Multiple sequence alignment - TraesCS2D01G514900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G514900 | chr2D | 100.000 | 2962 | 0 | 0 | 1 | 2962 | 606632354 | 606635315 | 0.000000e+00 | 5470 |
1 | TraesCS2D01G514900 | chr2B | 92.331 | 1630 | 108 | 10 | 1 | 1619 | 738135841 | 738137464 | 0.000000e+00 | 2302 |
2 | TraesCS2D01G514900 | chr2B | 90.190 | 632 | 40 | 13 | 2264 | 2879 | 738137687 | 738138312 | 0.000000e+00 | 804 |
3 | TraesCS2D01G514900 | chr2B | 92.969 | 128 | 6 | 1 | 1669 | 1796 | 738137465 | 738137589 | 1.810000e-42 | 183 |
4 | TraesCS2D01G514900 | chr2A | 93.144 | 773 | 36 | 7 | 1031 | 1796 | 738180351 | 738181113 | 0.000000e+00 | 1118 |
5 | TraesCS2D01G514900 | chr2A | 91.001 | 789 | 53 | 9 | 2178 | 2962 | 738181107 | 738181881 | 0.000000e+00 | 1048 |
6 | TraesCS2D01G514900 | chr2A | 77.399 | 323 | 54 | 14 | 1851 | 2164 | 718105915 | 718106227 | 1.090000e-39 | 174 |
7 | TraesCS2D01G514900 | chr2A | 86.614 | 127 | 9 | 6 | 779 | 901 | 80889814 | 80889692 | 1.850000e-27 | 134 |
8 | TraesCS2D01G514900 | chr3B | 91.228 | 684 | 39 | 4 | 1113 | 1796 | 173246949 | 173247611 | 0.000000e+00 | 911 |
9 | TraesCS2D01G514900 | chr3B | 92.466 | 146 | 7 | 1 | 1607 | 1752 | 173248663 | 173248804 | 3.870000e-49 | 206 |
10 | TraesCS2D01G514900 | chr4A | 92.351 | 353 | 19 | 4 | 1827 | 2174 | 550466202 | 550466551 | 2.050000e-136 | 496 |
11 | TraesCS2D01G514900 | chr3A | 91.389 | 360 | 25 | 3 | 1819 | 2175 | 82877955 | 82878311 | 3.430000e-134 | 488 |
12 | TraesCS2D01G514900 | chr3A | 88.608 | 158 | 12 | 5 | 746 | 901 | 468731254 | 468731101 | 1.400000e-43 | 187 |
13 | TraesCS2D01G514900 | chr3D | 79.379 | 354 | 68 | 5 | 1826 | 2177 | 594972564 | 594972914 | 8.200000e-61 | 244 |
14 | TraesCS2D01G514900 | chr1A | 80.183 | 328 | 58 | 5 | 1851 | 2177 | 29045346 | 29045667 | 3.820000e-59 | 239 |
15 | TraesCS2D01G514900 | chr1A | 93.939 | 66 | 2 | 2 | 757 | 821 | 554011581 | 554011517 | 6.760000e-17 | 99 |
16 | TraesCS2D01G514900 | chr5A | 78.788 | 363 | 55 | 18 | 1837 | 2186 | 581923515 | 581923162 | 1.070000e-54 | 224 |
17 | TraesCS2D01G514900 | chr5A | 86.275 | 153 | 15 | 6 | 754 | 901 | 599644612 | 599644763 | 8.500000e-36 | 161 |
18 | TraesCS2D01G514900 | chr5B | 77.429 | 350 | 56 | 17 | 1826 | 2164 | 471858457 | 471858120 | 1.400000e-43 | 187 |
19 | TraesCS2D01G514900 | chr7A | 77.329 | 322 | 56 | 11 | 1851 | 2164 | 654781881 | 654782193 | 1.090000e-39 | 174 |
20 | TraesCS2D01G514900 | chr6D | 77.090 | 323 | 55 | 14 | 1851 | 2164 | 463861687 | 463861999 | 5.080000e-38 | 169 |
21 | TraesCS2D01G514900 | chr6D | 88.652 | 141 | 11 | 4 | 727 | 863 | 363008938 | 363009077 | 1.830000e-37 | 167 |
22 | TraesCS2D01G514900 | chr5D | 79.866 | 149 | 21 | 8 | 223 | 366 | 380486905 | 380487049 | 1.880000e-17 | 100 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G514900 | chr2D | 606632354 | 606635315 | 2961 | False | 5470.000000 | 5470 | 100.0000 | 1 | 2962 | 1 | chr2D.!!$F1 | 2961 |
1 | TraesCS2D01G514900 | chr2B | 738135841 | 738138312 | 2471 | False | 1096.333333 | 2302 | 91.8300 | 1 | 2879 | 3 | chr2B.!!$F1 | 2878 |
2 | TraesCS2D01G514900 | chr2A | 738180351 | 738181881 | 1530 | False | 1083.000000 | 1118 | 92.0725 | 1031 | 2962 | 2 | chr2A.!!$F2 | 1931 |
3 | TraesCS2D01G514900 | chr3B | 173246949 | 173248804 | 1855 | False | 558.500000 | 911 | 91.8470 | 1113 | 1796 | 2 | chr3B.!!$F1 | 683 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
748 | 759 | 0.032416 | ACAGCTACATCTACGGGGGT | 60.032 | 55.0 | 0.0 | 0.0 | 0.0 | 4.95 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2149 | 2170 | 0.038599 | TGTGGCTACTCTCGGGTGTA | 59.961 | 55.0 | 0.64 | 0.0 | 0.0 | 2.9 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
25 | 26 | 5.064707 | ACGACAATATAACGCTTTTGCTGAT | 59.935 | 36.000 | 0.00 | 0.00 | 44.80 | 2.90 |
27 | 28 | 6.435430 | ACAATATAACGCTTTTGCTGATCA | 57.565 | 33.333 | 0.00 | 0.00 | 44.80 | 2.92 |
31 | 32 | 2.642139 | ACGCTTTTGCTGATCAATGG | 57.358 | 45.000 | 0.00 | 0.00 | 44.80 | 3.16 |
34 | 35 | 2.690786 | GCTTTTGCTGATCAATGGCAA | 58.309 | 42.857 | 14.82 | 14.82 | 42.97 | 4.52 |
52 | 53 | 4.142513 | TGGCAATTTTTGTTTGGTGCTTTC | 60.143 | 37.500 | 0.00 | 0.00 | 0.00 | 2.62 |
63 | 64 | 5.752955 | TGTTTGGTGCTTTCTTATTTTGAGC | 59.247 | 36.000 | 0.00 | 0.00 | 0.00 | 4.26 |
88 | 89 | 8.853345 | GCATCATGAAAATTAGTTTGTGTGTAG | 58.147 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
99 | 100 | 4.279169 | AGTTTGTGTGTAGCATGCTGATTT | 59.721 | 37.500 | 30.42 | 5.99 | 0.00 | 2.17 |
115 | 116 | 6.228995 | TGCTGATTTTACATCATTTTTGGCA | 58.771 | 32.000 | 0.00 | 0.00 | 0.00 | 4.92 |
227 | 232 | 0.521291 | CGTGTCCATCGTGGCAAATT | 59.479 | 50.000 | 0.00 | 0.00 | 37.47 | 1.82 |
280 | 285 | 9.209175 | ACTTTATTGATCTCTCGCCATTAATAC | 57.791 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
316 | 321 | 7.148086 | GGACCTTGGCAATTTTTCTTTCTTTTT | 60.148 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
341 | 346 | 6.989169 | TGCAACATGGCAAACTTACTATTTTT | 59.011 | 30.769 | 0.00 | 0.00 | 41.65 | 1.94 |
384 | 389 | 8.815565 | TTTAGTTCAGGTTCATGGCATATTTA | 57.184 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
389 | 394 | 9.034544 | GTTCAGGTTCATGGCATATTTATTTTC | 57.965 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
393 | 398 | 8.761689 | AGGTTCATGGCATATTTATTTTCTGTT | 58.238 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
465 | 471 | 7.667043 | TTCTGTGCTTTTCATTTACGTCTAT | 57.333 | 32.000 | 0.00 | 0.00 | 0.00 | 1.98 |
466 | 472 | 7.667043 | TCTGTGCTTTTCATTTACGTCTATT | 57.333 | 32.000 | 0.00 | 0.00 | 0.00 | 1.73 |
467 | 473 | 7.518161 | TCTGTGCTTTTCATTTACGTCTATTG | 58.482 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
483 | 489 | 2.242882 | ATTGAAGAGGCCCAGCAAAT | 57.757 | 45.000 | 0.00 | 0.00 | 0.00 | 2.32 |
497 | 503 | 1.272212 | AGCAAATTGGGTTGTTAGGCG | 59.728 | 47.619 | 0.00 | 0.00 | 0.00 | 5.52 |
509 | 515 | 4.933400 | GGTTGTTAGGCGTTTTCTAGATCA | 59.067 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
514 | 522 | 1.261619 | GGCGTTTTCTAGATCATGCCG | 59.738 | 52.381 | 15.71 | 5.23 | 0.00 | 5.69 |
630 | 638 | 4.778143 | CGTTCTGGCCCTTCCCCG | 62.778 | 72.222 | 0.00 | 0.00 | 0.00 | 5.73 |
638 | 646 | 4.091939 | CCCTTCCCCGGACCGAAC | 62.092 | 72.222 | 17.49 | 0.00 | 0.00 | 3.95 |
639 | 647 | 4.446413 | CCTTCCCCGGACCGAACG | 62.446 | 72.222 | 17.49 | 1.63 | 0.00 | 3.95 |
640 | 648 | 3.688159 | CTTCCCCGGACCGAACGT | 61.688 | 66.667 | 17.49 | 0.00 | 0.00 | 3.99 |
641 | 649 | 3.230522 | CTTCCCCGGACCGAACGTT | 62.231 | 63.158 | 17.49 | 0.00 | 0.00 | 3.99 |
730 | 741 | 4.718858 | TGTGTGTATTGTTAACGAGCAC | 57.281 | 40.909 | 18.91 | 18.91 | 0.00 | 4.40 |
731 | 742 | 4.120589 | TGTGTGTATTGTTAACGAGCACA | 58.879 | 39.130 | 22.14 | 22.14 | 33.71 | 4.57 |
739 | 750 | 3.250744 | TGTTAACGAGCACAGCTACATC | 58.749 | 45.455 | 0.26 | 0.00 | 39.88 | 3.06 |
742 | 753 | 2.853731 | ACGAGCACAGCTACATCTAC | 57.146 | 50.000 | 0.00 | 0.00 | 39.88 | 2.59 |
748 | 759 | 0.032416 | ACAGCTACATCTACGGGGGT | 60.032 | 55.000 | 0.00 | 0.00 | 0.00 | 4.95 |
752 | 763 | 2.093128 | AGCTACATCTACGGGGGTTTTG | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
755 | 766 | 1.005450 | ACATCTACGGGGGTTTTGCAT | 59.995 | 47.619 | 0.00 | 0.00 | 0.00 | 3.96 |
759 | 770 | 0.402504 | TACGGGGGTTTTGCATGAGT | 59.597 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
