCAATGCACGTTAATTTGGAA 58.018 36.364 2.72 0.00 31.71 3.53
5193 8351 3.986572 TGCAATGCACGTTAATTTGGAAG 59.013 39.130 2.72 0.00 31.71 3.46
5194 8352 3.987220 GCAATGCACGTTAATTTGGAAGT 59.013 39.130 0.00 0.00 0.00 3.01
5195 8353 5.157781 GCAATGCACGTTAATTTGGAAGTA 58.842 37.500 0.00 0.00 0.00 2.24
5196 8354 5.804979 GCAATGCACGTTAATTTGGAAGTAT 59.195 36.000 0.00 0.00 0.00 2.12
5197 8355 6.970043 GCAATGCACGTTAATTTGGAAGTATA 59.030 34.615 0.00 0.00 0.00 1.47
5198 8356 7.647715 GCAATGCACGTTAATTTGGAAGTATAT 59.352 33.333 0.00 0.00 0.00 0.86
5199 8357 9.515020 CAATGCACGTTAATTTGGAAGTATATT 57.485 29.630 0.00 0.00 0.00 1.28
5210 8368 5.922739 TGGAAGTATATTAAGTGCATGCG 57.077 39.130 14.09 0.00 0.00 4.73
5211 8369 4.754618 TGGAAGTATATTAAGTGCATGCGG 59.245 41.667 14.09 0.00 0.00 5.69
5212 8370 4.994852 GGAAGTATATTAAGTGCATGCGGA 59.005 41.667 14.09 0.00 0.00 5.54
5213 8371 5.643777 GGAAGTATATTAAGTGCATGCGGAT 59.356 40.000 14.09 3.59 0.00 4.18
5214 8372 6.816640 GGAAGTATATTAAGTGCATGCGGATA 59.183 38.462 14.09 6.94 0.00 2.59
5215 8373 7.495934 GGAAGTATATTAAGTGCATGCGGATAT 59.504 37.037 14.09 13.06 0.00 1.63
5216 8374 8.792830 AAGTATATTAAGTGCATGCGGATATT 57.207 30.769 14.09 5.62 0.00 1.28
5217 8375 9.884636 AAGTATATTAAGTGCATGCGGATATTA 57.115 29.630 14.09 4.65 0.00 0.98
5218 8376 9.884636 AGTATATTAAGTGCATGCGGATATTAA 57.115 29.630 14.09 12.83 0.00 1.40
5220 8378 8.792830 ATATTAAGTGCATGCGGATATTAAGT 57.207 30.769 14.09 4.58 0.00 2.24
5221 8379 9.884636 ATATTAAGTGCATGCGGATATTAAGTA 57.115 29.630 14.09 8.17 0.00 2.24
5222 8380 7.652300 TTAAGTGCATGCGGATATTAAGTAG 57.348 36.000 14.09 0.00 0.00 2.57
5223 8381 4.569943 AGTGCATGCGGATATTAAGTAGG 58.430 43.478 14.09 0.00 0.00 3.18
5224 8382 4.283467 AGTGCATGCGGATATTAAGTAGGA 59.717 41.667 14.09 0.00 0.00 2.94
5225 8383 5.046304 AGTGCATGCGGATATTAAGTAGGAT 60.046 40.000 14.09 0.00 0.00 3.24
5226 8384 6.154534 AGTGCATGCGGATATTAAGTAGGATA 59.845 38.462 14.09 0.00 0.00 2.59
5227 8385 6.986817 GTGCATGCGGATATTAAGTAGGATAT 59.013 38.462 14.09 0.00 0.00 1.63
5228 8386 7.495934 GTGCATGCGGATATTAAGTAGGATATT 59.504 37.037 14.09 0.00 0.00 1.28
5229 8387 8.700973 TGCATGCGGATATTAAGTAGGATATTA 58.299 33.333 14.09 0.00 0.00 0.98
5230 8388 9.712305 GCATGCGGATATTAAGTAGGATATTAT 57.288 33.333 0.00 0.00 0.00 1.28
5284 8442 8.967664 ATTATTTGGCATGAAATTAACTGCAT 57.032 26.923 0.00 0.00 36.34 3.96
5285 8443 6.671614 ATTTGGCATGAAATTAACTGCATG 57.328 33.333 0.21 0.21 40.69 4.06
5292 8450 6.914935 CATGAAATTAACTGCATGCTAAACG 58.085 36.000 20.33 4.73 32.73 3.60
5293 8451 6.007936 TGAAATTAACTGCATGCTAAACGT 57.992 33.333 20.33 5.37 0.00 3.99
5294 8452 5.855925 TGAAATTAACTGCATGCTAAACGTG 59.144 36.000 20.33 3.02 38.41 4.49
5295 8453 5.371115 AATTAACTGCATGCTAAACGTGT 57.629 34.783 20.33 3.63 37.62 4.49
5296 8454 4.822036 TTAACTGCATGCTAAACGTGTT 57.178 36.364 20.33 13.31 37.62 3.32
5297 8455 2.686558 ACTGCATGCTAAACGTGTTG 57.313 45.000 20.33 0.00 37.62 3.33
5298 8456 2.217750 ACTGCATGCTAAACGTGTTGA 58.782 42.857 20.33 0.00 37.62 3.18
5299 8457 2.224079 ACTGCATGCTAAACGTGTTGAG 59.776 45.455 20.33 5.48 37.62 3.02
5300 8458 1.069296 TGCATGCTAAACGTGTTGAGC 60.069 47.619 20.33 14.06 45.32 4.26
5302 8460 4.417240 GCTAAACGTGTTGAGCGC 57.583 55.556 6.34 0.00 37.32 5.92
5303 8461 1.860078 GCTAAACGTGTTGAGCGCT 59.140 52.632 11.27 11.27 37.32 5.92
5304 8462 0.179248 GCTAAACGTGTTGAGCGCTC 60.179 55.000 30.42 30.42 37.32 5.03
5305 8463 0.091344 CTAAACGTGTTGAGCGCTCG 59.909 55.000 30.75 21.89 0.00 5.03
5306 8464 0.318022 TAAACGTGTTGAGCGCTCGA 60.318 50.000 30.75 27.40 0.00 4.04
5307 8465 1.818221 AAACGTGTTGAGCGCTCGAC 61.818 55.000 39.44 39.44 42.86 4.20
