Multiple sequence alignment - TraesCS2D01G514600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G514600 chr2D 100.000 2899 0 0 1 2899 606553692 606556590 0.000000e+00 5354
1 TraesCS2D01G514600 chr2D 85.630 508 41 21 1043 1542 606517604 606518087 3.330000e-139 505
2 TraesCS2D01G514600 chr2D 84.100 478 55 8 1070 1542 606596643 606597104 2.650000e-120 442
3 TraesCS2D01G514600 chr2D 84.516 155 16 5 1321 1468 606637289 606637442 2.330000e-31 147
4 TraesCS2D01G514600 chr2D 92.045 88 7 0 538 625 556926513 556926426 1.090000e-24 124
5 TraesCS2D01G514600 chr2D 78.008 241 19 18 1957 2187 606597591 606597807 1.410000e-23 121
6 TraesCS2D01G514600 chr2D 89.362 94 10 0 538 631 14626041 14625948 5.070000e-23 119
7 TraesCS2D01G514600 chr2D 89.247 93 10 0 531 623 432744295 432744387 1.830000e-22 117
8 TraesCS2D01G514600 chr2D 81.529 157 13 10 2750 2898 606598308 606598456 6.560000e-22 115
9 TraesCS2D01G514600 chr2B 86.397 691 62 16 1957 2621 737689859 737690543 0.000000e+00 726
10 TraesCS2D01G514600 chr2B 85.804 634 55 12 1089 1695 737688678 737689303 8.760000e-180 640
11 TraesCS2D01G514600 chr2B 86.431 538 36 23 1023 1542 737694072 737694590 3.260000e-154 555
12 TraesCS2D01G514600 chr2B 93.000 300 15 1 2606 2899 737691743 737692042 1.600000e-117 433
13 TraesCS2D01G514600 chr2B 84.568 162 20 5 619 778 714032771 714032929 3.870000e-34 156
14 TraesCS2D01G514600 chr2B 85.065 154 15 5 1322 1468 738176031 738176183 1.800000e-32 150
15 TraesCS2D01G514600 chr2A 92.203 513 29 2 2398 2899 738055669 738056181 0.000000e+00 715
16 TraesCS2D01G514600 chr2A 84.100 522 56 19 1013 1532 738043400 738043896 2.020000e-131 479
17 TraesCS2D01G514600 chr2A 90.426 282 16 8 312 584 738052865 738053144 7.640000e-96 361
18 TraesCS2D01G514600 chr2A 93.839 211 13 0 1 211 738052232 738052442 4.660000e-83 318
19 TraesCS2D01G514600 chr2A 84.416 154 15 5 1322 1469 738202644 738202794 3.010000e-30 143
20 TraesCS2D01G514600 chr4D 86.335 161 19 2 619 778 461492128 461492286 3.840000e-39 172
21 TraesCS2D01G514600 chr7D 86.395 147 16 4 619 764 400447848 400447705 1.080000e-34 158
22 TraesCS2D01G514600 chr7D 84.906 159 19 4 619 775 591271830 591271985 3.870000e-34 156
23 TraesCS2D01G514600 chr6A 86.897 145 13 5 619 760 595172915 595173056 1.080000e-34 158
24 TraesCS2D01G514600 chrUn 84.472 161 20 5 619 778 86324884 86324728 1.390000e-33 154
25 TraesCS2D01G514600 chr3D 83.951 162 22 3 619 779 54369041 54369199 5.000000e-33 152
26 TraesCS2D01G514600 chr3D 91.011 89 8 0 537 625 423260164 423260076 1.410000e-23 121
27 TraesCS2D01G514600 chr1A 84.277 159 22 2 622 779 500078880 500078724 5.000000e-33 152
28 TraesCS2D01G514600 chr1A 83.951 162 21 4 619 778 352138224 352138382 1.800000e-32 150
29 TraesCS2D01G514600 chr1A 86.667 105 12 2 518 622 57637114 57637216 6.560000e-22 115
30 TraesCS2D01G514600 chr4B 92.941 85 6 0 538 622 640017275 640017359 1.090000e-24 124
31 TraesCS2D01G514600 chr4B 89.362 94 9 1 532 625 204335849 204335757 1.830000e-22 117
32 TraesCS2D01G514600 chr3B 92.941 85 6 0 538 622 65214056 65214140 1.090000e-24 124


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G514600 chr2D 606553692 606556590 2898 False 5354.000000 5354 100.000000 1 2899 1 chr2D.!!$F3 2898
1 TraesCS2D01G514600 chr2D 606596643 606598456 1813 False 226.000000 442 81.212333 1070 2898 3 chr2D.!!$F5 1828
2 TraesCS2D01G514600 chr2B 737688678 737694590 5912 False 588.500000 726 87.908000 1023 2899 4 chr2B.!!$F3 1876
3 TraesCS2D01G514600 chr2A 738052232 738056181 3949 False 464.666667 715 92.156000 1 2899 3 chr2A.!!$F3 2898

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
302 648 0.170561 GCGCCTCTGTCTTCGACTAA 59.829 55.0 0.0 0.0 33.15 2.24 F
1040 2591 0.034477 CCCTTGGGATAACGGCAAGT 60.034 55.0 0.0 0.0 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1162 2714 0.108851 GGTTATGCTTTTGCCGGTGG 60.109 55.0 1.9 0.0 46.87 4.61 R
1935 3914 0.315251 GGCTTGTTTGGAACTGCTCC 59.685 55.0 0.0 0.0 45.64 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.610232 ACATTCCAGGAGCCAAGTGC 60.610 55.000 0.00 0.00 41.71 4.40
40 41 1.066605 GCGCGGAGTATAGGACAAGAA 59.933 52.381 8.83 0.00 0.00 2.52
45 46 4.683832 CGGAGTATAGGACAAGAACAAGG 58.316 47.826 0.00 0.00 0.00 3.61
68 69 6.937465 AGGAGAAGAACAAAGATAAAGACACC 59.063 38.462 0.00 0.00 0.00 4.16
87 88 2.514582 ACCGAGGAGGATCTAAAGGAGA 59.485 50.000 0.00 0.00 45.00 3.71
120 121 7.268199 TCATATCTGGAAATGAACATGAAGC 57.732 36.000 0.00 0.00 0.00 3.86
183 184 6.239887 GGTGGAGGCTAATATTTGATAGTCCA 60.240 42.308 0.77 4.10 0.00 4.02
196 197 0.602638 TAGTCCAAAGGCTGCACACG 60.603 55.000 0.50 0.00 0.00 4.49
211 212 2.420022 GCACACGGATGCATTTCTAGTT 59.580 45.455 0.00 0.00 45.39 2.24
212 213 3.728864 GCACACGGATGCATTTCTAGTTG 60.729 47.826 0.00 0.00 45.39 3.16
213 214 2.420022 ACACGGATGCATTTCTAGTTGC 59.580 45.455 0.00 7.74 39.33 4.17
238 584 9.077885 GCAAGGGTTTTTATGATATTGGAGATA 57.922 33.333 0.00 0.00 0.00 1.98
256 602 5.230306 GGAGATATCGTCTTTGTTCAGAACG 59.770 44.000 8.80 0.00 37.29 3.95
269 615 1.827344 TCAGAACGAGGCACATCTGAT 59.173 47.619 11.53 0.00 42.36 2.90
272 618 0.745845 AACGAGGCACATCTGATGGC 60.746 55.000 20.83 18.91 42.75 4.40
273 619 2.242572 CGAGGCACATCTGATGGCG 61.243 63.158 20.83 12.65 46.73 5.69
293 639 4.228567 GGCCTAGGCGCCTCTGTC 62.229 72.222 36.73 23.41 46.10 3.51
294 640 3.151022 GCCTAGGCGCCTCTGTCT 61.151 66.667 36.73 11.27 0.00 3.41
295 641 2.726351 GCCTAGGCGCCTCTGTCTT 61.726 63.158 36.73 10.36 0.00 3.01
296 642 1.439644 CCTAGGCGCCTCTGTCTTC 59.560 63.158 36.73 0.00 0.00 2.87
297 643 1.064946 CTAGGCGCCTCTGTCTTCG 59.935 63.158 36.73 8.33 0.00 3.79
298 644 1.377366 CTAGGCGCCTCTGTCTTCGA 61.377 60.000 36.73 11.47 0.00 3.71
299 645 1.654954 TAGGCGCCTCTGTCTTCGAC 61.655 60.000 36.73 0.00 0.00 4.20
300 646 2.569134 GCGCCTCTGTCTTCGACT 59.431 61.111 0.00 0.00 33.15 4.18
301 647 1.654954 GGCGCCTCTGTCTTCGACTA 61.655 60.000 22.15 0.00 33.15 2.59
302 648 0.170561 GCGCCTCTGTCTTCGACTAA 59.829 55.000 0.00 0.00 33.15 2.24
303 649 1.795889 GCGCCTCTGTCTTCGACTAAG 60.796 57.143 0.00 0.00 36.45 2.18
304 650 1.738350 CGCCTCTGTCTTCGACTAAGA 59.262 52.381 0.00 0.00 42.07 2.10
305 651 2.356382 CGCCTCTGTCTTCGACTAAGAT 59.644 50.000 0.00 0.00 45.84 2.40
306 652 3.701241 GCCTCTGTCTTCGACTAAGATG 58.299 50.000 0.00 0.00 45.84 2.90
307 653 3.378742 GCCTCTGTCTTCGACTAAGATGA 59.621 47.826 0.00 0.00 45.84 2.92
308 654 4.037446 GCCTCTGTCTTCGACTAAGATGAT 59.963 45.833 0.00 0.00 45.84 2.45
309 655 5.518812 CCTCTGTCTTCGACTAAGATGATG 58.481 45.833 0.00 0.00 45.84 3.07
310 656 5.067153 CCTCTGTCTTCGACTAAGATGATGT 59.933 44.000 0.00 0.00 45.84 3.06
324 670 1.825090 TGATGTGCCTTTGGTAGCTG 58.175 50.000 0.00 0.00 0.00 4.24
331 677 2.105821 TGCCTTTGGTAGCTGTTAGTGT 59.894 45.455 0.00 0.00 0.00 3.55
382 728 9.474313 AACTAAGCTTATATGGTTTTGAATCCA 57.526 29.630 6.64 0.00 38.14 3.41
445 792 6.174451 GTTAAAGAAACCGTACCCTGATTC 57.826 41.667 0.00 0.00 31.38 2.52
451 800 6.171213 AGAAACCGTACCCTGATTCTAAAAG 58.829 40.000 0.00 0.00 0.00 2.27
468 820 7.956420 TCTAAAAGAAACATATGTGACACGT 57.044 32.000 9.63 5.47 0.00 4.49
521 874 8.027189 GGGTCCAAATTTGACTCTGTATTTAAC 58.973 37.037 19.86 0.00 0.00 2.01
616 1206 9.620660 AAACGCTTTTATATTTCTGTACAAAGG 57.379 29.630 0.00 0.00 0.00 3.11
617 1207 7.758495 ACGCTTTTATATTTCTGTACAAAGGG 58.242 34.615 11.45 11.45 38.18 3.95
618 1208 7.608761 ACGCTTTTATATTTCTGTACAAAGGGA 59.391 33.333 17.09 1.20 36.64 4.20
619 1209 8.122952 CGCTTTTATATTTCTGTACAAAGGGAG 58.877 37.037 8.66 0.00 35.72 4.30
620 1210 8.957466 GCTTTTATATTTCTGTACAAAGGGAGT 58.043 33.333 0.00 0.00 0.00 3.85
626 1216 9.726438 ATATTTCTGTACAAAGGGAGTATATGC 57.274 33.333 0.00 0.00 0.00 3.14
627 1217 6.808321 TTCTGTACAAAGGGAGTATATGCT 57.192 37.500 0.00 0.00 0.00 3.79
628 1218 7.907841 TTCTGTACAAAGGGAGTATATGCTA 57.092 36.000 0.00 0.00 0.00 3.49
629 1219 7.286215 TCTGTACAAAGGGAGTATATGCTAC 57.714 40.000 0.00 0.00 0.00 3.58
630 1220 6.837048 TCTGTACAAAGGGAGTATATGCTACA 59.163 38.462 5.32 0.00 0.00 2.74