783 | 794 | 3.483869 | GGCTAGGCTGAGGTGGGG | 61.484 | 72.222 | 9.46 | 0.00 | 0.00 | 4.96 |
787 | 798 | 0.325296 | CTAGGCTGAGGTGGGGTGTA | 60.325 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
795 | 806 | 2.025416 | TGAGGTGGGGTGTATTGATTGG | 60.025 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
809 | 820 | 9.906660 | GTGTATTGATTGGTTGTTAAGATGAAA | 57.093 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
814 | 825 | 4.839668 | TGGTTGTTAAGATGAAAACGGG | 57.160 | 40.909 | 0.00 | 0.00 | 0.00 | 5.28 |
819 | 830 | 1.828979 | TAAGATGAAAACGGGCCCAC | 58.171 | 50.000 | 24.92 | 7.77 | 0.00 | 4.61 |
864 | 875 | 3.277416 | AGTGAGGGGAGAAGGTTAGTT | 57.723 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
921 | 932 | 2.073816 | GTGTGTATCGTTTGACCTGGG | 58.926 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
958 | 969 | 8.275015 | ACGAAATGACACAATGATAACCAATA | 57.725 | 30.769 | 0.00 | 0.00 | 0.00 | 1.90 |
960 | 971 | 7.643764 | CGAAATGACACAATGATAACCAATACC | 59.356 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
991 | 1002 | 4.347453 | GCAGTGCAAGGCAACCGG | 62.347 | 66.667 | 11.09 | 0.00 | 41.47 | 5.28 |
1008 | 1019 | 1.296056 | CGGCCTTACCACACTTTCCG | 61.296 | 60.000 | 0.00 | 0.00 | 39.03 | 4.30 |
1021 | 1032 | 5.390885 | CCACACTTTCCGTGAATGTAGATTG | 60.391 | 44.000 | 0.00 | 0.00 | 46.81 | 2.67 |
1037 | 1048 | 7.812690 | TGTAGATTGCATTGCTTGATCTAAT | 57.187 | 32.000 | 20.86 | 8.80 | 32.44 | 1.73 |
1055 | 1066 | 2.260316 | ATAACCTAGACCCCCGCCCA | 62.260 | 60.000 | 0.00 | 0.00 | 0.00 | 5.36 |
1128 | 1145 | 1.228800 | AGGAGGGTTCGTCGAAGGT | 60.229 | 57.895 | 8.18 | 0.00 | 0.00 | 3.50 |
1294 | 1311 | 1.139058 | GTCCGCATCACCAGGAGTAAT | 59.861 | 52.381 | 0.00 | 0.00 | 34.29 | 1.89 |
1411 | 1431 | 1.004918 | CGCCCGGGATCAGGATAAC | 60.005 | 63.158 | 29.31 | 0.00 | 0.00 | 1.89 |
1531 | 1551 | 2.582498 | GAGGCGCGCGTGACTTAT | 60.582 | 61.111 | 31.36 | 7.66 | 0.00 | 1.73 |
1561 | 1581 | 1.538075 | GAGCGTTTCCCGAAATTCCAA | 59.462 | 47.619 | 0.00 | 0.00 | 39.56 | 3.53 |
1588 | 1608 | 1.080093 | CCGCAGCGAGTACCTCAAA | 60.080 | 57.895 | 18.75 | 0.00 | 0.00 | 2.69 |
1626 | 1646 | 3.676291 | TGACAATGACATCCTCGTTGA | 57.324 | 42.857 | 8.86 | 0.00 | 45.54 | 3.18 |
1661 | 1681 | 0.106967 | GGCATGGGAGGAGGAACTTC | 60.107 | 60.000 | 0.00 | 0.00 | 41.55 | 3.01 |
1692 | 1713 | 7.824779 | AGACTTAGACGCAGGAAGAATTTAATT | 59.175 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
1733 | 1754 | 6.036191 | CCATGCATGAGATAGAAAGATCATCG | 59.964 | 42.308 | 28.31 | 0.38 | 30.09 | 3.84 |
1753 | 1774 | 2.094182 | CGTACCTGTGTTAGCCATCTGT | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1773 | 1794 | 6.175471 | TCTGTCTGTGATGATGCAGTTTAAT | 58.825 | 36.000 | 0.00 | 0.00 | 34.57 | 1.40 |
1775 | 1796 | 7.175467 | TCTGTCTGTGATGATGCAGTTTAATTT | 59.825 | 33.333 | 0.00 | 0.00 | 34.57 | 1.82 |
1776 | 1797 | 7.660112 | TGTCTGTGATGATGCAGTTTAATTTT | 58.340 | 30.769 | 0.00 | 0.00 | 34.57 | 1.82 |
1777 | 1798 | 8.791675 | TGTCTGTGATGATGCAGTTTAATTTTA | 58.208 | 29.630 | 0.00 | 0.00 | 34.57 | 1.52 |
1799 | 1820 | 8.568676 | TTTATTATCCATGGTGTTTCTTTCGA | 57.431 | 30.769 | 12.58 | 0.00 | 0.00 | 3.71 |
1800 | 1821 | 6.683974 | ATTATCCATGGTGTTTCTTTCGAG | 57.316 | 37.500 | 12.58 | 0.00 | 0.00 | 4.04 |
1801 | 1822 | 3.762407 | TCCATGGTGTTTCTTTCGAGA | 57.238 | 42.857 | 12.58 | 0.00 | 0.00 | 4.04 |
1802 | 1823 | 3.399330 | TCCATGGTGTTTCTTTCGAGAC | 58.601 | 45.455 | 12.58 | 0.00 | 0.00 | 3.36 |
1803 | 1824 | 3.071023 | TCCATGGTGTTTCTTTCGAGACT | 59.929 | 43.478 | 12.58 | 0.00 | 0.00 | 3.24 |
1804 | 1825 | 3.187227 | CCATGGTGTTTCTTTCGAGACTG | 59.813 | 47.826 | 2.57 | 0.00 | 0.00 | 3.51 |
1805 | 1826 | 2.833794 | TGGTGTTTCTTTCGAGACTGG | 58.166 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
1806 | 1827 | 2.432874 | TGGTGTTTCTTTCGAGACTGGA | 59.567 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
1807 | 1828 | 3.071023 | TGGTGTTTCTTTCGAGACTGGAT | 59.929 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
1808 | 1829 | 4.065789 | GGTGTTTCTTTCGAGACTGGATT | 58.934 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
1809 | 1830 | 4.515567 | GGTGTTTCTTTCGAGACTGGATTT | 59.484 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
1810 | 1831 | 5.008712 | GGTGTTTCTTTCGAGACTGGATTTT | 59.991 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
1811 | 1832 | 6.204108 | GGTGTTTCTTTCGAGACTGGATTTTA | 59.796 | 38.462 | 0.00 | 0.00 | 0.00 | 1.52 |
1812 | 1833 | 7.094762 | GGTGTTTCTTTCGAGACTGGATTTTAT | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
1813 | 1834 | 8.932791 | GTGTTTCTTTCGAGACTGGATTTTATA | 58.067 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
1814 | 1835 | 8.932791 | TGTTTCTTTCGAGACTGGATTTTATAC | 58.067 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
1815 | 1836 | 9.152595 | GTTTCTTTCGAGACTGGATTTTATACT | 57.847 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
1816 | 1837 | 8.703604 | TTCTTTCGAGACTGGATTTTATACTG | 57.296 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
1817 | 1838 | 7.837863 | TCTTTCGAGACTGGATTTTATACTGT | 58.162 | 34.615 | 0.00 | 0.00 | 0.00 | 3.55 |
1818 | 1839 | 8.963725 | TCTTTCGAGACTGGATTTTATACTGTA | 58.036 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
1819 | 1840 | 9.582431 | CTTTCGAGACTGGATTTTATACTGTAA | 57.418 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
1820 | 1841 | 8.922058 | TTCGAGACTGGATTTTATACTGTAAC | 57.078 | 34.615 | 0.00 | 0.00 | 0.00 | 2.50 |
1821 | 1842 | 8.289939 | TCGAGACTGGATTTTATACTGTAACT | 57.710 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
1822 | 1843 | 8.746530 | TCGAGACTGGATTTTATACTGTAACTT | 58.253 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
1823 | 1844 | 9.367444 | CGAGACTGGATTTTATACTGTAACTTT | 57.633 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
1825 | 1846 | 9.449719 | AGACTGGATTTTATACTGTAACTTTGG | 57.550 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
1826 | 1847 | 9.444600 | GACTGGATTTTATACTGTAACTTTGGA | 57.555 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
1827 | 1848 | 9.802039 | ACTGGATTTTATACTGTAACTTTGGAA | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 3.53 |
1862 | 1883 | 8.000285 | TCGAACTAACTCGAAAAATCTGTAAC | 58.000 | 34.615 | 0.00 | 0.00 | 44.49 | 2.50 |
1863 | 1884 | 7.864379 | TCGAACTAACTCGAAAAATCTGTAACT | 59.136 | 33.333 | 0.00 | 0.00 | 44.49 | 2.24 |
1864 | 1885 | 8.485591 | CGAACTAACTCGAAAAATCTGTAACTT | 58.514 | 33.333 | 0.00 | 0.00 | 41.44 | 2.66 |
1866 | 1887 | 9.931210 | AACTAACTCGAAAAATCTGTAACTTTG | 57.069 | 29.630 | 0.00 | 0.00 | 0.00 | 2.77 |
1867 | 1888 | 9.321562 | ACTAACTCGAAAAATCTGTAACTTTGA | 57.678 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
1868 | 1889 | 9.798885 | CTAACTCGAAAAATCTGTAACTTTGAG | 57.201 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
1869 | 1890 | 8.433421 | AACTCGAAAAATCTGTAACTTTGAGA | 57.567 | 30.769 | 4.73 | 0.00 | 0.00 | 3.27 |
1870 | 1891 | 7.852516 | ACTCGAAAAATCTGTAACTTTGAGAC | 58.147 | 34.615 | 4.73 | 0.00 | 0.00 | 3.36 |
1871 | 1892 | 7.494625 | ACTCGAAAAATCTGTAACTTTGAGACA | 59.505 | 33.333 | 4.73 | 0.00 | 0.00 | 3.41 |
1872 | 1893 | 8.378172 | TCGAAAAATCTGTAACTTTGAGACAT | 57.622 | 30.769 | 0.00 | 0.00 | 0.00 | 3.06 |
1873 | 1894 | 8.495949 | TCGAAAAATCTGTAACTTTGAGACATC | 58.504 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
1874 | 1895 | 8.282592 | CGAAAAATCTGTAACTTTGAGACATCA | 58.717 | 33.333 | 0.00 | 0.00 | 0.00 | 3.07 |
