Multiple sequence alignment - TraesCS2D01G513900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G513900 chr2D 100.000 5289 0 0 1 5289 605934315 605939603 0.000000e+00 9768.0
1 TraesCS2D01G513900 chr2D 89.827 462 15 3 1 431 605921150 605921610 9.940000e-157 564.0
2 TraesCS2D01G513900 chr2A 90.834 3142 167 47 186 3270 737426897 737429974 0.000000e+00 4095.0
3 TraesCS2D01G513900 chr2A 90.518 1487 84 20 3451 4907 737429988 737431447 0.000000e+00 1912.0
4 TraesCS2D01G513900 chr2A 96.417 307 8 2 4731 5037 737451297 737451600 2.200000e-138 503.0
5 TraesCS2D01G513900 chr2A 93.220 236 10 4 5057 5289 737431862 737432094 5.070000e-90 342.0
6 TraesCS2D01G513900 chr2A 90.991 222 16 2 5069 5289 737466895 737467113 4.000000e-76 296.0
7 TraesCS2D01G513900 chr2A 82.109 313 29 10 2707 3010 758272343 758272049 5.290000e-60 243.0
8 TraesCS2D01G513900 chr2A 91.667 120 4 4 4633 4747 737450470 737450588 1.520000e-35 161.0
9 TraesCS2D01G513900 chr2B 91.262 2781 121 46 563 3266 736786696 736789431 0.000000e+00 3677.0
10 TraesCS2D01G513900 chr2B 92.558 1814 80 25 3242 5027 736789790 736791576 0.000000e+00 2551.0
11 TraesCS2D01G513900 chr2B 93.627 408 17 5 4633 5034 736853458 736853862 7.580000e-168 601.0
12 TraesCS2D01G513900 chr2B 93.250 400 19 4 4633 5027 736846018 736846414 2.750000e-162 582.0
13 TraesCS2D01G513900 chr2B 91.928 223 13 3 5069 5289 736854091 736854310 1.850000e-79 307.0
14 TraesCS2D01G513900 chr2B 88.546 227 18 3 5068 5289 736847119 736847342 8.730000e-68 268.0
15 TraesCS2D01G513900 chr2B 86.056 251 17 5 186 431 736786287 736786524 2.440000e-63 254.0
16 TraesCS2D01G513900 chr2B 81.847 314 29 12 2707 3010 770055287 770054992 6.850000e-59 239.0
17 TraesCS2D01G513900 chr2B 80.364 275 26 15 2582 2842 736893971 736894231 3.250000e-42 183.0
18 TraesCS2D01G513900 chr2B 89.928 139 9 3 5055 5192 736858871 736859005 1.960000e-39 174.0
19 TraesCS2D01G513900 chr2B 98.039 51 1 0 429 479 736786566 736786616 7.300000e-14 89.8
20 TraesCS2D01G513900 chr6B 86.364 110 15 0 2433 2542 719860082 719860191 2.590000e-23 121.0
21 TraesCS2D01G513900 chr6D 84.615 117 18 0 2429 2545 470965764 470965648 3.350000e-22 117.0
22 TraesCS2D01G513900 chr6A 84.615 117 18 0 2426 2542 615773296 615773412 3.350000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G513900 chr2D 605934315 605939603 5288 False 9768.000000 9768 100.00000 1 5289 1 chr2D.!!$F2 5288
1 TraesCS2D01G513900 chr2A 737426897 737432094 5197 False 2116.333333 4095 91.52400 186 5289 3 chr2A.!!$F2 5103
2 TraesCS2D01G513900 chr2A 737450470 737451600 1130 False 332.000000 503 94.04200 4633 5037 2 chr2A.!!$F3 404
3 TraesCS2D01G513900 chr2B 736786287 736791576 5289 False 1642.950000 3677 91.97875 186 5027 4 chr2B.!!$F3 4841
4 TraesCS2D01G513900 chr2B 736853458 736854310 852 False 454.000000 601 92.77750 4633 5289 2 chr2B.!!$F5 656
5 TraesCS2D01G513900 chr2B 736846018 736847342 1324 False 425.000000 582 90.89800 4633 5289 2 chr2B.!!$F4 656

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