631 1221 6.812998 TGTACAAAGGGAGTATATGCTACAC 58.187 40.000 5.32 0.00 0.00 2.90
632 1222 5.950544 ACAAAGGGAGTATATGCTACACA 57.049 39.130 5.32 0.00 0.00 3.72
633 1223 6.308015 ACAAAGGGAGTATATGCTACACAA 57.692 37.500 5.32 0.00 0.00 3.33
634 1224 6.717289 ACAAAGGGAGTATATGCTACACAAA 58.283 36.000 5.32 0.00 0.00 2.83
635 1225 6.823689 ACAAAGGGAGTATATGCTACACAAAG 59.176 38.462 5.32 0.00 0.00 2.77
636 1226 6.561519 AAGGGAGTATATGCTACACAAAGT 57.438 37.500 5.32 0.00 0.00 2.66
637 1227 7.670605 AAGGGAGTATATGCTACACAAAGTA 57.329 36.000 5.32 0.00 0.00 2.24
638 1228 7.857404 AGGGAGTATATGCTACACAAAGTAT 57.143 36.000 5.32 0.00 30.93 2.12
639 1229 8.951614 AGGGAGTATATGCTACACAAAGTATA 57.048 34.615 5.32 0.00 30.93 1.47
640 1230 9.548631 AGGGAGTATATGCTACACAAAGTATAT 57.451 33.333 5.32 0.00 38.09 0.86
740 1683 9.947433 AAAATAATGATCAAATTTTGGCTCAGA 57.053 25.926 21.96 6.09 32.93 3.27
746 1689 9.947433 ATGATCAAATTTTGGCTCAGAATAAAA 57.053 25.926 9.18 0.00 0.00 1.52
748 1691 8.782339 ATCAAATTTTGGCTCAGAATAAAAGG 57.218 30.769 9.18 0.00 0.00 3.11
757 1729 4.692777 GCTCAGAATAAAAGGGGCCCTAAT 60.693 45.833 29.08 20.24 31.13 1.73
762 1734 6.041637 CAGAATAAAAGGGGCCCTAATAAACC 59.958 42.308 29.08 12.73 31.13 3.27
764 1736 0.554305 AAGGGGCCCTAATAAACCCG 59.446 55.000 29.08 0.00 46.10 5.28
780 1752 2.877975 CCGAACGGAGGGAGTAAGA 58.122 57.895 7.53 0.00 37.50 2.10
781 1753 1.180029 CCGAACGGAGGGAGTAAGAA 58.820 55.000 7.53 0.00 37.50 2.52
783 1755 2.416972 CCGAACGGAGGGAGTAAGAAAG 60.417 54.545 7.53 0.00 37.50 2.62
784 1756 2.490903 CGAACGGAGGGAGTAAGAAAGA 59.509 50.000 0.00 0.00 0.00 2.52
785 1757 3.057033 CGAACGGAGGGAGTAAGAAAGAA 60.057 47.826 0.00 0.00 0.00 2.52
786 1758 4.496360 GAACGGAGGGAGTAAGAAAGAAG 58.504 47.826 0.00 0.00 0.00 2.85
788 1760 2.418884 CGGAGGGAGTAAGAAAGAAGGC 60.419 54.545 0.00 0.00 0.00 4.35
790 1762 2.841266 GAGGGAGTAAGAAAGAAGGCCT 59.159 50.000 0.00 0.00 0.00 5.19
791 1763 4.031611 GAGGGAGTAAGAAAGAAGGCCTA 58.968 47.826 5.16 0.00 0.00 3.93
793 1765 3.518303 GGGAGTAAGAAAGAAGGCCTACA 59.482 47.826 5.16 0.00 0.00 2.74
794 1766 4.505808 GGAGTAAGAAAGAAGGCCTACAC 58.494 47.826 5.16 0.17 0.00 2.90
796 1768 2.474410 AAGAAAGAAGGCCTACACCG 57.526 50.000 5.16 0.00 33.69 4.94
797 1769 0.613777 AGAAAGAAGGCCTACACCGG 59.386 55.000 5.16 0.00 33.69 5.28
798 1770 0.392595 GAAAGAAGGCCTACACCGGG 60.393 60.000 5.16 0.00 33.69 5.73
804 1776 4.382320 GCCTACACCGGGCGTTGA 62.382 66.667 6.32 0.00 40.19 3.18
806 1778 1.078708 CCTACACCGGGCGTTGAAT 60.079 57.895 6.32 0.00 0.00 2.57
807 1779 0.675522 CCTACACCGGGCGTTGAATT 60.676 55.000 6.32 0.00 0.00 2.17
808 1780 1.405797 CCTACACCGGGCGTTGAATTA 60.406 52.381 6.32 0.00 0.00 1.40
811 1783 1.470890 ACACCGGGCGTTGAATTAATG 59.529 47.619 6.32 0.00 0.00 1.90
812 1784 1.740585 CACCGGGCGTTGAATTAATGA 59.259 47.619 6.32 0.00 0.00 2.57
813 1785 1.741145 ACCGGGCGTTGAATTAATGAC 59.259 47.619 6.32 0.00 32.15 3.06
815 1787 2.477189 CCGGGCGTTGAATTAATGACAC 60.477 50.000 0.00 0.00 34.81 3.67
817 1789 2.752903 GGGCGTTGAATTAATGACACCT 59.247 45.455 0.00 0.00 34.81 4.00
818 1790 3.427503 GGGCGTTGAATTAATGACACCTG 60.428 47.826 0.00 0.00 34.81 4.00
820 1792 3.119849 GCGTTGAATTAATGACACCTGCT 60.120 43.478 0.00 0.00 0.00 4.24
822 1794 4.853196 CGTTGAATTAATGACACCTGCTTG 59.147 41.667 0.00 0.00 0.00 4.01
824 1796 6.348132 CGTTGAATTAATGACACCTGCTTGTA 60.348 38.462 0.00 0.00 0.00 2.41
826 1798 5.123820 TGAATTAATGACACCTGCTTGTAGC 59.876 40.000 0.00 0.00 42.82 3.58
843 1815 6.398234 TTGTAGCACTCTCTCTAATCATCC 57.602 41.667 0.00 0.00 0.00 3.51
844 1816 4.830046 TGTAGCACTCTCTCTAATCATCCC 59.170 45.833 0.00 0.00 0.00 3.85
845 1817 4.197559 AGCACTCTCTCTAATCATCCCT 57.802 45.455 0.00 0.00 0.00 4.20
846 1818 4.151883 AGCACTCTCTCTAATCATCCCTC 58.848 47.826 0.00 0.00 0.00 4.30
847 1819 4.140947 AGCACTCTCTCTAATCATCCCTCT 60.141 45.833 0.00 0.00 0.00 3.69
848 1820 4.588528 GCACTCTCTCTAATCATCCCTCTT 59.411 45.833 0.00 0.00 0.00 2.85
849 1821 5.509501 GCACTCTCTCTAATCATCCCTCTTG 60.510 48.000 0.00 0.00 0.00 3.02
850 1822 4.588528 ACTCTCTCTAATCATCCCTCTTGC 59.411 45.833 0.00 0.00 0.00 4.01
852 1824 3.645212 CTCTCTAATCATCCCTCTTGCCA 59.355 47.826 0.00 0.00 0.00 4.92
853 1825 3.389329 TCTCTAATCATCCCTCTTGCCAC 59.611 47.826 0.00 0.00 0.00 5.01
854 1826 3.387962 TCTAATCATCCCTCTTGCCACT 58.612 45.455 0.00 0.00 0.00 4.00
855 1827 3.782523 TCTAATCATCCCTCTTGCCACTT 59.217 43.478 0.00 0.00 0.00 3.16
857 1829 1.067295 TCATCCCTCTTGCCACTTGT 58.933 50.000 0.00 0.00 0.00 3.16
858 1830 1.425066 TCATCCCTCTTGCCACTTGTT 59.575 47.619 0.00 0.00 0.00 2.83
859 1831 1.542915 CATCCCTCTTGCCACTTGTTG 59.457 52.381 0.00 0.00 0.00 3.33
860 1832 0.823356 TCCCTCTTGCCACTTGTTGC 60.823 55.000 0.00 0.00 0.00 4.17
861 1833 1.662044 CCTCTTGCCACTTGTTGCC 59.338 57.895 0.00 0.00 0.00 4.52
862 1834 0.825010 CCTCTTGCCACTTGTTGCCT 60.825 55.000 0.00 0.00 0.00 4.75
864 1836 1.165907 TCTTGCCACTTGTTGCCTCG 61.166 55.000 0.00 0.00 0.00 4.63
876 2299 7.174946 CCACTTGTTGCCTCGGAAATATATATT 59.825 37.037 1.91 1.91 0.00 1.28
878 2301 9.131791 ACTTGTTGCCTCGGAAATATATATTTT 57.868 29.630 19.30 6.13 36.13 1.82
899 2322 6.713762 TTTTTGCCTCGGAAATATGATCAT 57.286 33.333 13.81 13.81 0.00 2.45
900 2323 6.713762 TTTTGCCTCGGAAATATGATCATT 57.286 33.333 14.65 0.00 0.00 2.57
902 2325 5.694231 TGCCTCGGAAATATGATCATTTG 57.306 39.130 14.65 0.00 0.00 2.32
906 2329 7.094677 TGCCTCGGAAATATGATCATTTGTATG 60.095 37.037 14.65 1.15 0.00 2.39
907 2330 7.246311 CCTCGGAAATATGATCATTTGTATGC 58.754 38.462 14.65 1.54 0.00 3.14
908 2331 7.120285 CCTCGGAAATATGATCATTTGTATGCT 59.880 37.037 14.65 0.00 0.00 3.79
909 2332 9.154847 CTCGGAAATATGATCATTTGTATGCTA 57.845 33.333 14.65 0.00 0.00 3.49
910 2333 9.154847 TCGGAAATATGATCATTTGTATGCTAG 57.845 33.333 14.65 0.00 0.00 3.42
911 2334 8.939929 CGGAAATATGATCATTTGTATGCTAGT 58.060 33.333 14.65 0.00 0.00 2.57
949 2500 5.043737 TGGGGGTAGTCTAAATATGTTGC 57.956 43.478 0.00 0.00 0.00 4.17
950 2501 4.724798 TGGGGGTAGTCTAAATATGTTGCT 59.275 41.667 0.00 0.00 0.00 3.91
954 2505 6.038271 GGGGTAGTCTAAATATGTTGCTGTTG 59.962 42.308 0.00 0.00 0.00 3.33
956 2507 6.821665 GGTAGTCTAAATATGTTGCTGTTGGA 59.178 38.462 0.00 0.00 0.00 3.53
958 2509 7.759489 AGTCTAAATATGTTGCTGTTGGAAA 57.241 32.000 0.00 0.00 0.00 3.13
959 2510 8.177119 AGTCTAAATATGTTGCTGTTGGAAAA 57.823 30.769 0.00 0.00 0.00 2.29
999 2550 5.616488 TTTTGCGTGAAGGAAATAGTACC 57.384 39.130 0.00 0.00 39.88 3.34
1020 2571 9.535170 AGTACCATATATATATCCCCGATTCAG 57.465 37.037 2.03 0.00 0.00 3.02
1021 2572 7.246171 ACCATATATATATCCCCGATTCAGC 57.754 40.000 2.03 0.00 0.00 4.26
1022 2573 6.213600 ACCATATATATATCCCCGATTCAGCC 59.786 42.308 2.03 0.00 0.00 4.85
1023 2574 6.352222 CCATATATATATCCCCGATTCAGCCC 60.352 46.154 2.03 0.00 0.00 5.19
1024 2575 2.642171 TATATCCCCGATTCAGCCCT 57.358 50.000 0.00 0.00 0.00 5.19
1025 2576 1.747444 ATATCCCCGATTCAGCCCTT 58.253 50.000 0.00 0.00 0.00 3.95
1026 2577 0.764890 TATCCCCGATTCAGCCCTTG 59.235 55.000 0.00 0.00 0.00 3.61
1027 2578 1.999634 ATCCCCGATTCAGCCCTTGG 62.000 60.000 0.00 0.00 0.00 3.61
1031 2582 0.764890 CCGATTCAGCCCTTGGGATA 59.235 55.000 10.36 0.00 0.00 2.59
1032 2583 1.142870 CCGATTCAGCCCTTGGGATAA 59.857 52.381 10.36 0.27 0.00 1.75
1033 2584 2.222027 CGATTCAGCCCTTGGGATAAC 58.778 52.381 10.36 0.00 0.00 1.89
1034 2585 2.222027 GATTCAGCCCTTGGGATAACG 58.778 52.381 10.36 0.00 0.00 3.18
1035 2586 0.254747 TTCAGCCCTTGGGATAACGG 59.745 55.000 10.36 0.00 0.00 4.44
1036 2587 1.823899 CAGCCCTTGGGATAACGGC 60.824 63.158 10.36 0.00 40.03 5.68
1038 2589 1.379309 GCCCTTGGGATAACGGCAA 60.379 57.895 10.36 0.00 39.50 4.52
1039 2590 1.384222 GCCCTTGGGATAACGGCAAG 61.384 60.000 10.36 0.00 39.50 4.01
1040 2591 0.034477 CCCTTGGGATAACGGCAAGT 60.034 55.000 0.00 0.00 0.00 3.16
1041 2592 1.379527 CCTTGGGATAACGGCAAGTC 58.620 55.000 0.00 0.00 0.00 3.01
1042 2593 1.006832 CTTGGGATAACGGCAAGTCG 58.993 55.000 0.00 0.00 0.00 4.18
1043 2594 0.609151 TTGGGATAACGGCAAGTCGA 59.391 50.000 0.00 0.00 0.00 4.20
1044 2595 0.174845 TGGGATAACGGCAAGTCGAG 59.825 55.000 0.00 0.00 0.00 4.04
1045 2596 0.458669 GGGATAACGGCAAGTCGAGA 59.541 55.000 0.00 0.00 0.00 4.04
