Multiple sequence alignment - TraesCS2D01G516000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G516000 chr2D 100.000 6879 0 0 1 6879 607424378 607417500 0.000000e+00 12704.0
1 TraesCS2D01G516000 chr2D 98.858 788 9 0 3622 4409 579753524 579754311 0.000000e+00 1406.0
2 TraesCS2D01G516000 chr2D 87.500 144 15 2 6258 6400 607309332 607309191 5.520000e-36 163.0
3 TraesCS2D01G516000 chr2D 80.189 212 34 8 6649 6855 35203279 35203071 1.190000e-32 152.0
4 TraesCS2D01G516000 chr2A 91.655 2780 126 35 1 2729 738991004 738988280 0.000000e+00 3751.0
5 TraesCS2D01G516000 chr2A 90.200 1102 60 20 5379 6449 738986167 738985083 0.000000e+00 1393.0
6 TraesCS2D01G516000 chr2A 93.880 866 44 7 4409 5267 738987388 738986525 0.000000e+00 1297.0
7 TraesCS2D01G516000 chr2A 92.601 892 34 13 2730 3621 738988240 738987381 0.000000e+00 1253.0
8 TraesCS2D01G516000 chr2A 80.702 228 32 10 6649 6872 611335617 611335398 4.270000e-37 167.0
9 TraesCS2D01G516000 chr2B 89.974 2344 197 20 743 3072 738680980 738683299 0.000000e+00 2992.0
10 TraesCS2D01G516000 chr2B 80.821 975 101 48 5268 6200 738686423 738687353 0.000000e+00 686.0
11 TraesCS2D01G516000 chr2B 88.528 523 41 12 4409 4916 738684375 738684893 3.530000e-172 616.0
12 TraesCS2D01G516000 chr2B 79.933 598 57 33 52 615 738680303 738680871 1.400000e-101 381.0
13 TraesCS2D01G516000 chr2B 81.622 185 27 6 6687 6868 52938834 52938654 5.560000e-31 147.0
14 TraesCS2D01G516000 chr5D 98.983 787 8 0 3622 4408 370719302 370720088 0.000000e+00 1410.0
15 TraesCS2D01G516000 chr5D 82.488 217 26 10 6656 6866 78807533 78807743 5.480000e-41 180.0
16 TraesCS2D01G516000 chr5D 80.702 228 38 5 6650 6872 320396841 320397067 9.170000e-39 172.0
17 TraesCS2D01G516000 chr5D 83.152 184 21 8 6695 6872 481803144 481802965 7.140000e-35 159.0
18 TraesCS2D01G516000 chr5D 83.240 179 22 5 6694 6865 371057910 371058087 2.570000e-34 158.0
19 TraesCS2D01G516000 chr5D 84.211 95 11 3 6649 6740 371077877 371077970 9.500000e-14 89.8
20 TraesCS2D01G516000 chr1D 98.477 788 12 0 3622 4409 368059127 368059914 0.000000e+00 1389.0
21 TraesCS2D01G516000 chrUn 86.192 478 24 19 3659 4136 288797551 288797986 4.830000e-131 479.0
22 TraesCS2D01G516000 chrUn 93.213 221 7 4 4141 4361 288798055 288798267 1.110000e-82 318.0
23 TraesCS2D01G516000 chrUn 85.870 92 12 1 6449 6539 300168639 300168548 5.680000e-16 97.1
24 TraesCS2D01G516000 chr7A 86.192 478 24 19 3659 4136 33086548 33086113 4.830000e-131 479.0
25 TraesCS2D01G516000 chr7A 93.213 221 7 4 4141 4361 33086044 33085832 1.110000e-82 318.0
26 TraesCS2D01G516000 chr7A 80.000 160 20 7 3985 4136 620199547 620199392 2.620000e-19 108.0
27 TraesCS2D01G516000 chr7A 87.692 65 7 1 6450 6514 81552420 81552483 2.660000e-09 75.0
28 TraesCS2D01G516000 chr1A 90.837 251 18 2 4159 4408 249340346 249340592 1.430000e-86 331.0
29 TraesCS2D01G516000 chr6D 89.571 163 16 1 4247 4408 18710929 18710767 9.040000e-49 206.0
30 TraesCS2D01G516000 chr4A 86.170 188 18 5 4221 4406 719978379 719978560 5.440000e-46 196.0
31 TraesCS2D01G516000 chr4A 80.142 141 19 3 3883 4015 719978017 719978156 5.680000e-16 97.1
32 TraesCS2D01G516000 chr6B 85.185 189 23 2 4221 4408 32649710 32649526 9.110000e-44 189.0
33 TraesCS2D01G516000 chr1B 81.517 211 29 7 6649 6856 531104824 531104621 1.530000e-36 165.0
34 TraesCS2D01G516000 chr3D 89.683 126 8 1 3726 3851 513626464 513626584 9.240000e-34 156.0
35 TraesCS2D01G516000 chr6A 81.383 188 30 5 6694 6879 28639143 28638959 1.550000e-31 148.0
36 TraesCS2D01G516000 chr5B 80.864 162 27 3 6713 6872 13503308 13503149 2.610000e-24 124.0
37 TraesCS2D01G516000 chr3A 91.209 91 5 1 4039 4129 686795311 686795398 3.370000e-23 121.0
38 TraesCS2D01G516000 chr5A 88.119 101 7 5 6649 6745 473648581 473648680 1.570000e-21 115.0
39 TraesCS2D01G516000 chr7D 92.308 65 5 0 6450 6514 78117924 78117988 7.350000e-15 93.5
40 TraesCS2D01G516000 chr7B 84.416 77 11 1 6463 6539 666014522 666014597 2.660000e-09 75.0
41 TraesCS2D01G516000 chr4D 100.000 30 0 0 3620 3649 472214483 472214512 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G516000 chr2D 607417500 607424378 6878 True 12704.00 12704 100.0000 1 6879 1 chr2D.!!$R3 6878
1 TraesCS2D01G516000 chr2D 579753524 579754311 787 False 1406.00 1406 98.8580 3622 4409 1 chr2D.!!$F1 787
2 TraesCS2D01G516000 chr2A 738985083 738991004 5921 True 1923.50 3751 92.0840 1 6449 4 chr2A.!!$R2 6448
3 TraesCS2D01G516000 chr2B 738680303 738687353 7050 False 1168.75 2992 84.8140 52 6200 4 chr2B.!!$F1 6148
4 TraesCS2D01G516000 chr5D 370719302 370720088 786 False 1410.00 1410 98.9830 3622 4408 1 chr5D.!!$F3 786
5 TraesCS2D01G516000 chr1D 368059127 368059914 787 False 1389.00 1389 98.4770 3622 4409 1 chr1D.!!$F1 787
6 TraesCS2D01G516000 chrUn 288797551 288798267 716 False 398.50 479 89.7025 3659 4361 2 chrUn.!!$F1 702
7 TraesCS2D01G516000 chr7A 33085832 33086548 716 True 398.50 479 89.7025 3659 4361 2 chr7A.!!$R2 702

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
288 290 0.037605 GTCCGTCCGTCCATCTGTTT 60.038 55.000 0.00 0.0 0.00 2.83 F
1251 1313 0.036875 GTTTCTGGGGGTCAGGTGAG 59.963 60.000 0.00 0.0 43.53 3.51 F
1467 1532 0.391395 CCTCTCAAGGCTCACAGCAG 60.391 60.000 0.00 0.0 44.75 4.24 F
2460 2528 0.172803 AGAACCTACATCGACGGCAC 59.827 55.000 0.00 0.0 0.00 5.01 F
3831 4509 1.078848 ACTTCGGAGCTCATGGCAC 60.079 57.895 17.19 0.0 44.79 5.01 F
5035 6924 1.509703 CTGCTCACATCCATCCATCG 58.490 55.000 0.00 0.0 0.00 3.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1560 1625 0.036306 TCAAAGAAGGGAACGGCTCC 59.964 55.000 0.00 0.00 44.54 4.70 R
2240 2305 2.158885 GGAGCTACAAGATTCCTCCCAC 60.159 54.545 0.00 0.00 36.85 4.61 R
3248 3915 2.159338 CCAGATCCAAAATCCAGCAACG 60.159 50.000 0.00 0.00 0.00 4.10 R
4280 5022 2.906568 AGGGGCAAAATTGGAAGACAT 58.093 42.857 0.00 0.00 0.00 3.06 R
5317 7508 3.075148 CCTAGGCATGATGCTGAATGAG 58.925 50.000 17.84 5.74 44.28 2.90 R
6521 8774 0.028902 AACAACGCCTCTTTGTTCGC 59.971 50.000 0.00 0.00 42.26 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.697756 CTGTTCTCCGCCGGCCAA 62.698 66.667 23.46 8.22 0.00 4.52
30 31 3.976701 CTGTTCTCCGCCGGCCAAT 62.977 63.158 23.46 0.00 0.00 3.16
31 32 3.202706 GTTCTCCGCCGGCCAATC 61.203 66.667 23.46 2.87 0.00 2.67
32 33 3.711814 TTCTCCGCCGGCCAATCA 61.712 61.111 23.46 0.00 0.00 2.57
33 34 3.261039 TTCTCCGCCGGCCAATCAA 62.261 57.895 23.46 4.48 0.00 2.57
40 41 1.329913 GCCGGCCAATCAAATCCCTT 61.330 55.000 18.11 0.00 0.00 3.95
69 70 2.349580 TGCTCGCTCATCTTTCGATTTG 59.650 45.455 0.00 0.00 0.00 2.32
143 144 4.927422 TCCTTTACTTTTCGCTGGTTTTG 58.073 39.130 0.00 0.00 0.00 2.44
282 284 3.446570 GTCCGTCCGTCCGTCCAT 61.447 66.667 0.00 0.00 0.00 3.41
283 285 3.136123 TCCGTCCGTCCGTCCATC 61.136 66.667 0.00 0.00 0.00 3.51
284 286 3.138798 CCGTCCGTCCGTCCATCT 61.139 66.667 0.00 0.00 0.00 2.90
285 287 2.102357 CGTCCGTCCGTCCATCTG 59.898 66.667 0.00 0.00 0.00 2.90
286 288 2.697761 CGTCCGTCCGTCCATCTGT 61.698 63.158 0.00 0.00 0.00 3.41
287 289 1.590147 GTCCGTCCGTCCATCTGTT 59.410 57.895 0.00 0.00 0.00 3.16
288 290 0.037605 GTCCGTCCGTCCATCTGTTT 60.038 55.000 0.00 0.00 0.00 2.83
289 291 0.682852 TCCGTCCGTCCATCTGTTTT 59.317 50.000 0.00 0.00 0.00 2.43
290 292 1.076332 CCGTCCGTCCATCTGTTTTC 58.924 55.000 0.00 0.00 0.00 2.29
291 293 1.337823 CCGTCCGTCCATCTGTTTTCT 60.338 52.381 0.00 0.00 0.00 2.52
292 294 1.726791 CGTCCGTCCATCTGTTTTCTG 59.273 52.381 0.00 0.00 0.00 3.02
293 295 2.767505 GTCCGTCCATCTGTTTTCTGT 58.232 47.619 0.00 0.00 0.00 3.41
294 296 3.139077 GTCCGTCCATCTGTTTTCTGTT 58.861 45.455 0.00 0.00 0.00 3.16
295 297 3.186613 GTCCGTCCATCTGTTTTCTGTTC 59.813 47.826 0.00 0.00 0.00 3.18
296 298 3.138304 CCGTCCATCTGTTTTCTGTTCA 58.862 45.455 0.00 0.00 0.00 3.18
297 299 3.187227 CCGTCCATCTGTTTTCTGTTCAG 59.813 47.826 0.00 0.00 0.00 3.02