64 65 0.036164 TTGCATTGACTACCGCCAGT 59.964 50.000 0.00 0.00 0.00 4.00 F
102 103 0.107268 AACAGTAGAAAACGGCCGGT 59.893 50.000 31.76 23.68 0.00 5.28 F
549 617 0.108615 GGATGTACTCGCACTGCACT 60.109 55.000 1.11 0.00 0.00 4.40 F
732 847 0.458669 GCGTGTAGCTTAGCCACCTA 59.541 55.000 0.00 0.00 44.04 3.08 F
872 1003 0.896019 CTCACTCGGGAGTCACACCT 60.896 60.000 0.00 0.00 40.20 4.00 F
1555 1722 1.000019 ATCGACCTCTCCGGGAACA 60.000 57.895 0.00 0.00 36.97 3.18 F
3360 3950 0.033781 CCACAATGCTGGTTGTTGGG 59.966 55.000 0.91 0.00 40.17 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1956 2123 1.002366 AAGCAATCGCGACAGTCATC 58.998 50.0 12.93 0.00 45.49 2.92 R
2241 2408 0.459934 GCTGCTCCAGACTGTAGCTG 60.460 60.0 19.41 19.03 38.54 4.24 R
2463 2630 0.322906 CCTCCTTGGCCTGGAAGAAC 60.323 60.0 16.74 0.00 34.07 3.01 R
2808 2984 0.394352 CAACCCATACAGCAGACCCC 60.394 60.0 0.00 0.00 0.00 4.95 R
2809 2985 0.618458 TCAACCCATACAGCAGACCC 59.382 55.0 0.00 0.00 0.00 4.46 R
3672 4267 0.318445 GTGAAGCACCAGCAGCAAAG 60.318 55.0 0.00 0.00 45.49 2.77 R
4572 5194 0.036306 ACTGTGGCCTTTAACCTCGG 59.964 55.0 3.32 0.00 34.03 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.953466 TAACTGCTTAGCACCTACCG 57.047 50.000 1.39 0.00 33.79 4.02
24 25 0.391263 AACTGCTTAGCACCTACCGC 60.391 55.000 1.39 0.00 33.79 5.68
25 26 1.521681 CTGCTTAGCACCTACCGCC 60.522 63.158 1.39 0.00 33.79 6.13
26 27 2.585247 GCTTAGCACCTACCGCCG 60.585 66.667 0.00 0.00 0.00 6.46
27 28 2.106332 CTTAGCACCTACCGCCGG 59.894 66.667 0.00 0.00 0.00 6.13
28 29 2.362760 TTAGCACCTACCGCCGGA 60.363 61.111 11.71 0.00 0.00 5.14
29 30 2.351336 CTTAGCACCTACCGCCGGAG 62.351 65.000 11.71 0.00 0.00 4.63
30 31 3.650298 TAGCACCTACCGCCGGAGT 62.650 63.158 11.71 3.70 0.00 3.85
31 32 4.509737 GCACCTACCGCCGGAGTC 62.510 72.222 11.71 0.00 0.00 3.36
32 33 2.754658 CACCTACCGCCGGAGTCT 60.755 66.667 11.71 0.00 0.00 3.24
33 34 2.754658 ACCTACCGCCGGAGTCTG 60.755 66.667 11.71 0.00 0.00 3.51
34 35 2.754658 CCTACCGCCGGAGTCTGT 60.755 66.667 11.71 0.00 0.00 3.41
35 36 2.490217 CTACCGCCGGAGTCTGTG 59.510 66.667 11.71 0.00 0.00 3.66
36 37 2.034532 TACCGCCGGAGTCTGTGA 59.965 61.111 11.71 0.00 0.00 3.58
37 38 2.267681 CTACCGCCGGAGTCTGTGAC 62.268 65.000 11.71 0.00 0.00 3.67
38 39 4.778415 CCGCCGGAGTCTGTGACG 62.778 72.222 5.05 0.00 37.67 4.35
41 42 3.991999 CCGGAGTCTGTGACGGTA 58.008 61.111 0.00 0.00 41.34 4.02
42 43 2.260247 CCGGAGTCTGTGACGGTAA 58.740 57.895 0.00 0.00 41.34 2.85
43 44 0.815734 CCGGAGTCTGTGACGGTAAT 59.184 55.000 0.00 0.00 41.34 1.89
44 45 1.469251 CCGGAGTCTGTGACGGTAATG 60.469 57.143 0.00 0.00 41.34 1.90
45 46 1.201647 CGGAGTCTGTGACGGTAATGT 59.798 52.381 0.00 0.00 37.67 2.71
46 47 2.352421 CGGAGTCTGTGACGGTAATGTT 60.352 50.000 0.00 0.00 37.67 2.71
47 48 2.993899 GGAGTCTGTGACGGTAATGTTG 59.006 50.000 0.00 0.00 37.67 3.33
48 49 2.412089 GAGTCTGTGACGGTAATGTTGC 59.588 50.000 0.00 0.00 37.67 4.17
49 50 2.139917 GTCTGTGACGGTAATGTTGCA 58.860 47.619 0.00 0.00 0.00 4.08