1046 2597 1.557651 GGATAACGGCAAGTCGAGAC 58.442 55.000 0.00 0.00 0.00 3.36
1047 2598 1.189403 GATAACGGCAAGTCGAGACG 58.811 55.000 0.00 0.00 36.20 4.18
1048 2599 0.524862 ATAACGGCAAGTCGAGACGT 59.475 50.000 0.00 0.00 39.74 4.34
1049 2600 0.110056 TAACGGCAAGTCGAGACGTC 60.110 55.000 7.70 7.70 36.69 4.34
1050 2601 2.067091 AACGGCAAGTCGAGACGTCA 62.067 55.000 19.50 0.00 36.69 4.35
1051 2602 1.154016 CGGCAAGTCGAGACGTCAT 60.154 57.895 19.50 2.45 36.20 3.06
1052 2603 1.406219 CGGCAAGTCGAGACGTCATG 61.406 60.000 19.50 9.59 36.20 3.07
1057 2608 0.598562 AGTCGAGACGTCATGTTGCT 59.401 50.000 19.50 5.02 36.20 3.91
1058 2609 0.985549 GTCGAGACGTCATGTTGCTC 59.014 55.000 19.50 3.39 0.00 4.26
1059 2610 0.596082 TCGAGACGTCATGTTGCTCA 59.404 50.000 19.50 0.00 0.00 4.26
1060 2611 1.202348 TCGAGACGTCATGTTGCTCAT 59.798 47.619 19.50 0.00 37.22 2.90
1061 2612 2.422127 TCGAGACGTCATGTTGCTCATA 59.578 45.455 19.50 0.00 34.67 2.15
1062 2613 3.119637 TCGAGACGTCATGTTGCTCATAA 60.120 43.478 19.50 0.00 34.67 1.90
1063 2614 3.241553 CGAGACGTCATGTTGCTCATAAG 59.758 47.826 19.50 0.00 34.67 1.73
1064 2615 4.177026 GAGACGTCATGTTGCTCATAAGT 58.823 43.478 19.50 0.00 34.67 2.24
1065 2616 4.177026 AGACGTCATGTTGCTCATAAGTC 58.823 43.478 19.50 11.66 34.67 3.01
1066 2617 3.925379 ACGTCATGTTGCTCATAAGTCA 58.075 40.909 0.00 0.00 34.67 3.41
1067 2618 4.507710 ACGTCATGTTGCTCATAAGTCAT 58.492 39.130 0.00 0.00 34.67 3.06
1068 2619 4.568359 ACGTCATGTTGCTCATAAGTCATC 59.432 41.667 0.00 0.00 34.67 2.92
1075 2626 4.492494 TGCTCATAAGTCATCACCATGT 57.508 40.909 0.00 0.00 0.00 3.21
1076 2627 4.445453 TGCTCATAAGTCATCACCATGTC 58.555 43.478 0.00 0.00 0.00 3.06
1082 2633 6.554605 TCATAAGTCATCACCATGTCTATCCA 59.445 38.462 0.00 0.00 29.33 3.41
1084 2635 3.645212 AGTCATCACCATGTCTATCCAGG 59.355 47.826 0.00 0.00 0.00 4.45
1088 2639 3.724478 TCACCATGTCTATCCAGGTTCT 58.276 45.455 0.00 0.00 0.00 3.01
1094 2645 2.291346 TGTCTATCCAGGTTCTCCGTCA 60.291 50.000 0.00 0.00 39.05 4.35
1096 2647 1.409427 CTATCCAGGTTCTCCGTCACC 59.591 57.143 0.00 0.00 39.05 4.02
1097 2648 1.265454 ATCCAGGTTCTCCGTCACCC 61.265 60.000 0.00 0.00 39.05 4.61
1127 2679 5.410439 GCAACTAGAATAAAAGGTCGTTCCA 59.590 40.000 0.00 0.00 39.02 3.53
1147 2699 4.035102 GGAAGGCCGCAACCTCCT 62.035 66.667 0.00 0.00 39.93 3.69
1148 2700 2.436824 GAAGGCCGCAACCTCCTC 60.437 66.667 0.00 0.00 39.93 3.71
1149 2701 2.930562 AAGGCCGCAACCTCCTCT 60.931 61.111 0.00 0.00 39.93 3.69
1150 2702 2.860972 GAAGGCCGCAACCTCCTCTC 62.861 65.000 0.00 0.00 39.93 3.20
1151 2703 3.394836 GGCCGCAACCTCCTCTCT 61.395 66.667 0.00 0.00 0.00 3.10
1152 2704 2.185608 GCCGCAACCTCCTCTCTC 59.814 66.667 0.00 0.00 0.00 3.20
1153 2705 2.650116 GCCGCAACCTCCTCTCTCA 61.650 63.158 0.00 0.00 0.00 3.27
1154 2706 1.216710 CCGCAACCTCCTCTCTCAC 59.783 63.158 0.00 0.00 0.00 3.51
1155 2707 1.216710 CGCAACCTCCTCTCTCACC 59.783 63.158 0.00 0.00 0.00 4.02
1156 2708 1.599576 GCAACCTCCTCTCTCACCC 59.400 63.158 0.00 0.00 0.00 4.61
1157 2709 1.893786 CAACCTCCTCTCTCACCCG 59.106 63.158 0.00 0.00 0.00 5.28
1158 2710 1.985116 AACCTCCTCTCTCACCCGC 60.985 63.158 0.00 0.00 0.00 6.13
1159 2711 3.151022 CCTCCTCTCTCACCCGCC 61.151 72.222 0.00 0.00 0.00 6.13
1160 2712 2.363018 CTCCTCTCTCACCCGCCA 60.363 66.667 0.00 0.00 0.00 5.69
1161 2713 2.363018 TCCTCTCTCACCCGCCAG 60.363 66.667 0.00 0.00 0.00 4.85
1162 2714 4.154347 CCTCTCTCACCCGCCAGC 62.154 72.222 0.00 0.00 0.00 4.85
1163 2715 4.154347 CTCTCTCACCCGCCAGCC 62.154 72.222 0.00 0.00 0.00 4.85
1223 2792 2.623889 CCGAACCAACCCAACACATTTA 59.376 45.455 0.00 0.00 0.00 1.40
1269 2843 4.513519 CGCAAACGCAGGGAGATA 57.486 55.556 0.00 0.00 0.00 1.98
1288 2862 3.071206 TCAGCGTCTCAGGGCTCC 61.071 66.667 0.00 0.00 37.41 4.70
1315 2889 3.866582 GGATCCACCTCCTGGCGG 61.867 72.222 6.95 0.00 40.39 6.13
1482 3056 4.813526 CGCGACGACCACGAGGAG 62.814 72.222 5.68 1.57 42.66 3.69
1484 3058 2.745100 CGACGACCACGAGGAGGA 60.745 66.667 5.68 0.00 42.66 3.71
1485 3059 2.751913 CGACGACCACGAGGAGGAG 61.752 68.421 5.68 0.00 42.66 3.69
1486 3060 2.361357 ACGACCACGAGGAGGAGG 60.361 66.667 5.68 0.00 42.66 4.30
1487 3061 3.827898 CGACCACGAGGAGGAGGC 61.828 72.222 5.68 0.00 42.66 4.70
1488 3062 3.462678 GACCACGAGGAGGAGGCC 61.463 72.222 5.68 0.00 38.69 5.19
1489 3063 4.316823 ACCACGAGGAGGAGGCCA 62.317 66.667 5.01 0.00 38.69 5.36
1669 3263 1.511305 GACCGGCTGATTCTGTCGA 59.489 57.895 17.62 0.00 32.46 4.20
1677 3271 4.557496 CGGCTGATTCTGTCGAGATTGATA 60.557 45.833 11.56 0.00 32.46 2.15
1695 3289 3.507233 TGATAGCTTTGTTTTGCTCCAGG 59.493 43.478 0.00 0.00 40.35 4.45
1696 3290 1.043022 AGCTTTGTTTTGCTCCAGGG 58.957 50.000 0.00 0.00 33.90 4.45
1697 3291 0.033920 GCTTTGTTTTGCTCCAGGGG 59.966 55.000 0.00 0.00 0.00 4.79
1698 3292 1.413118 CTTTGTTTTGCTCCAGGGGT 58.587 50.000 0.00 0.00 0.00 4.95
1699 3293 2.593026 CTTTGTTTTGCTCCAGGGGTA 58.407 47.619 0.00 0.00 0.00 3.69
1700 3294 1.989706 TTGTTTTGCTCCAGGGGTAC 58.010 50.000 0.00 0.00 0.00 3.34
1703 3297 0.696501 TTTTGCTCCAGGGGTACTCC 59.303 55.000 2.47 2.47 0.00 3.85
1734 3328 6.699575 TTTTATGAAGCTCTTTAGGGATGC 57.300 37.500 0.00 0.00 0.00 3.91
1735 3329 5.636903 TTATGAAGCTCTTTAGGGATGCT 57.363 39.130 0.00 0.00 35.30 3.79
1736 3330 4.516652 ATGAAGCTCTTTAGGGATGCTT 57.483 40.909 0.00 0.00 45.15 3.91
1740 3334 4.307032 AGCTCTTTAGGGATGCTTCAAA 57.693 40.909 1.64 0.00 0.00 2.69
1742 3336 5.079643 AGCTCTTTAGGGATGCTTCAAAAA 58.920 37.500 1.64 0.00 0.00 1.94
1766 3745 2.962421 CTCTAGAAGCTAGAGTTGGGGG 59.038 54.545 18.75 0.00 37.02 5.40
1767 3746 2.585900 TCTAGAAGCTAGAGTTGGGGGA 59.414 50.000 0.00 0.00 0.00 4.81
1769 3748 2.632537 AGAAGCTAGAGTTGGGGGAAA 58.367 47.619 0.00 0.00 0.00 3.13
1772 3751 4.044698 AGAAGCTAGAGTTGGGGGAAAATT 59.955 41.667 0.00 0.00 0.00 1.82
1773 3752 3.701664 AGCTAGAGTTGGGGGAAAATTG 58.298 45.455 0.00 0.00 0.00 2.32
1774 3753 2.166459 GCTAGAGTTGGGGGAAAATTGC 59.834 50.000 0.00 0.00 0.00 3.56
1775 3754 1.644509 AGAGTTGGGGGAAAATTGCC 58.355 50.000 0.00 0.00 38.05 4.52
1776 3755 1.149923 AGAGTTGGGGGAAAATTGCCT 59.850 47.619 3.63 0.00 38.90 4.75
1777 3756 2.381961 AGAGTTGGGGGAAAATTGCCTA 59.618 45.455 3.63 0.00 38.90 3.93
1778 3757 2.496070 GAGTTGGGGGAAAATTGCCTAC 59.504 50.000 3.63 0.97 38.90 3.18
1779 3758 1.553248 GTTGGGGGAAAATTGCCTACC 59.447 52.381 3.63 1.59 38.90 3.18
1781 3760 1.191535 GGGGGAAAATTGCCTACCAC 58.808 55.000 3.63 0.00 38.90 4.16
1782 3761 1.273041 GGGGGAAAATTGCCTACCACT 60.273 52.381 3.63 0.00 38.90 4.00
1783 3762 1.824852 GGGGAAAATTGCCTACCACTG 59.175 52.381 3.63 0.00 38.90 3.66
1784 3763 1.204704 GGGAAAATTGCCTACCACTGC 59.795 52.381 0.00 0.00 35.55 4.40
1785 3764 1.204704 GGAAAATTGCCTACCACTGCC 59.795 52.381 0.00 0.00 0.00 4.85
1786 3765 1.892474 GAAAATTGCCTACCACTGCCA 59.108 47.619 0.00 0.00 0.00 4.92
1787 3766 1.256812 AAATTGCCTACCACTGCCAC 58.743 50.000 0.00 0.00 0.00 5.01
1788 3767 0.405585 AATTGCCTACCACTGCCACT 59.594 50.000 0.00 0.00 0.00 4.00
1789 3768 1.285280 ATTGCCTACCACTGCCACTA 58.715 50.000 0.00 0.00 0.00 2.74
1790 3769 0.613260 TTGCCTACCACTGCCACTAG 59.387 55.000 0.00 0.00 0.00 2.57
1791 3770 0.544357 TGCCTACCACTGCCACTAGT 60.544 55.000 0.00 0.00 0.00 2.57
1792 3771 1.272816 TGCCTACCACTGCCACTAGTA 60.273 52.381 0.00 0.00 0.00 1.82
1793 3772 1.829222 GCCTACCACTGCCACTAGTAA 59.171 52.381 0.00 0.00 0.00 2.24
1795 3774 3.097614 CCTACCACTGCCACTAGTAAGT 58.902 50.000 0.00 0.00 35.91 2.24
1809 3788 6.051179 ACTAGTAAGTGAATCCTTTCCACC 57.949 41.667 0.00 0.00 33.57 4.61
1810 3789 4.993705 AGTAAGTGAATCCTTTCCACCA 57.006 40.909 0.00 0.00 0.00 4.17
1812 3791 5.701224 AGTAAGTGAATCCTTTCCACCAAA 58.299 37.500 0.00 0.00 0.00 3.28
1813 3792 6.314917 AGTAAGTGAATCCTTTCCACCAAAT 58.685 36.000 0.00 0.00 0.00 2.32
1814 3793 6.782494 AGTAAGTGAATCCTTTCCACCAAATT 59.218 34.615 0.00 0.00 0.00 1.82
1815 3794 6.499106 AAGTGAATCCTTTCCACCAAATTT 57.501 33.333 0.00 0.00 0.00 1.82
1817 3796 5.012046 AGTGAATCCTTTCCACCAAATTTCC 59.988 40.000 0.00 0.00 0.00 3.13
1818 3797 4.285775 TGAATCCTTTCCACCAAATTTCCC 59.714 41.667 0.00 0.00 0.00 3.97