298 300 3.187227 CGTCCATCTGTTTTCTGTTCAGG 59.813 47.826 0.00 0.00 0.00 3.86
299 301 3.057946 GTCCATCTGTTTTCTGTTCAGGC 60.058 47.826 0.00 0.00 0.00 4.85
300 302 2.229784 CCATCTGTTTTCTGTTCAGGCC 59.770 50.000 0.00 0.00 0.00 5.19
338 340 0.109919 GGTGGAATCGCCGTGTTTTC 60.110 55.000 0.00 0.00 40.66 2.29
354 356 7.435305 CCGTGTTTTCCTCCCTTTATTTTTAA 58.565 34.615 0.00 0.00 0.00 1.52
355 357 7.927092 CCGTGTTTTCCTCCCTTTATTTTTAAA 59.073 33.333 0.00 0.00 0.00 1.52
398 407 1.345089 TGCATGCATCACCTTTGCTTT 59.655 42.857 18.46 0.00 40.77 3.51
410 419 1.178534 TTTGCTTTCTTCCAGCCCGG 61.179 55.000 0.00 0.00 36.33 5.73
420 429 0.257328 TCCAGCCCGGAAATAATGCA 59.743 50.000 0.73 0.00 42.52 3.96
422 431 1.392589 CAGCCCGGAAATAATGCAGT 58.607 50.000 0.73 0.00 0.00 4.40
423 432 1.066002 CAGCCCGGAAATAATGCAGTG 59.934 52.381 0.73 0.00 0.00 3.66
424 433 0.385390 GCCCGGAAATAATGCAGTGG 59.615 55.000 0.73 0.00 0.00 4.00
425 434 0.385390 CCCGGAAATAATGCAGTGGC 59.615 55.000 0.73 0.00 41.68 5.01
426 435 1.392589 CCGGAAATAATGCAGTGGCT 58.607 50.000 0.00 0.00 41.91 4.75
427 436 1.066002 CCGGAAATAATGCAGTGGCTG 59.934 52.381 0.00 0.00 41.91 4.85
428 437 1.066002 CGGAAATAATGCAGTGGCTGG 59.934 52.381 0.00 0.00 41.91 4.85
480 500 1.228675 AGAGCAGGGGCAAACTTGG 60.229 57.895 0.00 0.00 44.61 3.61
505 525 3.827876 TCGAGTTTGGTGTACTGTATCCA 59.172 43.478 9.53 9.53 0.00 3.41
507 527 3.921677 AGTTTGGTGTACTGTATCCACG 58.078 45.455 12.09 0.00 0.00 4.94
541 575 1.377725 ACGCCAAGATTGCTGAGGG 60.378 57.895 0.00 0.00 0.00 4.30
616 656 7.227910 GGCCGTATTTACTTCCAGATATCAAAA 59.772 37.037 5.32 0.00 0.00 2.44
633 676 1.712056 AAAGGGCAAAAGGGTACACC 58.288 50.000 0.00 0.00 40.67 4.16
649 692 0.321653 CACCAGAGACGGAAAAGGGG 60.322 60.000 0.00 0.00 0.00 4.79
679 734 6.466308 TTTTCTGAATGTGTGTATCTGTCG 57.534 37.500 0.00 0.00 0.00 4.35
691 746 3.449377 TGTATCTGTCGTAGATTTGGCCA 59.551 43.478 0.00 0.00 43.68 5.36
717 772 1.156736 GGACTGGATTCGTGGTGTTG 58.843 55.000 0.00 0.00 0.00 3.33
724 779 2.496111 GATTCGTGGTGTTGTGGGTAA 58.504 47.619 0.00 0.00 0.00 2.85
725 780 1.666054 TTCGTGGTGTTGTGGGTAAC 58.334 50.000 0.00 0.00 0.00 2.50
790 845 5.543507 TGATGTTGTGGCAAACCTTAATT 57.456 34.783 0.00 0.00 36.63 1.40
793 848 4.688021 TGTTGTGGCAAACCTTAATTGAC 58.312 39.130 0.00 0.00 36.31 3.18
814 869 0.754217 AGCAGCATTCCGCATTCCAT 60.754 50.000 0.00 0.00 46.13 3.41
840 897 2.752354 TGAGTCTGCTACTTGCTCTCTC 59.248 50.000 0.00 0.00 39.07 3.20
845 902 4.388469 GTCTGCTACTTGCTCTCTCTTTTG 59.612 45.833 0.00 0.00 43.37 2.44
847 904 4.708177 TGCTACTTGCTCTCTCTTTTGTT 58.292 39.130 0.00 0.00 43.37 2.83
849 906 4.752101 GCTACTTGCTCTCTCTTTTGTTCA 59.248 41.667 0.00 0.00 38.95 3.18
852 909 4.759183 ACTTGCTCTCTCTTTTGTTCATCC 59.241 41.667 0.00 0.00 0.00 3.51
854 915 4.717877 TGCTCTCTCTTTTGTTCATCCAA 58.282 39.130 0.00 0.00 0.00 3.53
876 937 7.886970 TCCAAGAATGTTCAGATTTCAGAAGAT 59.113 33.333 0.00 0.00 29.02 2.40
937 999 2.636647 TGCAGGTCACACTTGAATCA 57.363 45.000 0.00 0.00 31.90 2.57
949 1011 4.141390 ACACTTGAATCACTGGGAAAGAGT 60.141 41.667 0.00 0.00 0.00 3.24
1050 1112 0.721718 GGAATTCCGTCGAACAGCTG 59.278 55.000 13.48 13.48 0.00 4.24
1161 1223 2.035442 GTCGCAGAACCTCCAAGGC 61.035 63.158 0.00 0.00 39.63 4.35
1179 1241 1.432251 CTACGAGATGAACCGCGGT 59.568 57.895 28.70 28.70 0.00 5.68
1230 1292 2.159282 GCATCAAGATGGCCAGTTCTTG 60.159 50.000 30.95 30.95 46.57 3.02
1251 1313 0.036875 GTTTCTGGGGGTCAGGTGAG 59.963 60.000 0.00 0.00 43.53 3.51
1275 1337 2.806856 CTCGAGTGGCAATGCGCTC 61.807 63.158 9.73 15.18 41.91 5.03
1389 1451 5.361857 CAGCCTTTCTTTGGATAATGTGGAT 59.638 40.000 0.00 0.00 0.00 3.41
1467 1532 0.391395 CCTCTCAAGGCTCACAGCAG 60.391 60.000 0.00 0.00 44.75 4.24
1539 1604 7.530426 AAGATTGCATCCTTACAGAACTTTT 57.470 32.000 0.00 0.00 0.00 2.27
1560 1625 1.154093 TTTAGACGACGAGCAGCCG 60.154 57.895 0.00 2.15 0.00 5.52
1627 1692 2.503061 CCCTGATGCCAGAGGACG 59.497 66.667 0.00 0.00 43.02 4.79
1665 1730 3.588817 TAGTTCCCTGGACGGCCGA 62.589 63.158 35.90 8.90 36.79 5.54
1692 1757 2.030805 AGCGTGCAAGAGGAAAAACATC 60.031 45.455 2.99 0.00 0.00 3.06
1710 1775 1.153289 CGAAGGAGTCCATGGGCAG 60.153 63.158 20.74 0.00 0.00 4.85
1776 1841 2.026262 TGCCTTCCATAGTGTTCCTTCC 60.026 50.000 0.00 0.00 0.00 3.46
1791 1856 3.674997 TCCTTCCTCAAGTTTCAATCCG 58.325 45.455 0.00 0.00 0.00 4.18
1810 1875 3.010413 GCTCCTGGCCCAAATGTGC 62.010 63.158 0.00 0.00 34.27 4.57
1830 1895 3.745975 TGCCGTCTCATAACTTCTTGTTG 59.254 43.478 0.00 0.00 39.55 3.33
1845 1910 1.909700 TGTTGGCTCCAAGTTCCATC 58.090 50.000 0.83 0.00 36.52 3.51
1925 1990 2.047061 TCCTAGCGGAGGCAATAACAT 58.953 47.619 2.94 0.00 46.25 2.71
2226 2291 5.634859 CAGTTTGGACAACATAATTCTTGGC 59.365 40.000 0.00 0.00 0.00 4.52
2240 2305 4.543590 TTCTTGGCAGAGAGGAAGTTAG 57.456 45.455 0.00 0.00 0.00 2.34
2277 2342 2.591715 CCCGGCTTCCCTAATGCG 60.592 66.667 0.00 0.00 0.00 4.73
2319 2387 2.885135 TGAGACATTTGGTGCCAGAT 57.115 45.000 0.00 0.00 0.00 2.90
2460 2528 0.172803 AGAACCTACATCGACGGCAC 59.827 55.000 0.00 0.00 0.00 5.01
2723 2791 5.749462 AGAAGATTAATGGAGGTGAGTTGG 58.251 41.667 0.00 0.00 0.00 3.77
2818 2925 3.706698 TGAAAACTGATCGCTCTATCCG 58.293 45.455 0.00 0.00 0.00 4.18
3037 3150 7.482169 TGTCAGATTTGAGGTCAGTAATAGT 57.518 36.000 0.00 0.00 32.98 2.12
3042 3155 9.522804 CAGATTTGAGGTCAGTAATAGTACTTC 57.477 37.037 0.00 0.00 38.58 3.01
3051 3164 8.281893 GGTCAGTAATAGTACTTCTCGTATGAC 58.718 40.741 0.00 7.60 38.58 3.06
3136 3803 8.556213 AGTAGTAGATCGATATTTGAGTCTCC 57.444 38.462 0.00 0.00 0.00 3.71
3185 3852 1.117150 ACTTGCATTGCCCCATCATC 58.883 50.000 6.12 0.00 0.00 2.92
3221 3888 5.583061 TGTAACACACTAGTTGTTTGACAGG 59.417 40.000 20.78 0.00 35.67 4.00
3255 3922 6.837992 AGTATACATGGTTTTTACGTTGCTG 58.162 36.000 5.50 0.00 0.00 4.41
3270 3937 2.148446 TGCTGGATTTTGGATCTGGG 57.852 50.000 0.00 0.00 0.00 4.45
3280 3947 4.666412 TTTGGATCTGGGACCATGTAAA 57.334 40.909 0.00 0.00 36.02 2.01
3338 4005 8.296713 TGTACTTAAAGCAGGATAAAAGCAAAG 58.703 33.333 0.00 0.00 0.00 2.77
3378 4045 1.504275 AAATGGGAGGCCAGTCAGCT 61.504 55.000 5.01 0.00 0.00 4.24
3472 4149 9.875691 AATAAAGAATAGTCAGCATATCGCATA 57.124 29.630 0.00 0.00 46.13 3.14
3528 4205 7.745620 ATTGATAAGTTTCCGAGTGTCTTTT 57.254 32.000 0.00 0.00 0.00 2.27
3529 4206 6.539649 TGATAAGTTTCCGAGTGTCTTTTG 57.460 37.500 0.00 0.00 0.00 2.44
3608 4286 8.422577 AAAAGTCTAGTATTTGATGCCCTTTT 57.577 30.769 0.00 0.00 0.00 2.27
3757 4435 1.807886 CCTAAGACCACCCTCGTCG 59.192 63.158 0.00 0.00 35.33 5.12
3831 4509 1.078848 ACTTCGGAGCTCATGGCAC 60.079 57.895 17.19 0.00 44.79 5.01
4646 5389 7.800092 ACTCATCTTTCAGGAACTATTAGCAT 58.200 34.615 0.00 0.00 36.02 3.79
4751 5494 6.426328 GTCATGGAGATTATCATCTGTGGAAC 59.574 42.308 0.00 0.00 40.14 3.62
4762 5505 2.570365 TGTGGAACATGAGCCATGC 58.430 52.632 13.00 4.17 45.67 4.06
4809 5556 4.362279 TGCACTCATGTTTCAAAGCTTTC 58.638 39.130 9.23 0.00 0.00 2.62
4827 5574 9.485206 AAAGCTTTCGTACTCTCTTTATGTTTA 57.515 29.630 5.69 0.00 0.00 2.01
4945 5701 4.929808 ACTTAGTTTGATGCGTTGTCCTAG 59.070 41.667 0.00 0.00 0.00 3.02
5021 5778 1.674962 CCTTAGGCTTGATTGCTGCTC 59.325 52.381 0.00 0.00 0.00 4.26
5035 6924 1.509703 CTGCTCACATCCATCCATCG 58.490 55.000 0.00 0.00 0.00 3.84
5056 6946 9.627395 CCATCGACTTAGTATCCAAACTAATAG 57.373 37.037 0.00 0.00 40.30 1.73
5124 7015 7.011669 CACAAACTTTTGGCTGATTTTCAGAAT 59.988 33.333 8.65 0.00 43.33 2.40
5126 7017 8.066000 CAAACTTTTGGCTGATTTTCAGAATTC 58.934 33.333 8.65 0.00 45.88 2.17
5174 7067 6.053632 TCATGAGCTTACATATGGGTATGG 57.946 41.667 7.80 0.00 41.64 2.74
5194 7088 4.815269 TGGATTTTGGTTTTGCCTAATCG 58.185 39.130 0.00 0.00 38.60 3.34
5203 7097 7.817593 TGGTTTTGCCTAATCGTGGATACGT 62.818 44.000 0.00 0.00 43.64 3.57
5268 7162 9.625747 TGCATAATCATTGATTTGGAAGTACTA 57.374 29.630 16.62 0.00 33.95 1.82