50 51 2.742053 GTCTGTGACGGTAATGTTGCAT 59.258 45.455 0.00 0.00 0.00 3.96
51 52 3.188460 GTCTGTGACGGTAATGTTGCATT 59.812 43.478 0.00 0.00 0.00 3.56
52 53 3.188254 TCTGTGACGGTAATGTTGCATTG 59.812 43.478 4.78 0.00 0.00 2.82
53 54 3.142174 TGTGACGGTAATGTTGCATTGA 58.858 40.909 4.78 0.00 0.00 2.57
54 55 3.058570 TGTGACGGTAATGTTGCATTGAC 60.059 43.478 4.78 0.00 0.00 3.18
55 56 3.188460 GTGACGGTAATGTTGCATTGACT 59.812 43.478 4.78 0.00 0.00 3.41
56 57 4.390603 GTGACGGTAATGTTGCATTGACTA 59.609 41.667 4.78 0.00 0.00 2.59
57 58 4.390603 TGACGGTAATGTTGCATTGACTAC 59.609 41.667 4.78 0.00 0.00 2.73
58 59 3.687698 ACGGTAATGTTGCATTGACTACC 59.312 43.478 4.78 3.73 0.00 3.18
59 60 3.242284 CGGTAATGTTGCATTGACTACCG 60.242 47.826 15.06 15.06 42.83 4.02
60 61 2.919666 AATGTTGCATTGACTACCGC 57.080 45.000 0.00 0.00 0.00 5.68
61 62 1.094785 ATGTTGCATTGACTACCGCC 58.905 50.000 0.00 0.00 0.00 6.13
62 63 0.250510 TGTTGCATTGACTACCGCCA 60.251 50.000 0.00 0.00 0.00 5.69
63 64 0.447801 GTTGCATTGACTACCGCCAG 59.552 55.000 0.00 0.00 0.00 4.85
64 65 0.036164 TTGCATTGACTACCGCCAGT 59.964 50.000 0.00 0.00 0.00 4.00
65 66 0.673333 TGCATTGACTACCGCCAGTG 60.673 55.000 0.00 0.00 0.00 3.66
66 67 0.673644 GCATTGACTACCGCCAGTGT 60.674 55.000 0.00 0.00 0.00 3.55
67 68 1.359848 CATTGACTACCGCCAGTGTC 58.640 55.000 0.00 0.00 0.00 3.67
68 69 1.066858 CATTGACTACCGCCAGTGTCT 60.067 52.381 0.00 0.00 31.62 3.41
69 70 0.317160 TTGACTACCGCCAGTGTCTG 59.683 55.000 0.00 0.00 31.62 3.51
70 71 1.446272 GACTACCGCCAGTGTCTGC 60.446 63.158 0.00 0.00 0.00 4.26
71 72 2.507102 CTACCGCCAGTGTCTGCG 60.507 66.667 5.40 5.40 33.41 5.18
72 73 2.986979 TACCGCCAGTGTCTGCGA 60.987 61.111 12.95 0.00 34.71 5.10
73 74 3.277211 TACCGCCAGTGTCTGCGAC 62.277 63.158 12.95 2.32 34.71 5.19
75 76 4.700365 CGCCAGTGTCTGCGACGA 62.700 66.667 6.42 0.00 34.71 4.20
76 77 2.125912 GCCAGTGTCTGCGACGAT 60.126 61.111 0.00 0.00 34.95 3.73
77 78 1.138883 GCCAGTGTCTGCGACGATA 59.861 57.895 0.00 0.00 34.95 2.92
78 79 0.867753 GCCAGTGTCTGCGACGATAG 60.868 60.000 0.00 0.00 46.19 2.08
79 80 0.248661 CCAGTGTCTGCGACGATAGG 60.249 60.000 0.00 1.42 43.77 2.57
80 81 0.248661 CAGTGTCTGCGACGATAGGG 60.249 60.000 0.00 0.00 43.77 3.53
81 82 0.680280 AGTGTCTGCGACGATAGGGT 60.680 55.000 0.00 0.00 43.77 4.34
82 83 0.525668 GTGTCTGCGACGATAGGGTG 60.526 60.000 0.00 0.00 43.77 4.61
83 84 0.678684 TGTCTGCGACGATAGGGTGA 60.679 55.000 0.00 0.00 43.77 4.02
84 85 0.454600 GTCTGCGACGATAGGGTGAA 59.545 55.000 0.00 0.00 43.77 3.18
85 86 0.454600 TCTGCGACGATAGGGTGAAC 59.545 55.000 0.00 0.00 43.77 3.18
86 87 0.172578 CTGCGACGATAGGGTGAACA 59.827 55.000 0.00 0.00 43.77 3.18
87 88 0.172578 TGCGACGATAGGGTGAACAG 59.827 55.000 0.00 0.00 43.77 3.16
88 89 0.172803 GCGACGATAGGGTGAACAGT 59.827 55.000 0.00 0.00 43.77 3.55
89 90 1.402968 GCGACGATAGGGTGAACAGTA 59.597 52.381 0.00 0.00 43.77 2.74
90 91 2.541178 GCGACGATAGGGTGAACAGTAG 60.541 54.545 0.00 0.00 43.77 2.57
91 92 2.941064 CGACGATAGGGTGAACAGTAGA 59.059 50.000 0.00 0.00 43.77 2.59
92 93 3.376234 CGACGATAGGGTGAACAGTAGAA 59.624 47.826 0.00 0.00 43.77 2.10