1819 3798 3.336509 TCCTTTCCACCAAATTTCCCA 57.663 42.857 0.00 0.00 0.00 4.37
1820 3799 3.868062 TCCTTTCCACCAAATTTCCCAT 58.132 40.909 0.00 0.00 0.00 4.00
1822 3801 4.285775 TCCTTTCCACCAAATTTCCCATTC 59.714 41.667 0.00 0.00 0.00 2.67
1823 3802 4.565444 CCTTTCCACCAAATTTCCCATTCC 60.565 45.833 0.00 0.00 0.00 3.01
1824 3803 3.558608 TCCACCAAATTTCCCATTCCT 57.441 42.857 0.00 0.00 0.00 3.36
1825 3804 3.172339 TCCACCAAATTTCCCATTCCTG 58.828 45.455 0.00 0.00 0.00 3.86
1826 3805 3.172339 CCACCAAATTTCCCATTCCTGA 58.828 45.455 0.00 0.00 0.00 3.86
1827 3806 3.582208 CCACCAAATTTCCCATTCCTGAA 59.418 43.478 0.00 0.00 0.00 3.02
1828 3807 4.322953 CCACCAAATTTCCCATTCCTGAAG 60.323 45.833 0.00 0.00 0.00 3.02
1829 3808 3.261643 ACCAAATTTCCCATTCCTGAAGC 59.738 43.478 0.00 0.00 0.00 3.86
1830 3809 3.516700 CCAAATTTCCCATTCCTGAAGCT 59.483 43.478 0.00 0.00 0.00 3.74
1832 3811 5.187576 CCAAATTTCCCATTCCTGAAGCTAA 59.812 40.000 0.00 0.00 0.00 3.09
1833 3812 6.295802 CCAAATTTCCCATTCCTGAAGCTAAA 60.296 38.462 0.00 0.00 0.00 1.85
1835 3814 5.722021 TTTCCCATTCCTGAAGCTAAAAC 57.278 39.130 0.00 0.00 0.00 2.43
1836 3815 4.657814 TCCCATTCCTGAAGCTAAAACT 57.342 40.909 0.00 0.00 0.00 2.66
1840 3819 6.158695 TCCCATTCCTGAAGCTAAAACTAGAT 59.841 38.462 0.00 0.00 0.00 1.98
1842 3821 6.261826 CCATTCCTGAAGCTAAAACTAGATGG 59.738 42.308 0.00 0.00 0.00 3.51
1844 3823 6.620877 TCCTGAAGCTAAAACTAGATGGAA 57.379 37.500 0.00 0.00 0.00 3.53
1845 3824 6.644347 TCCTGAAGCTAAAACTAGATGGAAG 58.356 40.000 0.00 0.00 0.00 3.46
1846 3825 5.295540 CCTGAAGCTAAAACTAGATGGAAGC 59.704 44.000 0.00 0.00 0.00 3.86
1847 3826 5.186198 TGAAGCTAAAACTAGATGGAAGCC 58.814 41.667 0.00 0.00 0.00 4.35
1848 3827 4.844349 AGCTAAAACTAGATGGAAGCCA 57.156 40.909 0.00 0.00 38.19 4.75
1849 3828 5.179452 AGCTAAAACTAGATGGAAGCCAA 57.821 39.130 0.00 0.00 36.95 4.52
1851 3830 5.416013 AGCTAAAACTAGATGGAAGCCAAAC 59.584 40.000 0.00 0.00 36.95 2.93
1852 3831 5.183140 GCTAAAACTAGATGGAAGCCAAACA 59.817 40.000 0.00 0.00 36.95 2.83
1853 3832 6.127619 GCTAAAACTAGATGGAAGCCAAACAT 60.128 38.462 0.00 0.00 36.95 2.71
1854 3833 7.067008 GCTAAAACTAGATGGAAGCCAAACATA 59.933 37.037 0.00 0.00 36.95 2.29
1855 3834 7.961326 AAAACTAGATGGAAGCCAAACATAT 57.039 32.000 0.00 0.00 36.95 1.78
1856 3835 7.961326 AAACTAGATGGAAGCCAAACATATT 57.039 32.000 0.00 0.00 36.95 1.28
1858 3837 6.904626 ACTAGATGGAAGCCAAACATATTCT 58.095 36.000 0.00 0.00 36.95 2.40
1859 3838 6.995091 ACTAGATGGAAGCCAAACATATTCTC 59.005 38.462 0.00 0.00 36.95 2.87
1860 3839 6.011122 AGATGGAAGCCAAACATATTCTCT 57.989 37.500 0.00 0.00 36.95 3.10
1863 3842 6.271488 TGGAAGCCAAACATATTCTCTTTG 57.729 37.500 0.00 0.00 0.00 2.77
1864 3843 5.185635 TGGAAGCCAAACATATTCTCTTTGG 59.814 40.000 4.35 4.35 44.65 3.28
1865 3844 5.185828 GGAAGCCAAACATATTCTCTTTGGT 59.814 40.000 9.52 0.00 44.00 3.67
1866 3845 6.377146 GGAAGCCAAACATATTCTCTTTGGTA 59.623 38.462 9.52 0.00 44.00 3.25
1867 3846 7.396540 AAGCCAAACATATTCTCTTTGGTAG 57.603 36.000 9.52 0.00 44.00 3.18
1868 3847 6.485171 AGCCAAACATATTCTCTTTGGTAGT 58.515 36.000 9.52 0.00 44.00 2.73
1869 3848 6.375455 AGCCAAACATATTCTCTTTGGTAGTG 59.625 38.462 9.52 0.00 44.00 2.74
1871 3850 6.250819 CAAACATATTCTCTTTGGTAGTGCG 58.749 40.000 0.00 0.00 0.00 5.34
1872 3851 5.339008 ACATATTCTCTTTGGTAGTGCGA 57.661 39.130 0.00 0.00 0.00 5.10
1873 3852 5.109903 ACATATTCTCTTTGGTAGTGCGAC 58.890 41.667 0.00 0.00 0.00 5.19
1874 3853 3.678056 ATTCTCTTTGGTAGTGCGACA 57.322 42.857 0.00 0.00 0.00 4.35
1875 3854 3.462483 TTCTCTTTGGTAGTGCGACAA 57.538 42.857 0.00 0.00 0.00 3.18
1876 3855 2.750948 TCTCTTTGGTAGTGCGACAAC 58.249 47.619 0.00 0.00 0.00 3.32
1877 3856 2.364324 TCTCTTTGGTAGTGCGACAACT 59.636 45.455 0.00 0.00 0.00 3.16
1878 3857 3.131396 CTCTTTGGTAGTGCGACAACTT 58.869 45.455 0.00 0.00 0.00 2.66
1879 3858 3.128349 TCTTTGGTAGTGCGACAACTTC 58.872 45.455 0.00 0.00 0.00 3.01
1880 3859 2.902705 TTGGTAGTGCGACAACTTCT 57.097 45.000 0.00 0.00 0.00 2.85
1881 3860 2.902705 TGGTAGTGCGACAACTTCTT 57.097 45.000 0.00 0.00 0.00 2.52
1882 3861 3.188159 TGGTAGTGCGACAACTTCTTT 57.812 42.857 0.00 0.00 0.00 2.52
1883 3862 4.325028 TGGTAGTGCGACAACTTCTTTA 57.675 40.909 0.00 0.00 0.00 1.85
1884 3863 4.890088 TGGTAGTGCGACAACTTCTTTAT 58.110 39.130 0.00 0.00 0.00 1.40
1885 3864 4.688879 TGGTAGTGCGACAACTTCTTTATG 59.311 41.667 0.00 0.00 0.00 1.90
1886 3865 4.927425 GGTAGTGCGACAACTTCTTTATGA 59.073 41.667 0.00 0.00 0.00 2.15
1887 3866 5.407387 GGTAGTGCGACAACTTCTTTATGAA 59.593 40.000 0.00 0.00 0.00 2.57
1888 3867 6.073440 GGTAGTGCGACAACTTCTTTATGAAA 60.073 38.462 0.00 0.00 33.79 2.69
1889 3868 5.748592 AGTGCGACAACTTCTTTATGAAAC 58.251 37.500 0.00 0.00 33.79 2.78
1890 3869 5.527582 AGTGCGACAACTTCTTTATGAAACT 59.472 36.000 0.00 0.00 33.79 2.66
1891 3870 5.621228 GTGCGACAACTTCTTTATGAAACTG 59.379 40.000 0.00 0.00 33.79 3.16
1892 3871 4.613031 GCGACAACTTCTTTATGAAACTGC 59.387 41.667 0.00 0.00 33.79 4.40
1893 3872 5.560953 GCGACAACTTCTTTATGAAACTGCT 60.561 40.000 0.00 0.00 33.79 4.24
1894 3873 6.074005 CGACAACTTCTTTATGAAACTGCTC 58.926 40.000 0.00 0.00 33.79 4.26
1895 3874 6.319141 ACAACTTCTTTATGAAACTGCTCC 57.681 37.500 0.00 0.00 33.79 4.70
1896 3875 5.827797 ACAACTTCTTTATGAAACTGCTCCA 59.172 36.000 0.00 0.00 33.79 3.86
1897 3876 6.321181 ACAACTTCTTTATGAAACTGCTCCAA 59.679 34.615 0.00 0.00 33.79 3.53
1898 3877 6.959639 ACTTCTTTATGAAACTGCTCCAAA 57.040 33.333 0.00 0.00 33.79 3.28
1899 3878 7.346751 ACTTCTTTATGAAACTGCTCCAAAA 57.653 32.000 0.00 0.00 33.79 2.44
1900 3879 7.955918 ACTTCTTTATGAAACTGCTCCAAAAT 58.044 30.769 0.00 0.00 33.79 1.82
1901 3880 9.077885 ACTTCTTTATGAAACTGCTCCAAAATA 57.922 29.630 0.00 0.00 33.79 1.40
1902 3881 9.912634 CTTCTTTATGAAACTGCTCCAAAATAA 57.087 29.630 0.00 0.00 33.79 1.40
1936 3915 6.617289 GTGAAACTGATTTTGATTAAGCGG 57.383 37.500 0.00 0.00 0.00 5.52
1937 3916 6.378582 GTGAAACTGATTTTGATTAAGCGGA 58.621 36.000 0.00 0.00 0.00 5.54
1938 3917 6.524586 GTGAAACTGATTTTGATTAAGCGGAG 59.475 38.462 0.00 0.00 0.00 4.63
1953 3932 3.873805 GGAGCAGTTCCAAACAAGC 57.126 52.632 0.00 0.00 46.01 4.01
1954 3933 0.315251 GGAGCAGTTCCAAACAAGCC 59.685 55.000 0.00 0.00 46.01 4.35
1955 3934 1.032014 GAGCAGTTCCAAACAAGCCA 58.968 50.000 0.00 0.00 35.95 4.75
2022 4001 5.212532 TGGCAAAATGTATTGAGCAACTT 57.787 34.783 0.00 0.00 31.84 2.66
2028 4007 9.573133 GCAAAATGTATTGAGCAACTTATAGTT 57.427 29.630 0.00 0.00 33.79 2.24
2036 4015 8.668510 ATTGAGCAACTTATAGTTCATAGGTG 57.331 34.615 0.00 0.00 36.03 4.00
2039 4020 8.486210 TGAGCAACTTATAGTTCATAGGTGAAT 58.514 33.333 0.00 0.00 45.46 2.57
2086 4067 3.359950 AGGCTGCTAAAAGATTCAAGGG 58.640 45.455 0.00 0.00 0.00 3.95
2106 4087 3.438360 GGTTTTGCTCTTGTTGACTGTG 58.562 45.455 0.00 0.00 0.00 3.66
2107 4088 3.438360 GTTTTGCTCTTGTTGACTGTGG 58.562 45.455 0.00 0.00 0.00 4.17
2115 4096 4.555709 TTGACTGTGGCGCGGGTT 62.556 61.111 8.83 0.00 0.00 4.11
2116 4097 4.980805 TGACTGTGGCGCGGGTTC 62.981 66.667 8.83 1.10 0.00 3.62
2142 4132 1.949525 ACTGTTCAGCGCAATTTGTCT 59.050 42.857 11.47 0.00 0.00 3.41
2205 4196 5.372373 AGATGGCCTAACTTCTTAGCATTC 58.628 41.667 3.32 0.00 0.00 2.67
2210 4201 4.209495 GCCTAACTTCTTAGCATTCGTAGC 59.791 45.833 0.00 0.00 0.00 3.58
2213 4204 4.720649 ACTTCTTAGCATTCGTAGCAGA 57.279 40.909 0.00 0.00 0.00 4.26
2254 4245 2.876091 CTCGAACTTATGAGCGAACCA 58.124 47.619 0.00 0.00 31.89 3.67
2271 4262 8.677148 AGCGAACCATGTATTTCTAATTACAT 57.323 30.769 5.01 5.01 39.11 2.29
2292 4283 6.725246 ACATAAAATACAATTGCTCTACCGC 58.275 36.000 5.05 0.00 0.00 5.68
2301 4292 1.006102 GCTCTACCGCACACACACT 60.006 57.895 0.00 0.00 0.00 3.55
2317 4322 5.861251 ACACACACTATTGTTGTTGTTGTTG 59.139 36.000 0.00 0.00 31.66 3.33
2365 4370 5.124776 GGACCGGTGTAATTTCAATCAATGA 59.875 40.000 14.63 0.00 35.85 2.57
2368 4374 5.356751 CCGGTGTAATTTCAATCAATGAGGA 59.643 40.000 0.00 0.00 39.77 3.71
2372 4378 9.956720 GGTGTAATTTCAATCAATGAGGATAAG 57.043 33.333 0.00 0.00 39.77 1.73
2386 4392 6.500684 TGAGGATAAGAAAAATGTGACAGC 57.499 37.500 0.00 0.00 0.00 4.40
2387 4393 5.415701 TGAGGATAAGAAAAATGTGACAGCC 59.584 40.000 0.00 0.00 0.00 4.85