5310 8468 4.673403 TGTTGAGCGCTCGACATT 57.327 50.000 42.95 9.77 46.09 2.71
5311 8469 2.153039 TGTTGAGCGCTCGACATTG 58.847 52.632 42.95 0.00 46.09 2.82
5312 8470 0.319469 TGTTGAGCGCTCGACATTGA 60.319 50.000 42.95 27.81 46.09 2.57
5313 8471 0.790207 GTTGAGCGCTCGACATTGAA 59.210 50.000 40.41 22.88 42.27 2.69
5314 8472 1.070821 TTGAGCGCTCGACATTGAAG 58.929 50.000 30.75 0.00 0.00 3.02
5315 8473 1.346538 GAGCGCTCGACATTGAAGC 59.653 57.895 23.61 0.00 0.00 3.86
5316 8474 1.354337 GAGCGCTCGACATTGAAGCA 61.354 55.000 23.61 0.00 0.00 3.91
5317 8475 1.059994 GCGCTCGACATTGAAGCAG 59.940 57.895 0.00 5.34 0.00 4.24
5318 8476 1.630244 GCGCTCGACATTGAAGCAGT 61.630 55.000 0.00 0.00 0.00 4.40
5319 8477 1.629013 CGCTCGACATTGAAGCAGTA 58.371 50.000 9.76 0.00 0.00 2.74
5320 8478 2.196749 CGCTCGACATTGAAGCAGTAT 58.803 47.619 9.76 0.00 0.00 2.12
5321 8479 3.372060 CGCTCGACATTGAAGCAGTATA 58.628 45.455 9.76 0.00 0.00 1.47
5322 8480 3.423536 CGCTCGACATTGAAGCAGTATAG 59.576 47.826 9.76 0.00 0.00 1.31
5323 8481 3.738282 GCTCGACATTGAAGCAGTATAGG 59.262 47.826 0.00 0.00 0.00 2.57
5324 8482 4.737946 GCTCGACATTGAAGCAGTATAGGT 60.738 45.833 0.00 0.00 0.00 3.08
5325 8483 4.933330 TCGACATTGAAGCAGTATAGGTC 58.067 43.478 0.00 0.00 0.00 3.85
5326 8484 3.731216 CGACATTGAAGCAGTATAGGTCG 59.269 47.826 0.00 0.00 39.41 4.79
5327 8485 4.683832 GACATTGAAGCAGTATAGGTCGT 58.316 43.478 0.00 0.00 0.00 4.34
5328 8486 5.086104 ACATTGAAGCAGTATAGGTCGTT 57.914 39.130 0.00 0.00 0.00 3.85
5329 8487 4.870426 ACATTGAAGCAGTATAGGTCGTTG 59.130 41.667 0.00 0.00 0.00 4.10
5330 8488 3.520290 TGAAGCAGTATAGGTCGTTGG 57.480 47.619 0.00 0.00 0.00 3.77
5331 8489 3.093814 TGAAGCAGTATAGGTCGTTGGA 58.906 45.455 0.00 0.00 0.00 3.53
5332 8490 3.704566 TGAAGCAGTATAGGTCGTTGGAT 59.295 43.478 0.00 0.00 0.00 3.41
5333 8491 4.161565 TGAAGCAGTATAGGTCGTTGGATT 59.838 41.667 0.00 0.00 0.00 3.01
5334 8492 4.060038 AGCAGTATAGGTCGTTGGATTG 57.940 45.455 0.00 0.00 0.00 2.67
5335 8493 3.704566 AGCAGTATAGGTCGTTGGATTGA 59.295 43.478 0.00 0.00 0.00 2.57
5336 8494 3.802685 GCAGTATAGGTCGTTGGATTGAC 59.197 47.826 0.00 0.00 0.00 3.18
5337 8495 4.679639 GCAGTATAGGTCGTTGGATTGACA 60.680 45.833 0.00 0.00 36.83 3.58
5338 8496 5.601662 CAGTATAGGTCGTTGGATTGACAT 58.398 41.667 0.00 0.00 36.83 3.06
5339 8497 5.463392 CAGTATAGGTCGTTGGATTGACATG 59.537 44.000 0.00 0.00 36.83 3.21
5340 8498 4.753516 ATAGGTCGTTGGATTGACATGA 57.246 40.909 0.00 0.00 36.83 3.07
5341 8499 3.634397 AGGTCGTTGGATTGACATGAT 57.366 42.857 0.00 0.00 36.83 2.45
5342 8500 3.955471 AGGTCGTTGGATTGACATGATT 58.045 40.909 0.00 0.00 36.83 2.57
5343 8501 4.335416 AGGTCGTTGGATTGACATGATTT 58.665 39.130 0.00 0.00 36.83 2.17
5344 8502 4.156556 AGGTCGTTGGATTGACATGATTTG 59.843 41.667 0.00 0.00 36.83 2.32
5345 8503 4.155826 GGTCGTTGGATTGACATGATTTGA 59.844 41.667 0.00 0.00 36.83 2.69
5346 8504 5.163622 GGTCGTTGGATTGACATGATTTGAT 60.164 40.000 0.00 0.00 36.83 2.57
5347 8505 5.740569 GTCGTTGGATTGACATGATTTGATG 59.259 40.000 0.00 0.00 35.20 3.07
5348 8506 5.038683 CGTTGGATTGACATGATTTGATGG 58.961 41.667 0.00 0.00 0.00 3.51
5349 8507 4.659111 TGGATTGACATGATTTGATGGC 57.341 40.909 0.00 0.00 0.00 4.40
5350 8508 3.385433 TGGATTGACATGATTTGATGGCC 59.615 43.478 0.00 0.00 29.16 5.36
5351 8509 3.551454 GGATTGACATGATTTGATGGCCG 60.551 47.826 0.00 0.00 29.16 6.13
5352 8510 2.416680 TGACATGATTTGATGGCCGA 57.583 45.000 0.00 0.00 29.16 5.54
5353 8511 2.291365 TGACATGATTTGATGGCCGAG 58.709 47.619 0.00 0.00 29.16 4.63
5354 8512 2.093021 TGACATGATTTGATGGCCGAGA 60.093 45.455 0.00 0.00 29.16 4.04
5355 8513 3.144506 GACATGATTTGATGGCCGAGAT 58.855 45.455 0.00 0.00 0.00 2.75