5317 7508 5.187967 TGTCAGACTTCCTAAGAATCCCTTC 59.812 44.000 1.31 0.00 36.34 3.46
5341 7532 1.738474 TCAGCATCATGCCTAGGGAT 58.262 50.000 10.51 10.51 46.52 3.85
5343 7534 2.160205 CAGCATCATGCCTAGGGATTG 58.840 52.381 14.03 11.65 46.52 2.67
5347 7538 4.141181 AGCATCATGCCTAGGGATTGTTTA 60.141 41.667 14.03 0.00 46.52 2.01
5349 7540 4.437682 TCATGCCTAGGGATTGTTTAGG 57.562 45.455 14.03 0.37 37.58 2.69
5357 7548 4.635699 AGGGATTGTTTAGGAGAACGTT 57.364 40.909 0.00 0.00 32.18 3.99
5358 7549 4.981812 AGGGATTGTTTAGGAGAACGTTT 58.018 39.130 0.46 0.00 32.18 3.60
5359 7550 5.001874 AGGGATTGTTTAGGAGAACGTTTC 58.998 41.667 0.46 2.05 32.18 2.78
5360 7551 4.758165 GGGATTGTTTAGGAGAACGTTTCA 59.242 41.667 0.46 0.00 32.18 2.69
5367 7558 6.422701 TGTTTAGGAGAACGTTTCAGTACATG 59.577 38.462 0.46 0.00 32.18 3.21
5368 7559 4.602340 AGGAGAACGTTTCAGTACATGT 57.398 40.909 0.46 2.69 0.00 3.21
5369 7560 4.307432 AGGAGAACGTTTCAGTACATGTG 58.693 43.478 9.11 0.00 0.00 3.21
5370 7561 4.056050 GGAGAACGTTTCAGTACATGTGT 58.944 43.478 9.11 0.00 0.00 3.72
5371 7562 4.510340 GGAGAACGTTTCAGTACATGTGTT 59.490 41.667 9.11 0.71 0.00 3.32
5372 7563 5.403897 AGAACGTTTCAGTACATGTGTTG 57.596 39.130 9.11 6.84 0.00 3.33
5373 7564 4.873827 AGAACGTTTCAGTACATGTGTTGT 59.126 37.500 9.11 0.00 42.62 3.32
5384 7575 5.643777 AGTACATGTGTTGTTAGGATCTTGC 59.356 40.000 9.11 0.00 39.87 4.01
5799 8015 6.089249 AGATTCAAAACTGGTCATGGTTTC 57.911 37.500 0.00 0.00 35.02 2.78
5805 8021 4.993029 AACTGGTCATGGTTTCGAAAAA 57.007 36.364 13.10 4.50 0.00 1.94
5806 8022 4.301637 ACTGGTCATGGTTTCGAAAAAC 57.698 40.909 13.10 9.41 43.36 2.43
5813 8030 6.311690 GGTCATGGTTTCGAAAAACAAAGAAA 59.688 34.615 13.10 0.00 45.44 2.52
5956 8176 5.590259 AGTTTAAAGTGACATGTTGCTGTCT 59.410 36.000 0.00 0.00 44.73 3.41
5958 8178 1.788258 AGTGACATGTTGCTGTCTCG 58.212 50.000 0.00 0.00 44.73 4.04
5962 8182 0.588252 ACATGTTGCTGTCTCGTTGC 59.412 50.000 0.00 0.00 0.00 4.17
5965 8185 2.664851 TTGCTGTCTCGTTGCCGG 60.665 61.111 0.00 0.00 33.95 6.13
5976 8196 1.202557 TCGTTGCCGGTCTACTGTTTT 60.203 47.619 1.90 0.00 33.95 2.43
5977 8197 1.193874 CGTTGCCGGTCTACTGTTTTC 59.806 52.381 1.90 0.00 0.00 2.29
5985 8205 4.092968 CCGGTCTACTGTTTTCTGTTATGC 59.907 45.833 0.00 0.00 34.05 3.14
5998 8218 3.767131 TCTGTTATGCTGTGCTGGTAGTA 59.233 43.478 0.00 0.00 0.00 1.82
6007 8227 4.615912 GCTGTGCTGGTAGTATGGTTTTTG 60.616 45.833 0.00 0.00 0.00 2.44
6016 8236 6.948886 TGGTAGTATGGTTTTTGGCTGAATTA 59.051 34.615 0.00 0.00 0.00 1.40
6017 8237 7.451877 TGGTAGTATGGTTTTTGGCTGAATTAA 59.548 33.333 0.00 0.00 0.00 1.40
6050 8270 3.417069 TCTGGAAACGTCATGGTCATT 57.583 42.857 0.00 0.00 0.00 2.57
6166 8388 3.157949 TGTCACCTGTCGGCCACA 61.158 61.111 2.24 5.66 0.00 4.17
6214 8442 3.420968 CGCAATCGTTCGCCATTAG 57.579 52.632 0.00 0.00 0.00 1.73
6215 8443 0.650512 CGCAATCGTTCGCCATTAGT 59.349 50.000 0.00 0.00 0.00 2.24
6216 8444 1.592110 CGCAATCGTTCGCCATTAGTG 60.592 52.381 0.00 0.00 0.00 2.74
6306 8555 4.944372 GACGGCATCGGCTACGGG 62.944 72.222 0.00 0.00 42.13 5.28
6308 8557 4.524318 CGGCATCGGCTACGGGTT 62.524 66.667 0.00 0.00 41.39 4.11
6309 8558 2.588034 GGCATCGGCTACGGGTTC 60.588 66.667 0.00 0.00 41.39 3.62
6310 8559 2.499685 GCATCGGCTACGGGTTCT 59.500 61.111 0.00 0.00 41.39 3.01
6311 8560 1.591863 GCATCGGCTACGGGTTCTC 60.592 63.158 0.00 0.00 41.39 2.87
6312 8561 2.017559 GCATCGGCTACGGGTTCTCT 62.018 60.000 0.00 0.00 41.39 3.10
6313 8562 0.030908 CATCGGCTACGGGTTCTCTC 59.969 60.000 0.00 0.00 41.39 3.20
6328 8577 0.178932 CTCTCGGTATCCCCATCCCA 60.179 60.000 0.00 0.00 0.00 4.37
6336 8585 4.609018 CCCCATCCCAGCGCGTAG 62.609 72.222 8.43 0.00 0.00 3.51
6342 8591 4.849329 CCCAGCGCGTAGACGTCC 62.849 72.222 13.01 0.00 42.22 4.79
6350 8599 2.875485 GTAGACGTCCAGCTCGCA 59.125 61.111 13.01 0.00 0.00 5.10
6410 8659 1.381327 CGGCCTCAGGTTCCTCCTA 60.381 63.158 0.00 0.00 46.24 2.94
6411 8660 1.677637 CGGCCTCAGGTTCCTCCTAC 61.678 65.000 0.00 0.00 46.24 3.18
6415 8664 2.894765 GCCTCAGGTTCCTCCTACTATC 59.105 54.545 0.00 0.00 46.24 2.08
6416 8665 3.150767 CCTCAGGTTCCTCCTACTATCG 58.849 54.545 0.00 0.00 46.24 2.92
6449 8702 3.582647 TGTCAGGCCTGTTATCTGAAGAA 59.417 43.478 31.58 5.39 38.97 2.52
6450 8703 4.041567 TGTCAGGCCTGTTATCTGAAGAAA 59.958 41.667 31.58 5.17 38.97 2.52
6451 8704 5.003804 GTCAGGCCTGTTATCTGAAGAAAA 58.996 41.667 31.58 4.68 38.97 2.29
6452 8705 5.003804 TCAGGCCTGTTATCTGAAGAAAAC 58.996 41.667 31.58 0.00 34.97 2.43
6453 8706 4.156739 CAGGCCTGTTATCTGAAGAAAACC 59.843 45.833 25.53 0.00 0.00 3.27
6454 8707 4.079253 GGCCTGTTATCTGAAGAAAACCA 58.921 43.478 0.00 0.00 0.00 3.67
6455 8708 4.082733 GGCCTGTTATCTGAAGAAAACCAC 60.083 45.833 0.00 0.00 0.00 4.16
6456 8709 4.082733 GCCTGTTATCTGAAGAAAACCACC 60.083 45.833 0.00 0.00 0.00 4.61
6457 8710 5.070001 CCTGTTATCTGAAGAAAACCACCA 58.930 41.667 0.00 0.00 0.00 4.17
6458 8711 5.534654 CCTGTTATCTGAAGAAAACCACCAA 59.465 40.000 0.00 0.00 0.00 3.67
6459 8712 6.209391 CCTGTTATCTGAAGAAAACCACCAAT 59.791 38.462 0.00 0.00 0.00 3.16
6460 8713 7.255942 CCTGTTATCTGAAGAAAACCACCAATT 60.256 37.037 0.00 0.00 0.00 2.32
6461 8714 7.657336 TGTTATCTGAAGAAAACCACCAATTC 58.343 34.615 0.00 0.00 0.00 2.17
6462 8715 5.728637 ATCTGAAGAAAACCACCAATTCC 57.271 39.130 0.00 0.00 0.00 3.01
6463 8716 4.803452 TCTGAAGAAAACCACCAATTCCT 58.197 39.130 0.00 0.00 0.00 3.36
6464 8717 4.584325 TCTGAAGAAAACCACCAATTCCTG 59.416 41.667 0.00 0.00 0.00 3.86
6465 8718 4.541705 TGAAGAAAACCACCAATTCCTGA 58.458 39.130 0.00 0.00 0.00 3.86
6466 8719 4.959210 TGAAGAAAACCACCAATTCCTGAA 59.041 37.500 0.00 0.00 0.00 3.02
6467 8720 4.937201 AGAAAACCACCAATTCCTGAAC 57.063 40.909 0.00 0.00 0.00 3.18
6468 8721 3.317993 AGAAAACCACCAATTCCTGAACG 59.682 43.478 0.00 0.00 0.00 3.95
6469 8722 2.649531 AACCACCAATTCCTGAACGA 57.350 45.000 0.00 0.00 0.00 3.85
6470 8723 2.649531 ACCACCAATTCCTGAACGAA 57.350 45.000 0.00 0.00 0.00 3.85
6471 8724 2.504367 ACCACCAATTCCTGAACGAAG 58.496 47.619 0.00 0.00 0.00 3.79
6472 8725 1.812571 CCACCAATTCCTGAACGAAGG 59.187 52.381 0.00 0.00 38.84 3.46
6473 8726 1.812571 CACCAATTCCTGAACGAAGGG 59.187 52.381 0.00 0.00 37.96 3.95
6474 8727 0.811281 CCAATTCCTGAACGAAGGGC 59.189 55.000 0.00 0.00 37.96 5.19
6475 8728 1.533625 CAATTCCTGAACGAAGGGCA 58.466 50.000 0.00 0.00 37.96 5.36
6476 8729 2.094675 CAATTCCTGAACGAAGGGCAT 58.905 47.619 0.00 0.00 37.96 4.40
6477 8730 3.278574 CAATTCCTGAACGAAGGGCATA 58.721 45.455 0.00 0.00 37.96 3.14
6478 8731 2.396590 TTCCTGAACGAAGGGCATAC 57.603 50.000 0.00 0.00 37.96 2.39
6479 8732 0.539986 TCCTGAACGAAGGGCATACC 59.460 55.000 0.00 0.00 37.96 2.73
6480 8733 0.251916 CCTGAACGAAGGGCATACCA 59.748 55.000 0.00 0.00 43.89 3.25
6481 8734 1.134098 CCTGAACGAAGGGCATACCAT 60.134 52.381 0.00 0.00 43.89 3.55
6482 8735 2.213499 CTGAACGAAGGGCATACCATC 58.787 52.381 0.00 0.00 43.89 3.51
6489 8742 4.876701 GGCATACCATCGCCTGAA 57.123 55.556 0.00 0.00 45.29 3.02
6490 8743 3.329300 GGCATACCATCGCCTGAAT 57.671 52.632 0.00 0.00 45.29 2.57
6491 8744 1.160137 GGCATACCATCGCCTGAATC 58.840 55.000 0.00 0.00 45.29 2.52
6492 8745 0.792640 GCATACCATCGCCTGAATCG 59.207 55.000 0.00 0.00 0.00 3.34
6493 8746 1.432514 CATACCATCGCCTGAATCGG 58.567 55.000 0.00 0.00 0.00 4.18
6494 8747 0.320771 ATACCATCGCCTGAATCGGC 60.321 55.000 6.13 6.13 46.68 5.54
6501 8754 3.159298 GCCTGAATCGGCTTTCTGA 57.841 52.632 8.46 0.00 46.63 3.27
6502 8755 1.012841 GCCTGAATCGGCTTTCTGAG 58.987 55.000 8.46 0.00 46.63 3.35
6503 8756 1.677217 GCCTGAATCGGCTTTCTGAGT 60.677 52.381 8.46 0.00 46.63 3.41
6504 8757 2.275318 CCTGAATCGGCTTTCTGAGTC 58.725 52.381 5.80 0.00 41.65 3.36
6514 8767 5.396750 GGCTTTCTGAGTCGAATATGAAC 57.603 43.478 0.00 0.00 0.00 3.18
6515 8768 4.271291 GGCTTTCTGAGTCGAATATGAACC 59.729 45.833 0.00 0.00 0.00 3.62
6516 8769 4.271291 GCTTTCTGAGTCGAATATGAACCC 59.729 45.833 0.00 0.00 0.00 4.11