2388 4394 4.396166 AGGATAAGAAAAATGTGACAGCCG 59.604 41.667 0.00 0.00 0.00 5.52
2464 5081 5.063944 ACATATCACGTTGCTTTGATCTGAC 59.936 40.000 0.00 0.00 34.28 3.51
2484 5106 5.376625 TGACAACTTCAGCTTGTCCTTATT 58.623 37.500 11.90 0.00 44.71 1.40
2534 5156 2.169352 ACTACATCATGGACAGACAGCC 59.831 50.000 0.00 0.00 0.00 4.85
2559 5181 3.078097 TGCGTAAAAGCCTAGCAAATCA 58.922 40.909 0.00 0.00 34.66 2.57
2787 6660 4.323417 TGCTCCAACGTCTCAAATACAAT 58.677 39.130 0.00 0.00 0.00 2.71
2826 6707 2.027192 TCAGTTCACTTCCTATGGCACC 60.027 50.000 0.00 0.00 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.651240 CGCACTTGGCTCCTGGAATG 61.651 60.000 0.00 0.00 41.67 2.67
11 12 2.907897 ATACTCCGCGCACTTGGCTC 62.908 60.000 8.75 0.00 41.67 4.70
14 15 0.597637 CCTATACTCCGCGCACTTGG 60.598 60.000 8.75 0.00 0.00 3.61
21 22 2.098607 TGTTCTTGTCCTATACTCCGCG 59.901 50.000 0.00 0.00 0.00 6.46
25 26 6.777213 TCTCCTTGTTCTTGTCCTATACTC 57.223 41.667 0.00 0.00 0.00 2.59
40 41 7.993183 TGTCTTTATCTTTGTTCTTCTCCTTGT 59.007 33.333 0.00 0.00 0.00 3.16
45 46 6.645415 TCGGTGTCTTTATCTTTGTTCTTCTC 59.355 38.462 0.00 0.00 0.00 2.87
68 69 3.153919 CCTCTCCTTTAGATCCTCCTCG 58.846 54.545 0.00 0.00 32.41 4.63
104 105 2.562298 TGGTGGCTTCATGTTCATTTCC 59.438 45.455 0.00 0.00 0.00 3.13
120 121 1.228124 TCACTTTCGCCCTTGGTGG 60.228 57.895 0.00 0.00 33.43 4.61
183 184 2.629656 GCATCCGTGTGCAGCCTTT 61.630 57.895 4.58 0.00 44.43 3.11
211 212 6.894654 TCTCCAATATCATAAAAACCCTTGCA 59.105 34.615 0.00 0.00 0.00 4.08
212 213 7.346751 TCTCCAATATCATAAAAACCCTTGC 57.653 36.000 0.00 0.00 0.00 4.01
215 216 9.672673 CGATATCTCCAATATCATAAAAACCCT 57.327 33.333 0.34 0.00 32.09 4.34
238 584 3.318017 CCTCGTTCTGAACAAAGACGAT 58.682 45.455 19.56 0.00 32.93 3.73
256 602 2.541120 GCGCCATCAGATGTGCCTC 61.541 63.158 9.64 3.25 0.00 4.70
293 639 4.052159 AGGCACATCATCTTAGTCGAAG 57.948 45.455 0.00 0.00 36.38 3.79
294 640 4.471904 AAGGCACATCATCTTAGTCGAA 57.528 40.909 0.00 0.00 0.00 3.71
295 641 4.183865 CAAAGGCACATCATCTTAGTCGA 58.816 43.478 0.00 0.00 0.00 4.20
296 642 3.310774 CCAAAGGCACATCATCTTAGTCG 59.689 47.826 0.00 0.00 0.00 4.18
297 643 4.265073 ACCAAAGGCACATCATCTTAGTC 58.735 43.478 0.00 0.00 0.00 2.59
298 644 4.307032 ACCAAAGGCACATCATCTTAGT 57.693 40.909 0.00 0.00 0.00 2.24
299 645 4.274459 GCTACCAAAGGCACATCATCTTAG 59.726 45.833 0.00 0.00 0.00 2.18
300 646 4.080356 AGCTACCAAAGGCACATCATCTTA 60.080 41.667 0.00 0.00 0.00 2.10
301 647 3.019564 GCTACCAAAGGCACATCATCTT 58.980 45.455 0.00 0.00 0.00 2.40
302 648 2.240667 AGCTACCAAAGGCACATCATCT 59.759 45.455 0.00 0.00 0.00 2.90
303 649 2.357009 CAGCTACCAAAGGCACATCATC 59.643 50.000 0.00 0.00 0.00 2.92
304 650 2.291153 ACAGCTACCAAAGGCACATCAT 60.291 45.455 0.00 0.00 0.00 2.45
305 651 1.073763 ACAGCTACCAAAGGCACATCA 59.926 47.619 0.00 0.00 0.00 3.07
306 652 1.826385 ACAGCTACCAAAGGCACATC 58.174 50.000 0.00 0.00 0.00 3.06
307 653 2.292828 AACAGCTACCAAAGGCACAT 57.707 45.000 0.00 0.00 0.00 3.21
308 654 2.105821 ACTAACAGCTACCAAAGGCACA 59.894 45.455 0.00 0.00 0.00 4.57
309 655 2.484264 CACTAACAGCTACCAAAGGCAC 59.516 50.000 0.00 0.00 0.00 5.01
310 656 2.105821 ACACTAACAGCTACCAAAGGCA 59.894 45.455 0.00 0.00 0.00 4.75
324 670 1.026584 ACCGGCAAAACCACACTAAC 58.973 50.000 0.00 0.00 39.03 2.34
331 677 5.723672 TTATGAAATAACCGGCAAAACCA 57.276 34.783 0.00 0.00 33.55 3.67
431 778 5.750352 TTCTTTTAGAATCAGGGTACGGT 57.250 39.130 0.00 0.00 0.00 4.83
443 790 8.279800 CACGTGTCACATATGTTTCTTTTAGAA 58.720 33.333 5.37 0.00 31.28 2.10
444 791 7.654116 TCACGTGTCACATATGTTTCTTTTAGA 59.346 33.333 16.51 0.00 0.00 2.10
445 792 7.740346 GTCACGTGTCACATATGTTTCTTTTAG 59.260 37.037 16.51 0.00 0.00 1.85
451 800 5.591643 AAGTCACGTGTCACATATGTTTC 57.408 39.130 16.51 2.94 0.00 2.78
477 829 1.289530 CCCAAATACAAGGGGGCCTAA 59.710 52.381 0.84 0.00 41.58 2.69
591 944 8.241367 CCCTTTGTACAGAAATATAAAAGCGTT 58.759 33.333 0.00 0.00 0.00 4.84
601 1191 8.934697 AGCATATACTCCCTTTGTACAGAAATA 58.065 33.333 0.00 0.00 0.00 1.40
602 1192 7.806180 AGCATATACTCCCTTTGTACAGAAAT 58.194 34.615 0.00 0.00 0.00 2.17
603 1193 7.195374 AGCATATACTCCCTTTGTACAGAAA 57.805 36.000 0.00 0.00 0.00 2.52
604 1194 6.808321 AGCATATACTCCCTTTGTACAGAA 57.192 37.500 0.00 0.00 0.00 3.02
605 1195 6.837048 TGTAGCATATACTCCCTTTGTACAGA 59.163 38.462 0.00 0.00 0.00 3.41
606 1196 6.924060 GTGTAGCATATACTCCCTTTGTACAG 59.076 42.308 0.00 0.00 29.21 2.74
607 1197 6.381707 TGTGTAGCATATACTCCCTTTGTACA 59.618 38.462 0.00 0.00 33.44 2.90
608 1198 6.812998 TGTGTAGCATATACTCCCTTTGTAC 58.187 40.000 0.00 0.00 33.44 2.90
609 1199 7.426606 TTGTGTAGCATATACTCCCTTTGTA 57.573 36.000 0.00 0.00 33.44 2.41
610 1200 5.950544 TGTGTAGCATATACTCCCTTTGT 57.049 39.130 0.00 0.00 33.44 2.83
611 1201 6.823689 ACTTTGTGTAGCATATACTCCCTTTG 59.176 38.462 0.00 0.00 33.44 2.77
612 1202 6.958767 ACTTTGTGTAGCATATACTCCCTTT 58.041 36.000 0.00 0.00 33.44 3.11
613 1203 6.561519 ACTTTGTGTAGCATATACTCCCTT 57.438 37.500 0.00 0.00 33.44 3.95
614 1204 7.857404 ATACTTTGTGTAGCATATACTCCCT 57.143 36.000 0.00 0.00 33.44 4.20
714 1321 9.947433 TCTGAGCCAAAATTTGATCATTATTTT 57.053 25.926 17.05 17.05 33.12 1.82
715 1322 9.947433 TTCTGAGCCAAAATTTGATCATTATTT 57.053 25.926 7.37 3.45 0.00 1.40
719 1326 9.947433 TTTATTCTGAGCCAAAATTTGATCATT 57.053 25.926 7.37 2.99 0.00 2.57
720 1327 9.947433 TTTTATTCTGAGCCAAAATTTGATCAT 57.053 25.926 7.37 0.24 0.00 2.45
721 1328 9.426837 CTTTTATTCTGAGCCAAAATTTGATCA 57.573 29.630 7.37 9.79 0.00 2.92
722 1329 8.876790 CCTTTTATTCTGAGCCAAAATTTGATC 58.123 33.333 7.37 5.72 0.00 2.92
724 1331 7.160726 CCCTTTTATTCTGAGCCAAAATTTGA 58.839 34.615 7.37 0.00 0.00 2.69
725 1332 6.372381 CCCCTTTTATTCTGAGCCAAAATTTG 59.628 38.462 0.00 0.00 0.00 2.32
727 1334 5.571454 GCCCCTTTTATTCTGAGCCAAAATT 60.571 40.000 0.00 0.00 0.00 1.82
728 1335 4.080919 GCCCCTTTTATTCTGAGCCAAAAT 60.081 41.667 0.00 0.00 0.00 1.82
729 1336 3.260632 GCCCCTTTTATTCTGAGCCAAAA 59.739 43.478 0.00 0.00 0.00 2.44
730 1337 2.831526 GCCCCTTTTATTCTGAGCCAAA 59.168 45.455 0.00 0.00 0.00 3.28
731 1338 2.456577 GCCCCTTTTATTCTGAGCCAA 58.543 47.619 0.00 0.00 0.00 4.52
732 1339 1.341976 GGCCCCTTTTATTCTGAGCCA 60.342 52.381 0.00 0.00 39.01 4.75
733 1340 1.403814 GGCCCCTTTTATTCTGAGCC 58.596 55.000 0.00 0.00 0.00 4.70
734 1341 1.063642 AGGGCCCCTTTTATTCTGAGC 60.064 52.381 21.43 0.00 0.00 4.26
735 1342 4.519906 TTAGGGCCCCTTTTATTCTGAG 57.480 45.455 21.43 0.00 34.61 3.35
740 1683 5.221303 GGGTTTATTAGGGCCCCTTTTATT 58.779 41.667 21.43 0.00 34.61 1.40
742 1685 3.372892 CGGGTTTATTAGGGCCCCTTTTA 60.373 47.826 21.43 0.00 37.89 1.52
746 1689 0.327770 TCGGGTTTATTAGGGCCCCT 60.328 55.000 21.43 7.84 37.89 4.79
748 1691 1.683943 GTTCGGGTTTATTAGGGCCC 58.316 55.000 16.46 16.46 37.79 5.80
757 1729 0.542702 ACTCCCTCCGTTCGGGTTTA 60.543 55.000 11.37 0.00 42.56 2.01
762 1734 1.180029 TTCTTACTCCCTCCGTTCGG 58.820 55.000 4.74 4.74 0.00 4.30
764 1736 4.496360 CTTCTTTCTTACTCCCTCCGTTC 58.504 47.826 0.00 0.00 0.00 3.95
773 1745 4.505808 GGTGTAGGCCTTCTTTCTTACTC 58.494 47.826 12.58 0.45 0.00 2.59
774 1746 3.056035 CGGTGTAGGCCTTCTTTCTTACT 60.056 47.826 12.58 0.00 0.00 2.24
776 1748 2.235402 CCGGTGTAGGCCTTCTTTCTTA 59.765 50.000 12.58 0.00 0.00 2.10
777 1749 1.003233 CCGGTGTAGGCCTTCTTTCTT 59.997 52.381 12.58 0.00 0.00 2.52
778 1750 0.613777 CCGGTGTAGGCCTTCTTTCT 59.386 55.000 12.58 0.00 0.00 2.52
780 1752 1.683441 CCCGGTGTAGGCCTTCTTT 59.317 57.895 12.58 0.00 0.00 2.52
781 1753 2.967946 GCCCGGTGTAGGCCTTCTT 61.968 63.158 12.58 0.00 45.16 2.52
788 1760 0.675522 AATTCAACGCCCGGTGTAGG 60.676 55.000 3.47 0.09 33.88 3.18
790 1762 2.469274 TTAATTCAACGCCCGGTGTA 57.531 45.000 3.47 0.00 33.88 2.90
791 1763 1.470890 CATTAATTCAACGCCCGGTGT 59.529 47.619 5.56 0.00 33.88 4.16
793 1765 1.741145 GTCATTAATTCAACGCCCGGT 59.259 47.619 0.00 0.00 0.00 5.28
794 1766 1.740585 TGTCATTAATTCAACGCCCGG 59.259 47.619 0.00 0.00 0.00 5.73
796 1768 2.752903 AGGTGTCATTAATTCAACGCCC 59.247 45.455 16.07 6.91 42.06 6.13
797 1769 3.758300 CAGGTGTCATTAATTCAACGCC 58.242 45.455 13.47 13.47 41.55 5.68
798 1770 3.119849 AGCAGGTGTCATTAATTCAACGC 60.120 43.478 10.87 10.87 0.00 4.84