5356 8514 3.559069 ACATGATTTGATGGCCGAGATT 58.441 40.909 0.00 0.00 0.00 2.40
5357 8515 4.717877 ACATGATTTGATGGCCGAGATTA 58.282 39.130 0.00 0.00 0.00 1.75
5358 8516 5.132502 ACATGATTTGATGGCCGAGATTAA 58.867 37.500 0.00 0.00 0.00 1.40
5359 8517 5.771666 ACATGATTTGATGGCCGAGATTAAT 59.228 36.000 0.00 0.00 0.00 1.40
5360 8518 6.266103 ACATGATTTGATGGCCGAGATTAATT 59.734 34.615 0.00 0.00 0.00 1.40
5361 8519 6.075762 TGATTTGATGGCCGAGATTAATTG 57.924 37.500 0.00 0.00 0.00 2.32
5362 8520 4.916983 TTTGATGGCCGAGATTAATTGG 57.083 40.909 0.00 0.00 0.00 3.16
5363 8521 3.855255 TGATGGCCGAGATTAATTGGA 57.145 42.857 0.00 0.00 0.00 3.53
5364 8522 4.371624 TGATGGCCGAGATTAATTGGAT 57.628 40.909 0.00 0.00 0.00 3.41
5365 8523 4.326826 TGATGGCCGAGATTAATTGGATC 58.673 43.478 0.00 0.00 0.00 3.36
5366 8524 4.042062 TGATGGCCGAGATTAATTGGATCT 59.958 41.667 0.00 6.01 36.60 2.75
5367 8525 3.743521 TGGCCGAGATTAATTGGATCTG 58.256 45.455 9.96 4.52 34.13 2.90
5368 8526 2.485814 GGCCGAGATTAATTGGATCTGC 59.514 50.000 9.96 8.37 34.13 4.26
5369 8527 2.485814 GCCGAGATTAATTGGATCTGCC 59.514 50.000 9.96 0.00 34.13 4.85
5370 8528 3.077359 CCGAGATTAATTGGATCTGCCC 58.923 50.000 9.96 0.00 34.13 5.36
5371 8529 3.077359 CGAGATTAATTGGATCTGCCCC 58.923 50.000 9.96 0.00 34.13 5.80
5372 8530 3.244700 CGAGATTAATTGGATCTGCCCCT 60.245 47.826 9.96 0.00 34.13 4.79
5373 8531 4.734266 GAGATTAATTGGATCTGCCCCTT 58.266 43.478 9.96 0.00 34.13 3.95
5374 8532 5.143369 GAGATTAATTGGATCTGCCCCTTT 58.857 41.667 9.96 0.00 34.13 3.11
5375 8533 4.897670 AGATTAATTGGATCTGCCCCTTTG 59.102 41.667 5.62 0.00 32.79 2.77
5376 8534 1.870064 AATTGGATCTGCCCCTTTGG 58.130 50.000 0.00 0.00 34.97 3.28
5392 8550 6.867519 CCCTTTGGGTCTTTTTATATTGGT 57.132 37.500 0.00 0.00 38.25 3.67
5393 8551 7.964666 CCCTTTGGGTCTTTTTATATTGGTA 57.035 36.000 0.00 0.00 38.25 3.25
5394 8552 8.547481 CCCTTTGGGTCTTTTTATATTGGTAT 57.453 34.615 0.00 0.00 38.25 2.73
5395 8553 9.649316 CCCTTTGGGTCTTTTTATATTGGTATA 57.351 33.333 0.00 0.00 38.25 1.47
5425 8583 8.537728 TCTATTCCATTCTAAAATGCCACAAT 57.462 30.769 0.00 0.00 40.85 2.71
5855 10251 5.645497 AGATTCTGCATGTTAACTTCTGACC 59.355 40.000 7.22 1.71 0.00 4.02
5896 10293 6.591935 AGGTCACTCTTTCATTGTAGTTTCA 58.408 36.000 0.00 0.00 0.00 2.69
5897 10294 7.227156 AGGTCACTCTTTCATTGTAGTTTCAT 58.773 34.615 0.00 0.00 0.00 2.57
5898 10295 7.721399 AGGTCACTCTTTCATTGTAGTTTCATT 59.279 33.333 0.00 0.00 0.00 2.57
5899 10296 7.805071 GGTCACTCTTTCATTGTAGTTTCATTG 59.195 37.037 0.00 0.00 0.00 2.82
5900 10297 7.324616 GTCACTCTTTCATTGTAGTTTCATTGC 59.675 37.037 0.00 0.00 0.00 3.56
5901 10298 7.013178 TCACTCTTTCATTGTAGTTTCATTGCA 59.987 33.333 0.00 0.00 0.00 4.08
5902 10299 7.325338 CACTCTTTCATTGTAGTTTCATTGCAG 59.675 37.037 0.00 0.00 0.00 4.41
5903 10300 7.013655 ACTCTTTCATTGTAGTTTCATTGCAGT 59.986 33.333 0.00 0.00 0.00 4.40
5904 10301 7.715657 TCTTTCATTGTAGTTTCATTGCAGTT 58.284 30.769 0.00 0.00 0.00 3.16
5905 10302 8.196771 TCTTTCATTGTAGTTTCATTGCAGTTT 58.803 29.630 0.00 0.00 0.00 2.66
5906 10303 8.715191 TTTCATTGTAGTTTCATTGCAGTTTT 57.285 26.923 0.00 0.00 0.00 2.43
6089 10499 1.066573 AGCACTACAGCTCGAGCATTT 60.067 47.619 36.87 22.74 42.18 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 6.510296 ACTCTGGGATAGATGATGTATGGAT 58.490 40.000 0.00 0.00 34.21 3.41
70 71 6.579666 GTCAATATTTCGTTGCGGTTTAAGTT 59.420 34.615 0.00 0.00 0.00 2.66
142 143 7.384524 AGATGGATCATAAAGAAGTCATCCA 57.615 36.000 1.06 1.06 43.04 3.41
143 144 7.935755 TGAAGATGGATCATAAAGAAGTCATCC 59.064 37.037 0.00 0.00 34.44 3.51
144 145 8.899427 TGAAGATGGATCATAAAGAAGTCATC 57.101 34.615 0.00 0.00 34.28 2.92
146 147 7.554118 GGTTGAAGATGGATCATAAAGAAGTCA 59.446 37.037 0.00 0.00 0.00 3.41