1875 | 1896 | 9.950680 | GAAAAATCTGTAACTTTGAGACATCAA | 57.049 | 29.630 | 0.00 | 0.00 | 43.72 | 2.57 |
1889 | 1910 | 7.514784 | TGAGACATCAAACTTGATCAAATGT | 57.485 | 32.000 | 18.25 | 18.25 | 45.62 | 2.71 |
1890 | 1911 | 7.944061 | TGAGACATCAAACTTGATCAAATGTT | 58.056 | 30.769 | 18.90 | 13.51 | 45.62 | 2.71 |
1891 | 1912 | 8.077991 | TGAGACATCAAACTTGATCAAATGTTC | 58.922 | 33.333 | 18.90 | 17.17 | 45.62 | 3.18 |
1892 | 1913 | 7.080099 | AGACATCAAACTTGATCAAATGTTCG | 58.920 | 34.615 | 18.90 | 7.81 | 45.62 | 3.95 |
1893 | 1914 | 6.969366 | ACATCAAACTTGATCAAATGTTCGA | 58.031 | 32.000 | 14.25 | 9.41 | 45.62 | 3.71 |
1894 | 1915 | 7.080099 | ACATCAAACTTGATCAAATGTTCGAG | 58.920 | 34.615 | 14.25 | 8.27 | 45.62 | 4.04 |
1895 | 1916 | 5.451908 | TCAAACTTGATCAAATGTTCGAGC | 58.548 | 37.500 | 9.88 | 0.00 | 31.46 | 5.03 |
1896 | 1917 | 5.239306 | TCAAACTTGATCAAATGTTCGAGCT | 59.761 | 36.000 | 9.88 | 0.00 | 31.46 | 4.09 |
1897 | 1918 | 6.426633 | TCAAACTTGATCAAATGTTCGAGCTA | 59.573 | 34.615 | 9.88 | 0.00 | 31.46 | 3.32 |
1898 | 1919 | 6.801539 | AACTTGATCAAATGTTCGAGCTAA | 57.198 | 33.333 | 9.88 | 0.00 | 31.46 | 3.09 |
1899 | 1920 | 6.170675 | ACTTGATCAAATGTTCGAGCTAAC | 57.829 | 37.500 | 9.88 | 0.00 | 31.46 | 2.34 |
1900 | 1921 | 5.934625 | ACTTGATCAAATGTTCGAGCTAACT | 59.065 | 36.000 | 9.88 | 0.00 | 31.46 | 2.24 |
1901 | 1922 | 5.784750 | TGATCAAATGTTCGAGCTAACTG | 57.215 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
1902 | 1923 | 4.631377 | TGATCAAATGTTCGAGCTAACTGG | 59.369 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
1903 | 1924 | 2.742053 | TCAAATGTTCGAGCTAACTGGC | 59.258 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
1904 | 1925 | 2.472695 | AATGTTCGAGCTAACTGGCA | 57.527 | 45.000 | 0.00 | 0.00 | 34.17 | 4.92 |
1905 | 1926 | 2.472695 | ATGTTCGAGCTAACTGGCAA | 57.527 | 45.000 | 0.00 | 0.00 | 34.17 | 4.52 |
1906 | 1927 | 2.248280 | TGTTCGAGCTAACTGGCAAA | 57.752 | 45.000 | 0.00 | 0.00 | 34.17 | 3.68 |
1907 | 1928 | 2.778299 | TGTTCGAGCTAACTGGCAAAT | 58.222 | 42.857 | 0.00 | 0.00 | 34.17 | 2.32 |
1908 | 1929 | 2.483877 | TGTTCGAGCTAACTGGCAAATG | 59.516 | 45.455 | 0.00 | 0.00 | 34.17 | 2.32 |
1909 | 1930 | 2.472695 | TCGAGCTAACTGGCAAATGT | 57.527 | 45.000 | 0.00 | 0.00 | 34.17 | 2.71 |
1910 | 1931 | 2.346803 | TCGAGCTAACTGGCAAATGTC | 58.653 | 47.619 | 0.00 | 0.00 | 34.17 | 3.06 |
1911 | 1932 | 2.076100 | CGAGCTAACTGGCAAATGTCA | 58.924 | 47.619 | 0.00 | 0.00 | 34.17 | 3.58 |
1921 | 1942 | 2.798976 | GCAAATGTCAGCCAGAAACA | 57.201 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
1922 | 1943 | 3.096489 | GCAAATGTCAGCCAGAAACAA | 57.904 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
1923 | 1944 | 2.796593 | GCAAATGTCAGCCAGAAACAAC | 59.203 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
1924 | 1945 | 3.737663 | GCAAATGTCAGCCAGAAACAACA | 60.738 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
1925 | 1946 | 4.624015 | CAAATGTCAGCCAGAAACAACAT | 58.376 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
1926 | 1947 | 4.510038 | AATGTCAGCCAGAAACAACATC | 57.490 | 40.909 | 0.00 | 0.00 | 0.00 | 3.06 |
1927 | 1948 | 2.929641 | TGTCAGCCAGAAACAACATCA | 58.070 | 42.857 | 0.00 | 0.00 | 0.00 | 3.07 |
1928 | 1949 | 2.880268 | TGTCAGCCAGAAACAACATCAG | 59.120 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
1929 | 1950 | 3.141398 | GTCAGCCAGAAACAACATCAGA | 58.859 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
1930 | 1951 | 3.188048 | GTCAGCCAGAAACAACATCAGAG | 59.812 | 47.826 | 0.00 | 0.00 | 0.00 | 3.35 |
1931 | 1952 | 2.486982 | CAGCCAGAAACAACATCAGAGG | 59.513 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1932 | 1953 | 2.373169 | AGCCAGAAACAACATCAGAGGA | 59.627 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
1933 | 1954 | 2.746362 | GCCAGAAACAACATCAGAGGAG | 59.254 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1934 | 1955 | 2.746362 | CCAGAAACAACATCAGAGGAGC | 59.254 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1935 | 1956 | 3.558746 | CCAGAAACAACATCAGAGGAGCT | 60.559 | 47.826 | 0.00 | 0.00 | 0.00 | 4.09 |
1936 | 1957 | 3.683822 | CAGAAACAACATCAGAGGAGCTC | 59.316 | 47.826 | 4.71 | 4.71 | 0.00 | 4.09 |
1937 | 1958 | 3.582208 | AGAAACAACATCAGAGGAGCTCT | 59.418 | 43.478 | 14.64 | 0.00 | 42.11 | 4.09 |
1938 | 1959 | 3.608316 | AACAACATCAGAGGAGCTCTC | 57.392 | 47.619 | 14.64 | 9.23 | 38.99 | 3.20 |
1939 | 1960 | 2.533916 | ACAACATCAGAGGAGCTCTCA | 58.466 | 47.619 | 14.64 | 0.00 | 44.81 | 3.27 |
1940 | 1961 | 2.233431 | ACAACATCAGAGGAGCTCTCAC | 59.767 | 50.000 | 14.64 | 5.51 | 44.81 | 3.51 |
1941 | 1962 | 1.484038 | ACATCAGAGGAGCTCTCACC | 58.516 | 55.000 | 14.64 | 0.00 | 44.81 | 4.02 |
1942 | 1963 | 1.272928 | ACATCAGAGGAGCTCTCACCA | 60.273 | 52.381 | 14.64 | 0.00 | 44.81 | 4.17 |
1943 | 1964 | 1.829849 | CATCAGAGGAGCTCTCACCAA | 59.170 | 52.381 | 14.64 | 0.00 | 44.81 | 3.67 |
1944 | 1965 | 2.015456 | TCAGAGGAGCTCTCACCAAA | 57.985 | 50.000 | 14.64 | 0.00 | 44.81 | 3.28 |
1945 | 1966 | 2.329267 | TCAGAGGAGCTCTCACCAAAA | 58.671 | 47.619 | 14.64 | 0.00 | 44.81 | 2.44 |
1946 | 1967 | 2.705658 | TCAGAGGAGCTCTCACCAAAAA | 59.294 | 45.455 | 14.64 | 0.00 | 44.81 | 1.94 |
1973 | 1994 | 9.657419 | AGACAAAATCAATCTTCAAAGTTTTGT | 57.343 | 25.926 | 15.34 | 15.34 | 45.46 | 2.83 |
1974 | 1995 | 9.693157 | GACAAAATCAATCTTCAAAGTTTTGTG | 57.307 | 29.630 | 18.20 | 8.84 | 43.89 | 3.33 |
1975 | 1996 | 8.177013 | ACAAAATCAATCTTCAAAGTTTTGTGC | 58.823 | 29.630 | 14.94 | 0.00 | 42.92 | 4.57 |
1976 | 1997 | 7.846644 | AAATCAATCTTCAAAGTTTTGTGCA | 57.153 | 28.000 | 4.67 | 0.00 | 39.18 | 4.57 |
1977 | 1998 | 6.833342 | ATCAATCTTCAAAGTTTTGTGCAC | 57.167 | 33.333 | 10.75 | 10.75 | 39.18 | 4.57 |
1978 | 1999 | 5.964758 | TCAATCTTCAAAGTTTTGTGCACT | 58.035 | 33.333 | 19.41 | 0.00 | 39.18 | 4.40 |
1979 | 2000 | 5.806502 | TCAATCTTCAAAGTTTTGTGCACTG | 59.193 | 36.000 | 19.41 | 6.01 | 39.18 | 3.66 |
1980 | 2001 | 4.782019 | TCTTCAAAGTTTTGTGCACTGT | 57.218 | 36.364 | 19.41 | 0.00 | 39.18 | 3.55 |
1981 | 2002 | 5.132897 | TCTTCAAAGTTTTGTGCACTGTT | 57.867 | 34.783 | 19.41 | 1.28 | 39.18 | 3.16 |
1982 | 2003 | 5.537188 | TCTTCAAAGTTTTGTGCACTGTTT | 58.463 | 33.333 | 19.41 | 7.42 | 39.18 | 2.83 |
1983 | 2004 | 5.404968 | TCTTCAAAGTTTTGTGCACTGTTTG | 59.595 | 36.000 | 19.41 | 17.71 | 39.18 | 2.93 |
1984 | 2005 | 4.876125 | TCAAAGTTTTGTGCACTGTTTGA | 58.124 | 34.783 | 19.41 | 19.41 | 39.18 | 2.69 |
1985 | 2006 | 4.922692 | TCAAAGTTTTGTGCACTGTTTGAG | 59.077 | 37.500 | 19.41 | 2.35 | 39.18 | 3.02 |
1986 | 2007 | 4.782019 | AAGTTTTGTGCACTGTTTGAGA | 57.218 | 36.364 | 19.41 | 0.00 | 0.00 | 3.27 |
1987 | 2008 | 4.782019 | AGTTTTGTGCACTGTTTGAGAA | 57.218 | 36.364 | 19.41 | 0.00 | 0.00 | 2.87 |
1988 | 2009 | 4.737054 | AGTTTTGTGCACTGTTTGAGAAG | 58.263 | 39.130 | 19.41 | 0.00 | 0.00 | 2.85 |
1989 | 2010 | 4.218417 | AGTTTTGTGCACTGTTTGAGAAGT | 59.782 | 37.500 | 19.41 | 0.00 | 0.00 | 3.01 |
1990 | 2011 | 3.763097 | TTGTGCACTGTTTGAGAAGTG | 57.237 | 42.857 | 19.41 | 0.00 | 45.37 | 3.16 |
1991 | 2012 | 2.984562 | TGTGCACTGTTTGAGAAGTGA | 58.015 | 42.857 | 19.41 | 0.00 | 45.43 | 3.41 |
1992 | 2013 | 3.544684 | TGTGCACTGTTTGAGAAGTGAT | 58.455 | 40.909 | 19.41 | 0.00 | 45.43 | 3.06 |
1993 | 2014 | 3.947196 | TGTGCACTGTTTGAGAAGTGATT | 59.053 | 39.130 | 19.41 | 0.00 | 45.43 | 2.57 |
1994 | 2015 | 4.398988 | TGTGCACTGTTTGAGAAGTGATTT | 59.601 | 37.500 | 19.41 | 0.00 | 45.43 | 2.17 |