799 1771 4.685169 AGCAGGTGTCATTAATTCAACG 57.315 40.909 0.00 0.00 0.00 4.10
800 1772 5.772521 ACAAGCAGGTGTCATTAATTCAAC 58.227 37.500 0.00 0.00 0.00 3.18
801 1773 6.349280 GCTACAAGCAGGTGTCATTAATTCAA 60.349 38.462 0.00 0.00 41.89 2.69
802 1774 5.123820 GCTACAAGCAGGTGTCATTAATTCA 59.876 40.000 0.00 0.00 41.89 2.57
803 1775 5.573146 GCTACAAGCAGGTGTCATTAATTC 58.427 41.667 0.00 0.00 41.89 2.17
804 1776 5.567138 GCTACAAGCAGGTGTCATTAATT 57.433 39.130 0.00 0.00 41.89 1.40
818 1790 5.255710 TGATTAGAGAGAGTGCTACAAGC 57.744 43.478 0.00 0.00 42.82 4.01
820 1792 5.303078 GGGATGATTAGAGAGAGTGCTACAA 59.697 44.000 0.00 0.00 0.00 2.41
822 1794 5.076873 AGGGATGATTAGAGAGAGTGCTAC 58.923 45.833 0.00 0.00 0.00 3.58
824 1796 4.140947 AGAGGGATGATTAGAGAGAGTGCT 60.141 45.833 0.00 0.00 0.00 4.40
826 1798 5.509501 GCAAGAGGGATGATTAGAGAGAGTG 60.510 48.000 0.00 0.00 0.00 3.51
827 1799 4.588528 GCAAGAGGGATGATTAGAGAGAGT 59.411 45.833 0.00 0.00 0.00 3.24
829 1801 3.900601 GGCAAGAGGGATGATTAGAGAGA 59.099 47.826 0.00 0.00 0.00 3.10
831 1803 3.389329 GTGGCAAGAGGGATGATTAGAGA 59.611 47.826 0.00 0.00 0.00 3.10
832 1804 3.390639 AGTGGCAAGAGGGATGATTAGAG 59.609 47.826 0.00 0.00 0.00 2.43
835 1807 3.266772 ACAAGTGGCAAGAGGGATGATTA 59.733 43.478 0.00 0.00 0.00 1.75
836 1808 2.042162 ACAAGTGGCAAGAGGGATGATT 59.958 45.455 0.00 0.00 0.00 2.57
838 1810 1.067295 ACAAGTGGCAAGAGGGATGA 58.933 50.000 0.00 0.00 0.00 2.92
850 1822 1.247567 ATTTCCGAGGCAACAAGTGG 58.752 50.000 0.00 0.00 41.41 4.00
852 1824 8.691661 AAATATATATTTCCGAGGCAACAAGT 57.308 30.769 13.85 0.00 32.05 3.16
853 1825 9.965824 AAAAATATATATTTCCGAGGCAACAAG 57.034 29.630 18.72 0.00 35.00 3.16
876 2299 6.713762 ATGATCATATTTCCGAGGCAAAAA 57.286 33.333 6.36 0.00 0.00 1.94
878 2301 6.096705 ACAAATGATCATATTTCCGAGGCAAA 59.903 34.615 9.04 0.00 0.00 3.68
880 2303 5.132502 ACAAATGATCATATTTCCGAGGCA 58.867 37.500 9.04 0.00 0.00 4.75
881 2304 5.695851 ACAAATGATCATATTTCCGAGGC 57.304 39.130 9.04 0.00 0.00 4.70
882 2305 7.120285 AGCATACAAATGATCATATTTCCGAGG 59.880 37.037 9.04 0.00 34.84 4.63
883 2306 8.037382 AGCATACAAATGATCATATTTCCGAG 57.963 34.615 9.04 0.00 34.84 4.63
884 2307 7.984422 AGCATACAAATGATCATATTTCCGA 57.016 32.000 9.04 0.00 34.84 4.55
885 2308 8.939929 ACTAGCATACAAATGATCATATTTCCG 58.060 33.333 9.04 0.00 34.84 4.30
924 2347 6.378848 GCAACATATTTAGACTACCCCCAAAA 59.621 38.462 0.00 0.00 0.00 2.44
927 2350 4.724798 AGCAACATATTTAGACTACCCCCA 59.275 41.667 0.00 0.00 0.00 4.96
928 2351 5.063880 CAGCAACATATTTAGACTACCCCC 58.936 45.833 0.00 0.00 0.00 5.40
929 2352 5.681639 ACAGCAACATATTTAGACTACCCC 58.318 41.667 0.00 0.00 0.00 4.95
930 2353 6.038271 CCAACAGCAACATATTTAGACTACCC 59.962 42.308 0.00 0.00 0.00 3.69
931 2354 6.821665 TCCAACAGCAACATATTTAGACTACC 59.178 38.462 0.00 0.00 0.00 3.18
932 2355 7.843490 TCCAACAGCAACATATTTAGACTAC 57.157 36.000 0.00 0.00 0.00 2.73
933 2356 8.856153 TTTCCAACAGCAACATATTTAGACTA 57.144 30.769 0.00 0.00 0.00 2.59
934 2357 7.759489 TTTCCAACAGCAACATATTTAGACT 57.241 32.000 0.00 0.00 0.00 3.24
935 2358 8.810652 TTTTTCCAACAGCAACATATTTAGAC 57.189 30.769 0.00 0.00 0.00 2.59
978 2529 4.643463 TGGTACTATTTCCTTCACGCAAA 58.357 39.130 0.00 0.00 0.00 3.68
979 2530 4.274602 TGGTACTATTTCCTTCACGCAA 57.725 40.909 0.00 0.00 0.00 4.85
980 2531 3.965379 TGGTACTATTTCCTTCACGCA 57.035 42.857 0.00 0.00 0.00 5.24
994 2545 9.535170 CTGAATCGGGGATATATATATGGTACT 57.465 37.037 10.03 0.00 0.00 2.73
995 2546 8.251721 GCTGAATCGGGGATATATATATGGTAC 58.748 40.741 10.03 0.00 0.00 3.34
996 2547 7.399191 GGCTGAATCGGGGATATATATATGGTA 59.601 40.741 10.03 0.00 0.00 3.25
997 2548 6.213600 GGCTGAATCGGGGATATATATATGGT 59.786 42.308 10.03 0.00 0.00 3.55
998 2549 6.352222 GGGCTGAATCGGGGATATATATATGG 60.352 46.154 10.03 0.00 0.00 2.74
999 2550 6.441924 AGGGCTGAATCGGGGATATATATATG 59.558 42.308 10.03 0.00 0.00 1.78
1012 2563 0.764890 TATCCCAAGGGCTGAATCGG 59.235 55.000 0.00 0.00 34.68 4.18
1013 2564 2.222027 GTTATCCCAAGGGCTGAATCG 58.778 52.381 0.00 0.00 34.68 3.34
1014 2565 2.222027 CGTTATCCCAAGGGCTGAATC 58.778 52.381 0.00 0.00 34.68 2.52
1015 2566 1.133792 CCGTTATCCCAAGGGCTGAAT 60.134 52.381 0.00 0.00 34.68 2.57
1016 2567 0.254747 CCGTTATCCCAAGGGCTGAA 59.745 55.000 0.00 0.00 34.68 3.02
1017 2568 1.912220 CCGTTATCCCAAGGGCTGA 59.088 57.895 0.00 0.00 34.68 4.26
1019 2570 2.595655 GCCGTTATCCCAAGGGCT 59.404 61.111 12.22 0.00 45.05 5.19
1021 2572 0.034477 ACTTGCCGTTATCCCAAGGG 60.034 55.000 0.00 0.00 40.08 3.95
1022 2573 1.379527 GACTTGCCGTTATCCCAAGG 58.620 55.000 0.00 0.00 40.08 3.61
1023 2574 1.006832 CGACTTGCCGTTATCCCAAG 58.993 55.000 0.00 0.00 41.20 3.61
1024 2575 0.609151 TCGACTTGCCGTTATCCCAA 59.391 50.000 0.00 0.00 0.00 4.12
1025 2576 0.174845 CTCGACTTGCCGTTATCCCA 59.825 55.000 0.00 0.00 0.00 4.37
1026 2577 0.458669 TCTCGACTTGCCGTTATCCC 59.541 55.000 0.00 0.00 0.00 3.85
1027 2578 1.557651 GTCTCGACTTGCCGTTATCC 58.442 55.000 0.00 0.00 0.00 2.59
1031 2582 1.371389 GACGTCTCGACTTGCCGTT 60.371 57.895 8.70 0.00 0.00 4.44
1032 2583 1.863662 ATGACGTCTCGACTTGCCGT 61.864 55.000 17.92 0.00 0.00 5.68
1033 2584 1.154016 ATGACGTCTCGACTTGCCG 60.154 57.895 17.92 0.00 0.00 5.69
1034 2585 0.388649 ACATGACGTCTCGACTTGCC 60.389 55.000 17.92 0.00 32.46 4.52
1035 2586 1.125021 CAACATGACGTCTCGACTTGC 59.875 52.381 17.92 0.00 32.46 4.01
1036 2587 1.125021 GCAACATGACGTCTCGACTTG 59.875 52.381 17.92 11.37 34.42 3.16
1038 2589 0.598562 AGCAACATGACGTCTCGACT 59.401 50.000 17.92 3.97 0.00 4.18
1039 2590 0.985549 GAGCAACATGACGTCTCGAC 59.014 55.000 17.92 1.58 0.00 4.20
1040 2591 0.596082 TGAGCAACATGACGTCTCGA 59.404 50.000 17.92 0.00 0.00 4.04
1041 2592 1.633561 ATGAGCAACATGACGTCTCG 58.366 50.000 17.92 10.08 37.87 4.04
1042 2593 4.177026 ACTTATGAGCAACATGACGTCTC 58.823 43.478 17.92 4.41 39.77 3.36
1043 2594 4.177026 GACTTATGAGCAACATGACGTCT 58.823 43.478 17.92 0.00 39.77 4.18
1044 2595 3.926527 TGACTTATGAGCAACATGACGTC 59.073 43.478 9.11 9.11 39.77 4.34
1045 2596 3.925379 TGACTTATGAGCAACATGACGT 58.075 40.909 0.00 0.00 39.77 4.34
1046 2597 4.567959 TGATGACTTATGAGCAACATGACG 59.432 41.667 0.00 0.00 39.77 4.35
1047 2598 5.220739 GGTGATGACTTATGAGCAACATGAC 60.221 44.000 0.00 0.00 39.77 3.06
1048 2599 4.877823 GGTGATGACTTATGAGCAACATGA 59.122 41.667 0.00 0.00 39.77 3.07
1049 2600 4.637091 TGGTGATGACTTATGAGCAACATG 59.363 41.667 6.66 0.00 39.77 3.21
1050 2601 4.847198 TGGTGATGACTTATGAGCAACAT 58.153 39.130 2.31 2.31 42.39 2.71
1051 2602 4.284829 TGGTGATGACTTATGAGCAACA 57.715 40.909 0.00 0.00 27.35 3.33
1052 2603 4.637534 ACATGGTGATGACTTATGAGCAAC 59.362 41.667 0.00 0.00 34.17 4.17
1057 2608 6.554605 TGGATAGACATGGTGATGACTTATGA 59.445 38.462 0.00 0.00 36.26 2.15
1058 2609 6.762333 TGGATAGACATGGTGATGACTTATG 58.238 40.000 0.00 0.00 36.26 1.90
1059 2610 6.013898 CCTGGATAGACATGGTGATGACTTAT 60.014 42.308 0.00 0.00 36.26 1.73
1060 2611 5.305386 CCTGGATAGACATGGTGATGACTTA 59.695 44.000 0.00 0.00 36.26 2.24
1061 2612 4.102210 CCTGGATAGACATGGTGATGACTT 59.898 45.833 0.00 0.00 36.26 3.01
1062 2613 3.645212 CCTGGATAGACATGGTGATGACT 59.355 47.826 0.00 0.00 38.08 3.41
1063 2614 3.389329 ACCTGGATAGACATGGTGATGAC 59.611 47.826 0.00 0.00 33.36 3.06
1064 2615 3.657610 ACCTGGATAGACATGGTGATGA 58.342 45.455 0.00 0.00 33.36 2.92
1065 2616 4.102210 AGAACCTGGATAGACATGGTGATG 59.898 45.833 0.00 0.00 35.49 3.07
1066 2617 4.302067 AGAACCTGGATAGACATGGTGAT 58.698 43.478 0.00 0.00 0.00 3.06
1067 2618 3.706594 GAGAACCTGGATAGACATGGTGA 59.293 47.826 0.00 0.00 0.00 4.02
1068 2619 3.181461 GGAGAACCTGGATAGACATGGTG 60.181 52.174 0.00 0.00 0.00 4.17
1075 2626 2.376109 GTGACGGAGAACCTGGATAGA 58.624 52.381 0.00 0.00 0.00 1.98
1076 2627 1.409427 GGTGACGGAGAACCTGGATAG 59.591 57.143 0.00 0.00 35.51 2.08
1082 2633 2.995574 CGGGGTGACGGAGAACCT 60.996 66.667 0.00 0.00 37.77 3.50
1096 2647 1.149361 TTATTCTAGTTGCGCGCGGG 61.149 55.000 33.06 20.05 0.00 6.13
1097 2648 0.648441 TTTATTCTAGTTGCGCGCGG 59.352 50.000 33.06 13.92 0.00 6.46
1105 2656 6.171213 CCTGGAACGACCTTTTATTCTAGTT 58.829 40.000 0.00 0.00 39.86 2.24