157 158 5.131475 TGATGATGAGGTTGAAGATGGATCA 59.869 40.000 0.00 0.00 0.00 2.92
175 176 3.548745 TCCGACAGATTGCTTGATGAT 57.451 42.857 0.00 0.00 0.00 2.45
199 200 5.875224 TCTGTAGGAAACACATTTGGATGA 58.125 37.500 0.00 0.00 36.73 2.92
207 208 7.639113 TGTTCTTTTTCTGTAGGAAACACAT 57.361 32.000 0.00 0.00 42.80 3.21
217 218 7.060421 AGGAAACCTGATGTTCTTTTTCTGTA 58.940 34.615 0.00 0.00 35.67 2.74
247 248 5.891551 TGAGGGCCCTTCTTAATGTTAAATC 59.108 40.000 29.39 7.74 0.00 2.17
276 277 2.680352 GGTCTCCTCCAGGACGCA 60.680 66.667 0.00 0.00 39.78 5.24
297 298 8.364129 TGATGAAACTTTTTAGTTGGAATTGC 57.636 30.769 0.00 0.00 31.64 3.56
311 312 6.741992 TCAATATCACGCTGATGAAACTTT 57.258 33.333 9.77 0.00 37.70 2.66
329 330 7.020827 AGGAGAAGTTGAGTTCCAATCAATA 57.979 36.000 0.00 0.00 38.81 1.90
377 378 7.706607 TCGTCTTGATTGAAGGAGTATATGTTG 59.293 37.037 0.00 0.00 31.85 3.33
382 383 5.220989 CCGTCGTCTTGATTGAAGGAGTATA 60.221 44.000 0.00 0.00 33.76 1.47
393 394 3.607741 TCTCTACTCCGTCGTCTTGATT 58.392 45.455 0.00 0.00 0.00 2.57
402 403 3.537580 AGATGTGTCTCTCTACTCCGTC 58.462 50.000 0.00 0.00 0.00 4.79
418 419 5.364157 GTGAAAGGTCTCCCATAGTAGATGT 59.636 44.000 0.00 0.00 0.00 3.06
438 439 1.202604 GGTCTTGGTTGTCTCCGTGAA 60.203 52.381 0.00 0.00 0.00 3.18
449 450 2.775384 TGTGTGTTAGGAGGTCTTGGTT 59.225 45.455 0.00 0.00 0.00 3.67
464 465 4.248859 GCTGTCTCTCATTATGTGTGTGT 58.751 43.478 0.00 0.00 0.00 3.72
465 466 3.620374 GGCTGTCTCTCATTATGTGTGTG 59.380 47.826 0.00 0.00 0.00 3.82
467 468 3.620374 GTGGCTGTCTCTCATTATGTGTG 59.380 47.826 0.00 0.00 0.00 3.82
469 470 2.862536 CGTGGCTGTCTCTCATTATGTG 59.137 50.000 0.00 0.00 0.00 3.21
471 472 3.119291 GTCGTGGCTGTCTCTCATTATG 58.881 50.000 0.00 0.00 0.00 1.90
473 474 1.132453 CGTCGTGGCTGTCTCTCATTA 59.868 52.381 0.00 0.00 0.00 1.90
475 476 1.244697 ACGTCGTGGCTGTCTCTCAT 61.245 55.000 0.00 0.00 0.00 2.90
476 477 1.853114 GACGTCGTGGCTGTCTCTCA 61.853 60.000 0.63 0.00 0.00 3.27
500 520 0.959867 TGTTGTCCCATGATGGCGTG 60.960 55.000 5.79 0.00 35.79 5.34
509 529 1.748879 CCGGCGATTGTTGTCCCAT 60.749 57.895 9.30 0.00 0.00 4.00
511 531 3.810896 GCCGGCGATTGTTGTCCC 61.811 66.667 12.58 0.00 0.00 4.46
557 577 4.700365 GTTTTGCTGGCCCGTCGC 62.700 66.667 0.00 0.00 0.00 5.19
558 578 4.038080 GGTTTTGCTGGCCCGTCG 62.038 66.667 0.00 0.00 0.00 5.12
559 579 2.757980 TAGGGTTTTGCTGGCCCGTC 62.758 60.000 0.00 0.00 46.69 4.79
560 580 2.764637 CTAGGGTTTTGCTGGCCCGT 62.765 60.000 0.00 0.00 46.69 5.28
561 581 2.034999 TAGGGTTTTGCTGGCCCG 59.965 61.111 0.00 0.00 46.69 6.13
582 602 1.222113 GTTAGGAGAGCACCCAGGC 59.778 63.158 0.00 0.00 0.00 4.85
603 623 1.997669 AACTTCGCTCGGTCTCAATC 58.002 50.000 0.00 0.00 0.00 2.67
630 650 6.295688 GGGAGGCGGATTAATATTTCTCTGTA 60.296 42.308 0.00 0.00 0.00 2.74
632 652 4.938226 GGGAGGCGGATTAATATTTCTCTG 59.062 45.833 0.00 0.00 0.00 3.35
645 665 0.631212 AAAATTCCTGGGAGGCGGAT 59.369 50.000 0.00 0.00 34.61 4.18
646 666 0.323360 CAAAATTCCTGGGAGGCGGA 60.323 55.000 0.00 0.00 34.61 5.54
648 668 2.122783 TACAAAATTCCTGGGAGGCG 57.877 50.000 0.00 0.00 34.61 5.52
697 727 1.968493 AGAGACGGACACCAAAAGCTA 59.032 47.619 0.00 0.00 0.00 3.32
702 739 0.471211 AGGGAGAGACGGACACCAAA 60.471 55.000 0.00 0.00 0.00 3.28
741 781 3.924686 CGTTGAGACGCTTTTACATAGGT 59.075 43.478 0.00 0.00 43.03 3.08
774 814 4.807643 GCATACCATGGAAATAGGACTCCC 60.808 50.000 21.47 0.00 0.00 4.30
830 870 5.752955 TGCCTAAAATCTTCAACAAACTTGC 59.247 36.000 0.00 0.00 0.00 4.01
834 874 6.088085 CGTGATGCCTAAAATCTTCAACAAAC 59.912 38.462 0.00 0.00 0.00 2.93
1158 1202 0.535335 GAGGACTTGTGGCGGATGTA 59.465 55.000 0.00 0.00 0.00 2.29