1995 | 2016 | 5.105797 | TGTGCACTGTTTGAGAAGTGATTTT | 60.106 | 36.000 | 19.41 | 0.00 | 45.43 | 1.82 |
1996 | 2017 | 5.230726 | GTGCACTGTTTGAGAAGTGATTTTG | 59.769 | 40.000 | 10.32 | 0.00 | 45.43 | 2.44 |
1997 | 2018 | 5.105797 | TGCACTGTTTGAGAAGTGATTTTGT | 60.106 | 36.000 | 6.98 | 0.00 | 45.43 | 2.83 |
1998 | 2019 | 5.807011 | GCACTGTTTGAGAAGTGATTTTGTT | 59.193 | 36.000 | 6.98 | 0.00 | 45.43 | 2.83 |
1999 | 2020 | 6.311200 | GCACTGTTTGAGAAGTGATTTTGTTT | 59.689 | 34.615 | 6.98 | 0.00 | 45.43 | 2.83 |
2000 | 2021 | 7.148590 | GCACTGTTTGAGAAGTGATTTTGTTTT | 60.149 | 33.333 | 6.98 | 0.00 | 45.43 | 2.43 |
2001 | 2022 | 8.711457 | CACTGTTTGAGAAGTGATTTTGTTTTT | 58.289 | 29.630 | 0.00 | 0.00 | 45.43 | 1.94 |
2031 | 2052 | 5.946942 | TGAGAGCTCCTCATATGTTTTCT | 57.053 | 39.130 | 10.93 | 0.00 | 46.38 | 2.52 |
2032 | 2053 | 6.305272 | TGAGAGCTCCTCATATGTTTTCTT | 57.695 | 37.500 | 10.93 | 0.00 | 46.38 | 2.52 |
2033 | 2054 | 6.715280 | TGAGAGCTCCTCATATGTTTTCTTT | 58.285 | 36.000 | 10.93 | 0.00 | 46.38 | 2.52 |
2034 | 2055 | 6.596888 | TGAGAGCTCCTCATATGTTTTCTTTG | 59.403 | 38.462 | 10.93 | 0.00 | 46.38 | 2.77 |
2035 | 2056 | 5.884792 | AGAGCTCCTCATATGTTTTCTTTGG | 59.115 | 40.000 | 10.93 | 0.00 | 32.06 | 3.28 |
2036 | 2057 | 4.400567 | AGCTCCTCATATGTTTTCTTTGGC | 59.599 | 41.667 | 1.90 | 0.00 | 0.00 | 4.52 |
2037 | 2058 | 4.400567 | GCTCCTCATATGTTTTCTTTGGCT | 59.599 | 41.667 | 1.90 | 0.00 | 0.00 | 4.75 |
2038 | 2059 | 5.678107 | GCTCCTCATATGTTTTCTTTGGCTG | 60.678 | 44.000 | 1.90 | 0.00 | 0.00 | 4.85 |
2039 | 2060 | 5.569355 | TCCTCATATGTTTTCTTTGGCTGA | 58.431 | 37.500 | 1.90 | 0.00 | 0.00 | 4.26 |
2040 | 2061 | 6.009589 | TCCTCATATGTTTTCTTTGGCTGAA | 58.990 | 36.000 | 1.90 | 0.00 | 0.00 | 3.02 |
2041 | 2062 | 6.493115 | TCCTCATATGTTTTCTTTGGCTGAAA | 59.507 | 34.615 | 1.90 | 0.00 | 0.00 | 2.69 |
2042 | 2063 | 7.178983 | TCCTCATATGTTTTCTTTGGCTGAAAT | 59.821 | 33.333 | 1.90 | 0.00 | 34.04 | 2.17 |
2043 | 2064 | 7.820872 | CCTCATATGTTTTCTTTGGCTGAAATT | 59.179 | 33.333 | 1.90 | 0.00 | 34.04 | 1.82 |
2044 | 2065 | 9.211485 | CTCATATGTTTTCTTTGGCTGAAATTT | 57.789 | 29.630 | 1.90 | 0.00 | 34.04 | 1.82 |
2045 | 2066 | 9.558396 | TCATATGTTTTCTTTGGCTGAAATTTT | 57.442 | 25.926 | 1.90 | 0.00 | 34.04 | 1.82 |
2046 | 2067 | 9.601971 | CATATGTTTTCTTTGGCTGAAATTTTG | 57.398 | 29.630 | 0.00 | 0.00 | 34.04 | 2.44 |
2047 | 2068 | 5.878133 | TGTTTTCTTTGGCTGAAATTTTGC | 58.122 | 33.333 | 8.13 | 8.13 | 34.04 | 3.68 |
2048 | 2069 | 5.413833 | TGTTTTCTTTGGCTGAAATTTTGCA | 59.586 | 32.000 | 15.61 | 0.00 | 34.04 | 4.08 |
2049 | 2070 | 5.738118 | TTTCTTTGGCTGAAATTTTGCAG | 57.262 | 34.783 | 15.61 | 9.97 | 35.28 | 4.41 |
2050 | 2071 | 3.731089 | TCTTTGGCTGAAATTTTGCAGG | 58.269 | 40.909 | 15.61 | 5.88 | 32.83 | 4.85 |
2051 | 2072 | 3.387374 | TCTTTGGCTGAAATTTTGCAGGA | 59.613 | 39.130 | 15.61 | 7.47 | 32.83 | 3.86 |
2052 | 2073 | 3.834489 | TTGGCTGAAATTTTGCAGGAA | 57.166 | 38.095 | 15.61 | 5.80 | 32.83 | 3.36 |
2053 | 2074 | 3.389925 | TGGCTGAAATTTTGCAGGAAG | 57.610 | 42.857 | 15.61 | 0.00 | 32.83 | 3.46 |
2054 | 2075 | 2.071540 | GGCTGAAATTTTGCAGGAAGC | 58.928 | 47.619 | 15.61 | 6.89 | 45.96 | 3.86 |
2055 | 2076 | 2.289257 | GGCTGAAATTTTGCAGGAAGCT | 60.289 | 45.455 | 15.61 | 0.00 | 45.94 | 3.74 |
2056 | 2077 | 2.991866 | GCTGAAATTTTGCAGGAAGCTC | 59.008 | 45.455 | 8.50 | 0.00 | 45.94 | 4.09 |
2057 | 2078 | 3.553508 | GCTGAAATTTTGCAGGAAGCTCA | 60.554 | 43.478 | 8.50 | 0.00 | 45.94 | 4.26 |
2058 | 2079 | 4.624015 | CTGAAATTTTGCAGGAAGCTCAA | 58.376 | 39.130 | 0.00 | 0.00 | 45.94 | 3.02 |
2059 | 2080 | 5.021033 | TGAAATTTTGCAGGAAGCTCAAA | 57.979 | 34.783 | 0.00 | 0.00 | 45.94 | 2.69 |
2060 | 2081 | 4.810491 | TGAAATTTTGCAGGAAGCTCAAAC | 59.190 | 37.500 | 0.00 | 0.00 | 45.94 | 2.93 |
2061 | 2082 | 4.405116 | AATTTTGCAGGAAGCTCAAACA | 57.595 | 36.364 | 0.00 | 0.00 | 45.94 | 2.83 |
2062 | 2083 | 4.612264 | ATTTTGCAGGAAGCTCAAACAT | 57.388 | 36.364 | 0.00 | 0.00 | 45.94 | 2.71 |
2063 | 2084 | 4.405116 | TTTTGCAGGAAGCTCAAACATT | 57.595 | 36.364 | 0.00 | 0.00 | 45.94 | 2.71 |
2064 | 2085 | 4.405116 | TTTGCAGGAAGCTCAAACATTT | 57.595 | 36.364 | 0.00 | 0.00 | 45.94 | 2.32 |
2065 | 2086 | 3.374220 | TGCAGGAAGCTCAAACATTTG | 57.626 | 42.857 | 0.00 | 0.00 | 45.94 | 2.32 |
2066 | 2087 | 2.957680 | TGCAGGAAGCTCAAACATTTGA | 59.042 | 40.909 | 6.85 | 6.85 | 45.94 | 2.69 |
2067 | 2088 | 3.575256 | TGCAGGAAGCTCAAACATTTGAT | 59.425 | 39.130 | 7.48 | 0.00 | 45.26 | 2.57 |
2068 | 2089 | 4.171754 | GCAGGAAGCTCAAACATTTGATC | 58.828 | 43.478 | 7.48 | 4.02 | 45.26 | 2.92 |
2069 | 2090 | 4.321452 | GCAGGAAGCTCAAACATTTGATCA | 60.321 | 41.667 | 7.48 | 0.00 | 45.26 | 2.92 |
2070 | 2091 | 5.775686 | CAGGAAGCTCAAACATTTGATCAA | 58.224 | 37.500 | 3.38 | 3.38 | 45.26 | 2.57 |
2071 | 2092 | 5.862323 | CAGGAAGCTCAAACATTTGATCAAG | 59.138 | 40.000 | 8.41 | 0.49 | 45.26 | 3.02 |
2072 | 2093 | 5.537674 | AGGAAGCTCAAACATTTGATCAAGT | 59.462 | 36.000 | 8.41 | 2.46 | 45.26 | 3.16 |
2073 | 2094 | 6.041296 | AGGAAGCTCAAACATTTGATCAAGTT | 59.959 | 34.615 | 8.41 | 7.69 | 45.26 | 2.66 |
2074 | 2095 | 6.703165 | GGAAGCTCAAACATTTGATCAAGTTT | 59.297 | 34.615 | 16.15 | 16.15 | 45.26 | 2.66 |
2091 | 2112 | 8.853077 | ATCAAGTTTGATGTCTCATAGTTTCA | 57.147 | 30.769 | 6.56 | 0.00 | 45.63 | 2.69 |
2092 | 2113 | 8.315391 | TCAAGTTTGATGTCTCATAGTTTCAG | 57.685 | 34.615 | 0.00 | 0.00 | 31.01 | 3.02 |
2093 | 2114 | 8.150296 | TCAAGTTTGATGTCTCATAGTTTCAGA | 58.850 | 33.333 | 0.00 | 0.00 | 31.01 | 3.27 |
2094 | 2115 | 8.944029 | CAAGTTTGATGTCTCATAGTTTCAGAT | 58.056 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2095 | 2116 | 9.512588 | AAGTTTGATGTCTCATAGTTTCAGATT | 57.487 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
2096 | 2117 | 9.512588 | AGTTTGATGTCTCATAGTTTCAGATTT | 57.487 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
2117 | 2138 | 3.953874 | TTTCGAGATTGTTTGTTCGCA | 57.046 | 38.095 | 0.00 | 0.00 | 33.36 | 5.10 |
2118 | 2139 | 4.481930 | TTTCGAGATTGTTTGTTCGCAT | 57.518 | 36.364 | 0.00 | 0.00 | 33.36 | 4.73 |
2119 | 2140 | 4.481930 | TTCGAGATTGTTTGTTCGCATT | 57.518 | 36.364 | 0.00 | 0.00 | 33.36 | 3.56 |
2120 | 2141 | 4.481930 | TCGAGATTGTTTGTTCGCATTT | 57.518 | 36.364 | 0.00 | 0.00 | 33.36 | 2.32 |
2121 | 2142 | 4.854399 | TCGAGATTGTTTGTTCGCATTTT | 58.146 | 34.783 | 0.00 | 0.00 | 33.36 | 1.82 |
2122 | 2143 | 5.277825 | TCGAGATTGTTTGTTCGCATTTTT | 58.722 | 33.333 | 0.00 | 0.00 | 33.36 | 1.94 |
2164 | 2185 | 2.354199 | GTGTAGTACACCCGAGAGTAGC | 59.646 | 54.545 | 20.77 | 0.00 | 43.05 | 3.58 |
2165 | 2186 | 1.946081 | GTAGTACACCCGAGAGTAGCC | 59.054 | 57.143 | 0.00 | 0.00 | 0.00 | 3.93 |
2166 | 2187 | 0.330604 | AGTACACCCGAGAGTAGCCA | 59.669 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
2167 | 2188 | 0.455005 | GTACACCCGAGAGTAGCCAC | 59.545 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2168 | 2189 | 0.038599 | TACACCCGAGAGTAGCCACA | 59.961 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2169 | 2190 | 1.215647 | CACCCGAGAGTAGCCACAC | 59.784 | 63.158 | 0.00 | 0.00 | 0.00 | 3.82 |
2170 | 2191 | 1.982938 | ACCCGAGAGTAGCCACACC | 60.983 | 63.158 | 0.00 | 0.00 | 0.00 | 4.16 |
2171 | 2192 | 1.682684 | CCCGAGAGTAGCCACACCT | 60.683 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
2172 | 2193 | 1.258445 | CCCGAGAGTAGCCACACCTT | 61.258 | 60.000 | 0.00 | 0.00 | 0.00 | 3.50 |
2173 | 2194 | 0.608640 | CCGAGAGTAGCCACACCTTT | 59.391 | 55.000 | 0.00 | 0.00 | 0.00 | 3.11 |