1107 2658 5.116882 CCCTGGAACGACCTTTTATTCTAG 58.883 45.833 0.00 0.00 39.86 2.43
1108 2659 4.080751 CCCCTGGAACGACCTTTTATTCTA 60.081 45.833 0.00 0.00 39.86 2.10
1109 2660 3.308188 CCCCTGGAACGACCTTTTATTCT 60.308 47.826 0.00 0.00 39.86 2.40
1110 2661 3.014623 CCCCTGGAACGACCTTTTATTC 58.985 50.000 0.00 0.00 39.86 1.75
1111 2662 2.645797 TCCCCTGGAACGACCTTTTATT 59.354 45.455 0.00 0.00 39.86 1.40
1148 2700 4.767255 GTGGCTGGCGGGTGAGAG 62.767 72.222 0.00 0.00 0.00 3.20
1162 2714 0.108851 GGTTATGCTTTTGCCGGTGG 60.109 55.000 1.90 0.00 46.87 4.61
1163 2715 0.600557 TGGTTATGCTTTTGCCGGTG 59.399 50.000 1.90 0.00 46.87 4.94
1164 2716 0.601057 GTGGTTATGCTTTTGCCGGT 59.399 50.000 1.90 0.00 46.87 5.28
1223 2792 2.278857 CGACGGCGAGCTAGCAAT 60.279 61.111 20.82 7.46 40.82 3.56
1267 2841 0.396417 AGCCCTGAGACGCTGACTAT 60.396 55.000 0.00 0.00 32.98 2.12
1269 2843 2.283532 AGCCCTGAGACGCTGACT 60.284 61.111 0.00 0.00 32.98 3.41
1288 2862 4.626081 GTGGATCCCCATCGCCGG 62.626 72.222 9.90 0.00 45.68 6.13
1315 2889 3.414700 CACCTGCACGAAGGCGAC 61.415 66.667 0.00 0.00 41.46 5.19
1467 3041 2.745100 TCCTCCTCGTGGTCGTCG 60.745 66.667 2.99 0.00 38.33 5.12
1474 3048 4.154347 GCTGGCCTCCTCCTCGTG 62.154 72.222 3.32 0.00 0.00 4.35
1669 3263 5.477984 TGGAGCAAAACAAAGCTATCAATCT 59.522 36.000 0.00 0.00 42.04 2.40
1677 3271 1.043022 CCCTGGAGCAAAACAAAGCT 58.957 50.000 0.00 0.00 45.25 3.74
1710 3304 6.891908 AGCATCCCTAAAGAGCTTCATAAAAA 59.108 34.615 0.00 0.00 29.98 1.94
1712 3306 6.006275 AGCATCCCTAAAGAGCTTCATAAA 57.994 37.500 0.00 0.00 29.98 1.40
1713 3307 5.636903 AGCATCCCTAAAGAGCTTCATAA 57.363 39.130 0.00 0.00 29.98 1.90
1719 3313 4.307032 TTTGAAGCATCCCTAAAGAGCT 57.693 40.909 0.00 0.00 37.08 4.09
1720 3314 5.391312 TTTTTGAAGCATCCCTAAAGAGC 57.609 39.130 0.00 0.00 0.00 4.09
1745 3339 2.962421 CCCCCAACTCTAGCTTCTAGAG 59.038 54.545 22.50 22.50 44.87 2.43
1747 3341 3.033659 TCCCCCAACTCTAGCTTCTAG 57.966 52.381 0.00 0.00 0.00 2.43
1754 3733 2.760650 GGCAATTTTCCCCCAACTCTAG 59.239 50.000 0.00 0.00 0.00 2.43
1758 3737 2.536066 GTAGGCAATTTTCCCCCAACT 58.464 47.619 0.00 0.00 0.00 3.16
1762 3741 1.191535 GTGGTAGGCAATTTTCCCCC 58.808 55.000 0.00 0.00 0.00 5.40
1763 3742 1.824852 CAGTGGTAGGCAATTTTCCCC 59.175 52.381 0.00 0.00 0.00 4.81
1765 3744 1.204704 GGCAGTGGTAGGCAATTTTCC 59.795 52.381 0.00 0.00 0.00 3.13
1766 3745 1.892474 TGGCAGTGGTAGGCAATTTTC 59.108 47.619 0.00 0.00 38.71 2.29
1767 3746 1.618343 GTGGCAGTGGTAGGCAATTTT 59.382 47.619 0.00 0.00 43.50 1.82
1769 3748 0.405585 AGTGGCAGTGGTAGGCAATT 59.594 50.000 0.00 0.00 43.50 2.32
1772 3751 0.544357 ACTAGTGGCAGTGGTAGGCA 60.544 55.000 9.83 0.00 39.41 4.75
1773 3752 1.481871 TACTAGTGGCAGTGGTAGGC 58.518 55.000 13.80 0.00 0.00 3.93
1774 3753 3.097614 ACTTACTAGTGGCAGTGGTAGG 58.902 50.000 21.19 21.19 31.99 3.18
1775 3754 4.111375 CACTTACTAGTGGCAGTGGTAG 57.889 50.000 16.60 13.48 46.52 3.18
1786 3765 5.546499 TGGTGGAAAGGATTCACTTACTAGT 59.454 40.000 0.00 0.00 37.29 2.57
1787 3766 6.049955 TGGTGGAAAGGATTCACTTACTAG 57.950 41.667 0.00 0.00 37.29 2.57
1788 3767 6.442541 TTGGTGGAAAGGATTCACTTACTA 57.557 37.500 0.00 0.00 37.29 1.82
1789 3768 4.993705 TGGTGGAAAGGATTCACTTACT 57.006 40.909 0.00 0.00 37.29 2.24
1790 3769 6.590234 ATTTGGTGGAAAGGATTCACTTAC 57.410 37.500 0.00 0.00 37.29 2.34
1791 3770 7.256154 GGAAATTTGGTGGAAAGGATTCACTTA 60.256 37.037 0.00 0.00 37.29 2.24
1792 3771 6.464322 GGAAATTTGGTGGAAAGGATTCACTT 60.464 38.462 0.00 0.00 37.29 3.16
1793 3772 5.012046 GGAAATTTGGTGGAAAGGATTCACT 59.988 40.000 0.00 0.00 37.29 3.41
1795 3774 4.285775 GGGAAATTTGGTGGAAAGGATTCA 59.714 41.667 0.00 0.00 37.29 2.57
1797 3776 4.238669 TGGGAAATTTGGTGGAAAGGATT 58.761 39.130 0.00 0.00 0.00 3.01
1798 3777 3.868062 TGGGAAATTTGGTGGAAAGGAT 58.132 40.909 0.00 0.00 0.00 3.24
1799 3778 3.336509 TGGGAAATTTGGTGGAAAGGA 57.663 42.857 0.00 0.00 0.00 3.36
1800 3779 4.565444 GGAATGGGAAATTTGGTGGAAAGG 60.565 45.833 0.00 0.00 0.00 3.11
1803 3782 3.582208 CAGGAATGGGAAATTTGGTGGAA 59.418 43.478 0.00 0.00 0.00 3.53
1804 3783 3.172339 CAGGAATGGGAAATTTGGTGGA 58.828 45.455 0.00 0.00 0.00 4.02
1805 3784 3.172339 TCAGGAATGGGAAATTTGGTGG 58.828 45.455 0.00 0.00 0.00 4.61
1807 3786 3.261643 GCTTCAGGAATGGGAAATTTGGT 59.738 43.478 0.00 0.00 0.00 3.67
1808 3787 3.516700 AGCTTCAGGAATGGGAAATTTGG 59.483 43.478 0.00 0.00 0.00 3.28
1809 3788 4.813750 AGCTTCAGGAATGGGAAATTTG 57.186 40.909 0.00 0.00 0.00 2.32
1810 3789 6.933514 TTTAGCTTCAGGAATGGGAAATTT 57.066 33.333 0.00 0.00 0.00 1.82
1812 3791 6.019108 AGTTTTAGCTTCAGGAATGGGAAAT 58.981 36.000 0.00 0.00 0.00 2.17
1813 3792 5.393866 AGTTTTAGCTTCAGGAATGGGAAA 58.606 37.500 0.00 0.00 0.00 3.13
1814 3793 4.998051 AGTTTTAGCTTCAGGAATGGGAA 58.002 39.130 0.00 0.00 0.00 3.97
1815 3794 4.657814 AGTTTTAGCTTCAGGAATGGGA 57.342 40.909 0.00 0.00 0.00 4.37
1817 3796 6.261826 CCATCTAGTTTTAGCTTCAGGAATGG 59.738 42.308 0.00 0.00 0.00 3.16
1818 3797 7.050377 TCCATCTAGTTTTAGCTTCAGGAATG 58.950 38.462 0.00 0.00 0.00 2.67
1819 3798 7.200434 TCCATCTAGTTTTAGCTTCAGGAAT 57.800 36.000 0.00 0.00 0.00 3.01
1820 3799 6.620877 TCCATCTAGTTTTAGCTTCAGGAA 57.379 37.500 0.00 0.00 0.00 3.36
1822 3801 5.295540 GCTTCCATCTAGTTTTAGCTTCAGG 59.704 44.000 0.00 0.00 0.00 3.86
1823 3802 5.295540 GGCTTCCATCTAGTTTTAGCTTCAG 59.704 44.000 0.00 0.00 0.00 3.02
1824 3803 5.186198 GGCTTCCATCTAGTTTTAGCTTCA 58.814 41.667 0.00 0.00 0.00 3.02
1825 3804 5.186198 TGGCTTCCATCTAGTTTTAGCTTC 58.814 41.667 0.00 0.00 0.00 3.86
1826 3805 5.179452 TGGCTTCCATCTAGTTTTAGCTT 57.821 39.130 0.00 0.00 0.00 3.74
1827 3806 4.844349 TGGCTTCCATCTAGTTTTAGCT 57.156 40.909 0.00 0.00 0.00 3.32
1828 3807 5.183140 TGTTTGGCTTCCATCTAGTTTTAGC 59.817 40.000 0.00 0.00 31.53 3.09
1829 3808 6.817765 TGTTTGGCTTCCATCTAGTTTTAG 57.182 37.500 0.00 0.00 31.53 1.85
1830 3809 9.474313 AATATGTTTGGCTTCCATCTAGTTTTA 57.526 29.630 0.00 0.00 31.53 1.52
1832 3811 7.836183 AGAATATGTTTGGCTTCCATCTAGTTT 59.164 33.333 0.00 0.00 31.53 2.66
1833 3812 7.349598 AGAATATGTTTGGCTTCCATCTAGTT 58.650 34.615 0.00 0.00 31.53 2.24
1835 3814 7.222872 AGAGAATATGTTTGGCTTCCATCTAG 58.777 38.462 0.00 0.00 31.53 2.43
1836 3815 7.141758 AGAGAATATGTTTGGCTTCCATCTA 57.858 36.000 0.00 0.00 31.53 1.98
1840 3819 6.271488 CAAAGAGAATATGTTTGGCTTCCA 57.729 37.500 0.00 0.00 38.25 3.53
1847 3826 6.092122 TCGCACTACCAAAGAGAATATGTTTG 59.908 38.462 0.00 0.00 40.86 2.93
1848 3827 6.092259 GTCGCACTACCAAAGAGAATATGTTT 59.908 38.462 0.00 0.00 0.00 2.83
1849 3828 5.581085 GTCGCACTACCAAAGAGAATATGTT 59.419 40.000 0.00 0.00 0.00 2.71
1851 3830 5.109210 TGTCGCACTACCAAAGAGAATATG 58.891 41.667 0.00 0.00 0.00 1.78
1852 3831 5.339008 TGTCGCACTACCAAAGAGAATAT 57.661 39.130 0.00 0.00 0.00 1.28
1853 3832 4.794278 TGTCGCACTACCAAAGAGAATA 57.206 40.909 0.00 0.00 0.00 1.75
1854 3833 3.678056 TGTCGCACTACCAAAGAGAAT 57.322 42.857 0.00 0.00 0.00 2.40
1855 3834 3.128349 GTTGTCGCACTACCAAAGAGAA 58.872 45.455 0.00 0.00 0.00 2.87
1856 3835 2.364324 AGTTGTCGCACTACCAAAGAGA 59.636 45.455 0.00 0.00 0.00 3.10
1858 3837 2.902705 AGTTGTCGCACTACCAAAGA 57.097 45.000 0.00 0.00 0.00 2.52
1859 3838 3.131396 AGAAGTTGTCGCACTACCAAAG 58.869 45.455 0.00 0.00 0.00 2.77
1860 3839 3.188159 AGAAGTTGTCGCACTACCAAA 57.812 42.857 0.00 0.00 0.00 3.28
1863 3842 4.927425 TCATAAAGAAGTTGTCGCACTACC 59.073 41.667 0.00 0.00 0.00 3.18
1864 3843 6.462073 TTCATAAAGAAGTTGTCGCACTAC 57.538 37.500 0.00 0.00 0.00 2.73
1865 3844 6.704493 AGTTTCATAAAGAAGTTGTCGCACTA 59.296 34.615 0.00 0.00 37.57 2.74
1866 3845 5.527582 AGTTTCATAAAGAAGTTGTCGCACT 59.472 36.000 0.00 0.00 37.57 4.40
1867 3846 5.621228 CAGTTTCATAAAGAAGTTGTCGCAC 59.379 40.000 0.00 0.00 37.57 5.34
1868 3847 5.747565 CAGTTTCATAAAGAAGTTGTCGCA 58.252 37.500 0.00 0.00 37.57 5.10
1869 3848 4.613031 GCAGTTTCATAAAGAAGTTGTCGC 59.387 41.667 0.00 0.00 37.57 5.19
1871 3850 6.017109 TGGAGCAGTTTCATAAAGAAGTTGTC 60.017 38.462 0.00 0.00 37.57 3.18
1872 3851 5.827797 TGGAGCAGTTTCATAAAGAAGTTGT 59.172 36.000 0.00 0.00 37.57 3.32
1873 3852 6.317789 TGGAGCAGTTTCATAAAGAAGTTG 57.682 37.500 0.00 0.00 37.57 3.16