1172 1216 4.200283 CGGGCAGCTCGAGAGGAC 62.200 72.222 18.75 9.01 0.00 3.85
1257 1301 0.464013 CGTAGGAGGAAGAGGAGCGA 60.464 60.000 0.00 0.00 0.00 4.93
1571 1630 8.712285 AATCAAATGCAATCAACTCTAAATGG 57.288 30.769 0.00 0.00 0.00 3.16
1603 1665 2.285602 CGGCGCATACAAAGTGTCATAC 60.286 50.000 10.83 0.00 0.00 2.39
1604 1666 1.930503 CGGCGCATACAAAGTGTCATA 59.069 47.619 10.83 0.00 0.00 2.15
1740 1802 4.130118 GTTGACAATCTCACAACCTCTGT 58.870 43.478 0.00 0.00 38.20 3.41
2137 2200 7.890515 TGTAAATTTGATGTTTGCAGATGGTA 58.109 30.769 0.00 0.00 29.77 3.25
2368 4918 7.277981 GTGTATCTGTGGATGGTTACAGTTAAG 59.722 40.741 0.00 0.00 43.59 1.85
2630 5180 0.665835 TGACCCACATTGAAACGCAC 59.334 50.000 0.00 0.00 0.00 5.34
2674 5224 7.077605 CGCAATGAAACAGTAATGAAGAAGAA 58.922 34.615 0.00 0.00 0.00 2.52
2682 5232 3.825308 AGCACGCAATGAAACAGTAATG 58.175 40.909 0.00 0.00 0.00 1.90
2685 5235 3.120820 CGTTAGCACGCAATGAAACAGTA 60.121 43.478 0.00 0.00 40.18 2.74
2762 5312 3.265737 TGGCAACCCAGATGTAGTGTAAT 59.734 43.478 0.00 0.00 35.79 1.89
2859 5414 6.267817 CACATTCGACATTGCTATGGAATTT 58.732 36.000 12.77 3.69 36.01 1.82
2867 5422 2.672874 GACTGCACATTCGACATTGCTA 59.327 45.455 11.43 0.31 35.91 3.49
2892 5447 3.480470 CCCAATGTGATATCAGTCACCC 58.520 50.000 5.42 0.00 46.17 4.61
2918 5475 1.798813 CGAGTGCCCAAGAGTACAAAC 59.201 52.381 0.00 0.00 0.00 2.93
2932 5489 0.173708 CCTCAGTAGGTTCCGAGTGC 59.826 60.000 2.61 0.00 38.19 4.40
3029 5586 5.398603 AACAGTTGGTGTGAACATTCAAA 57.601 34.783 0.00 0.00 40.26 2.69
3084 5647 8.268850 AGCACTAGACACAAGGTTTAATATTG 57.731 34.615 0.00 0.00 0.00 1.90
3151 5714 9.101655 GATAATTAAATTCAAACAGCTGGCAAT 57.898 29.630 19.93 7.23 0.00 3.56
3224 5977 3.058293 TGAAGCAGCATTTACTCGTTTGG 60.058 43.478 0.00 0.00 0.00 3.28
3245 5998 6.864685 ACTTGCAATTGATGTTTGTGTCTATG 59.135 34.615 10.34 0.00 0.00 2.23
3310 6063 3.008594 ACGATGGAACCCAATACACAGAA 59.991 43.478 0.00 0.00 36.95 3.02
3564 6321 6.590357 CGCCAGTACAGCATATTATGTAAAC 58.410 40.000 8.42 0.54 33.89 2.01
3587 6359 4.156190 TCTTCCTAACTTCTACTGAGTGCG 59.844 45.833 0.00 0.00 0.00 5.34
3649 6421 4.516652 TTAGGGAGTCTGGGAGTAGTAC 57.483 50.000 0.00 0.00 0.00 2.73
3777 6675 9.894783 GAGAAAAGGTCAAAAGGAAATAACTAC 57.105 33.333 0.00 0.00 0.00 2.73
3948 6847 4.698780 TGGCTTCTGAACATCTGATGAAAG 59.301 41.667 23.59 15.93 0.00 2.62
3952 6851 5.366460 ACTATGGCTTCTGAACATCTGATG 58.634 41.667 15.83 15.83 0.00 3.07
3968 6867 1.707632 CATAGCAGAGCGACTATGGC 58.292 55.000 9.23 0.00 41.27 4.40
3988 6890 8.633075 ATCATGTTAAATGCTTCAAAATACCG 57.367 30.769 0.00 0.00 0.00 4.02
4433 7345 9.513906 TGTATTCATCCACAATCTGTTAAGAAA 57.486 29.630 0.00 0.00 35.59 2.52
4838 7996 4.759693 TCAATAGGCAAACTGGTTGTACAG 59.240 41.667 7.35 0.00 44.03 2.74
4864 8022 2.158900 AGAAGGCATAGGACATCGGTTG 60.159 50.000 0.00 0.00 0.00 3.77
4868 8026 1.967066 AGGAGAAGGCATAGGACATCG 59.033 52.381 0.00 0.00 0.00 3.84
4973 8131 3.279434 GCTACTACCATTTTCAGGTGGG 58.721 50.000 0.00 0.00 41.45 4.61
5066 8224 7.516198 AGTTCAGCAAATCACTTCAAGTATT 57.484 32.000 0.00 0.00 0.00 1.89
5097 8255 7.563020 AGACTGAACATGACAGATGACATAAT 58.437 34.615 23.24 5.48 38.55 1.28
5101 8259 4.879197 AGACTGAACATGACAGATGACA 57.121 40.909 23.24 0.00 38.55 3.58
5102 8260 7.840342 AATAAGACTGAACATGACAGATGAC 57.160 36.000 23.24 14.24 38.55 3.06
5103 8261 9.591792 CTAAATAAGACTGAACATGACAGATGA 57.408 33.333 23.24 10.65 38.55 2.92
5104 8262 9.591792 TCTAAATAAGACTGAACATGACAGATG 57.408 33.333 23.24 6.36 38.55 2.90
5105 8263 9.814899 CTCTAAATAAGACTGAACATGACAGAT 57.185 33.333 23.24 14.45 38.55 2.90
5106 8264 8.253810 CCTCTAAATAAGACTGAACATGACAGA 58.746 37.037 23.24 8.24 38.55 3.41