2174 | 2195 | 1.404315 | CCGAGAGTAGCCACACCTTTC | 60.404 | 57.143 | 0.00 | 0.00 | 0.00 | 2.62 |
2175 | 2196 | 1.404315 | CGAGAGTAGCCACACCTTTCC | 60.404 | 57.143 | 0.00 | 0.00 | 0.00 | 3.13 |
2176 | 2197 | 0.608640 | AGAGTAGCCACACCTTTCCG | 59.391 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2177 | 2198 | 0.391263 | GAGTAGCCACACCTTTCCGG | 60.391 | 60.000 | 0.00 | 0.00 | 39.35 | 5.14 |
2179 | 2200 | 0.250597 | GTAGCCACACCTTTCCGGTT | 60.251 | 55.000 | 0.00 | 0.00 | 46.37 | 4.44 |
2180 | 2201 | 0.475044 | TAGCCACACCTTTCCGGTTT | 59.525 | 50.000 | 0.00 | 0.00 | 46.37 | 3.27 |
2181 | 2202 | 0.822121 | AGCCACACCTTTCCGGTTTC | 60.822 | 55.000 | 0.00 | 0.00 | 46.37 | 2.78 |
2182 | 2203 | 0.822121 | GCCACACCTTTCCGGTTTCT | 60.822 | 55.000 | 0.00 | 0.00 | 46.37 | 2.52 |
2186 | 2207 | 3.824443 | CCACACCTTTCCGGTTTCTTATT | 59.176 | 43.478 | 0.00 | 0.00 | 46.37 | 1.40 |
2214 | 2235 | 9.583530 | CTTTTTATCATCTCTACTACGTAGACG | 57.416 | 37.037 | 28.74 | 17.52 | 39.81 | 4.18 |
2253 | 2274 | 3.861113 | TGTAATCGATGAACGCCTTGTAC | 59.139 | 43.478 | 0.00 | 0.00 | 42.26 | 2.90 |
2255 | 2276 | 1.990799 | TCGATGAACGCCTTGTACAG | 58.009 | 50.000 | 0.00 | 0.00 | 42.26 | 2.74 |
2260 | 2281 | 3.945981 | TGAACGCCTTGTACAGTATGA | 57.054 | 42.857 | 0.00 | 0.00 | 39.69 | 2.15 |
2332 | 2381 | 1.296832 | TGGAGGAATCCCACTATCCCA | 59.703 | 52.381 | 0.00 | 0.00 | 33.55 | 4.37 |
2355 | 2406 | 1.949525 | GCAACACTTATCGCCCATCAT | 59.050 | 47.619 | 0.00 | 0.00 | 0.00 | 2.45 |
2357 | 2408 | 2.154854 | ACACTTATCGCCCATCATCG | 57.845 | 50.000 | 0.00 | 0.00 | 0.00 | 3.84 |
2419 | 2470 | 5.957771 | AGGCATACTCTTCCAAATGAGTA | 57.042 | 39.130 | 5.49 | 5.49 | 45.90 | 2.59 |
2435 | 2486 | 0.036164 | AGTACCGTGGATTGCAGCAA | 59.964 | 50.000 | 11.07 | 11.07 | 0.00 | 3.91 |
2624 | 2680 | 8.613922 | AATTTTCTCCCATCATGTTTCCTAAT | 57.386 | 30.769 | 0.00 | 0.00 | 0.00 | 1.73 |
2651 | 2707 | 6.362820 | GGTTTCTACGAACTTACAGAGAAGTG | 59.637 | 42.308 | 0.00 | 0.00 | 39.62 | 3.16 |
2691 | 2749 | 8.651391 | TTCAGTTTAAAGTAATCGTCACTGAA | 57.349 | 30.769 | 7.21 | 7.21 | 44.03 | 3.02 |
2705 | 2867 | 3.499918 | GTCACTGAAATCAACCTCTGGTG | 59.500 | 47.826 | 0.00 | 0.00 | 35.34 | 4.17 |
2718 | 2880 | 1.556911 | CTCTGGTGGTGCTACTTGGAT | 59.443 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
2825 | 2988 | 1.146774 | TGGAATGAAGGCCCTGACAAA | 59.853 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
2826 | 2989 | 1.546029 | GGAATGAAGGCCCTGACAAAC | 59.454 | 52.381 | 0.00 | 0.00 | 0.00 | 2.93 |
2836 | 3600 | 1.206072 | CTGACAAACGAGCAGCTGC | 59.794 | 57.895 | 31.53 | 31.53 | 42.49 | 5.25 |
2907 | 3671 | 2.485038 | GGAAAAGGCCAAATGCAATGTG | 59.515 | 45.455 | 5.01 | 0.00 | 43.89 | 3.21 |
2921 | 3685 | 3.236816 | GCAATGTGTCATTCAGAAACCG | 58.763 | 45.455 | 0.00 | 0.00 | 33.19 | 4.44 |
2924 | 3688 | 5.702865 | CAATGTGTCATTCAGAAACCGAAT | 58.297 | 37.500 | 0.00 | 0.00 | 33.19 | 3.34 |
2925 | 3689 | 5.964958 | ATGTGTCATTCAGAAACCGAATT | 57.035 | 34.783 | 0.00 | 0.00 | 33.19 | 2.17 |
2959 | 3723 | 1.067425 | CGACCACGTCCATGTTCCTTA | 60.067 | 52.381 | 0.00 | 0.00 | 34.56 | 2.69 |
2960 | 3724 | 2.418197 | CGACCACGTCCATGTTCCTTAT | 60.418 | 50.000 | 0.00 | 0.00 | 34.56 | 1.73 |
2961 | 3725 | 3.195661 | GACCACGTCCATGTTCCTTATC | 58.804 | 50.000 | 0.00 | 0.00 | 0.00 | 1.75 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
14 | 15 | 2.373540 | TGCCATTGATCAGCAAAAGC | 57.626 | 45.000 | 5.70 | 1.33 | 40.48 | 3.51 |
25 | 26 | 4.201990 | GCACCAAACAAAAATTGCCATTGA | 60.202 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
27 | 28 | 3.952967 | AGCACCAAACAAAAATTGCCATT | 59.047 | 34.783 | 0.00 | 0.00 | 0.00 | 3.16 |
31 | 32 | 5.233957 | AGAAAGCACCAAACAAAAATTGC | 57.766 | 34.783 | 0.00 | 0.00 | 0.00 | 3.56 |
34 | 35 | 9.786105 | CAAAATAAGAAAGCACCAAACAAAAAT | 57.214 | 25.926 | 0.00 | 0.00 | 0.00 | 1.82 |
63 | 64 | 8.853345 | GCTACACACAAACTAATTTTCATGATG | 58.147 | 33.333 | 0.00 | 0.00 | 0.00 | 3.07 |
88 | 89 | 7.184106 | CCAAAAATGATGTAAAATCAGCATGC | 58.816 | 34.615 | 10.51 | 10.51 | 42.41 | 4.06 |
99 | 100 | 5.117584 | GCCATGATGCCAAAAATGATGTAA | 58.882 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
115 | 116 | 8.851541 | AAATTTAGTGTCATTTTTGCCATGAT | 57.148 | 26.923 | 0.00 | 0.00 | 33.22 | 2.45 |
194 | 195 | 4.690719 | CACGGGGTGCTTGCCGTA | 62.691 | 66.667 | 0.00 | 0.00 | 37.13 | 4.02 |
227 | 232 | 1.342076 | TGGTGGGCAAAAGTGGTGTAA | 60.342 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
241 | 246 | 1.851304 | ATAAAGTGTGCCATGGTGGG | 58.149 | 50.000 | 14.67 | 0.00 | 38.19 | 4.61 |
316 | 321 | 5.720371 | AATAGTAAGTTTGCCATGTTGCA | 57.280 | 34.783 | 0.00 | 0.00 | 40.07 | 4.08 |
341 | 346 | 9.083422 | TGAACTAAAATTTTCCATGGTCACATA | 57.917 | 29.630 | 12.58 | 0.00 | 34.99 | 2.29 |
437 | 443 | 7.920682 | AGACGTAAATGAAAAGCACAGAAAAAT | 59.079 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
465 | 471 | 1.619827 | CAATTTGCTGGGCCTCTTCAA | 59.380 | 47.619 | 4.53 | 0.52 | 0.00 | 2.69 |
466 | 472 | 1.259609 | CAATTTGCTGGGCCTCTTCA | 58.740 | 50.000 | 4.53 | 0.00 | 0.00 | 3.02 |
467 | 473 | 0.533951 | CCAATTTGCTGGGCCTCTTC | 59.466 | 55.000 | 4.53 | 0.00 | 32.32 | 2.87 |
483 | 489 | 2.657143 | AGAAAACGCCTAACAACCCAA | 58.343 | 42.857 | 0.00 | 0.00 | 0.00 | 4.12 |
497 | 503 | 1.261619 | CGGCGGCATGATCTAGAAAAC | 59.738 | 52.381 | 10.53 | 0.00 | 0.00 | 2.43 |
524 | 532 | 1.842381 | AAAAGTCCCTCCAGCCCGAG | 61.842 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
575 | 583 | 2.586258 | AGGAGACCATCGATCAAACG | 57.414 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
579 | 587 | 1.134699 | GCACAAGGAGACCATCGATCA | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 2.92 |
580 | 588 | 1.576356 | GCACAAGGAGACCATCGATC | 58.424 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
587 | 595 | 2.027625 | CGTTCGGCACAAGGAGACC | 61.028 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
589 | 597 | 1.289066 | CTCGTTCGGCACAAGGAGA | 59.711 | 57.895 | 9.78 | 0.00 | 39.60 | 3.71 |
615 | 623 | 4.667935 | TCCGGGGAAGGGCCAGAA | 62.668 | 66.667 | 6.18 | 0.00 | 38.95 | 3.02 |
638 | 646 | 6.036735 | AGGTTTTACATGATATTGACCGAACG | 59.963 | 38.462 | 0.00 | 0.00 | 0.00 | 3.95 |
639 | 647 | 7.316544 | AGGTTTTACATGATATTGACCGAAC | 57.683 | 36.000 | 0.00 | 0.00 | 0.00 | 3.95 |
640 | 648 | 8.479689 | TCTAGGTTTTACATGATATTGACCGAA | 58.520 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
641 | 649 | 8.014070 | TCTAGGTTTTACATGATATTGACCGA | 57.986 | 34.615 | 0.00 | 0.00 | 0.00 | 4.69 |
700 | 711 | 7.444792 | TCGTTAACAATACACACAATTAACCCT | 59.555 | 33.333 | 6.39 | 0.00 | 31.73 | 4.34 |
724 | 735 | 1.598183 | CCGTAGATGTAGCTGTGCTCG | 60.598 | 57.143 | 0.00 | 0.00 | 40.44 | 5.03 |
730 | 741 | 1.120530 | AACCCCCGTAGATGTAGCTG | 58.879 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
731 | 742 | 1.875488 | AAACCCCCGTAGATGTAGCT | 58.125 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
739 | 750 | 1.094785 | CTCATGCAAAACCCCCGTAG | 58.905 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
742 | 753 | 0.678950 | AAACTCATGCAAAACCCCCG | 59.321 | 50.000 | 0.00 | 0.00 | 0.00 | 5.73 |
748 | 759 | 2.625790 | AGCCCGTAAAACTCATGCAAAA | 59.374 | 40.909 | 0.00 | 0.00 | 0.00 | 2.44 |
752 | 763 | 1.940613 | CCTAGCCCGTAAAACTCATGC | 59.059 | 52.381 | 0.00 | 0.00 | 0.00 | 4.06 |
755 | 766 | 1.066430 | CAGCCTAGCCCGTAAAACTCA | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