6517 8770 5.665459 CTTTCTGAGTCGAATATGAACCCT 58.335 41.667 0.00 0.00 0.00 4.34
6518 8771 4.655762 TCTGAGTCGAATATGAACCCTG 57.344 45.455 0.00 0.00 0.00 4.45
6519 8772 3.126831 CTGAGTCGAATATGAACCCTGC 58.873 50.000 0.00 0.00 0.00 4.85
6520 8773 2.158957 TGAGTCGAATATGAACCCTGCC 60.159 50.000 0.00 0.00 0.00 4.85
6521 8774 1.202533 AGTCGAATATGAACCCTGCCG 60.203 52.381 0.00 0.00 0.00 5.69
6522 8775 0.531974 TCGAATATGAACCCTGCCGC 60.532 55.000 0.00 0.00 0.00 6.53
6523 8776 1.831389 CGAATATGAACCCTGCCGCG 61.831 60.000 0.00 0.00 0.00 6.46
6524 8777 0.531974 GAATATGAACCCTGCCGCGA 60.532 55.000 8.23 0.00 0.00 5.87
6525 8778 0.107410 AATATGAACCCTGCCGCGAA 60.107 50.000 8.23 0.00 0.00 4.70
6526 8779 0.814010 ATATGAACCCTGCCGCGAAC 60.814 55.000 8.23 0.00 0.00 3.95
6527 8780 2.173758 TATGAACCCTGCCGCGAACA 62.174 55.000 8.23 4.31 0.00 3.18
6528 8781 2.975799 GAACCCTGCCGCGAACAA 60.976 61.111 8.23 0.00 0.00 2.83
6529 8782 2.517402 AACCCTGCCGCGAACAAA 60.517 55.556 8.23 0.00 0.00 2.83
6530 8783 2.458006 GAACCCTGCCGCGAACAAAG 62.458 60.000 8.23 2.06 0.00 2.77
6531 8784 2.668212 CCCTGCCGCGAACAAAGA 60.668 61.111 8.23 0.00 0.00 2.52
6532 8785 2.680913 CCCTGCCGCGAACAAAGAG 61.681 63.158 8.23 0.00 0.00 2.85
6533 8786 2.680913 CCTGCCGCGAACAAAGAGG 61.681 63.158 8.23 0.00 0.00 3.69
6535 8788 4.445545 GCCGCGAACAAAGAGGCG 62.446 66.667 8.23 0.00 44.04 5.52
6536 8789 3.041940 CCGCGAACAAAGAGGCGT 61.042 61.111 8.23 0.00 46.62 5.68
6537 8790 2.604174 CCGCGAACAAAGAGGCGTT 61.604 57.895 8.23 0.00 46.62 4.84
6538 8791 1.438710 CGCGAACAAAGAGGCGTTG 60.439 57.895 0.00 0.00 43.36 4.10
6539 8792 1.647084 GCGAACAAAGAGGCGTTGT 59.353 52.632 0.00 0.00 40.92 3.32
6541 8794 1.741993 CGAACAAAGAGGCGTTGTTG 58.258 50.000 17.64 6.69 46.50 3.33
6542 8795 1.063469 CGAACAAAGAGGCGTTGTTGT 59.937 47.619 17.64 7.23 46.50 3.32
6543 8796 2.285756 CGAACAAAGAGGCGTTGTTGTA 59.714 45.455 17.64 0.00 46.50 2.41
6544 8797 3.614588 GAACAAAGAGGCGTTGTTGTAC 58.385 45.455 17.64 4.60 46.50 2.90
6545 8798 2.914059 ACAAAGAGGCGTTGTTGTACT 58.086 42.857 6.81 0.00 35.70 2.73
6546 8799 3.275999 ACAAAGAGGCGTTGTTGTACTT 58.724 40.909 6.81 0.00 35.70 2.24
6547 8800 4.444536 ACAAAGAGGCGTTGTTGTACTTA 58.555 39.130 6.81 0.00 35.70 2.24
6548 8801 4.271776 ACAAAGAGGCGTTGTTGTACTTAC 59.728 41.667 6.81 0.00 35.70 2.34
6549 8802 4.332428 AAGAGGCGTTGTTGTACTTACT 57.668 40.909 0.00 0.00 0.00 2.24
6550 8803 4.332428 AGAGGCGTTGTTGTACTTACTT 57.668 40.909 0.00 0.00 0.00 2.24
6551 8804 4.304939 AGAGGCGTTGTTGTACTTACTTC 58.695 43.478 0.00 0.00 0.00 3.01
6552 8805 4.038883 AGAGGCGTTGTTGTACTTACTTCT 59.961 41.667 0.00 0.00 0.00 2.85
6553 8806 4.700700 AGGCGTTGTTGTACTTACTTCTT 58.299 39.130 0.00 0.00 0.00 2.52
6554 8807 5.121105 AGGCGTTGTTGTACTTACTTCTTT 58.879 37.500 0.00 0.00 0.00 2.52
6555 8808 5.587443 AGGCGTTGTTGTACTTACTTCTTTT 59.413 36.000 0.00 0.00 0.00 2.27
6556 8809 5.905733 GGCGTTGTTGTACTTACTTCTTTTC 59.094 40.000 0.00 0.00 0.00 2.29
6557 8810 5.614382 GCGTTGTTGTACTTACTTCTTTTCG 59.386 40.000 0.00 0.00 0.00 3.46
6558 8811 5.614382 CGTTGTTGTACTTACTTCTTTTCGC 59.386 40.000 0.00 0.00 0.00 4.70
6559 8812 6.509039 CGTTGTTGTACTTACTTCTTTTCGCT 60.509 38.462 0.00 0.00 0.00 4.93
6560 8813 6.913873 TGTTGTACTTACTTCTTTTCGCTT 57.086 33.333 0.00 0.00 0.00 4.68
6561 8814 6.711579 TGTTGTACTTACTTCTTTTCGCTTG 58.288 36.000 0.00 0.00 0.00 4.01
6562 8815 6.314400 TGTTGTACTTACTTCTTTTCGCTTGT 59.686 34.615 0.00 0.00 0.00 3.16
6563 8816 6.520792 TGTACTTACTTCTTTTCGCTTGTC 57.479 37.500 0.00 0.00 0.00 3.18
6564 8817 6.278363 TGTACTTACTTCTTTTCGCTTGTCT 58.722 36.000 0.00 0.00 0.00 3.41
6565 8818 7.428020 TGTACTTACTTCTTTTCGCTTGTCTA 58.572 34.615 0.00 0.00 0.00 2.59
6566 8819 7.922278 TGTACTTACTTCTTTTCGCTTGTCTAA 59.078 33.333 0.00 0.00 0.00 2.10
6567 8820 7.781548 ACTTACTTCTTTTCGCTTGTCTAAA 57.218 32.000 0.00 0.00 0.00 1.85
6568 8821 8.205131 ACTTACTTCTTTTCGCTTGTCTAAAA 57.795 30.769 0.00 0.00 0.00 1.52
6569 8822 8.671028 ACTTACTTCTTTTCGCTTGTCTAAAAA 58.329 29.630 0.00 0.00 0.00 1.94
6648 8901 9.521503 TGAATATTTTTGTGAAAATCGTGAACA 57.478 25.926 0.81 0.00 42.80 3.18
6653 8906 7.818493 TTTTGTGAAAATCGTGAACAAATCA 57.182 28.000 0.00 0.00 39.65 2.57
6654 8907 7.448588 TTTGTGAAAATCGTGAACAAATCAG 57.551 32.000 0.00 0.00 39.19 2.90
6655 8908 5.518812 TGTGAAAATCGTGAACAAATCAGG 58.481 37.500 0.00 0.00 43.67 3.86
6662 8915 5.766150 TCGTGAACAAATCAGGAACATTT 57.234 34.783 0.00 0.00 46.80 2.32
6663 8916 6.142818 TCGTGAACAAATCAGGAACATTTT 57.857 33.333 0.00 0.00 46.80 1.82
6664 8917 6.568869 TCGTGAACAAATCAGGAACATTTTT 58.431 32.000 0.00 0.00 46.80 1.94
6665 8918 6.695278 TCGTGAACAAATCAGGAACATTTTTC 59.305 34.615 0.00 0.00 46.80 2.29
6666 8919 6.697019 CGTGAACAAATCAGGAACATTTTTCT 59.303 34.615 0.00 0.00 44.81 2.52
6667 8920 7.860373 CGTGAACAAATCAGGAACATTTTTCTA 59.140 33.333 0.00 0.00 44.81 2.10
6668 8921 9.528018 GTGAACAAATCAGGAACATTTTTCTAA 57.472 29.630 0.00 0.00 39.19 2.10
6672 8925 9.750125 ACAAATCAGGAACATTTTTCTAAACTC 57.250 29.630 0.00 0.00 0.00 3.01
6673 8926 8.905702 CAAATCAGGAACATTTTTCTAAACTCG 58.094 33.333 0.00 0.00 0.00 4.18
6674 8927 7.745620 ATCAGGAACATTTTTCTAAACTCGT 57.254 32.000 0.00 0.00 0.00 4.18
6675 8928 6.954944 TCAGGAACATTTTTCTAAACTCGTG 58.045 36.000 0.00 0.00 0.00 4.35
6676 8929 6.764085 TCAGGAACATTTTTCTAAACTCGTGA 59.236 34.615 0.00 0.00 30.44 4.35
6677 8930 7.281324 TCAGGAACATTTTTCTAAACTCGTGAA 59.719 33.333 0.00 0.00 30.23 3.18
6678 8931 7.376072 CAGGAACATTTTTCTAAACTCGTGAAC 59.624 37.037 0.00 0.00 0.00 3.18
6679 8932 7.066525 AGGAACATTTTTCTAAACTCGTGAACA 59.933 33.333 0.00 0.00 0.00 3.18
6680 8933 7.860872 GGAACATTTTTCTAAACTCGTGAACAT 59.139 33.333 0.00 0.00 0.00 2.71
6681 8934 9.872757 GAACATTTTTCTAAACTCGTGAACATA 57.127 29.630 0.00 0.00 0.00 2.29
6686 8939 9.483916 TTTTTCTAAACTCGTGAACATATCTGA 57.516 29.630 0.00 0.00 0.00 3.27
6687 8940 9.483916 TTTTCTAAACTCGTGAACATATCTGAA 57.516 29.630 0.00 0.00 0.00 3.02
6688 8941 8.689251 TTCTAAACTCGTGAACATATCTGAAG 57.311 34.615 0.00 0.00 0.00 3.02
6689 8942 7.827701 TCTAAACTCGTGAACATATCTGAAGT 58.172 34.615 0.00 0.00 0.00 3.01
6690 8943 8.304596 TCTAAACTCGTGAACATATCTGAAGTT 58.695 33.333 0.00 0.00 0.00 2.66
6691 8944 6.712241 AACTCGTGAACATATCTGAAGTTG 57.288 37.500 0.00 0.00 0.00 3.16
6692 8945 5.784177 ACTCGTGAACATATCTGAAGTTGT 58.216 37.500 0.00 0.00 0.00 3.32
6693 8946 5.635280 ACTCGTGAACATATCTGAAGTTGTG 59.365 40.000 0.00 0.00 0.00 3.33
6694 8947 5.778862 TCGTGAACATATCTGAAGTTGTGA 58.221 37.500 0.00 0.00 0.00 3.58
6695 8948 6.220201 TCGTGAACATATCTGAAGTTGTGAA 58.780 36.000 0.00 0.00 0.00 3.18
6696 8949 6.145534 TCGTGAACATATCTGAAGTTGTGAAC 59.854 38.462 0.00 0.00 0.00 3.18
6697 8950 6.073819 CGTGAACATATCTGAAGTTGTGAACA 60.074 38.462 0.00 0.00 0.00 3.18
6698 8951 7.360353 CGTGAACATATCTGAAGTTGTGAACAT 60.360 37.037 0.00 0.00 0.00 2.71
6699 8952 8.292448 GTGAACATATCTGAAGTTGTGAACATT 58.708 33.333 0.00 0.00 0.00 2.71
6700 8953 8.849168 TGAACATATCTGAAGTTGTGAACATTT 58.151 29.630 0.00 0.00 0.00 2.32
6701 8954 9.683069 GAACATATCTGAAGTTGTGAACATTTT 57.317 29.630 0.00 0.00 0.00 1.82
6702 8955 9.683069 AACATATCTGAAGTTGTGAACATTTTC 57.317 29.630 0.00 0.00 0.00 2.29
6703 8956 8.849168 ACATATCTGAAGTTGTGAACATTTTCA 58.151 29.630 8.78 8.78 39.55 2.69
6704 8957 9.681692 CATATCTGAAGTTGTGAACATTTTCAA 57.318 29.630 0.00 0.00 43.52 2.69
6707 8960 9.603921 ATCTGAAGTTGTGAACATTTTCAAAAT 57.396 25.926 0.65 0.00 43.52 1.82
6708 8961 9.086336 TCTGAAGTTGTGAACATTTTCAAAATC 57.914 29.630 0.65 0.00 43.52 2.17
6709 8962 8.768957 TGAAGTTGTGAACATTTTCAAAATCA 57.231 26.923 0.65 0.00 43.52 2.57
6710 8963 9.381033 TGAAGTTGTGAACATTTTCAAAATCAT 57.619 25.926 0.65 0.00 43.52 2.45
6711 8964 9.640974 GAAGTTGTGAACATTTTCAAAATCATG 57.359 29.630 0.65 0.00 43.52 3.07