5107 8265 8.037758 ACCTCTAAATAAGACTGAACATGACAG 58.962 37.037 17.82 17.82 40.68 3.51
5154 8312 3.653539 TGCACGTACACATTGACTAGT 57.346 42.857 0.00 0.00 0.00 2.57
5155 8313 4.724885 GCATTGCACGTACACATTGACTAG 60.725 45.833 3.15 0.00 0.00 2.57
5156 8314 3.124466 GCATTGCACGTACACATTGACTA 59.876 43.478 3.15 0.00 0.00 2.59
5157 8315 2.095768 GCATTGCACGTACACATTGACT 60.096 45.455 3.15 0.00 0.00 3.41
5158 8316 2.241722 GCATTGCACGTACACATTGAC 58.758 47.619 3.15 1.49 0.00 3.18
5159 8317 1.876156 TGCATTGCACGTACACATTGA 59.124 42.857 7.38 0.00 31.71 2.57
5160 8318 2.328655 TGCATTGCACGTACACATTG 57.671 45.000 7.38 0.00 31.71 2.82
5171 8329 3.650070 TCCAAATTAACGTGCATTGCA 57.350 38.095 7.38 7.38 35.60 4.08
5172 8330 3.987220 ACTTCCAAATTAACGTGCATTGC 59.013 39.130 0.46 0.46 0.00 3.56
5173 8331 9.515020 AATATACTTCCAAATTAACGTGCATTG 57.485 29.630 0.00 0.00 0.00 2.82
5184 8342 7.862372 CGCATGCACTTAATATACTTCCAAATT 59.138 33.333 19.57 0.00 0.00 1.82
5185 8343 7.362662 CGCATGCACTTAATATACTTCCAAAT 58.637 34.615 19.57 0.00 0.00 2.32
5186 8344 6.238621 CCGCATGCACTTAATATACTTCCAAA 60.239 38.462 19.57 0.00 0.00 3.28
5187 8345 5.238432 CCGCATGCACTTAATATACTTCCAA 59.762 40.000 19.57 0.00 0.00 3.53
5188 8346 4.754618 CCGCATGCACTTAATATACTTCCA 59.245 41.667 19.57 0.00 0.00 3.53
5189 8347 4.994852 TCCGCATGCACTTAATATACTTCC 59.005 41.667 19.57 0.00 0.00 3.46
5190 8348 6.727824 ATCCGCATGCACTTAATATACTTC 57.272 37.500 19.57 0.00 0.00 3.01
5191 8349 8.792830 AATATCCGCATGCACTTAATATACTT 57.207 30.769 19.57 0.00 0.00 2.24
5192 8350 9.884636 TTAATATCCGCATGCACTTAATATACT 57.115 29.630 19.57 2.37 0.00 2.12
5194 8352 9.884636 ACTTAATATCCGCATGCACTTAATATA 57.115 29.630 19.57 4.53 0.00 0.86
5195 8353 8.792830 ACTTAATATCCGCATGCACTTAATAT 57.207 30.769 19.57 9.48 0.00 1.28
5196 8354 9.366216 CTACTTAATATCCGCATGCACTTAATA 57.634 33.333 19.57 7.60 0.00 0.98
5197 8355 7.334421 CCTACTTAATATCCGCATGCACTTAAT 59.666 37.037 19.57 5.58 0.00 1.40
5198 8356 6.649141 CCTACTTAATATCCGCATGCACTTAA 59.351 38.462 19.57 11.55 0.00 1.85
5199 8357 6.014925 TCCTACTTAATATCCGCATGCACTTA 60.015 38.462 19.57 5.72 0.00 2.24
5200 8358 4.997395 CCTACTTAATATCCGCATGCACTT 59.003 41.667 19.57 3.39 0.00 3.16
5201 8359 4.283467 TCCTACTTAATATCCGCATGCACT 59.717 41.667 19.57 3.59 0.00 4.40
5202 8360 4.566004 TCCTACTTAATATCCGCATGCAC 58.434 43.478 19.57 0.00 0.00 4.57
5203 8361 4.882842 TCCTACTTAATATCCGCATGCA 57.117 40.909 19.57 0.00 0.00 3.96
5204 8362 9.712305 ATAATATCCTACTTAATATCCGCATGC 57.288 33.333 7.91 7.91 0.00 4.06
5259 8417 8.832521 CATGCAGTTAATTTCATGCCAAATAAT 58.167 29.630 0.00 0.00 37.89 1.28
5260 8418 8.199176 CATGCAGTTAATTTCATGCCAAATAA 57.801 30.769 0.00 0.00 37.89 1.40
5261 8419 7.773864 CATGCAGTTAATTTCATGCCAAATA 57.226 32.000 0.00 0.00 37.89 1.40
5262 8420 6.671614 CATGCAGTTAATTTCATGCCAAAT 57.328 33.333 0.00 0.00 37.89 2.32
5268 8426 6.527722 ACGTTTAGCATGCAGTTAATTTCATG 59.472 34.615 21.98 6.29 39.29 3.07
5269 8427 6.527722 CACGTTTAGCATGCAGTTAATTTCAT 59.472 34.615 21.98 0.00 0.00 2.57
5270 8428 5.855925 CACGTTTAGCATGCAGTTAATTTCA 59.144 36.000 21.98 0.00 0.00 2.69
5271 8429 5.856455 ACACGTTTAGCATGCAGTTAATTTC 59.144 36.000 21.98 3.63 0.00 2.17
5272 8430 5.768317 ACACGTTTAGCATGCAGTTAATTT 58.232 33.333 21.98 0.00 0.00 1.82
5273 8431 5.371115 ACACGTTTAGCATGCAGTTAATT 57.629 34.783 21.98 0.00 0.00 1.40
5274 8432 5.049060 TCAACACGTTTAGCATGCAGTTAAT 60.049 36.000 21.98 0.00 0.00 1.40
5275 8433 4.273724 TCAACACGTTTAGCATGCAGTTAA 59.726 37.500 21.98 7.14 0.00 2.01
5276 8434 3.810386 TCAACACGTTTAGCATGCAGTTA 59.190 39.130 21.98 0.00 0.00 2.24
5277 8435 2.616376 TCAACACGTTTAGCATGCAGTT 59.384 40.909 21.98 9.36 0.00 3.16