759 | 770 | 0.539986 | CCTCAGCCTAGCCCGTAAAA | 59.460 | 55.000 | 0.00 | 0.00 | 0.00 | 1.52 |
783 | 794 | 9.906660 | TTTCATCTTAACAACCAATCAATACAC | 57.093 | 29.630 | 0.00 | 0.00 | 0.00 | 2.90 |
787 | 798 | 7.598493 | CCGTTTTCATCTTAACAACCAATCAAT | 59.402 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
795 | 806 | 3.571571 | GGCCCGTTTTCATCTTAACAAC | 58.428 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
823 | 834 | 7.504403 | TCACTAATCTCTCCATCCTGATTTTC | 58.496 | 38.462 | 0.00 | 0.00 | 32.33 | 2.29 |
833 | 844 | 3.469006 | TCTCCCCTCACTAATCTCTCCAT | 59.531 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
864 | 875 | 7.873910 | ACGGGAAATTTTACAAGAATTAACGA | 58.126 | 30.769 | 0.00 | 0.00 | 0.00 | 3.85 |
921 | 932 | 3.496884 | TGTCATTTCGTTGTTGTAGCCTC | 59.503 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
991 | 1002 | 0.872388 | CACGGAAAGTGTGGTAAGGC | 59.128 | 55.000 | 0.00 | 0.00 | 45.51 | 4.35 |
1008 | 1019 | 5.643664 | TCAAGCAATGCAATCTACATTCAC | 58.356 | 37.500 | 8.35 | 0.00 | 35.58 | 3.18 |
1021 | 1032 | 7.095017 | GGTCTAGGTTATTAGATCAAGCAATGC | 60.095 | 40.741 | 0.00 | 0.00 | 32.22 | 3.56 |
1037 | 1048 | 2.041612 | GGGCGGGGGTCTAGGTTA | 60.042 | 66.667 | 0.00 | 0.00 | 0.00 | 2.85 |
1073 | 1090 | 0.821301 | TTGCGCCTCAATTCACCACA | 60.821 | 50.000 | 4.18 | 0.00 | 0.00 | 4.17 |
1103 | 1120 | 4.821589 | CGAACCCTCCTCGCCTGC | 62.822 | 72.222 | 0.00 | 0.00 | 0.00 | 4.85 |
1186 | 1203 | 1.153842 | CCGCGTCAGCACATACTCA | 60.154 | 57.895 | 4.92 | 0.00 | 45.49 | 3.41 |
1385 | 1405 | 3.316573 | GATCCCGGGCGATGATCCC | 62.317 | 68.421 | 18.49 | 0.00 | 40.43 | 3.85 |
1387 | 1407 | 1.079543 | CTGATCCCGGGCGATGATC | 60.080 | 63.158 | 18.49 | 14.16 | 36.33 | 2.92 |
1411 | 1431 | 3.900892 | CCGATGGGGAGACGGTCG | 61.901 | 72.222 | 1.89 | 0.00 | 41.47 | 4.79 |
1531 | 1551 | 1.005394 | GAAACGCTCCCGAACCTGA | 60.005 | 57.895 | 0.00 | 0.00 | 38.29 | 3.86 |
1588 | 1608 | 1.906574 | TCAACCTCGACATAGCCCTTT | 59.093 | 47.619 | 0.00 | 0.00 | 0.00 | 3.11 |
1626 | 1646 | 3.962718 | CCATGCCTTGGTATCTTCCAATT | 59.037 | 43.478 | 0.00 | 0.00 | 44.94 | 2.32 |
1661 | 1681 | 0.459237 | CCTGCGTCTAAGTCTGCCTG | 60.459 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1733 | 1754 | 3.195825 | AGACAGATGGCTAACACAGGTAC | 59.804 | 47.826 | 0.00 | 0.00 | 0.00 | 3.34 |
1773 | 1794 | 9.015367 | TCGAAAGAAACACCATGGATAATAAAA | 57.985 | 29.630 | 21.47 | 0.00 | 37.03 | 1.52 |
1775 | 1796 | 8.044309 | TCTCGAAAGAAACACCATGGATAATAA | 58.956 | 33.333 | 21.47 | 0.00 | 41.32 | 1.40 |
1776 | 1797 | 7.494625 | GTCTCGAAAGAAACACCATGGATAATA | 59.505 | 37.037 | 21.47 | 0.00 | 41.32 | 0.98 |
1777 | 1798 | 6.316390 | GTCTCGAAAGAAACACCATGGATAAT | 59.684 | 38.462 | 21.47 | 1.12 | 41.32 | 1.28 |
1796 | 1817 | 8.289939 | AGTTACAGTATAAAATCCAGTCTCGA | 57.710 | 34.615 | 0.00 | 0.00 | 0.00 | 4.04 |
1797 | 1818 | 8.928270 | AAGTTACAGTATAAAATCCAGTCTCG | 57.072 | 34.615 | 0.00 | 0.00 | 0.00 | 4.04 |
1799 | 1820 | 9.449719 | CCAAAGTTACAGTATAAAATCCAGTCT | 57.550 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
1800 | 1821 | 9.444600 | TCCAAAGTTACAGTATAAAATCCAGTC | 57.555 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
1801 | 1822 | 9.802039 | TTCCAAAGTTACAGTATAAAATCCAGT | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 4.00 |
1837 | 1858 | 7.864379 | AGTTACAGATTTTTCGAGTTAGTTCGA | 59.136 | 33.333 | 0.00 | 0.00 | 46.86 | 3.71 |
1838 | 1859 | 8.004585 | AGTTACAGATTTTTCGAGTTAGTTCG | 57.995 | 34.615 | 0.00 | 0.00 | 41.79 | 3.95 |
1840 | 1861 | 9.931210 | CAAAGTTACAGATTTTTCGAGTTAGTT | 57.069 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
1841 | 1862 | 9.321562 | TCAAAGTTACAGATTTTTCGAGTTAGT | 57.678 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
1842 | 1863 | 9.798885 | CTCAAAGTTACAGATTTTTCGAGTTAG | 57.201 | 33.333 | 0.00 | 0.00 | 0.00 | 2.34 |
1843 | 1864 | 9.537192 | TCTCAAAGTTACAGATTTTTCGAGTTA | 57.463 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
1844 | 1865 | 8.336080 | GTCTCAAAGTTACAGATTTTTCGAGTT | 58.664 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
1845 | 1866 | 7.494625 | TGTCTCAAAGTTACAGATTTTTCGAGT | 59.505 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
1846 | 1867 | 7.851508 | TGTCTCAAAGTTACAGATTTTTCGAG | 58.148 | 34.615 | 0.00 | 0.00 | 0.00 | 4.04 |
1847 | 1868 | 7.780008 | TGTCTCAAAGTTACAGATTTTTCGA | 57.220 | 32.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1848 | 1869 | 8.282592 | TGATGTCTCAAAGTTACAGATTTTTCG | 58.717 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
1849 | 1870 | 9.950680 | TTGATGTCTCAAAGTTACAGATTTTTC | 57.049 | 29.630 | 0.00 | 0.00 | 38.43 | 2.29 |
1872 | 1893 | 5.239306 | AGCTCGAACATTTGATCAAGTTTGA | 59.761 | 36.000 | 20.88 | 20.88 | 42.14 | 2.69 |
1873 | 1894 | 5.455392 | AGCTCGAACATTTGATCAAGTTTG | 58.545 | 37.500 | 16.46 | 16.46 | 0.00 | 2.93 |
1874 | 1895 | 5.695851 | AGCTCGAACATTTGATCAAGTTT | 57.304 | 34.783 | 8.41 | 3.31 | 0.00 | 2.66 |
1875 | 1896 | 6.428159 | AGTTAGCTCGAACATTTGATCAAGTT | 59.572 | 34.615 | 11.66 | 11.66 | 0.00 | 2.66 |
1876 | 1897 | 5.934625 | AGTTAGCTCGAACATTTGATCAAGT | 59.065 | 36.000 | 8.41 | 2.46 | 0.00 | 3.16 |
1877 | 1898 | 6.246449 | CAGTTAGCTCGAACATTTGATCAAG | 58.754 | 40.000 | 8.41 | 0.49 | 0.00 | 3.02 |
1878 | 1899 | 5.122239 | CCAGTTAGCTCGAACATTTGATCAA | 59.878 | 40.000 | 3.38 | 3.38 | 0.00 | 2.57 |
1879 | 1900 | 4.631377 | CCAGTTAGCTCGAACATTTGATCA | 59.369 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
1880 | 1901 | 4.494855 | GCCAGTTAGCTCGAACATTTGATC | 60.495 | 45.833 | 0.00 | 0.00 | 0.00 | 2.92 |
1881 | 1902 | 3.375299 | GCCAGTTAGCTCGAACATTTGAT | 59.625 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
1882 | 1903 | 2.742053 | GCCAGTTAGCTCGAACATTTGA | 59.258 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
1883 | 1904 | 2.483877 | TGCCAGTTAGCTCGAACATTTG | 59.516 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
1884 | 1905 | 2.778299 | TGCCAGTTAGCTCGAACATTT | 58.222 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
1885 | 1906 | 2.472695 | TGCCAGTTAGCTCGAACATT | 57.527 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1886 | 1907 | 2.472695 | TTGCCAGTTAGCTCGAACAT | 57.527 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1887 | 1908 | 2.248280 | TTTGCCAGTTAGCTCGAACA | 57.752 | 45.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1888 | 1909 | 2.484264 | ACATTTGCCAGTTAGCTCGAAC | 59.516 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
1889 | 1910 | 2.742053 | GACATTTGCCAGTTAGCTCGAA | 59.258 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
1890 | 1911 | 2.289382 | TGACATTTGCCAGTTAGCTCGA | 60.289 | 45.455 | 0.00 | 0.00 | 0.00 | 4.04 |
1891 | 1912 | 2.076100 | TGACATTTGCCAGTTAGCTCG | 58.924 | 47.619 | 0.00 | 0.00 | 0.00 | 5.03 |
1892 | 1913 | 2.159462 | GCTGACATTTGCCAGTTAGCTC | 60.159 | 50.000 | 0.00 | 0.00 | 42.17 | 4.09 |
1893 | 1914 | 1.815003 | GCTGACATTTGCCAGTTAGCT | 59.185 | 47.619 | 0.00 | 0.00 | 42.17 | 3.32 |
1894 | 1915 | 2.268730 | GCTGACATTTGCCAGTTAGC | 57.731 | 50.000 | 0.00 | 0.00 | 39.61 | 3.09 |
1902 | 1923 | 2.796593 | GTTGTTTCTGGCTGACATTTGC | 59.203 | 45.455 | 0.00 | 0.00 | 0.00 | 3.68 |
1903 | 1924 | 4.044336 | TGTTGTTTCTGGCTGACATTTG | 57.956 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
1904 | 1925 | 4.341806 | TGATGTTGTTTCTGGCTGACATTT | 59.658 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