6712 8965 8.945481 AGTTGTGAACATTTTCAAAATCATGA 57.055 26.923 0.00 0.00 43.52 3.07
6713 8966 9.381033 AGTTGTGAACATTTTCAAAATCATGAA 57.619 25.926 0.00 0.00 43.52 2.57
6714 8967 9.424659 GTTGTGAACATTTTCAAAATCATGAAC 57.575 29.630 0.00 0.00 43.52 3.18
6715 8968 8.713737 TGTGAACATTTTCAAAATCATGAACA 57.286 26.923 0.00 0.00 43.52 3.18
6716 8969 9.327628 TGTGAACATTTTCAAAATCATGAACAT 57.672 25.926 0.00 0.00 43.52 2.71
6792 9045 6.710692 ATTTCTTGAATCGGCAAACATTTC 57.289 33.333 0.00 0.00 0.00 2.17
6793 9046 5.452078 TTCTTGAATCGGCAAACATTTCT 57.548 34.783 0.00 0.00 0.00 2.52
6794 9047 6.567687 TTCTTGAATCGGCAAACATTTCTA 57.432 33.333 0.00 0.00 0.00 2.10
6795 9048 6.182039 TCTTGAATCGGCAAACATTTCTAG 57.818 37.500 0.00 0.00 0.00 2.43
6796 9049 5.937540 TCTTGAATCGGCAAACATTTCTAGA 59.062 36.000 0.00 0.00 0.00 2.43
6797 9050 6.429692 TCTTGAATCGGCAAACATTTCTAGAA 59.570 34.615 0.00 0.00 29.54 2.10
6798 9051 6.757897 TGAATCGGCAAACATTTCTAGAAT 57.242 33.333 5.89 0.00 0.00 2.40
6799 9052 6.785191 TGAATCGGCAAACATTTCTAGAATC 58.215 36.000 5.89 0.00 0.00 2.52
6800 9053 4.857871 TCGGCAAACATTTCTAGAATCG 57.142 40.909 5.89 3.11 0.00 3.34
6801 9054 4.500127 TCGGCAAACATTTCTAGAATCGA 58.500 39.130 5.89 0.00 0.00 3.59
6802 9055 4.328983 TCGGCAAACATTTCTAGAATCGAC 59.671 41.667 5.89 0.00 0.00 4.20
6803 9056 4.578601 GGCAAACATTTCTAGAATCGACG 58.421 43.478 5.89 0.00 0.00 5.12
6804 9057 4.328983 GGCAAACATTTCTAGAATCGACGA 59.671 41.667 5.89 0.00 0.00 4.20
6805 9058 5.163893 GGCAAACATTTCTAGAATCGACGAA 60.164 40.000 5.89 0.00 0.00 3.85
6806 9059 5.728507 GCAAACATTTCTAGAATCGACGAAC 59.271 40.000 5.89 0.00 0.00 3.95
6807 9060 6.401153 GCAAACATTTCTAGAATCGACGAACT 60.401 38.462 5.89 7.38 0.00 3.01
6808 9061 7.510630 CAAACATTTCTAGAATCGACGAACTT 58.489 34.615 5.89 0.00 0.00 2.66
6809 9062 7.653767 AACATTTCTAGAATCGACGAACTTT 57.346 32.000 5.89 0.00 0.00 2.66
6810 9063 7.653767 ACATTTCTAGAATCGACGAACTTTT 57.346 32.000 5.89 0.00 0.00 2.27
6811 9064 8.084590 ACATTTCTAGAATCGACGAACTTTTT 57.915 30.769 5.89 0.00 0.00 1.94
6837 9090 8.443953 TTGGAAATTAGTGGAACAATTTTTGG 57.556 30.769 0.00 0.00 44.16 3.28
6838 9091 7.796054 TGGAAATTAGTGGAACAATTTTTGGA 58.204 30.769 0.00 0.00 44.16 3.53
6839 9092 8.267894 TGGAAATTAGTGGAACAATTTTTGGAA 58.732 29.630 0.00 0.00 44.16 3.53
6840 9093 9.283768 GGAAATTAGTGGAACAATTTTTGGAAT 57.716 29.630 0.00 0.00 44.16 3.01
6843 9096 9.844257 AATTAGTGGAACAATTTTTGGAATTCA 57.156 25.926 7.93 0.00 44.16 2.57
6844 9097 8.655651 TTAGTGGAACAATTTTTGGAATTCAC 57.344 30.769 7.93 0.00 44.16 3.18
6845 9098 5.752955 AGTGGAACAATTTTTGGAATTCACG 59.247 36.000 7.93 0.00 44.16 4.35
6846 9099 5.751028 GTGGAACAATTTTTGGAATTCACGA 59.249 36.000 7.93 0.00 44.16 4.35
6847 9100 6.256757 GTGGAACAATTTTTGGAATTCACGAA 59.743 34.615 7.93 0.48 44.16 3.85
6848 9101 6.256757 TGGAACAATTTTTGGAATTCACGAAC 59.743 34.615 7.93 0.00 31.92 3.95
6849 9102 6.256757 GGAACAATTTTTGGAATTCACGAACA 59.743 34.615 7.93 0.00 34.12 3.18
6850 9103 7.042119 GGAACAATTTTTGGAATTCACGAACAT 60.042 33.333 7.93 0.00 34.12 2.71
6851 9104 7.784633 ACAATTTTTGGAATTCACGAACATT 57.215 28.000 7.93 5.41 34.12 2.71
6852 9105 8.207521 ACAATTTTTGGAATTCACGAACATTT 57.792 26.923 7.93 0.00 34.12 2.32
6853 9106 8.672815 ACAATTTTTGGAATTCACGAACATTTT 58.327 25.926 7.93 0.00 34.12 1.82
6854 9107 9.500864 CAATTTTTGGAATTCACGAACATTTTT 57.499 25.926 7.93 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.969250 GATTGGCCGGCGGAGAACA 62.969 63.158 33.44 19.10 0.00 3.18
26 27 0.832626 GGGGCAAGGGATTTGATTGG 59.167 55.000 0.00 0.00 39.21 3.16
28 29 0.041090 ACGGGGCAAGGGATTTGATT 59.959 50.000 0.00 0.00 39.21 2.57
29 30 0.041090 AACGGGGCAAGGGATTTGAT 59.959 50.000 0.00 0.00 39.21 2.57
30 31 0.897863 CAACGGGGCAAGGGATTTGA 60.898 55.000 0.00 0.00 39.21 2.69
31 32 1.591183 CAACGGGGCAAGGGATTTG 59.409 57.895 0.00 0.00 39.88 2.32
32 33 2.282783 GCAACGGGGCAAGGGATTT 61.283 57.895 0.00 0.00 0.00 2.17
33 34 2.679996 GCAACGGGGCAAGGGATT 60.680 61.111 0.00 0.00 0.00 3.01
69 70 1.008329 AGATCGGTTCTCTCGTCGTC 58.992 55.000 0.00 0.00 0.00 4.20
143 144 2.447586 TTTTGGCCAAAGGATGCGGC 62.448 55.000 28.79 0.00 45.47 6.53
158 159 0.948678 TCCCTTCGCTTTCGGTTTTG 59.051 50.000 0.00 0.00 36.13 2.44
277 279 3.057946 GCCTGAACAGAAAACAGATGGAC 60.058 47.826 3.19 0.00 34.07 4.02
279 281 2.229784 GGCCTGAACAGAAAACAGATGG 59.770 50.000 0.00 0.00 34.07 3.51
280 282 2.095567 CGGCCTGAACAGAAAACAGATG 60.096 50.000 0.00 0.00 34.07 2.90
281 283 2.154462 CGGCCTGAACAGAAAACAGAT 58.846 47.619 0.00 0.00 34.07 2.90
282 284 1.593196 CGGCCTGAACAGAAAACAGA 58.407 50.000 0.00 0.00 34.07 3.41
283 285 0.040067 GCGGCCTGAACAGAAAACAG 60.040 55.000 0.00 0.00 0.00 3.16
284 286 1.452145 GGCGGCCTGAACAGAAAACA 61.452 55.000 12.87 0.00 0.00 2.83
285 287 1.285950 GGCGGCCTGAACAGAAAAC 59.714 57.895 12.87 0.00 0.00 2.43
286 288 2.258013 CGGCGGCCTGAACAGAAAA 61.258 57.895 18.34 0.00 0.00 2.29
287 289 2.668212 CGGCGGCCTGAACAGAAA 60.668 61.111 18.34 0.00 0.00 2.52
368 370 5.797051 AGGTGATGCATGCATTTTTAAGTT 58.203 33.333 32.60 9.63 36.70 2.66
369 371 5.410355 AGGTGATGCATGCATTTTTAAGT 57.590 34.783 32.60 10.44 36.70 2.24
370 372 6.539324 CAAAGGTGATGCATGCATTTTTAAG 58.461 36.000 32.60 16.70 36.70 1.85
371 373 5.106634 GCAAAGGTGATGCATGCATTTTTAA 60.107 36.000 32.60 14.34 43.29 1.52
410 419 1.477700 TGCCAGCCACTGCATTATTTC 59.522 47.619 0.00 0.00 41.13 2.17
420 429 4.962836 GTGCCACTGCCAGCCACT 62.963 66.667 0.00 0.00 36.33 4.00
425 434 3.797507 AAGGTGGTGCCACTGCCAG 62.798 63.158 19.37 0.00 45.52 4.85
426 435 3.372422 AAAGGTGGTGCCACTGCCA 62.372 57.895 19.37 0.00 45.52 4.92
427 436 2.521708 AAAGGTGGTGCCACTGCC 60.522 61.111 19.37 4.93 45.52 4.85
428 437 2.730094 CAAAGGTGGTGCCACTGC 59.270 61.111 19.37 5.55 45.52 4.40
480 500 2.413837 ACAGTACACCAAACTCGATGC 58.586 47.619 0.00 0.00 0.00 3.91
616 656 0.112412 CTGGTGTACCCTTTTGCCCT 59.888 55.000 0.00 0.00 34.29 5.19
633 676 0.035056 ATGCCCCTTTTCCGTCTCTG 60.035 55.000 0.00 0.00 0.00 3.35
679 734 3.440522 GTCCTCTTTGTGGCCAAATCTAC 59.559 47.826 7.24 0.00 39.72 2.59
691 746 2.289694 CCACGAATCCAGTCCTCTTTGT 60.290 50.000 0.00 0.00 0.00 2.83
724 779 3.009473 AGCACTAATCTCACATGGTTGGT 59.991 43.478 0.00 0.00 0.00 3.67
725 780 3.614092 AGCACTAATCTCACATGGTTGG 58.386 45.455 0.00 0.00 0.00 3.77
726 781 5.181811 TCAAAGCACTAATCTCACATGGTTG 59.818 40.000 0.00 0.00 31.77 3.77
730 785 6.204301 CCCTATCAAAGCACTAATCTCACATG 59.796 42.308 0.00 0.00 0.00 3.21
732 787 5.425217 TCCCTATCAAAGCACTAATCTCACA 59.575 40.000 0.00 0.00 0.00 3.58
790 845 0.178767 ATGCGGAATGCTGCTAGTCA 59.821 50.000 5.96 0.00 46.76 3.41
793 848 0.590195 GGAATGCGGAATGCTGCTAG 59.410 55.000 5.96 0.00 46.76 3.42
840 897 7.428020 TCTGAACATTCTTGGATGAACAAAAG 58.572 34.615 0.00 0.00 0.00 2.27
845 902 7.596494 TGAAATCTGAACATTCTTGGATGAAC 58.404 34.615 0.00 0.00 0.00 3.18
847 904 7.170277 TCTGAAATCTGAACATTCTTGGATGA 58.830 34.615 0.00 0.00 0.00 2.92
849 906 7.886970 TCTTCTGAAATCTGAACATTCTTGGAT 59.113 33.333 0.00 0.00 31.85 3.41
852 909 9.909644 AAATCTTCTGAAATCTGAACATTCTTG 57.090 29.630 4.78 0.00 31.85 3.02
907 968 4.216257 AGTGTGACCTGCATACAAATGTTC 59.784 41.667 0.00 0.00 40.69 3.18
937 999 0.605589 CTGCTCGACTCTTTCCCAGT 59.394 55.000 0.00 0.00 0.00 4.00
949 1011 0.808847 GCATGTCAGATGCTGCTCGA 60.809 55.000 0.00 0.00 41.52 4.04
1086 1148 4.041762 TCCATGACGGGGTTGCCC 62.042 66.667 0.00 0.00 44.51 5.36
1161 1223 0.866061 CACCGCGGTTCATCTCGTAG 60.866 60.000 32.11 9.60 0.00 3.51
1230 1292 2.160853 ACCTGACCCCCAGAAACCC 61.161 63.158 0.00 0.00 45.78 4.11
1233 1295 1.133809 CCTCACCTGACCCCCAGAAA 61.134 60.000 0.00 0.00 45.78 2.52
1251 1313 1.144936 ATTGCCACTCGAGCTAGCC 59.855 57.895 13.61 1.79 0.00 3.93
1275 1337 1.656652 CGTTGGAGCTCCCATAGTTG 58.343 55.000 29.95 8.88 46.10 3.16
1367 1429 5.859205 ATCCACATTATCCAAAGAAAGGC 57.141 39.130 0.00 0.00 0.00 4.35