93 94 4.142534 CGACGATAGGGTGAACAGTAGAAA 60.143 45.833 0.00 0.00 43.77 2.52
94 95 5.620654 CGACGATAGGGTGAACAGTAGAAAA 60.621 44.000 0.00 0.00 43.77 2.29
95 96 5.476614 ACGATAGGGTGAACAGTAGAAAAC 58.523 41.667 0.00 0.00 43.77 2.43
96 97 4.561606 CGATAGGGTGAACAGTAGAAAACG 59.438 45.833 0.00 0.00 0.00 3.60
97 98 3.121738 AGGGTGAACAGTAGAAAACGG 57.878 47.619 0.00 0.00 0.00 4.44
98 99 1.534163 GGGTGAACAGTAGAAAACGGC 59.466 52.381 0.00 0.00 0.00 5.68
99 100 1.534163 GGTGAACAGTAGAAAACGGCC 59.466 52.381 0.00 0.00 0.00 6.13
100 101 1.193874 GTGAACAGTAGAAAACGGCCG 59.806 52.381 26.86 26.86 0.00 6.13
101 102 0.794473 GAACAGTAGAAAACGGCCGG 59.206 55.000 31.76 11.88 0.00 6.13
102 103 0.107268 AACAGTAGAAAACGGCCGGT 59.893 50.000 31.76 23.68 0.00 5.28
103 104 0.601841 ACAGTAGAAAACGGCCGGTG 60.602 55.000 31.76 11.98 0.00 4.94
104 105 0.601841 CAGTAGAAAACGGCCGGTGT 60.602 55.000 31.76 21.16 0.00 4.16
105 106 0.107268 AGTAGAAAACGGCCGGTGTT 59.893 50.000 31.76 19.70 0.00 3.32
106 107 0.946528 GTAGAAAACGGCCGGTGTTT 59.053 50.000 31.76 24.73 41.07 2.83
107 108 2.142319 GTAGAAAACGGCCGGTGTTTA 58.858 47.619 31.76 15.93 38.52 2.01
108 109 1.232119 AGAAAACGGCCGGTGTTTAG 58.768 50.000 31.76 0.00 38.52 1.85
109 110 0.946528 GAAAACGGCCGGTGTTTAGT 59.053 50.000 31.76 2.65 38.52 2.24
110 111 1.334556 GAAAACGGCCGGTGTTTAGTT 59.665 47.619 31.76 13.50 38.52 2.24
111 112 0.664224 AAACGGCCGGTGTTTAGTTG 59.336 50.000 31.76 0.00 37.75 3.16
112 113 0.179051 AACGGCCGGTGTTTAGTTGA 60.179 50.000 31.76 0.00 0.00 3.18
113 114 0.601841 ACGGCCGGTGTTTAGTTGAG 60.602 55.000 31.76 0.00 0.00 3.02
114 115 0.601841 CGGCCGGTGTTTAGTTGAGT 60.602 55.000 20.10 0.00 0.00 3.41
115 116 1.601166 GGCCGGTGTTTAGTTGAGTT 58.399 50.000 1.90 0.00 0.00 3.01
116 117 1.265905 GGCCGGTGTTTAGTTGAGTTG 59.734 52.381 1.90 0.00 0.00 3.16
117 118 2.215196 GCCGGTGTTTAGTTGAGTTGA 58.785 47.619 1.90 0.00 0.00 3.18
118 119 2.032290 GCCGGTGTTTAGTTGAGTTGAC 60.032 50.000 1.90 0.00 0.00 3.18
119 120 2.220133 CCGGTGTTTAGTTGAGTTGACG 59.780 50.000 0.00 0.00 0.00 4.35
120 121 2.861935 CGGTGTTTAGTTGAGTTGACGT 59.138 45.455 0.00 0.00 0.00 4.34
121 122 3.302221 CGGTGTTTAGTTGAGTTGACGTG 60.302 47.826 0.00 0.00 0.00 4.49
122 123 3.545426 GGTGTTTAGTTGAGTTGACGTGC 60.545 47.826 0.00 0.00 0.00 5.34
123 124 3.062909 GTGTTTAGTTGAGTTGACGTGCA 59.937 43.478 0.00 0.00 0.00 4.57
124 125 3.874543 TGTTTAGTTGAGTTGACGTGCAT 59.125 39.130 0.00 0.00 0.00 3.96
125 126 4.211389 GTTTAGTTGAGTTGACGTGCATG 58.789 43.478 3.82 3.82 0.00 4.06
126 127 2.238942 AGTTGAGTTGACGTGCATGA 57.761 45.000 14.17 0.00 0.00 3.07
127 128 2.138320 AGTTGAGTTGACGTGCATGAG 58.862 47.619 14.17 0.00 0.00 2.90
128 129 1.867233 GTTGAGTTGACGTGCATGAGT 59.133 47.619 14.17 2.07 0.00 3.41
129 130 1.501169 TGAGTTGACGTGCATGAGTG 58.499 50.000 14.17 0.00 0.00 3.51
147 148 4.104143 CGCTACCGCCGAGAATTT 57.896 55.556 0.00 0.00 0.00 1.82
148 149 1.925052 CGCTACCGCCGAGAATTTC 59.075 57.895 0.00 0.00 0.00 2.17
237 238 4.927782 GTGCTGGCACCGTGGACA 62.928 66.667 14.03 0.00 40.79 4.02