5278 8436 2.217750 TCAACACGTTTAGCATGCAGT 58.782 42.857 21.98 8.61 0.00 4.40
5279 8437 2.843077 CTCAACACGTTTAGCATGCAG 58.157 47.619 21.98 7.96 0.00 4.41
5280 8438 1.069296 GCTCAACACGTTTAGCATGCA 60.069 47.619 21.98 2.77 39.07 3.96
5281 8439 1.606606 GCTCAACACGTTTAGCATGC 58.393 50.000 10.51 10.51 39.07 4.06
5282 8440 1.869503 CGCTCAACACGTTTAGCATG 58.130 50.000 14.54 0.00 39.16 4.06
5283 8441 0.165944 GCGCTCAACACGTTTAGCAT 59.834 50.000 14.54 0.00 39.16 3.79
5284 8442 0.878523 AGCGCTCAACACGTTTAGCA 60.879 50.000 2.64 0.00 39.16 3.49
5285 8443 0.179248 GAGCGCTCAACACGTTTAGC 60.179 55.000 31.91 6.11 36.68 3.09
5286 8444 0.091344 CGAGCGCTCAACACGTTTAG 59.909 55.000 34.69 12.34 0.00 1.85
5287 8445 0.318022 TCGAGCGCTCAACACGTTTA 60.318 50.000 34.69 4.78 0.00 2.01
5288 8446 1.590525 TCGAGCGCTCAACACGTTT 60.591 52.632 34.69 0.00 0.00 3.60
5289 8447 2.027024 TCGAGCGCTCAACACGTT 59.973 55.556 34.69 0.00 0.00 3.99
5290 8448 2.729862 GTCGAGCGCTCAACACGT 60.730 61.111 34.69 0.00 0.00 4.49
5291 8449 1.617755 AATGTCGAGCGCTCAACACG 61.618 55.000 31.93 20.44 0.00 4.49
5292 8450 0.179240 CAATGTCGAGCGCTCAACAC 60.179 55.000 31.93 24.81 0.00 3.32
5293 8451 0.319469 TCAATGTCGAGCGCTCAACA 60.319 50.000 31.47 31.47 0.00 3.33
5294 8452 0.790207 TTCAATGTCGAGCGCTCAAC 59.210 50.000 34.69 28.50 0.00 3.18
5295 8453 1.070821 CTTCAATGTCGAGCGCTCAA 58.929 50.000 34.69 17.41 0.00 3.02
5296 8454 1.354337 GCTTCAATGTCGAGCGCTCA 61.354 55.000 34.69 18.66 0.00 4.26
5297 8455 1.346538 GCTTCAATGTCGAGCGCTC 59.653 57.895 27.64 27.64 0.00 5.03
5298 8456 1.357258 CTGCTTCAATGTCGAGCGCT 61.357 55.000 11.27 11.27 39.23 5.92
5299 8457 1.059994 CTGCTTCAATGTCGAGCGC 59.940 57.895 0.00 0.00 39.23 5.92
5300 8458 1.629013 TACTGCTTCAATGTCGAGCG 58.371 50.000 0.00 0.00 39.23 5.03
5301 8459 3.738282 CCTATACTGCTTCAATGTCGAGC 59.262 47.826 0.00 0.00 36.95 5.03
5302 8460 4.938080 ACCTATACTGCTTCAATGTCGAG 58.062 43.478 0.00 0.00 0.00 4.04
5303 8461 4.497507 CGACCTATACTGCTTCAATGTCGA 60.498 45.833 0.00 0.00 44.03 4.20
5304 8462 3.731216 CGACCTATACTGCTTCAATGTCG 59.269 47.826 0.00 0.00 37.37 4.35
5305 8463 4.683832 ACGACCTATACTGCTTCAATGTC 58.316 43.478 0.00 0.00 0.00 3.06
5306 8464 4.737855 ACGACCTATACTGCTTCAATGT 57.262 40.909 0.00 0.00 0.00 2.71
5307 8465 4.271049 CCAACGACCTATACTGCTTCAATG 59.729 45.833 0.00 0.00 0.00 2.82
5308 8466 4.161565 TCCAACGACCTATACTGCTTCAAT 59.838 41.667 0.00 0.00 0.00 2.57
5309 8467 3.512329 TCCAACGACCTATACTGCTTCAA 59.488 43.478 0.00 0.00 0.00 2.69
5310 8468 3.093814 TCCAACGACCTATACTGCTTCA 58.906 45.455 0.00 0.00 0.00 3.02
5311 8469 3.795623 TCCAACGACCTATACTGCTTC 57.204 47.619 0.00 0.00 0.00 3.86
5312 8470 4.161565 TCAATCCAACGACCTATACTGCTT 59.838 41.667 0.00 0.00 0.00 3.91
5313 8471 3.704566 TCAATCCAACGACCTATACTGCT 59.295 43.478 0.00 0.00 0.00 4.24
5314 8472 3.802685 GTCAATCCAACGACCTATACTGC 59.197 47.826 0.00 0.00 0.00 4.40
5315 8473 5.006153 TGTCAATCCAACGACCTATACTG 57.994 43.478 0.00 0.00 0.00 2.74
5316 8474 5.362717 TCATGTCAATCCAACGACCTATACT 59.637 40.000 0.00 0.00 0.00 2.12
5317 8475 5.597806 TCATGTCAATCCAACGACCTATAC 58.402 41.667 0.00 0.00 0.00 1.47
5318 8476 5.862678 TCATGTCAATCCAACGACCTATA 57.137 39.130 0.00 0.00 0.00 1.31
5319 8477 4.753516 TCATGTCAATCCAACGACCTAT 57.246 40.909 0.00 0.00 0.00 2.57
5320 8478 4.753516 ATCATGTCAATCCAACGACCTA 57.246 40.909 0.00 0.00 0.00 3.08
5321 8479 3.634397 ATCATGTCAATCCAACGACCT 57.366 42.857 0.00 0.00 0.00 3.85
5322 8480 4.155826 TCAAATCATGTCAATCCAACGACC 59.844 41.667 0.00 0.00 0.00 4.79
5323 8481 5.295431 TCAAATCATGTCAATCCAACGAC 57.705 39.130 0.00 0.00 0.00 4.34
5324 8482 5.163632 CCATCAAATCATGTCAATCCAACGA 60.164 40.000 0.00 0.00 0.00 3.85