1389 1451 2.937873 GCCACTGGCGTTAAGGTTGATA 60.938 50.000 3.73 0.00 39.62 2.15
1467 1532 2.813226 TACGGGAACACCCAGCATGC 62.813 60.000 10.51 10.51 43.64 4.06
1539 1604 0.388134 GCTGCTCGTCGTCTAAACCA 60.388 55.000 0.00 0.00 0.00 3.67
1560 1625 0.036306 TCAAAGAAGGGAACGGCTCC 59.964 55.000 0.00 0.00 44.54 4.70
1609 1674 2.191641 GTCCTCTGGCATCAGGGC 59.808 66.667 11.67 7.07 40.13 5.19
1627 1692 2.508526 ACTGCCTGGTCTTTGATCAAC 58.491 47.619 7.89 0.00 0.00 3.18
1692 1757 1.153289 CTGCCCATGGACTCCTTCG 60.153 63.158 15.22 0.00 0.00 3.79
1776 1841 1.740025 GGAGCCGGATTGAAACTTGAG 59.260 52.381 5.05 0.00 0.00 3.02
1810 1875 3.125316 GCCAACAAGAAGTTATGAGACGG 59.875 47.826 0.00 0.00 38.74 4.79
1812 1877 4.393371 GGAGCCAACAAGAAGTTATGAGAC 59.607 45.833 0.00 0.00 38.74 3.36
1830 1895 0.462759 CCTCGATGGAACTTGGAGCC 60.463 60.000 0.00 0.00 38.35 4.70
1845 1910 0.317479 AGTTCGGGAGTTGTTCCTCG 59.683 55.000 0.00 0.00 45.98 4.63
1925 1990 7.645058 AAACTTCTCTGTGAATTTCCTGAAA 57.355 32.000 0.00 0.00 33.71 2.69
2226 2291 2.763448 CCTCCCACTAACTTCCTCTCTG 59.237 54.545 0.00 0.00 0.00 3.35
2240 2305 2.158885 GGAGCTACAAGATTCCTCCCAC 60.159 54.545 0.00 0.00 36.85 4.61
2277 2342 2.955022 CTAGTGCAGCATGAGGGGCC 62.955 65.000 0.00 0.00 39.69 5.80
2319 2387 8.522830 GGATTGTCAGAATTCCAATTAGACAAA 58.477 33.333 22.97 14.00 45.70 2.83
2460 2528 9.907229 AAAGTTACCTCTGATAAATTTCTAGGG 57.093 33.333 0.00 0.00 26.74 3.53
2619 2687 6.424032 GTTCCAATAGAAACCCTGACCTTAT 58.576 40.000 0.00 0.00 35.85 1.73
2723 2791 3.985925 GGATGAACCGGTATATCGTCAAC 59.014 47.826 22.45 14.00 32.05 3.18
2818 2925 5.406780 CACTGAATACAGAGAGTTTGGACAC 59.593 44.000 0.00 0.00 46.03 3.67
3037 3150 4.401202 TGCATGAAGGTCATACGAGAAGTA 59.599 41.667 0.00 0.00 34.28 2.24
3042 3155 5.490139 AATTTGCATGAAGGTCATACGAG 57.510 39.130 0.00 0.00 34.28 4.18
3051 3164 8.225107 CAGAACAATACAAAATTTGCATGAAGG 58.775 33.333 5.52 0.00 0.00 3.46
3185 3852 7.664758 ACTAGTGTGTTACAAGTTAACTAGGG 58.335 38.462 8.92 4.51 39.80 3.53
3248 3915 2.159338 CCAGATCCAAAATCCAGCAACG 60.159 50.000 0.00 0.00 0.00 4.10
3255 3922 2.826674 TGGTCCCAGATCCAAAATCC 57.173 50.000 0.00 0.00 0.00 3.01
3270 3937 7.094549 TGGTTTTGCACTACTATTTACATGGTC 60.095 37.037 0.00 0.00 0.00 4.02
3321 3988 3.456380 TCCCTTTGCTTTTATCCTGCT 57.544 42.857 0.00 0.00 0.00 4.24
3378 4045 4.500603 GTTCTAGAGGAACGTTCTGACA 57.499 45.455 26.32 10.01 43.75 3.58
3402 4076 8.625651 AGACTTGTGCTACTTGATGTATAGTAG 58.374 37.037 0.00 0.00 44.23 2.57
3403 4077 8.521170 AGACTTGTGCTACTTGATGTATAGTA 57.479 34.615 0.00 0.00 0.00 1.82
3404 4078 7.411486 AGACTTGTGCTACTTGATGTATAGT 57.589 36.000 0.00 0.00 0.00 2.12
3468 4145 9.640952 AGGATAAGATCTCCTATTCTAGTATGC 57.359 37.037 0.00 0.00 41.42 3.14
3504 4181 7.228706 ACAAAAGACACTCGGAAACTTATCAAT 59.771 33.333 0.00 0.00 0.00 2.57
3505 4182 6.540914 ACAAAAGACACTCGGAAACTTATCAA 59.459 34.615 0.00 0.00 0.00 2.57
3506 4183 6.053005 ACAAAAGACACTCGGAAACTTATCA 58.947 36.000 0.00 0.00 0.00 2.15
3507 4184 6.541111 ACAAAAGACACTCGGAAACTTATC 57.459 37.500 0.00 0.00 0.00 1.75
3553 4231 4.176271 TCGAGTAATGTTCACTCTGCATG 58.824 43.478 0.00 0.00 40.26 4.06
3554 4232 4.456280 TCGAGTAATGTTCACTCTGCAT 57.544 40.909 0.00 0.00 40.26 3.96
4280 5022 2.906568 AGGGGCAAAATTGGAAGACAT 58.093 42.857 0.00 0.00 0.00 3.06
4413 5155 9.605951 AGTAAATCCCCAAATATATCAGCAAAT 57.394 29.630 0.00 0.00 0.00 2.32
4425 5167 6.755542 TGGAAACAAAGTAAATCCCCAAAT 57.244 33.333 0.00 0.00 37.44 2.32
4646 5389 7.339466 GCTAACATTTCCTATTCTTTCCTCCAA 59.661 37.037 0.00 0.00 0.00 3.53
4751 5494 3.379057 TGACAAATACAGCATGGCTCATG 59.621 43.478 9.94 9.94 43.62 3.07
4762 5505 9.254133 CAGAATACTGATACCTGACAAATACAG 57.746 37.037 0.00 0.00 46.03 2.74
4809 5556 9.199982 TCCAAGTTTAAACATAAAGAGAGTACG 57.800 33.333 20.06 0.00 0.00 3.67
4827 5574 5.733676 AGCAGTTTGATGTTTTCCAAGTTT 58.266 33.333 0.00 0.00 0.00 2.66
4877 5633 6.833041 TGTGACCTACTTGGATTCAAAACTA 58.167 36.000 0.00 0.00 39.71 2.24
5021 5778 4.327982 ACTAAGTCGATGGATGGATGTG 57.672 45.455 0.00 0.00 0.00 3.21
5056 6946 7.727181 AGTATATTGTGTCCATAACTCCAGAC 58.273 38.462 0.00 0.00 0.00 3.51
5091 6982 4.220821 TCAGCCAAAAGTTTGTGGTACAAA 59.779 37.500 14.38 3.20 44.91 2.83
5158 7050 8.477419 AACCAAAATCCATACCCATATGTAAG 57.523 34.615 1.24 0.00 37.12 2.34
5165 7057 4.324176 GGCAAAACCAAAATCCATACCCAT 60.324 41.667 0.00 0.00 38.86 4.00
5174 7067 4.625311 CCACGATTAGGCAAAACCAAAATC 59.375 41.667 0.00 0.00 43.14 2.17
5215 7109 9.753674 AGACCAAAATTCATACTTCCAAATCTA 57.246 29.630 0.00 0.00 0.00 1.98
5240 7134 9.241317 GTACTTCCAAATCAATGATTATGCAAG 57.759 33.333 9.09 12.59 31.46 4.01
5268 7162 8.133627 CAGAGCATAGCTTTAGCAATGTAAAAT 58.866 33.333 4.33 0.00 45.16 1.82
5269 7163 7.121168 ACAGAGCATAGCTTTAGCAATGTAAAA 59.879 33.333 4.33 0.00 45.16 1.52
5270 7164 6.599244 ACAGAGCATAGCTTTAGCAATGTAAA 59.401 34.615 4.33 0.00 45.16 2.01
5273 7167 4.521146 ACAGAGCATAGCTTTAGCAATGT 58.479 39.130 4.33 0.40 45.16 2.71
5274 7168 4.573607 TGACAGAGCATAGCTTTAGCAATG 59.426 41.667 4.33 0.00 45.16 2.82
5275 7169 4.774124 TGACAGAGCATAGCTTTAGCAAT 58.226 39.130 4.33 0.00 45.16 3.56
5276 7170 4.081476 TCTGACAGAGCATAGCTTTAGCAA 60.081 41.667 0.00 0.00 45.16 3.91
5277 7171 3.448660 TCTGACAGAGCATAGCTTTAGCA 59.551 43.478 0.00 0.00 45.16 3.49
5279 7173 5.261209 AGTCTGACAGAGCATAGCTTTAG 57.739 43.478 5.10 0.00 39.88 1.85
5280 7174 5.394663 GGAAGTCTGACAGAGCATAGCTTTA 60.395 44.000 5.10 0.00 39.88 1.85
5286 7477 5.510430 TCTTAGGAAGTCTGACAGAGCATA 58.490 41.667 5.10 0.00 0.00 3.14
5317 7508 3.075148 CCTAGGCATGATGCTGAATGAG 58.925 50.000 17.84 5.74 44.28 2.90
5341 7532 6.339730 TGTACTGAAACGTTCTCCTAAACAA 58.660 36.000 0.00 0.00 0.00 2.83
5343 7534 6.423001 ACATGTACTGAAACGTTCTCCTAAAC 59.577 38.462 0.00 0.00 0.00 2.01
5347 7538 4.202223 ACACATGTACTGAAACGTTCTCCT 60.202 41.667 0.00 0.00 0.00 3.69
5349 7540 5.006358 ACAACACATGTACTGAAACGTTCTC 59.994 40.000 0.00 2.36 41.63 2.87
5357 7548 7.004555 AGATCCTAACAACACATGTACTGAA 57.995 36.000 12.12 1.40 42.99 3.02
5358 7549 6.605471 AGATCCTAACAACACATGTACTGA 57.395 37.500 12.12 0.00 42.99 3.41
5359 7550 6.402550 GCAAGATCCTAACAACACATGTACTG 60.403 42.308 0.00 0.97 42.99 2.74
5360 7551 5.643777 GCAAGATCCTAACAACACATGTACT 59.356 40.000 0.00 0.00 42.99 2.73
5367 7558 3.758554 ACATGGCAAGATCCTAACAACAC 59.241 43.478 0.00 0.00 0.00 3.32
5368 7559 4.032960 ACATGGCAAGATCCTAACAACA 57.967 40.909 0.00 0.00 0.00 3.33
5369 7560 5.391312 AAACATGGCAAGATCCTAACAAC 57.609 39.130 0.00 0.00 0.00 3.32
5370 7561 7.118723 AGATAAACATGGCAAGATCCTAACAA 58.881 34.615 0.00 0.00 0.00 2.83
5371 7562 6.662755 AGATAAACATGGCAAGATCCTAACA 58.337 36.000 0.00 0.00 0.00 2.41
5372 7563 7.283127 TGAAGATAAACATGGCAAGATCCTAAC 59.717 37.037 0.00 0.00 0.00 2.34
5373 7564 7.283127 GTGAAGATAAACATGGCAAGATCCTAA 59.717 37.037 0.00 0.00 0.00 2.69
5384 7575 8.733458 TCATTTGAAGAGTGAAGATAAACATGG 58.267 33.333 0.00 0.00 0.00 3.66
5470 7662 3.223674 TGAACAGGGGAAAAGAAGGTC 57.776 47.619 0.00 0.00 0.00 3.85
5664 7877 4.795970 ATAAAATGATCTTGCGGTCGAC 57.204 40.909 7.13 7.13 0.00 4.20
5778 7992 4.582656 TCGAAACCATGACCAGTTTTGAAT 59.417 37.500 10.90 0.00 41.30 2.57
5781 7997 3.980646 TCGAAACCATGACCAGTTTTG 57.019 42.857 0.00 0.20 36.36 2.44
5799 8015 7.739911 CAGTTTTGAACCTTTCTTTGTTTTTCG 59.260 33.333 0.00 0.00 0.00 3.46
5805 8021 5.738619 ACCAGTTTTGAACCTTTCTTTGT 57.261 34.783 0.00 0.00 0.00 2.83
5806 8022 9.244799 GTAATACCAGTTTTGAACCTTTCTTTG 57.755 33.333 0.00 0.00 0.00 2.77
5813 8030 5.948842 ACAGGTAATACCAGTTTTGAACCT 58.051 37.500 12.54 0.00 41.95 3.50
5958 8178 2.223377 CAGAAAACAGTAGACCGGCAAC 59.777 50.000 0.00 0.00 0.00 4.17
5962 8182 4.092968 GCATAACAGAAAACAGTAGACCGG 59.907 45.833 0.00 0.00 0.00 5.28
5965 8185 6.593978 CACAGCATAACAGAAAACAGTAGAC 58.406 40.000 0.00 0.00 0.00 2.59