243 244 1.822186 GGCACCGTGGACAAACTGT 60.822 57.895 0.00 0.00 0.00 3.55
246 247 1.078072 ACCGTGGACAAACTGTGCA 60.078 52.632 0.00 0.00 46.44 4.57
261 262 1.074775 TGCAGCCCAGAACGGAAAT 59.925 52.632 0.00 0.00 36.56 2.17
408 417 2.688666 TGGGAGAAGCAGGCCGAT 60.689 61.111 0.00 0.00 0.00 4.18
422 431 2.753701 CGATTGACCCCACCCACA 59.246 61.111 0.00 0.00 0.00 4.17
423 432 1.674322 CGATTGACCCCACCCACAC 60.674 63.158 0.00 0.00 0.00 3.82
489 540 4.275524 GCACTCAGCCACTCACTC 57.724 61.111 0.00 0.00 37.23 3.51
490 541 1.735920 GCACTCAGCCACTCACTCG 60.736 63.158 0.00 0.00 37.23 4.18
491 542 1.080230 CACTCAGCCACTCACTCGG 60.080 63.158 0.00 0.00 0.00 4.63
492 543 1.531840 ACTCAGCCACTCACTCGGT 60.532 57.895 0.00 0.00 0.00 4.69
493 544 1.080230 CTCAGCCACTCACTCGGTG 60.080 63.158 0.00 0.00 34.45 4.94
494 545 2.740055 CAGCCACTCACTCGGTGC 60.740 66.667 0.00 0.00 32.98 5.01
495 546 4.363990 AGCCACTCACTCGGTGCG 62.364 66.667 0.00 0.00 32.98 5.34
497 548 4.662961 CCACTCACTCGGTGCGCA 62.663 66.667 5.66 5.66 32.98 6.09
498 549 3.406361 CACTCACTCGGTGCGCAC 61.406 66.667 32.15 32.15 32.98 5.34
519 570 2.356135 CACCACTATTCGTTTCCCTGG 58.644 52.381 0.00 0.00 0.00 4.45
520 571 2.027561 CACCACTATTCGTTTCCCTGGA 60.028 50.000 0.00 0.00 0.00 3.86
526 577 1.832719 TTCGTTTCCCTGGATCGGCA 61.833 55.000 0.00 0.00 0.00 5.69
539 607 2.474816 GATCGGCAGTTGGATGTACTC 58.525 52.381 0.00 0.00 0.00 2.59
540 608 0.172578 TCGGCAGTTGGATGTACTCG 59.827 55.000 0.00 0.00 0.00 4.18
543 611 0.721718 GCAGTTGGATGTACTCGCAC 59.278 55.000 0.00 0.00 0.00 5.34
544 612 1.673033 GCAGTTGGATGTACTCGCACT 60.673 52.381 0.00 0.00 0.00 4.40
547 615 0.320050 TTGGATGTACTCGCACTGCA 59.680 50.000 1.11 0.00 0.00 4.41
549 617 0.108615 GGATGTACTCGCACTGCACT 60.109 55.000 1.11 0.00 0.00 4.40
550 618 1.673033 GGATGTACTCGCACTGCACTT 60.673 52.381 1.11 0.00 0.00 3.16
551 619 2.416836 GGATGTACTCGCACTGCACTTA 60.417 50.000 1.11 0.00 0.00 2.24
552 620 2.804697 TGTACTCGCACTGCACTTAA 57.195 45.000 1.11 0.00 0.00 1.85
553 621 2.400399 TGTACTCGCACTGCACTTAAC 58.600 47.619 1.11 0.00 0.00 2.01
555 623 0.602905 ACTCGCACTGCACTTAACCC 60.603 55.000 1.11 0.00 0.00 4.11
556 624 0.602638 CTCGCACTGCACTTAACCCA 60.603 55.000 1.11 0.00 0.00 4.51
558 626 0.884704 CGCACTGCACTTAACCCACT 60.885 55.000 1.11 0.00 0.00 4.00
559 627 1.606994 CGCACTGCACTTAACCCACTA 60.607 52.381 1.11 0.00 0.00 2.74
560 628 2.711542 GCACTGCACTTAACCCACTAT 58.288 47.619 0.00 0.00 0.00 2.12
561 629 3.677700 CGCACTGCACTTAACCCACTATA 60.678 47.826 1.11 0.00 0.00 1.31
562 630 3.871594 GCACTGCACTTAACCCACTATAG 59.128 47.826 0.00 0.00 0.00 1.31
622 712 1.134310 CCGATGTACCCTTAACCCACC 60.134 57.143 0.00 0.00 0.00 4.61
651 741 5.457140 TCACGTGAAAATAAACCAATCTGC 58.543 37.500 17.62 0.00 0.00 4.26
660 750 9.087424 GAAAATAAACCAATCTGCTCAATTACC 57.913 33.333 0.00 0.00 0.00 2.85
661 751 7.961326 AATAAACCAATCTGCTCAATTACCT 57.039 32.000 0.00 0.00 0.00 3.08
662 752 5.904362 AAACCAATCTGCTCAATTACCTC 57.096 39.130 0.00 0.00 0.00 3.85