5325 8483 5.038683 CCATCAAATCATGTCAATCCAACG 58.961 41.667 0.00 0.00 0.00 4.10
5326 8484 4.807304 GCCATCAAATCATGTCAATCCAAC 59.193 41.667 0.00 0.00 0.00 3.77
5327 8485 4.141892 GGCCATCAAATCATGTCAATCCAA 60.142 41.667 0.00 0.00 0.00 3.53
5328 8486 3.385433 GGCCATCAAATCATGTCAATCCA 59.615 43.478 0.00 0.00 0.00 3.41
5329 8487 3.551454 CGGCCATCAAATCATGTCAATCC 60.551 47.826 2.24 0.00 0.00 3.01
5330 8488 3.316029 TCGGCCATCAAATCATGTCAATC 59.684 43.478 2.24 0.00 0.00 2.67
5331 8489 3.289836 TCGGCCATCAAATCATGTCAAT 58.710 40.909 2.24 0.00 0.00 2.57
5332 8490 2.684374 CTCGGCCATCAAATCATGTCAA 59.316 45.455 2.24 0.00 0.00 3.18
5333 8491 2.093021 TCTCGGCCATCAAATCATGTCA 60.093 45.455 2.24 0.00 0.00 3.58
5334 8492 2.564771 TCTCGGCCATCAAATCATGTC 58.435 47.619 2.24 0.00 0.00 3.06
5335 8493 2.715749 TCTCGGCCATCAAATCATGT 57.284 45.000 2.24 0.00 0.00 3.21
5336 8494 5.694231 TTAATCTCGGCCATCAAATCATG 57.306 39.130 2.24 0.00 0.00 3.07
5337 8495 6.294899 CCAATTAATCTCGGCCATCAAATCAT 60.295 38.462 2.24 0.00 0.00 2.45
5338 8496 5.009911 CCAATTAATCTCGGCCATCAAATCA 59.990 40.000 2.24 0.00 0.00 2.57
5339 8497 5.241506 TCCAATTAATCTCGGCCATCAAATC 59.758 40.000 2.24 0.00 0.00 2.17
5340 8498 5.139727 TCCAATTAATCTCGGCCATCAAAT 58.860 37.500 2.24 0.00 0.00 2.32
5341 8499 4.531854 TCCAATTAATCTCGGCCATCAAA 58.468 39.130 2.24 0.00 0.00 2.69
5342 8500 4.163441 TCCAATTAATCTCGGCCATCAA 57.837 40.909 2.24 0.00 0.00 2.57
5343 8501 3.855255 TCCAATTAATCTCGGCCATCA 57.145 42.857 2.24 0.00 0.00 3.07
5344 8502 4.394300 CAGATCCAATTAATCTCGGCCATC 59.606 45.833 2.24 0.00 31.05 3.51
5345 8503 4.330250 CAGATCCAATTAATCTCGGCCAT 58.670 43.478 2.24 0.00 31.05 4.40
5346 8504 3.743521 CAGATCCAATTAATCTCGGCCA 58.256 45.455 2.24 0.00 31.05 5.36
5347 8505 2.485814 GCAGATCCAATTAATCTCGGCC 59.514 50.000 0.00 0.00 31.05 6.13
5348 8506 2.485814 GGCAGATCCAATTAATCTCGGC 59.514 50.000 0.62 2.99 31.05 5.54
5349 8507 3.077359 GGGCAGATCCAATTAATCTCGG 58.923 50.000 0.62 0.00 36.21 4.63
5350 8508 3.077359 GGGGCAGATCCAATTAATCTCG 58.923 50.000 0.62 0.00 36.21 4.04
5351 8509 4.379302 AGGGGCAGATCCAATTAATCTC 57.621 45.455 0.62 0.00 36.21 2.75
5352 8510 4.821532 AAGGGGCAGATCCAATTAATCT 57.178 40.909 0.00 0.00 36.21 2.40
5353 8511 4.039609 CCAAAGGGGCAGATCCAATTAATC 59.960 45.833 0.00 0.00 36.21 1.75
5354 8512 3.969312 CCAAAGGGGCAGATCCAATTAAT 59.031 43.478 0.00 0.00 36.21 1.40
5355 8513 3.373830 CCAAAGGGGCAGATCCAATTAA 58.626 45.455 0.00 0.00 36.21 1.40
5356 8514 3.030873 CCAAAGGGGCAGATCCAATTA 57.969 47.619 0.00 0.00 36.21 1.40
5357 8515 1.870064 CCAAAGGGGCAGATCCAATT 58.130 50.000 0.00 0.00 36.21 2.32
5358 8516 3.621419 CCAAAGGGGCAGATCCAAT 57.379 52.632 0.00 0.00 36.21 3.16
5855 10251 0.236711 CCTTGCGCTTCTCACACAAG 59.763 55.000 9.73 0.00 37.94 3.16
5901 10298 6.543831 ACTTGATTAGCACAGTGAGAAAAACT 59.456 34.615 4.15 0.00 0.00 2.66
5902 10299 6.729187 ACTTGATTAGCACAGTGAGAAAAAC 58.271 36.000 4.15 0.00 0.00 2.43
5903 10300 6.942532 ACTTGATTAGCACAGTGAGAAAAA 57.057 33.333 4.15 0.00 0.00 1.94
5904 10301 6.542005 TGAACTTGATTAGCACAGTGAGAAAA 59.458 34.615 4.15 0.00 0.00 2.29
5905 10302 6.054941 TGAACTTGATTAGCACAGTGAGAAA 58.945 36.000 4.15 0.00 0.00 2.52
5906 10303 5.610398 TGAACTTGATTAGCACAGTGAGAA 58.390 37.500 4.15 0.00 0.00 2.87
6058 10467 5.613358 AGCTGTAGTGCTTGAACAATTAC 57.387 39.130 0.00 0.00 40.93 1.89
6089 10499 4.023980 ACACATCCTTACGGAAGATCTGA 58.976 43.478 9.60 0.00 44.02 3.27
6255 10669 2.890109 GCAATCATCAGCCGCTCCG 61.890 63.158 0.00 0.00 0.00 4.63
6260 10674 1.065102 CTCCTTTGCAATCATCAGCCG 59.935 52.381 0.00 0.00 0.00 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.