5976 8196 2.567169 ACTACCAGCACAGCATAACAGA 59.433 45.455 0.00 0.00 0.00 3.41
5977 8197 2.977914 ACTACCAGCACAGCATAACAG 58.022 47.619 0.00 0.00 0.00 3.16
5985 8205 4.082787 CCAAAAACCATACTACCAGCACAG 60.083 45.833 0.00 0.00 0.00 3.66
5998 8218 4.597075 AGGGTTAATTCAGCCAAAAACCAT 59.403 37.500 10.36 0.00 36.46 3.55
6007 8227 2.231235 CCACAACAGGGTTAATTCAGCC 59.769 50.000 0.00 0.00 34.19 4.85
6016 8236 1.444933 TCCAGATCCACAACAGGGTT 58.555 50.000 0.00 0.00 0.00 4.11
6017 8237 1.444933 TTCCAGATCCACAACAGGGT 58.555 50.000 0.00 0.00 0.00 4.34
6050 8270 3.228017 TCAGGAACGCCACGGTCA 61.228 61.111 7.39 0.00 46.28 4.02
6136 8358 3.838317 ACAGGTGACACATACAGGTACAT 59.162 43.478 8.08 0.00 0.00 2.29
6210 8438 1.615919 CCCCAAAGTTCGGCCACTAAT 60.616 52.381 2.24 0.00 0.00 1.73
6211 8439 0.250989 CCCCAAAGTTCGGCCACTAA 60.251 55.000 2.24 0.00 0.00 2.24
6212 8440 1.377229 CCCCAAAGTTCGGCCACTA 59.623 57.895 2.24 0.00 0.00 2.74
6213 8441 2.115266 CCCCAAAGTTCGGCCACT 59.885 61.111 2.24 0.00 0.00 4.00
6214 8442 3.680786 GCCCCAAAGTTCGGCCAC 61.681 66.667 2.24 0.00 36.63 5.01
6215 8443 3.897122 AGCCCCAAAGTTCGGCCA 61.897 61.111 2.24 0.00 44.13 5.36
6216 8444 3.373565 CAGCCCCAAAGTTCGGCC 61.374 66.667 0.00 0.00 44.13 6.13
6217 8445 4.056125 GCAGCCCCAAAGTTCGGC 62.056 66.667 1.27 1.27 43.35 5.54
6218 8446 3.373565 GGCAGCCCCAAAGTTCGG 61.374 66.667 0.00 0.00 0.00 4.30
6219 8447 1.463553 AAAGGCAGCCCCAAAGTTCG 61.464 55.000 8.22 0.00 35.39 3.95
6280 8529 2.202932 GATGCCGTCGTGCTCCAT 60.203 61.111 7.14 0.00 0.00 3.41
6281 8530 4.794439 CGATGCCGTCGTGCTCCA 62.794 66.667 0.00 0.00 45.19 3.86
6328 8577 4.477975 GCTGGACGTCTACGCGCT 62.478 66.667 16.46 0.00 44.43 5.92
6354 8603 2.960129 GAATACAGCGACCGGCCG 60.960 66.667 21.04 21.04 45.17 6.13
6416 8665 1.305930 GGCCTGACACGAACCCATTC 61.306 60.000 0.00 0.00 0.00 2.67
6449 8702 2.938838 TCGTTCAGGAATTGGTGGTTT 58.061 42.857 0.00 0.00 0.00 3.27
6450 8703 2.649531 TCGTTCAGGAATTGGTGGTT 57.350 45.000 0.00 0.00 0.00 3.67
6451 8704 2.504367 CTTCGTTCAGGAATTGGTGGT 58.496 47.619 0.00 0.00 0.00 4.16
6452 8705 1.812571 CCTTCGTTCAGGAATTGGTGG 59.187 52.381 0.00 0.00 35.71 4.61
6453 8706 1.812571 CCCTTCGTTCAGGAATTGGTG 59.187 52.381 0.29 0.00 35.71 4.17
6454 8707 1.886655 GCCCTTCGTTCAGGAATTGGT 60.887 52.381 0.29 0.00 35.71 3.67
6455 8708 0.811281 GCCCTTCGTTCAGGAATTGG 59.189 55.000 0.29 0.00 35.71 3.16
6456 8709 1.533625 TGCCCTTCGTTCAGGAATTG 58.466 50.000 0.29 0.00 35.71 2.32
6457 8710 2.514458 ATGCCCTTCGTTCAGGAATT 57.486 45.000 0.29 0.00 35.71 2.17
6458 8711 2.421529 GGTATGCCCTTCGTTCAGGAAT 60.422 50.000 0.00 0.00 35.71 3.01
6459 8712 1.065709 GGTATGCCCTTCGTTCAGGAA 60.066 52.381 0.00 0.00 35.71 3.36
6460 8713 0.539986 GGTATGCCCTTCGTTCAGGA 59.460 55.000 0.00 0.00 35.71 3.86
6461 8714 0.251916 TGGTATGCCCTTCGTTCAGG 59.748 55.000 0.00 0.00 0.00 3.86
6462 8715 2.213499 GATGGTATGCCCTTCGTTCAG 58.787 52.381 0.00 0.00 0.00 3.02
6463 8716 2.325583 GATGGTATGCCCTTCGTTCA 57.674 50.000 0.00 0.00 0.00 3.18
6468 8721 4.065110 GGCGATGGTATGCCCTTC 57.935 61.111 0.00 0.00 45.73 3.46
6473 8726 0.792640 CGATTCAGGCGATGGTATGC 59.207 55.000 0.00 0.00 0.00 3.14
6474 8727 1.432514 CCGATTCAGGCGATGGTATG 58.567 55.000 0.00 0.00 0.00 2.39
6475 8728 3.914984 CCGATTCAGGCGATGGTAT 57.085 52.632 0.00 0.00 0.00 2.73
6484 8737 2.275318 GACTCAGAAAGCCGATTCAGG 58.725 52.381 0.00 0.00 0.00 3.86
6485 8738 1.923204 CGACTCAGAAAGCCGATTCAG 59.077 52.381 0.00 0.00 0.00 3.02
6486 8739 1.544246 TCGACTCAGAAAGCCGATTCA 59.456 47.619 0.00 0.00 0.00 2.57
6487 8740 2.279582 TCGACTCAGAAAGCCGATTC 57.720 50.000 0.00 0.00 0.00 2.52
6488 8741 2.743636 TTCGACTCAGAAAGCCGATT 57.256 45.000 0.00 0.00 0.00 3.34
6489 8742 2.969628 ATTCGACTCAGAAAGCCGAT 57.030 45.000 0.00 0.00 33.43 4.18
6490 8743 3.380320 TCATATTCGACTCAGAAAGCCGA 59.620 43.478 0.00 0.00 33.43 5.54
6491 8744 3.706698 TCATATTCGACTCAGAAAGCCG 58.293 45.455 0.00 0.00 33.43 5.52
6492 8745 4.271291 GGTTCATATTCGACTCAGAAAGCC 59.729 45.833 0.00 0.00 33.43 4.35
6493 8746 4.271291 GGGTTCATATTCGACTCAGAAAGC 59.729 45.833 0.00 0.00 33.43 3.51
6494 8747 5.521735 CAGGGTTCATATTCGACTCAGAAAG 59.478 44.000 0.00 0.00 33.43 2.62
6495 8748 5.419542 CAGGGTTCATATTCGACTCAGAAA 58.580 41.667 0.00 0.00 33.43 2.52
6496 8749 4.680708 GCAGGGTTCATATTCGACTCAGAA 60.681 45.833 0.00 0.00 34.31 3.02
6497 8750 3.181475 GCAGGGTTCATATTCGACTCAGA 60.181 47.826 0.00 0.00 0.00 3.27
6498 8751 3.126831 GCAGGGTTCATATTCGACTCAG 58.873 50.000 0.00 0.00 0.00 3.35
6499 8752 2.158957 GGCAGGGTTCATATTCGACTCA 60.159 50.000 0.00 0.00 0.00 3.41
6500 8753 2.484889 GGCAGGGTTCATATTCGACTC 58.515 52.381 0.00 0.00 0.00 3.36
6501 8754 1.202533 CGGCAGGGTTCATATTCGACT 60.203 52.381 0.00 0.00 0.00 4.18
6502 8755 1.217882 CGGCAGGGTTCATATTCGAC 58.782 55.000 0.00 0.00 0.00 4.20
6503 8756 0.531974 GCGGCAGGGTTCATATTCGA 60.532 55.000 0.00 0.00 0.00 3.71
6504 8757 1.831389 CGCGGCAGGGTTCATATTCG 61.831 60.000 0.00 0.00 0.00 3.34
6505 8758 0.531974 TCGCGGCAGGGTTCATATTC 60.532 55.000 6.13 0.00 0.00 1.75
6506 8759 0.107410 TTCGCGGCAGGGTTCATATT 60.107 50.000 6.13 0.00 0.00 1.28
6507 8760 0.814010 GTTCGCGGCAGGGTTCATAT 60.814 55.000 6.13 0.00 0.00 1.78
6508 8761 1.448893 GTTCGCGGCAGGGTTCATA 60.449 57.895 6.13 0.00 0.00 2.15
6509 8762 2.746277 GTTCGCGGCAGGGTTCAT 60.746 61.111 6.13 0.00 0.00 2.57
6510 8763 3.758973 TTGTTCGCGGCAGGGTTCA 62.759 57.895 6.13 0.00 0.00 3.18
6511 8764 2.458006 CTTTGTTCGCGGCAGGGTTC 62.458 60.000 6.13 0.00 0.00 3.62
6512 8765 2.517402 TTTGTTCGCGGCAGGGTT 60.517 55.556 6.13 0.00 0.00 4.11
6513 8766 2.978010 CTTTGTTCGCGGCAGGGT 60.978 61.111 6.13 0.00 0.00 4.34
6514 8767 2.668212 TCTTTGTTCGCGGCAGGG 60.668 61.111 6.13 0.00 0.00 4.45
6515 8768 2.680913 CCTCTTTGTTCGCGGCAGG 61.681 63.158 6.13 0.00 0.00 4.85
6516 8769 2.863153 CCTCTTTGTTCGCGGCAG 59.137 61.111 6.13 0.00 0.00 4.85
6517 8770 3.353836 GCCTCTTTGTTCGCGGCA 61.354 61.111 6.13 2.72 40.41 5.69
6518 8771 4.445545 CGCCTCTTTGTTCGCGGC 62.446 66.667 6.13 0.00 40.91 6.53
6520 8773 3.561924 AACAACGCCTCTTTGTTCGCG 62.562 52.381 0.00 0.00 42.26 5.87
6521 8774 0.028902 AACAACGCCTCTTTGTTCGC 59.971 50.000 0.00 0.00 42.26 4.70
6522 8775 1.063469 ACAACAACGCCTCTTTGTTCG 59.937 47.619 0.00 0.00 43.71 3.95
6523 8776 2.844122 ACAACAACGCCTCTTTGTTC 57.156 45.000 0.00 0.00 43.71 3.18
6524 8777 3.275999 AGTACAACAACGCCTCTTTGTT 58.724 40.909 0.00 0.00 45.90 2.83
6525 8778 2.914059 AGTACAACAACGCCTCTTTGT 58.086 42.857 0.00 0.00 38.88 2.83
6526 8779 3.963383 AAGTACAACAACGCCTCTTTG 57.037 42.857 0.00 0.00 0.00 2.77
6527 8780 4.700700 AGTAAGTACAACAACGCCTCTTT 58.299 39.130 0.00 0.00 0.00 2.52
6528 8781 4.332428 AGTAAGTACAACAACGCCTCTT 57.668 40.909 0.00 0.00 0.00 2.85
6529 8782 4.038883 AGAAGTAAGTACAACAACGCCTCT 59.961 41.667 0.00 0.00 0.00 3.69
6530 8783 4.304939 AGAAGTAAGTACAACAACGCCTC 58.695 43.478 0.00 0.00 0.00 4.70
6531 8784 4.332428 AGAAGTAAGTACAACAACGCCT 57.668 40.909 0.00 0.00 0.00 5.52
6532 8785 5.413969 AAAGAAGTAAGTACAACAACGCC 57.586 39.130 0.00 0.00 0.00 5.68
6533 8786 5.614382 CGAAAAGAAGTAAGTACAACAACGC 59.386 40.000 0.00 0.00 0.00 4.84
6534 8787 5.614382 GCGAAAAGAAGTAAGTACAACAACG 59.386 40.000 0.00 0.00 0.00 4.10
6535 8788 6.712549 AGCGAAAAGAAGTAAGTACAACAAC 58.287 36.000 0.00 0.00 0.00 3.32
6536 8789 6.913873 AGCGAAAAGAAGTAAGTACAACAA 57.086 33.333 0.00 0.00 0.00 2.83
6537 8790 6.314400 ACAAGCGAAAAGAAGTAAGTACAACA 59.686 34.615 0.00 0.00 0.00 3.33
6538 8791 6.712549 ACAAGCGAAAAGAAGTAAGTACAAC 58.287 36.000 0.00 0.00 0.00 3.32
6539 8792 6.759827 AGACAAGCGAAAAGAAGTAAGTACAA 59.240 34.615 0.00 0.00 0.00 2.41
6540 8793 6.278363 AGACAAGCGAAAAGAAGTAAGTACA 58.722 36.000 0.00 0.00 0.00 2.90
6541 8794 6.766452 AGACAAGCGAAAAGAAGTAAGTAC 57.234 37.500 0.00 0.00 0.00 2.73
6542 8795 8.876275 TTTAGACAAGCGAAAAGAAGTAAGTA 57.124 30.769 0.00 0.00 0.00 2.24