663 753 4.851639 ACCAATCTGCTCAATTACCTCT 57.148 40.909 0.00 0.00 0.00 3.69
665 755 4.133078 CCAATCTGCTCAATTACCTCTCC 58.867 47.826 0.00 0.00 0.00 3.71
691 803 1.593006 CGATGATTCCAGCACGTTACC 59.407 52.381 0.00 0.00 0.00 2.85
701 816 2.735134 CAGCACGTTACCAGTACTTTCC 59.265 50.000 0.00 0.00 0.00 3.13
732 847 0.458669 GCGTGTAGCTTAGCCACCTA 59.541 55.000 0.00 0.00 44.04 3.08
760 886 4.202111 ACTGCGTTTAAACTCCAAAGCAAT 60.202 37.500 16.01 4.52 32.77 3.56
872 1003 0.896019 CTCACTCGGGAGTCACACCT 60.896 60.000 0.00 0.00 40.20 4.00
980 1123 2.361230 CCTCCCCAGCCCGAAAAC 60.361 66.667 0.00 0.00 0.00 2.43
994 1137 1.112950 GAAAACCCCCAAACGAACCA 58.887 50.000 0.00 0.00 0.00 3.67
1555 1722 1.000019 ATCGACCTCTCCGGGAACA 60.000 57.895 0.00 0.00 36.97 3.18
1614 1781 4.899239 CCGCATCTCACGGCCCTC 62.899 72.222 0.00 0.00 44.90 4.30
1956 2123 1.784525 AAGTGAAGAAGAAGACGGCG 58.215 50.000 4.80 4.80 0.00 6.46
2559 2726 1.153168 TAAGCTCCATTGCTCGGCC 60.153 57.895 0.00 0.00 43.24 6.13
2619 2787 3.251004 CACTTAGTGCAAGGAACACTTCC 59.749 47.826 0.00 0.00 46.01 3.46
2658 2826 4.040952 ACTTGAATCTGCAACTCTAGTGGT 59.959 41.667 5.91 0.00 0.00 4.16
2725 2901 2.198827 ATCCTCACATGGCAACGAAA 57.801 45.000 0.00 0.00 42.51 3.46
2805 2981 2.806244 GGAACGATGTGTGCAGTACTTT 59.194 45.455 0.00 0.00 0.00 2.66
2806 2982 3.120649 GGAACGATGTGTGCAGTACTTTC 60.121 47.826 0.00 0.00 0.00 2.62
2807 2983 3.386768 ACGATGTGTGCAGTACTTTCT 57.613 42.857 0.00 0.00 0.00 2.52
2808 2984 3.059884 ACGATGTGTGCAGTACTTTCTG 58.940 45.455 0.00 0.00 38.35 3.02
2809 2985 2.413112 CGATGTGTGCAGTACTTTCTGG 59.587 50.000 0.00 0.00 36.12 3.86
2810 2986 2.254546 TGTGTGCAGTACTTTCTGGG 57.745 50.000 0.00 0.00 36.12 4.45
2811 2987 1.202758 TGTGTGCAGTACTTTCTGGGG 60.203 52.381 0.00 0.00 36.12 4.96
2939 3115 3.883489 GTGGGATTGAACATTAGTAGGGC 59.117 47.826 0.00 0.00 0.00 5.19
2958 3134 2.363683 GCCTCATCCTTTGTCTGGAAG 58.636 52.381 0.00 0.00 37.13 3.46
2991 3167 4.034510 GCAGTAAGCCAGTAACATGTGATC 59.965 45.833 0.00 0.00 37.23 2.92
3015 3191 6.204688 TCGCTGTTCTAGATCAAACAACAATT 59.795 34.615 5.07 0.00 35.13 2.32
3033 3209 9.696917 ACAACAATTTAGATTCATGAAAAGGAC 57.303 29.630 13.09 2.49 0.00 3.85
3041 3217 2.358957 TCATGAAAAGGACGCCATGAG 58.641 47.619 0.00 0.00 40.04 2.90
3042 3218 1.402968 CATGAAAAGGACGCCATGAGG 59.597 52.381 0.00 0.00 38.83 3.86
3043 3219 0.400213 TGAAAAGGACGCCATGAGGT 59.600 50.000 0.00 0.00 37.19 3.85
3045 3221 0.673644 AAAAGGACGCCATGAGGTCG 60.674 55.000 0.00 0.00 39.35 4.79
3046 3222 3.665675 AAGGACGCCATGAGGTCGC 62.666 63.158 0.00 0.00 37.76 5.19
3047 3223 4.451150 GGACGCCATGAGGTCGCA 62.451 66.667 0.00 0.00 37.76 5.10
3048 3224 2.434185 GACGCCATGAGGTCGCAA 60.434 61.111 0.00 0.00 37.76 4.85
3049 3225 2.740714 GACGCCATGAGGTCGCAAC 61.741 63.158 0.00 0.00 37.76 4.17
3051 3227 2.034879 CGCCATGAGGTCGCAACTT 61.035 57.895 0.00 0.00 37.19 2.66
3052 3228 1.577328 CGCCATGAGGTCGCAACTTT 61.577 55.000 0.00 0.00 37.19 2.66
3106 3300 5.570234 TTGGTAATTATTGCCGACCTTTC 57.430 39.130 7.52 0.00 38.38 2.62