1905 | 1926 | 3.890756 | TGATGTTGTTTCTGGCTGACATT | 59.109 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
1906 | 1927 | 3.489355 | TGATGTTGTTTCTGGCTGACAT | 58.511 | 40.909 | 0.00 | 0.00 | 0.00 | 3.06 |
1907 | 1928 | 2.880268 | CTGATGTTGTTTCTGGCTGACA | 59.120 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
1908 | 1929 | 3.141398 | TCTGATGTTGTTTCTGGCTGAC | 58.859 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
1909 | 1930 | 3.405831 | CTCTGATGTTGTTTCTGGCTGA | 58.594 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
1910 | 1931 | 2.486982 | CCTCTGATGTTGTTTCTGGCTG | 59.513 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1911 | 1932 | 2.373169 | TCCTCTGATGTTGTTTCTGGCT | 59.627 | 45.455 | 0.00 | 0.00 | 0.00 | 4.75 |
1912 | 1933 | 2.746362 | CTCCTCTGATGTTGTTTCTGGC | 59.254 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1913 | 1934 | 2.746362 | GCTCCTCTGATGTTGTTTCTGG | 59.254 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1914 | 1935 | 3.672808 | AGCTCCTCTGATGTTGTTTCTG | 58.327 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
1915 | 1936 | 3.582208 | AGAGCTCCTCTGATGTTGTTTCT | 59.418 | 43.478 | 10.93 | 0.00 | 39.62 | 2.52 |
1916 | 1937 | 3.932089 | GAGAGCTCCTCTGATGTTGTTTC | 59.068 | 47.826 | 10.93 | 0.00 | 41.35 | 2.78 |
1917 | 1938 | 3.326006 | TGAGAGCTCCTCTGATGTTGTTT | 59.674 | 43.478 | 10.93 | 0.00 | 41.35 | 2.83 |
1918 | 1939 | 2.902486 | TGAGAGCTCCTCTGATGTTGTT | 59.098 | 45.455 | 10.93 | 0.00 | 41.35 | 2.83 |
1919 | 1940 | 2.233431 | GTGAGAGCTCCTCTGATGTTGT | 59.767 | 50.000 | 10.93 | 0.00 | 41.35 | 3.32 |
1920 | 1941 | 2.418471 | GGTGAGAGCTCCTCTGATGTTG | 60.418 | 54.545 | 10.93 | 0.00 | 41.35 | 3.33 |
1921 | 1942 | 1.830477 | GGTGAGAGCTCCTCTGATGTT | 59.170 | 52.381 | 10.93 | 0.00 | 41.35 | 2.71 |
1922 | 1943 | 1.272928 | TGGTGAGAGCTCCTCTGATGT | 60.273 | 52.381 | 10.93 | 0.00 | 41.35 | 3.06 |
1923 | 1944 | 1.482954 | TGGTGAGAGCTCCTCTGATG | 58.517 | 55.000 | 10.93 | 0.00 | 41.35 | 3.07 |
1924 | 1945 | 2.244486 | TTGGTGAGAGCTCCTCTGAT | 57.756 | 50.000 | 10.93 | 0.00 | 41.35 | 2.90 |
1925 | 1946 | 2.015456 | TTTGGTGAGAGCTCCTCTGA | 57.985 | 50.000 | 10.93 | 0.00 | 41.35 | 3.27 |
1926 | 1947 | 2.847327 | TTTTGGTGAGAGCTCCTCTG | 57.153 | 50.000 | 10.93 | 0.00 | 41.35 | 3.35 |
1947 | 1968 | 9.657419 | ACAAAACTTTGAAGATTGATTTTGTCT | 57.343 | 25.926 | 9.12 | 0.00 | 42.19 | 3.41 |
1948 | 1969 | 9.693157 | CACAAAACTTTGAAGATTGATTTTGTC | 57.307 | 29.630 | 9.12 | 0.00 | 43.33 | 3.18 |
1949 | 1970 | 8.177013 | GCACAAAACTTTGAAGATTGATTTTGT | 58.823 | 29.630 | 9.12 | 14.01 | 45.02 | 2.83 |
1950 | 1971 | 8.176365 | TGCACAAAACTTTGAAGATTGATTTTG | 58.824 | 29.630 | 9.12 | 13.58 | 40.55 | 2.44 |
1951 | 1972 | 8.177013 | GTGCACAAAACTTTGAAGATTGATTTT | 58.823 | 29.630 | 13.17 | 3.47 | 40.55 | 1.82 |
1952 | 1973 | 7.550196 | AGTGCACAAAACTTTGAAGATTGATTT | 59.450 | 29.630 | 21.04 | 0.00 | 40.55 | 2.17 |
1953 | 1974 | 7.010738 | CAGTGCACAAAACTTTGAAGATTGATT | 59.989 | 33.333 | 21.04 | 0.00 | 40.55 | 2.57 |
1954 | 1975 | 6.477688 | CAGTGCACAAAACTTTGAAGATTGAT | 59.522 | 34.615 | 21.04 | 0.00 | 40.55 | 2.57 |
1955 | 1976 | 5.806502 | CAGTGCACAAAACTTTGAAGATTGA | 59.193 | 36.000 | 21.04 | 0.00 | 40.55 | 2.57 |
1956 | 1977 | 5.577945 | ACAGTGCACAAAACTTTGAAGATTG | 59.422 | 36.000 | 21.04 | 4.83 | 40.55 | 2.67 |
1957 | 1978 | 5.723295 | ACAGTGCACAAAACTTTGAAGATT | 58.277 | 33.333 | 21.04 | 0.00 | 40.55 | 2.40 |
1958 | 1979 | 5.329035 | ACAGTGCACAAAACTTTGAAGAT | 57.671 | 34.783 | 21.04 | 0.00 | 40.55 | 2.40 |
1959 | 1980 | 4.782019 | ACAGTGCACAAAACTTTGAAGA | 57.218 | 36.364 | 21.04 | 0.00 | 40.55 | 2.87 |
1960 | 1981 | 5.404968 | TCAAACAGTGCACAAAACTTTGAAG | 59.595 | 36.000 | 21.04 | 2.80 | 40.55 | 3.02 |
1961 | 1982 | 5.292765 | TCAAACAGTGCACAAAACTTTGAA | 58.707 | 33.333 | 21.04 | 6.29 | 40.55 | 2.69 |
1962 | 1983 | 4.876125 | TCAAACAGTGCACAAAACTTTGA | 58.124 | 34.783 | 21.04 | 18.26 | 40.55 | 2.69 |
1963 | 1984 | 4.922692 | TCTCAAACAGTGCACAAAACTTTG | 59.077 | 37.500 | 21.04 | 16.49 | 43.62 | 2.77 |
1964 | 1985 | 5.132897 | TCTCAAACAGTGCACAAAACTTT | 57.867 | 34.783 | 21.04 | 5.59 | 0.00 | 2.66 |
1965 | 1986 | 4.782019 | TCTCAAACAGTGCACAAAACTT | 57.218 | 36.364 | 21.04 | 1.71 | 0.00 | 2.66 |
1966 | 1987 | 4.218417 | ACTTCTCAAACAGTGCACAAAACT | 59.782 | 37.500 | 21.04 | 0.00 | 0.00 | 2.66 |
1967 | 1988 | 4.324402 | CACTTCTCAAACAGTGCACAAAAC | 59.676 | 41.667 | 21.04 | 0.00 | 34.33 | 2.43 |
1968 | 1989 | 4.217334 | TCACTTCTCAAACAGTGCACAAAA | 59.783 | 37.500 | 21.04 | 0.34 | 40.33 | 2.44 |
1969 | 1990 | 3.755905 | TCACTTCTCAAACAGTGCACAAA | 59.244 | 39.130 | 21.04 | 0.00 | 40.33 | 2.83 |
1970 | 1991 | 3.342719 | TCACTTCTCAAACAGTGCACAA | 58.657 | 40.909 | 21.04 | 0.33 | 40.33 | 3.33 |
1971 | 1992 | 2.984562 | TCACTTCTCAAACAGTGCACA | 58.015 | 42.857 | 21.04 | 0.00 | 40.33 | 4.57 |
1972 | 1993 | 4.558538 | AATCACTTCTCAAACAGTGCAC | 57.441 | 40.909 | 9.40 | 9.40 | 40.33 | 4.57 |
1973 | 1994 | 5.105797 | ACAAAATCACTTCTCAAACAGTGCA | 60.106 | 36.000 | 0.00 | 0.00 | 40.33 | 4.57 |
1974 | 1995 | 5.343249 | ACAAAATCACTTCTCAAACAGTGC | 58.657 | 37.500 | 0.00 | 0.00 | 40.33 | 4.40 |
1975 | 1996 | 7.816945 | AAACAAAATCACTTCTCAAACAGTG | 57.183 | 32.000 | 0.00 | 0.00 | 41.65 | 3.66 |
1976 | 1997 | 8.831715 | AAAAACAAAATCACTTCTCAAACAGT | 57.168 | 26.923 | 0.00 | 0.00 | 0.00 | 3.55 |
2010 | 2031 | 6.038050 | CCAAAGAAAACATATGAGGAGCTCTC | 59.962 | 42.308 | 14.64 | 9.73 | 42.74 | 3.20 |
2011 | 2032 | 5.884792 | CCAAAGAAAACATATGAGGAGCTCT | 59.115 | 40.000 | 14.64 | 0.00 | 0.00 | 4.09 |
2012 | 2033 | 5.449725 | GCCAAAGAAAACATATGAGGAGCTC | 60.450 | 44.000 | 10.38 | 4.71 | 0.00 | 4.09 |
2013 | 2034 | 4.400567 | GCCAAAGAAAACATATGAGGAGCT | 59.599 | 41.667 | 10.38 | 0.00 | 0.00 | 4.09 |
2014 | 2035 | 4.400567 | AGCCAAAGAAAACATATGAGGAGC | 59.599 | 41.667 | 10.38 | 0.02 | 0.00 | 4.70 |
2015 | 2036 | 5.649395 | TCAGCCAAAGAAAACATATGAGGAG | 59.351 | 40.000 | 10.38 | 0.00 | 0.00 | 3.69 |
2016 | 2037 | 5.569355 | TCAGCCAAAGAAAACATATGAGGA | 58.431 | 37.500 | 10.38 | 0.00 | 0.00 | 3.71 |
2017 | 2038 | 5.902613 | TCAGCCAAAGAAAACATATGAGG | 57.097 | 39.130 | 10.38 | 0.00 | 0.00 | 3.86 |
2018 | 2039 | 8.767478 | AATTTCAGCCAAAGAAAACATATGAG | 57.233 | 30.769 | 10.38 | 0.00 | 38.36 | 2.90 |
2019 | 2040 | 9.558396 | AAAATTTCAGCCAAAGAAAACATATGA | 57.442 | 25.926 | 10.38 | 0.00 | 38.36 | 2.15 |
2020 | 2041 | 9.601971 | CAAAATTTCAGCCAAAGAAAACATATG | 57.398 | 29.630 | 0.00 | 0.00 | 38.36 | 1.78 |
2021 | 2042 | 8.291740 | GCAAAATTTCAGCCAAAGAAAACATAT | 58.708 | 29.630 | 4.66 | 0.00 | 38.36 | 1.78 |
2022 | 2043 | 7.281774 | TGCAAAATTTCAGCCAAAGAAAACATA | 59.718 | 29.630 | 11.62 | 0.00 | 38.36 | 2.29 |
2023 | 2044 | 6.095160 | TGCAAAATTTCAGCCAAAGAAAACAT | 59.905 | 30.769 | 11.62 | 0.00 | 38.36 | 2.71 |
2024 | 2045 | 5.413833 | TGCAAAATTTCAGCCAAAGAAAACA | 59.586 | 32.000 | 11.62 | 0.00 | 38.36 | 2.83 |
2025 | 2046 | 5.878133 | TGCAAAATTTCAGCCAAAGAAAAC | 58.122 | 33.333 | 11.62 | 0.00 | 38.36 | 2.43 |
2026 | 2047 | 5.066246 | CCTGCAAAATTTCAGCCAAAGAAAA | 59.934 | 36.000 | 11.62 | 0.00 | 38.36 | 2.29 |
2027 | 2048 | 4.575645 | CCTGCAAAATTTCAGCCAAAGAAA | 59.424 | 37.500 | 11.62 | 0.00 | 39.11 | 2.52 |
2028 | 2049 | 4.128643 | CCTGCAAAATTTCAGCCAAAGAA | 58.871 | 39.130 | 11.62 | 0.00 | 0.00 | 2.52 |
2029 | 2050 | 3.387374 | TCCTGCAAAATTTCAGCCAAAGA | 59.613 | 39.130 | 11.62 | 2.96 | 0.00 | 2.52 |
2030 | 2051 | 3.731089 | TCCTGCAAAATTTCAGCCAAAG | 58.269 | 40.909 | 11.62 | 4.53 | 0.00 | 2.77 |