6543 8796 7.781548 TTTAGACAAGCGAAAAGAAGTAAGT 57.218 32.000 0.00 0.00 0.00 2.24
6622 8875 9.521503 TGTTCACGATTTTCACAAAAATATTCA 57.478 25.926 0.00 0.00 43.48 2.57
6627 8880 8.877779 TGATTTGTTCACGATTTTCACAAAAAT 58.122 25.926 0.00 0.00 45.55 1.82
6628 8881 8.244494 TGATTTGTTCACGATTTTCACAAAAA 57.756 26.923 0.00 0.00 39.94 1.94
6629 8882 7.009999 CCTGATTTGTTCACGATTTTCACAAAA 59.990 33.333 0.00 0.00 39.94 2.44
6630 8883 6.475076 CCTGATTTGTTCACGATTTTCACAAA 59.525 34.615 0.00 0.00 40.60 2.83
6631 8884 5.976534 CCTGATTTGTTCACGATTTTCACAA 59.023 36.000 0.00 0.00 0.00 3.33
6632 8885 5.298026 TCCTGATTTGTTCACGATTTTCACA 59.702 36.000 0.00 0.00 0.00 3.58
6633 8886 5.757886 TCCTGATTTGTTCACGATTTTCAC 58.242 37.500 0.00 0.00 0.00 3.18
6634 8887 6.183360 TGTTCCTGATTTGTTCACGATTTTCA 60.183 34.615 0.00 0.00 0.00 2.69
6635 8888 6.205784 TGTTCCTGATTTGTTCACGATTTTC 58.794 36.000 0.00 0.00 0.00 2.29
6636 8889 6.142818 TGTTCCTGATTTGTTCACGATTTT 57.857 33.333 0.00 0.00 0.00 1.82
6637 8890 5.766150 TGTTCCTGATTTGTTCACGATTT 57.234 34.783 0.00 0.00 0.00 2.17
6638 8891 5.964958 ATGTTCCTGATTTGTTCACGATT 57.035 34.783 0.00 0.00 0.00 3.34
6639 8892 5.964958 AATGTTCCTGATTTGTTCACGAT 57.035 34.783 0.00 0.00 0.00 3.73
6640 8893 5.766150 AAATGTTCCTGATTTGTTCACGA 57.234 34.783 0.00 0.00 0.00 4.35
6641 8894 6.697019 AGAAAAATGTTCCTGATTTGTTCACG 59.303 34.615 0.00 0.00 0.00 4.35
6642 8895 9.528018 TTAGAAAAATGTTCCTGATTTGTTCAC 57.472 29.630 0.00 0.00 0.00 3.18
6646 8899 9.750125 GAGTTTAGAAAAATGTTCCTGATTTGT 57.250 29.630 0.00 0.00 0.00 2.83
6647 8900 8.905702 CGAGTTTAGAAAAATGTTCCTGATTTG 58.094 33.333 0.00 0.00 0.00 2.32
6648 8901 8.630037 ACGAGTTTAGAAAAATGTTCCTGATTT 58.370 29.630 0.00 0.00 0.00 2.17
6649 8902 8.076178 CACGAGTTTAGAAAAATGTTCCTGATT 58.924 33.333 0.00 0.00 0.00 2.57
6650 8903 7.444183 TCACGAGTTTAGAAAAATGTTCCTGAT 59.556 33.333 0.00 0.00 0.00 2.90
6651 8904 6.764085 TCACGAGTTTAGAAAAATGTTCCTGA 59.236 34.615 0.00 0.00 0.00 3.86
6652 8905 6.954944 TCACGAGTTTAGAAAAATGTTCCTG 58.045 36.000 0.00 0.00 0.00 3.86
6653 8906 7.066525 TGTTCACGAGTTTAGAAAAATGTTCCT 59.933 33.333 0.00 0.00 0.00 3.36
6654 8907 7.190871 TGTTCACGAGTTTAGAAAAATGTTCC 58.809 34.615 0.00 0.00 0.00 3.62
6655 8908 8.782533 ATGTTCACGAGTTTAGAAAAATGTTC 57.217 30.769 0.00 0.00 0.00 3.18
6660 8913 9.483916 TCAGATATGTTCACGAGTTTAGAAAAA 57.516 29.630 0.00 0.00 0.00 1.94
6661 8914 9.483916 TTCAGATATGTTCACGAGTTTAGAAAA 57.516 29.630 0.00 0.00 0.00 2.29
6662 8915 9.140286 CTTCAGATATGTTCACGAGTTTAGAAA 57.860 33.333 0.00 0.00 0.00 2.52
6663 8916 8.304596 ACTTCAGATATGTTCACGAGTTTAGAA 58.695 33.333 0.00 0.00 0.00 2.10
6664 8917 7.827701 ACTTCAGATATGTTCACGAGTTTAGA 58.172 34.615 0.00 0.00 0.00 2.10
6665 8918 8.376203 CAACTTCAGATATGTTCACGAGTTTAG 58.624 37.037 0.00 0.00 0.00 1.85
6666 8919 7.870954 ACAACTTCAGATATGTTCACGAGTTTA 59.129 33.333 0.00 0.00 0.00 2.01
6667 8920 6.706270 ACAACTTCAGATATGTTCACGAGTTT 59.294 34.615 0.00 0.00 0.00 2.66
6668 8921 6.146184 CACAACTTCAGATATGTTCACGAGTT 59.854 38.462 0.00 0.00 0.00 3.01
6669 8922 5.635280 CACAACTTCAGATATGTTCACGAGT 59.365 40.000 0.00 0.00 0.00 4.18
6670 8923 5.863935 TCACAACTTCAGATATGTTCACGAG 59.136 40.000 0.00 0.00 0.00 4.18
6671 8924 5.778862 TCACAACTTCAGATATGTTCACGA 58.221 37.500 0.00 0.00 0.00 4.35
6672 8925 6.073819 TGTTCACAACTTCAGATATGTTCACG 60.074 38.462 0.00 0.00 0.00 4.35
6673 8926 7.189693 TGTTCACAACTTCAGATATGTTCAC 57.810 36.000 0.00 0.00 0.00 3.18
6674 8927 7.984422 ATGTTCACAACTTCAGATATGTTCA 57.016 32.000 0.00 0.00 0.00 3.18
6675 8928 9.683069 AAAATGTTCACAACTTCAGATATGTTC 57.317 29.630 0.00 0.00 0.00 3.18
6676 8929 9.683069 GAAAATGTTCACAACTTCAGATATGTT 57.317 29.630 0.00 0.00 33.61 2.71
6677 8930 8.849168 TGAAAATGTTCACAACTTCAGATATGT 58.151 29.630 0.00 0.00 38.88 2.29
6678 8931 9.681692 TTGAAAATGTTCACAACTTCAGATATG 57.318 29.630 0.00 0.00 43.52 1.78
6681 8934 9.603921 ATTTTGAAAATGTTCACAACTTCAGAT 57.396 25.926 1.78 4.61 43.52 2.90
6682 8935 9.086336 GATTTTGAAAATGTTCACAACTTCAGA 57.914 29.630 8.03 2.26 43.52 3.27
6683 8936 8.871862 TGATTTTGAAAATGTTCACAACTTCAG 58.128 29.630 8.03 0.00 43.52 3.02
6684 8937 8.768957 TGATTTTGAAAATGTTCACAACTTCA 57.231 26.923 8.03 0.00 43.52 3.02
6685 8938 9.640974 CATGATTTTGAAAATGTTCACAACTTC 57.359 29.630 8.03 0.00 43.52 3.01
6686 8939 9.381033 TCATGATTTTGAAAATGTTCACAACTT 57.619 25.926 8.03 0.00 43.52 2.66
6687 8940 8.945481 TCATGATTTTGAAAATGTTCACAACT 57.055 26.923 8.03 0.00 43.52 3.16
6688 8941 9.424659 GTTCATGATTTTGAAAATGTTCACAAC 57.575 29.630 8.03 4.75 43.52 3.32
6689 8942 9.159364 TGTTCATGATTTTGAAAATGTTCACAA 57.841 25.926 8.03 0.00 43.52 3.33
6690 8943 8.713737 TGTTCATGATTTTGAAAATGTTCACA 57.286 26.923 8.03 0.00 43.52 3.58
6766 9019 9.515020 GAAATGTTTGCCGATTCAAGAAATATA 57.485 29.630 0.00 0.00 0.00 0.86
6767 9020 8.253113 AGAAATGTTTGCCGATTCAAGAAATAT 58.747 29.630 0.00 0.00 0.00 1.28
6768 9021 7.601856 AGAAATGTTTGCCGATTCAAGAAATA 58.398 30.769 0.00 0.00 0.00 1.40
6769 9022 6.458210 AGAAATGTTTGCCGATTCAAGAAAT 58.542 32.000 0.00 0.00 0.00 2.17
6770 9023 5.841810 AGAAATGTTTGCCGATTCAAGAAA 58.158 33.333 0.00 0.00 0.00 2.52
6771 9024 5.452078 AGAAATGTTTGCCGATTCAAGAA 57.548 34.783 0.00 0.00 0.00 2.52
6772 9025 5.937540 TCTAGAAATGTTTGCCGATTCAAGA 59.062 36.000 0.00 0.00 0.00 3.02
6773 9026 6.182039 TCTAGAAATGTTTGCCGATTCAAG 57.818 37.500 0.00 0.00 0.00 3.02
6774 9027 6.567687 TTCTAGAAATGTTTGCCGATTCAA 57.432 33.333 1.68 0.00 0.00 2.69
6775 9028 6.456853 CGATTCTAGAAATGTTTGCCGATTCA 60.457 38.462 9.71 0.00 0.00 2.57
6776 9029 5.904080 CGATTCTAGAAATGTTTGCCGATTC 59.096 40.000 9.71 0.00 0.00 2.52
6777 9030 5.584649 TCGATTCTAGAAATGTTTGCCGATT 59.415 36.000 9.71 0.00 0.00 3.34
6778 9031 5.006746 GTCGATTCTAGAAATGTTTGCCGAT 59.993 40.000 9.71 0.00 0.00 4.18
6779 9032 4.328983 GTCGATTCTAGAAATGTTTGCCGA 59.671 41.667 9.71 6.01 0.00 5.54
6780 9033 4.578601 GTCGATTCTAGAAATGTTTGCCG 58.421 43.478 9.71 3.95 0.00 5.69
6781 9034 4.328983 TCGTCGATTCTAGAAATGTTTGCC 59.671 41.667 9.71 0.00 0.00 4.52
6782 9035 5.450376 TCGTCGATTCTAGAAATGTTTGC 57.550 39.130 9.71 0.00 0.00 3.68
6783 9036 7.050281 AGTTCGTCGATTCTAGAAATGTTTG 57.950 36.000 9.71 0.00 0.00 2.93
6784 9037 7.653767 AAGTTCGTCGATTCTAGAAATGTTT 57.346 32.000 9.71 0.00 0.00 2.83
6785 9038 7.653767 AAAGTTCGTCGATTCTAGAAATGTT 57.346 32.000 9.71 0.00 0.00 2.71
6786 9039 7.653767 AAAAGTTCGTCGATTCTAGAAATGT 57.346 32.000 9.71 0.00 0.00 2.71
6811 9064 8.897752 CCAAAAATTGTTCCACTAATTTCCAAA 58.102 29.630 0.00 0.00 35.94 3.28
6812 9065 8.267894 TCCAAAAATTGTTCCACTAATTTCCAA 58.732 29.630 0.00 0.00 35.94 3.53
6813 9066 7.796054 TCCAAAAATTGTTCCACTAATTTCCA 58.204 30.769 0.00 0.00 35.94 3.53
6814 9067 8.669946 TTCCAAAAATTGTTCCACTAATTTCC 57.330 30.769 0.00 0.00 35.94 3.13
6817 9070 9.844257 TGAATTCCAAAAATTGTTCCACTAATT 57.156 25.926 2.27 0.00 0.00 1.40
6818 9071 9.271828 GTGAATTCCAAAAATTGTTCCACTAAT 57.728 29.630 2.27 0.00 0.00 1.73
6819 9072 7.436673 CGTGAATTCCAAAAATTGTTCCACTAA 59.563 33.333 2.27 0.00 0.00 2.24
6820 9073 6.920758 CGTGAATTCCAAAAATTGTTCCACTA 59.079 34.615 2.27 0.00 0.00 2.74
6821 9074 5.752955 CGTGAATTCCAAAAATTGTTCCACT 59.247 36.000 2.27 0.00 0.00 4.00
6822 9075 5.751028 TCGTGAATTCCAAAAATTGTTCCAC 59.249 36.000 2.27 0.00 0.00 4.02
6823 9076 5.907207 TCGTGAATTCCAAAAATTGTTCCA 58.093 33.333 2.27 0.00 0.00 3.53
6824 9077 6.256757 TGTTCGTGAATTCCAAAAATTGTTCC 59.743 34.615 2.27 0.00 0.00 3.62
6825 9078 7.227992 TGTTCGTGAATTCCAAAAATTGTTC 57.772 32.000 2.27 0.00 0.00 3.18
6826 9079 7.784633 ATGTTCGTGAATTCCAAAAATTGTT 57.215 28.000 2.27 0.00 0.00 2.83
6827 9080 7.784633 AATGTTCGTGAATTCCAAAAATTGT 57.215 28.000 2.27 0.00 0.00 2.71
6828 9081 9.500864 AAAAATGTTCGTGAATTCCAAAAATTG 57.499 25.926 2.27 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.