3245 3442 7.820648 AGAGGACAATGTTACAATTGCTTTAG 58.179 34.615 5.05 0.00 40.54 1.85
3318 3908 4.755411 TGATTTGGATCCGACAGAAGTAC 58.245 43.478 7.39 0.00 0.00 2.73
3340 3930 8.041323 AGTACGTAAATTTGATGAGTTGATCCT 58.959 33.333 0.00 0.00 0.00 3.24
3360 3950 0.033781 CCACAATGCTGGTTGTTGGG 59.966 55.000 0.91 0.00 40.17 4.12
3404 3994 0.520404 CTTCATGTGTGTGAGCTGGC 59.480 55.000 0.00 0.00 0.00 4.85
3476 4066 4.461781 AGAAATTGATGTGAGCCTTTCAGG 59.538 41.667 0.00 0.00 36.21 3.86
3479 4069 4.842531 TTGATGTGAGCCTTTCAGGATA 57.157 40.909 0.00 0.00 37.67 2.59
3499 4089 6.015010 AGGATACAGTGATAGCGAGCTTATTT 60.015 38.462 1.86 0.00 41.41 1.40
3528 4118 6.312672 TGATATGTTGGTTATGTTCGACTGTG 59.687 38.462 0.00 0.00 0.00 3.66
3558 4148 5.189736 TGTCTATCTGTACTCCAGCCAAATT 59.810 40.000 0.00 0.00 41.25 1.82
3567 4162 7.497595 TGTACTCCAGCCAAATTACATAGTAG 58.502 38.462 0.00 0.00 0.00 2.57
3568 4163 6.561519 ACTCCAGCCAAATTACATAGTAGT 57.438 37.500 0.00 0.00 0.00 2.73
3569 4164 7.670605 ACTCCAGCCAAATTACATAGTAGTA 57.329 36.000 0.00 0.00 0.00 1.82
3571 4166 8.368668 ACTCCAGCCAAATTACATAGTAGTATC 58.631 37.037 0.00 0.00 0.00 2.24
3572 4167 8.257602 TCCAGCCAAATTACATAGTAGTATCA 57.742 34.615 0.00 0.00 0.00 2.15
3573 4168 8.880244 TCCAGCCAAATTACATAGTAGTATCAT 58.120 33.333 0.00 0.00 0.00 2.45
3574 4169 9.155975 CCAGCCAAATTACATAGTAGTATCATC 57.844 37.037 0.00 0.00 0.00 2.92
3575 4170 9.935241 CAGCCAAATTACATAGTAGTATCATCT 57.065 33.333 0.00 0.00 0.00 2.90
3610 4205 3.443681 ACAGAACTTTCCACAAGTTGGTG 59.556 43.478 7.96 3.39 46.97 4.17
3672 4267 6.127952 CGGATACTCTAATAGCACTAGAACCC 60.128 46.154 0.00 0.00 0.00 4.11
3943 4538 0.784778 CAGAAGTCAAAGACGACGCC 59.215 55.000 0.00 0.00 40.98 5.68
3985 4580 3.327757 ACATGAAGTCCAACAGAAGGCTA 59.672 43.478 0.00 0.00 0.00 3.93
3988 4583 2.861147 AGTCCAACAGAAGGCTAACC 57.139 50.000 0.00 0.00 0.00 2.85
4090 4685 1.457346 CAGCAACCAATCTCCAGACC 58.543 55.000 0.00 0.00 0.00 3.85
4279 4880 2.220313 GAGGACGGCGATCTTACTAGT 58.780 52.381 16.62 0.00 0.00 2.57
4295 4896 6.327104 TCTTACTAGTGACTCCTAGACCCTAG 59.673 46.154 5.39 0.00 38.24 3.02
4307 4914 2.363361 CCCTAGTCGTCCCCTGGT 59.637 66.667 0.00 0.00 0.00 4.00
4308 4915 1.217057 ACCCTAGTCGTCCCCTGGTA 61.217 60.000 0.00 0.00 0.00 3.25
4319 4926 2.047061 TCCCCTGGTAGAAATGGATCG 58.953 52.381 0.00 0.00 0.00 3.69
4320 4927 2.047061 CCCCTGGTAGAAATGGATCGA 58.953 52.381 0.00 0.00 0.00 3.59
4321 4928 2.639839 CCCCTGGTAGAAATGGATCGAT 59.360 50.000 0.00 0.00 0.00 3.59
4322 4929 3.557898 CCCCTGGTAGAAATGGATCGATG 60.558 52.174 0.54 0.00 0.00 3.84
4323 4930 3.071602 CCCTGGTAGAAATGGATCGATGT 59.928 47.826 0.54 0.00 0.00 3.06
4326 4933 5.351948 TGGTAGAAATGGATCGATGTCAA 57.648 39.130 0.54 0.00 0.00 3.18
4327 4934 5.116180 TGGTAGAAATGGATCGATGTCAAC 58.884 41.667 0.54 0.83 0.00 3.18
4328 4935 5.104941 TGGTAGAAATGGATCGATGTCAACT 60.105 40.000 0.54 5.68 0.00 3.16
4331 4938 2.627515 ATGGATCGATGTCAACTGGG 57.372 50.000 0.54 0.00 0.00 4.45
4334 4941 1.656652 GATCGATGTCAACTGGGTGG 58.343 55.000 0.54 0.00 0.00 4.61