1874 3853 6.959639 TTGGAGCAGTTTCATAAAGAAGTT 57.040 33.333 0.00 0.00 37.57 2.66
1875 3854 6.959639 TTTGGAGCAGTTTCATAAAGAAGT 57.040 33.333 0.00 0.00 37.57 3.01
1876 3855 9.912634 TTATTTTGGAGCAGTTTCATAAAGAAG 57.087 29.630 0.00 0.00 37.57 2.85
1883 3862 8.992073 GTCAAATTTATTTTGGAGCAGTTTCAT 58.008 29.630 0.00 0.00 44.07 2.57
1884 3863 7.168972 CGTCAAATTTATTTTGGAGCAGTTTCA 59.831 33.333 0.00 0.00 44.07 2.69
1885 3864 7.359181 CCGTCAAATTTATTTTGGAGCAGTTTC 60.359 37.037 0.00 0.00 44.07 2.78
1886 3865 6.423604 CCGTCAAATTTATTTTGGAGCAGTTT 59.576 34.615 0.00 0.00 44.07 2.66
1887 3866 5.925969 CCGTCAAATTTATTTTGGAGCAGTT 59.074 36.000 0.00 0.00 44.07 3.16
1888 3867 5.242838 TCCGTCAAATTTATTTTGGAGCAGT 59.757 36.000 0.00 0.00 44.07 4.40
1889 3868 5.708948 TCCGTCAAATTTATTTTGGAGCAG 58.291 37.500 0.00 0.00 44.07 4.24
1890 3869 5.242838 ACTCCGTCAAATTTATTTTGGAGCA 59.757 36.000 18.56 0.00 44.07 4.26
1891 3870 5.572896 CACTCCGTCAAATTTATTTTGGAGC 59.427 40.000 18.56 0.00 44.07 4.70
1892 3871 6.908825 TCACTCCGTCAAATTTATTTTGGAG 58.091 36.000 17.74 17.74 44.07 3.86
1893 3872 6.885952 TCACTCCGTCAAATTTATTTTGGA 57.114 33.333 0.00 0.00 44.07 3.53
1894 3873 7.651704 AGTTTCACTCCGTCAAATTTATTTTGG 59.348 33.333 0.00 0.00 44.07 3.28
1895 3874 8.479280 CAGTTTCACTCCGTCAAATTTATTTTG 58.521 33.333 0.00 0.00 45.08 2.44
1896 3875 8.410141 TCAGTTTCACTCCGTCAAATTTATTTT 58.590 29.630 0.00 0.00 0.00 1.82
1897 3876 7.936584 TCAGTTTCACTCCGTCAAATTTATTT 58.063 30.769 0.00 0.00 0.00 1.40
1898 3877 7.504924 TCAGTTTCACTCCGTCAAATTTATT 57.495 32.000 0.00 0.00 0.00 1.40
1899 3878 7.687941 ATCAGTTTCACTCCGTCAAATTTAT 57.312 32.000 0.00 0.00 0.00 1.40
1900 3879 7.504924 AATCAGTTTCACTCCGTCAAATTTA 57.495 32.000 0.00 0.00 0.00 1.40
1901 3880 6.391227 AATCAGTTTCACTCCGTCAAATTT 57.609 33.333 0.00 0.00 0.00 1.82
1902 3881 6.391227 AAATCAGTTTCACTCCGTCAAATT 57.609 33.333 0.00 0.00 0.00 1.82
1903 3882 6.039270 TCAAAATCAGTTTCACTCCGTCAAAT 59.961 34.615 0.00 0.00 0.00 2.32
1904 3883 5.355630 TCAAAATCAGTTTCACTCCGTCAAA 59.644 36.000 0.00 0.00 0.00 2.69
1905 3884 4.878971 TCAAAATCAGTTTCACTCCGTCAA 59.121 37.500 0.00 0.00 0.00 3.18
1906 3885 4.447290 TCAAAATCAGTTTCACTCCGTCA 58.553 39.130 0.00 0.00 0.00 4.35
1907 3886 5.613358 ATCAAAATCAGTTTCACTCCGTC 57.387 39.130 0.00 0.00 0.00 4.79
1908 3887 7.504924 TTAATCAAAATCAGTTTCACTCCGT 57.495 32.000 0.00 0.00 0.00 4.69
1909 3888 6.524586 GCTTAATCAAAATCAGTTTCACTCCG 59.475 38.462 0.00 0.00 0.00 4.63
1910 3889 6.524586 CGCTTAATCAAAATCAGTTTCACTCC 59.475 38.462 0.00 0.00 0.00 3.85
1911 3890 6.524586 CCGCTTAATCAAAATCAGTTTCACTC 59.475 38.462 0.00 0.00 0.00 3.51
1912 3891 6.206634 TCCGCTTAATCAAAATCAGTTTCACT 59.793 34.615 0.00 0.00 0.00 3.41
1913 3892 6.378582 TCCGCTTAATCAAAATCAGTTTCAC 58.621 36.000 0.00 0.00 0.00 3.18
1914 3893 6.567687 TCCGCTTAATCAAAATCAGTTTCA 57.432 33.333 0.00 0.00 0.00 2.69
1915 3894 5.513141 GCTCCGCTTAATCAAAATCAGTTTC 59.487 40.000 0.00 0.00 0.00 2.78
1916 3895 5.048083 TGCTCCGCTTAATCAAAATCAGTTT 60.048 36.000 0.00 0.00 0.00 2.66
1917 3896 4.458989 TGCTCCGCTTAATCAAAATCAGTT 59.541 37.500 0.00 0.00 0.00 3.16
1918 3897 4.009675 TGCTCCGCTTAATCAAAATCAGT 58.990 39.130 0.00 0.00 0.00 3.41
1919 3898 4.095483 ACTGCTCCGCTTAATCAAAATCAG 59.905 41.667 0.00 0.00 0.00 2.90
1920 3899 4.009675 ACTGCTCCGCTTAATCAAAATCA 58.990 39.130 0.00 0.00 0.00 2.57
1921 3900 4.622701 ACTGCTCCGCTTAATCAAAATC 57.377 40.909 0.00 0.00 0.00 2.17
1922 3901 4.142381 GGAACTGCTCCGCTTAATCAAAAT 60.142 41.667 0.00 0.00 33.37 1.82
1923 3902 3.190535 GGAACTGCTCCGCTTAATCAAAA 59.809 43.478 0.00 0.00 33.37 2.44
1924 3903 2.747446 GGAACTGCTCCGCTTAATCAAA 59.253 45.455 0.00 0.00 33.37 2.69
1925 3904 2.356135 GGAACTGCTCCGCTTAATCAA 58.644 47.619 0.00 0.00 33.37 2.57
1926 3905 2.024176 GGAACTGCTCCGCTTAATCA 57.976 50.000 0.00 0.00 33.37 2.57
1935 3914 0.315251 GGCTTGTTTGGAACTGCTCC 59.685 55.000 0.00 0.00 45.64 4.70
1936 3915 1.032014 TGGCTTGTTTGGAACTGCTC 58.968 50.000 8.39 2.61 34.06 4.26
1937 3916 1.708341 ATGGCTTGTTTGGAACTGCT 58.292 45.000 8.39 0.00 34.06 4.24
1938 3917 2.295909 TGTATGGCTTGTTTGGAACTGC 59.704 45.455 0.00 0.00 0.00 4.40
1939 3918 4.789012 ATGTATGGCTTGTTTGGAACTG 57.211 40.909 0.00 0.00 0.00 3.16
1940 3919 6.266558 TGTTAATGTATGGCTTGTTTGGAACT 59.733 34.615 0.00 0.00 0.00 3.01
1941 3920 6.451393 TGTTAATGTATGGCTTGTTTGGAAC 58.549 36.000 0.00 0.00 0.00 3.62
1942 3921 6.491745 TCTGTTAATGTATGGCTTGTTTGGAA 59.508 34.615 0.00 0.00 0.00 3.53
1943 3922 6.007076 TCTGTTAATGTATGGCTTGTTTGGA 58.993 36.000 0.00 0.00 0.00 3.53
1944 3923 6.266168 TCTGTTAATGTATGGCTTGTTTGG 57.734 37.500 0.00 0.00 0.00 3.28
1945 3924 9.669353 GATATCTGTTAATGTATGGCTTGTTTG 57.331 33.333 0.00 0.00 0.00 2.93
1946 3925 9.632638 AGATATCTGTTAATGTATGGCTTGTTT 57.367 29.630 3.89 0.00 0.00 2.83
1947 3926 9.060347 CAGATATCTGTTAATGTATGGCTTGTT 57.940 33.333 22.42 0.00 39.09 2.83
1948 3927 8.432013 TCAGATATCTGTTAATGTATGGCTTGT 58.568 33.333 27.80 0.00 44.12 3.16
1949 3928 8.837788 TCAGATATCTGTTAATGTATGGCTTG 57.162 34.615 27.80 2.02 44.12 4.01
1950 3929 9.851686 TTTCAGATATCTGTTAATGTATGGCTT 57.148 29.630 27.80 0.00 44.12 4.35
2012 3991 7.847096 TCACCTATGAACTATAAGTTGCTCAA 58.153 34.615 0.00 0.00 38.80 3.02
2036 4015 7.013655 ACCATGCCAGATAAGACATTGTAATTC 59.986 37.037 0.00 0.00 0.00 2.17
2039 4020 5.589855 CACCATGCCAGATAAGACATTGTAA 59.410 40.000 0.00 0.00 0.00 2.41
2086 4067 3.438360 CCACAGTCAACAAGAGCAAAAC 58.562 45.455 0.00 0.00 0.00 2.43
2106 4087 2.510918 GTAAGAGGAACCCGCGCC 60.511 66.667 0.00 0.00 0.00 6.53
2107 4088 1.810030 CAGTAAGAGGAACCCGCGC 60.810 63.158 0.00 0.00 0.00 6.86
2115 4096 0.966179 TGCGCTGAACAGTAAGAGGA 59.034 50.000 9.73 0.00 0.00 3.71
2116 4097 1.795768 TTGCGCTGAACAGTAAGAGG 58.204 50.000 9.73 0.00 0.00 3.69
2120 4110 3.563808 AGACAAATTGCGCTGAACAGTAA 59.436 39.130 9.73 0.00 0.00 2.24
2142 4132 8.334263 TGAACACTATGTTATTTCATTCAGCA 57.666 30.769 0.00 0.00 41.28 4.41
2179 4170 4.019321 TGCTAAGAAGTTAGGCCATCTTGT 60.019 41.667 5.01 1.74 36.83 3.16
2205 4196 3.057174 AGAAGAAGGTGAAGTCTGCTACG 60.057 47.826 0.00 0.00 27.03 3.51
2210 4201 4.061596 GGTTGAGAAGAAGGTGAAGTCTG 58.938 47.826 0.00 0.00 0.00 3.51
2213 4204 2.807108 GCGGTTGAGAAGAAGGTGAAGT 60.807 50.000 0.00 0.00 0.00 3.01
2288 4279 1.601903 CAACAATAGTGTGTGTGCGGT 59.398 47.619 0.00 0.00 38.27 5.68
2289 4280 1.601903 ACAACAATAGTGTGTGTGCGG 59.398 47.619 0.00 0.00 38.27 5.69
2291 4282 4.027572 ACAACAACAATAGTGTGTGTGC 57.972 40.909 0.00 0.00 38.27 4.57
2292 4283 5.398169 ACAACAACAACAATAGTGTGTGTG 58.602 37.500 0.00 0.00 38.27 3.82
2301 4292 7.224753 ACAACAACAACAACAACAACAACAATA 59.775 29.630 0.00 0.00 0.00 1.90
2317 4322 6.402011 CCATTGAAAGGAACAACAACAACAAC 60.402 38.462 0.00 0.00 0.00 3.32
2365 4370 4.396166 CGGCTGTCACATTTTTCTTATCCT 59.604 41.667 0.00 0.00 0.00 3.24
2368 4374 4.142600 GCTCGGCTGTCACATTTTTCTTAT 60.143 41.667 0.00 0.00 0.00 1.73
2372 4378 1.537202 AGCTCGGCTGTCACATTTTTC 59.463 47.619 0.00 0.00 37.57 2.29
2386 4392 5.390567 GGACTAACAAATGTAACAAGCTCGG 60.391 44.000 0.00 0.00 0.00 4.63
2387 4393 5.618561 GGACTAACAAATGTAACAAGCTCG 58.381 41.667 0.00 0.00 0.00 5.03
2388 4394 5.390567 CCGGACTAACAAATGTAACAAGCTC 60.391 44.000 0.00 0.00 0.00 4.09
2437 5054 4.418013 TCAAAGCAACGTGATATGTTGG 57.582 40.909 13.83 0.55 43.44 3.77
2464 5081 5.010012 ACCAAATAAGGACAAGCTGAAGTTG 59.990 40.000 0.00 0.00 0.00 3.16
2472 5089 7.375053 TGTTGAATAACCAAATAAGGACAAGC 58.625 34.615 0.00 0.00 35.92 4.01
2484 5106 8.328758 AGGTTCAGAGATATGTTGAATAACCAA 58.671 33.333 0.00 0.00 35.92 3.67
2534 5156 0.582005 GCTAGGCTTTTACGCATCGG 59.418 55.000 0.00 0.00 0.00 4.18
2547 5169 5.581085 CGTAGGGTAATATGATTTGCTAGGC 59.419 44.000 0.00 0.00 0.00 3.93
2659 6496 0.327924 TGCCGACATTGAGGTTGGAT 59.672 50.000 6.26 0.00 43.89 3.41
2787 6660 8.136165 GTGAACTGAACTTCAAGAACTCTACTA 58.864 37.037 0.00 0.00 31.90 1.82
2826 6707 1.606224 GCTGGTTTGGTTCTTGCCATG 60.606 52.381 0.00 0.00 38.48 3.66
2871 6752 6.588373 TCAACTTCTTTTGTTTTACACTTGCC 59.412 34.615 0.00 0.00 0.00 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.