2031 | 2052 | 3.834489 | TCCTGCAAAATTTCAGCCAAA | 57.166 | 38.095 | 11.62 | 0.00 | 0.00 | 3.28 |
2032 | 2053 | 3.731089 | CTTCCTGCAAAATTTCAGCCAA | 58.269 | 40.909 | 11.62 | 2.77 | 0.00 | 4.52 |
2033 | 2054 | 2.548493 | GCTTCCTGCAAAATTTCAGCCA | 60.548 | 45.455 | 11.62 | 2.08 | 42.31 | 4.75 |
2034 | 2055 | 2.071540 | GCTTCCTGCAAAATTTCAGCC | 58.928 | 47.619 | 11.62 | 0.00 | 42.31 | 4.85 |
2035 | 2056 | 2.991866 | GAGCTTCCTGCAAAATTTCAGC | 59.008 | 45.455 | 8.24 | 8.24 | 45.94 | 4.26 |
2036 | 2057 | 4.247267 | TGAGCTTCCTGCAAAATTTCAG | 57.753 | 40.909 | 0.00 | 0.00 | 45.94 | 3.02 |
2037 | 2058 | 4.669206 | TTGAGCTTCCTGCAAAATTTCA | 57.331 | 36.364 | 0.00 | 0.00 | 45.94 | 2.69 |
2038 | 2059 | 4.810491 | TGTTTGAGCTTCCTGCAAAATTTC | 59.190 | 37.500 | 0.00 | 0.00 | 45.94 | 2.17 |
2039 | 2060 | 4.768583 | TGTTTGAGCTTCCTGCAAAATTT | 58.231 | 34.783 | 0.00 | 0.00 | 45.94 | 1.82 |
2040 | 2061 | 4.405116 | TGTTTGAGCTTCCTGCAAAATT | 57.595 | 36.364 | 0.00 | 0.00 | 45.94 | 1.82 |
2041 | 2062 | 4.612264 | ATGTTTGAGCTTCCTGCAAAAT | 57.388 | 36.364 | 0.00 | 0.00 | 45.94 | 1.82 |
2042 | 2063 | 4.405116 | AATGTTTGAGCTTCCTGCAAAA | 57.595 | 36.364 | 0.00 | 0.00 | 45.94 | 2.44 |
2043 | 2064 | 4.121317 | CAAATGTTTGAGCTTCCTGCAAA | 58.879 | 39.130 | 0.00 | 0.00 | 45.94 | 3.68 |
2044 | 2065 | 3.384146 | TCAAATGTTTGAGCTTCCTGCAA | 59.616 | 39.130 | 4.16 | 0.00 | 41.88 | 4.08 |
2045 | 2066 | 2.957680 | TCAAATGTTTGAGCTTCCTGCA | 59.042 | 40.909 | 4.16 | 0.00 | 41.88 | 4.41 |
2046 | 2067 | 3.648339 | TCAAATGTTTGAGCTTCCTGC | 57.352 | 42.857 | 4.16 | 0.00 | 41.88 | 4.85 |
2056 | 2077 | 8.583810 | AGACATCAAACTTGATCAAATGTTTG | 57.416 | 30.769 | 29.65 | 29.65 | 45.62 | 2.93 |
2057 | 2078 | 8.415553 | TGAGACATCAAACTTGATCAAATGTTT | 58.584 | 29.630 | 18.90 | 17.54 | 45.62 | 2.83 |
2058 | 2079 | 7.944061 | TGAGACATCAAACTTGATCAAATGTT | 58.056 | 30.769 | 18.90 | 13.51 | 45.62 | 2.71 |
2059 | 2080 | 7.514784 | TGAGACATCAAACTTGATCAAATGT | 57.485 | 32.000 | 18.25 | 18.25 | 45.62 | 2.71 |
2060 | 2081 | 9.717892 | CTATGAGACATCAAACTTGATCAAATG | 57.282 | 33.333 | 9.88 | 11.86 | 45.62 | 2.32 |
2061 | 2082 | 9.458727 | ACTATGAGACATCAAACTTGATCAAAT | 57.541 | 29.630 | 9.88 | 0.00 | 45.62 | 2.32 |
2062 | 2083 | 8.853077 | ACTATGAGACATCAAACTTGATCAAA | 57.147 | 30.769 | 9.88 | 0.00 | 45.62 | 2.69 |
2063 | 2084 | 8.853077 | AACTATGAGACATCAAACTTGATCAA | 57.147 | 30.769 | 8.12 | 8.12 | 45.62 | 2.57 |
2064 | 2085 | 8.853077 | AAACTATGAGACATCAAACTTGATCA | 57.147 | 30.769 | 1.87 | 0.00 | 45.62 | 2.92 |
2065 | 2086 | 8.939929 | TGAAACTATGAGACATCAAACTTGATC | 58.060 | 33.333 | 1.87 | 0.00 | 45.62 | 2.92 |
2067 | 2088 | 8.150296 | TCTGAAACTATGAGACATCAAACTTGA | 58.850 | 33.333 | 0.00 | 0.00 | 39.39 | 3.02 |
2068 | 2089 | 8.315391 | TCTGAAACTATGAGACATCAAACTTG | 57.685 | 34.615 | 0.00 | 0.00 | 39.39 | 3.16 |
2069 | 2090 | 9.512588 | AATCTGAAACTATGAGACATCAAACTT | 57.487 | 29.630 | 0.00 | 0.00 | 39.39 | 2.66 |
2070 | 2091 | 9.512588 | AAATCTGAAACTATGAGACATCAAACT | 57.487 | 29.630 | 0.00 | 0.00 | 39.39 | 2.66 |
2095 | 2116 | 4.663166 | TGCGAACAAACAATCTCGAAAAA | 58.337 | 34.783 | 0.00 | 0.00 | 33.13 | 1.94 |
2096 | 2117 | 4.280101 | TGCGAACAAACAATCTCGAAAA | 57.720 | 36.364 | 0.00 | 0.00 | 33.13 | 2.29 |
2097 | 2118 | 3.953874 | TGCGAACAAACAATCTCGAAA | 57.046 | 38.095 | 0.00 | 0.00 | 33.13 | 3.46 |
2098 | 2119 | 4.481930 | AATGCGAACAAACAATCTCGAA | 57.518 | 36.364 | 0.00 | 0.00 | 33.13 | 3.71 |
2099 | 2120 | 4.481930 | AAATGCGAACAAACAATCTCGA | 57.518 | 36.364 | 0.00 | 0.00 | 33.13 | 4.04 |
2100 | 2121 | 5.559694 | AAAAATGCGAACAAACAATCTCG | 57.440 | 34.783 | 0.00 | 0.00 | 0.00 | 4.04 |
2130 | 2151 | 6.843069 | GTGTACTACACCCGAGTTTAAAAA | 57.157 | 37.500 | 7.99 | 0.00 | 43.05 | 1.94 |
2144 | 2165 | 2.636830 | GCTACTCTCGGGTGTACTACA | 58.363 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
2145 | 2166 | 1.946081 | GGCTACTCTCGGGTGTACTAC | 59.054 | 57.143 | 0.00 | 0.00 | 0.00 | 2.73 |
2146 | 2167 | 1.561076 | TGGCTACTCTCGGGTGTACTA | 59.439 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
2147 | 2168 | 0.330604 | TGGCTACTCTCGGGTGTACT | 59.669 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2148 | 2169 | 0.455005 | GTGGCTACTCTCGGGTGTAC | 59.545 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2149 | 2170 | 0.038599 | TGTGGCTACTCTCGGGTGTA | 59.961 | 55.000 | 0.64 | 0.00 | 0.00 | 2.90 |
2150 | 2171 | 1.228769 | TGTGGCTACTCTCGGGTGT | 60.229 | 57.895 | 0.64 | 0.00 | 0.00 | 4.16 |
2151 | 2172 | 1.215647 | GTGTGGCTACTCTCGGGTG | 59.784 | 63.158 | 0.64 | 0.00 | 0.00 | 4.61 |
2152 | 2173 | 1.982938 | GGTGTGGCTACTCTCGGGT | 60.983 | 63.158 | 0.64 | 0.00 | 0.00 | 5.28 |
2153 | 2174 | 1.258445 | AAGGTGTGGCTACTCTCGGG | 61.258 | 60.000 | 0.64 | 0.00 | 0.00 | 5.14 |
2154 | 2175 | 0.608640 | AAAGGTGTGGCTACTCTCGG | 59.391 | 55.000 | 0.64 | 0.00 | 0.00 | 4.63 |
2155 | 2176 | 1.404315 | GGAAAGGTGTGGCTACTCTCG | 60.404 | 57.143 | 0.64 | 0.00 | 0.00 | 4.04 |
2156 | 2177 | 1.404315 | CGGAAAGGTGTGGCTACTCTC | 60.404 | 57.143 | 0.64 | 0.00 | 0.00 | 3.20 |
2157 | 2178 | 0.608640 | CGGAAAGGTGTGGCTACTCT | 59.391 | 55.000 | 0.64 | 0.00 | 0.00 | 3.24 |
2158 | 2179 | 0.391263 | CCGGAAAGGTGTGGCTACTC | 60.391 | 60.000 | 0.00 | 0.00 | 34.51 | 2.59 |
2159 | 2180 | 1.677552 | CCGGAAAGGTGTGGCTACT | 59.322 | 57.895 | 0.00 | 0.00 | 34.51 | 2.57 |
2160 | 2181 | 4.296265 | CCGGAAAGGTGTGGCTAC | 57.704 | 61.111 | 0.00 | 0.00 | 34.51 | 3.58 |
2332 | 2381 | 3.181455 | TGATGGGCGATAAGTGTTGCTAT | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 2.97 |
2355 | 2406 | 4.277423 | TCTTCTTGCGGATATACATCACGA | 59.723 | 41.667 | 0.00 | 0.00 | 32.32 | 4.35 |
2357 | 2408 | 6.073548 | CCTTTCTTCTTGCGGATATACATCAC | 60.074 | 42.308 | 0.00 | 0.00 | 32.32 | 3.06 |
2419 | 2470 | 2.057137 | ATATTGCTGCAATCCACGGT | 57.943 | 45.000 | 29.29 | 9.25 | 35.54 | 4.83 |
2435 | 2486 | 0.175760 | AGGACGACTGCGCACAATAT | 59.824 | 50.000 | 5.66 | 0.00 | 42.48 | 1.28 |
2445 | 2496 | 6.456447 | TTTTCGTACAATAAAGGACGACTG | 57.544 | 37.500 | 0.25 | 0.00 | 43.44 | 3.51 |
2446 | 2497 | 6.401796 | GCATTTTCGTACAATAAAGGACGACT | 60.402 | 38.462 | 0.25 | 0.00 | 43.44 | 4.18 |
2624 | 2680 | 7.446625 | ACTTCTCTGTAAGTTCGTAGAAACCTA | 59.553 | 37.037 | 0.00 | 0.00 | 45.90 | 3.08 |
2651 | 2707 | 9.176181 | CTTTAAACTGAATCTAGCTAGATCGTC | 57.824 | 37.037 | 31.49 | 25.88 | 41.96 | 4.20 |
2687 | 2745 | 2.816087 | CACCACCAGAGGTTGATTTCAG | 59.184 | 50.000 | 0.00 | 0.00 | 40.77 | 3.02 |
2691 | 2749 | 0.773644 | AGCACCACCAGAGGTTGATT | 59.226 | 50.000 | 0.00 | 0.00 | 40.77 | 2.57 |
2705 | 2867 | 1.771255 | AGATGGGATCCAAGTAGCACC | 59.229 | 52.381 | 15.23 | 0.00 | 36.95 | 5.01 |
2718 | 2880 | 1.137675 | CTCACTCATTCGCAGATGGGA | 59.862 | 52.381 | 3.37 | 0.00 | 35.04 | 4.37 |
2825 | 2988 | 1.153608 | CTGATCTGCAGCTGCTCGT | 60.154 | 57.895 | 36.61 | 22.69 | 42.66 | 4.18 |
2826 | 2989 | 3.707440 | CTGATCTGCAGCTGCTCG | 58.293 | 61.111 | 36.61 | 26.92 | 42.66 | 5.03 |
2907 | 3671 | 7.078228 | GGCATATAATTCGGTTTCTGAATGAC | 58.922 | 38.462 | 4.84 | 0.00 | 36.24 | 3.06 |
2921 | 3685 | 2.735134 | GTCGTGTCCCGGCATATAATTC | 59.265 | 50.000 | 0.00 | 0.00 | 41.97 | 2.17 |
2924 | 3688 | 0.390124 | GGTCGTGTCCCGGCATATAA | 59.610 | 55.000 | 0.00 | 0.00 | 44.95 | 0.98 |
2925 | 3689 | 0.756070 | TGGTCGTGTCCCGGCATATA | 60.756 | 55.000 | 0.00 | 0.00 | 44.95 | 0.86 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.