4356 4963 3.382546 GTGCATTATCCCAAGTGAGCAAT 59.617 43.478 0.00 0.00 32.03 3.56
4357 4964 3.382227 TGCATTATCCCAAGTGAGCAATG 59.618 43.478 0.00 0.00 0.00 2.82
4450 5057 3.037549 GGGGTCATGATCTCTCTGACTT 58.962 50.000 5.82 0.00 39.36 3.01
4477 5084 4.462834 TCTCTTGAGCTCCGAATTCTGTAA 59.537 41.667 12.15 0.00 0.00 2.41
4483 5090 7.284919 TGAGCTCCGAATTCTGTAACATATA 57.715 36.000 12.15 0.00 0.00 0.86
4485 5092 7.814587 TGAGCTCCGAATTCTGTAACATATATG 59.185 37.037 12.15 11.29 0.00 1.78
4486 5093 7.671302 AGCTCCGAATTCTGTAACATATATGT 58.329 34.615 12.75 12.75 44.20 2.29
4525 5141 4.260985 GTGTATGGATGTTGTGGTGATGA 58.739 43.478 0.00 0.00 0.00 2.92
4532 5148 4.384098 GGATGTTGTGGTGATGAGGACATA 60.384 45.833 0.00 0.00 36.82 2.29
4533 5149 4.842531 TGTTGTGGTGATGAGGACATAT 57.157 40.909 0.00 0.00 36.82 1.78
4588 5210 2.704464 ATACCGAGGTTAAAGGCCAC 57.296 50.000 5.01 0.00 0.00 5.01
4594 5216 2.808933 CGAGGTTAAAGGCCACAGTCAA 60.809 50.000 5.01 0.00 0.00 3.18
4596 5218 3.634910 GAGGTTAAAGGCCACAGTCAAAA 59.365 43.478 5.01 0.00 0.00 2.44
4598 5220 4.653801 AGGTTAAAGGCCACAGTCAAAAAT 59.346 37.500 5.01 0.00 0.00 1.82
4600 5222 5.465390 GGTTAAAGGCCACAGTCAAAAATTC 59.535 40.000 5.01 0.00 0.00 2.17
4624 5246 4.918810 GGTTAAGCACCAATATTCCTGG 57.081 45.455 0.00 0.00 46.42 4.45
4626 5248 4.709886 GGTTAAGCACCAATATTCCTGGTT 59.290 41.667 0.00 9.94 45.13 3.67
4627 5249 5.889289 GGTTAAGCACCAATATTCCTGGTTA 59.111 40.000 0.00 8.49 45.13 2.85
4628 5250 6.378848 GGTTAAGCACCAATATTCCTGGTTAA 59.621 38.462 15.79 15.79 45.13 2.01
4629 5251 7.416326 GGTTAAGCACCAATATTCCTGGTTAAG 60.416 40.741 18.23 3.04 45.13 1.85
4630 5252 3.954258 AGCACCAATATTCCTGGTTAAGC 59.046 43.478 0.00 0.00 45.13 3.09
4631 5253 3.699038 GCACCAATATTCCTGGTTAAGCA 59.301 43.478 7.22 7.22 45.13 3.91
4687 5309 8.205512 TGAAGTTACAGACCAAAGTAATGTACA 58.794 33.333 0.00 0.00 33.30 2.90
5179 7304 2.800544 CCACACAACTACGGTTCTCTTG 59.199 50.000 0.00 0.00 32.73 3.02
5195 7320 7.103641 GGTTCTCTTGTATGTGTTGGAAGATA 58.896 38.462 0.00 0.00 0.00 1.98
5196 7321 7.064728 GGTTCTCTTGTATGTGTTGGAAGATAC 59.935 40.741 0.00 0.00 0.00 2.24
5197 7322 7.482169 TCTCTTGTATGTGTTGGAAGATACT 57.518 36.000 0.00 0.00 0.00 2.12
5269 7394 6.518208 AATTTATGCATGGCAAGCAAAATT 57.482 29.167 26.14 26.14 46.27 1.82
5270 7395 4.948608 TTATGCATGGCAAGCAAAATTG 57.051 36.364 22.04 0.00 46.27 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.353938 CGGTAGGTGCTAAGCAGTTATAAA 58.646 41.667 0.00 0.00 40.08 1.40
1 2 4.738541 GCGGTAGGTGCTAAGCAGTTATAA 60.739 45.833 0.00 0.00 40.08 0.98
2 3 3.243636 GCGGTAGGTGCTAAGCAGTTATA 60.244 47.826 0.00 0.00 40.08 0.98
3 4 2.483188 GCGGTAGGTGCTAAGCAGTTAT 60.483 50.000 0.00 0.00 40.08 1.89
4 5 1.134907 GCGGTAGGTGCTAAGCAGTTA 60.135 52.381 0.00 0.00 40.08 2.24
5 6 0.391263 GCGGTAGGTGCTAAGCAGTT 60.391 55.000 0.00 0.00 40.08 3.16
6 7 1.218316 GCGGTAGGTGCTAAGCAGT 59.782 57.895 0.00 0.00 40.08 4.40
7 8 1.521681 GGCGGTAGGTGCTAAGCAG 60.522 63.158 0.00 0.00 40.08 4.24
8 9 2.582436 GGCGGTAGGTGCTAAGCA 59.418 61.111 0.00 0.00 35.60 3.91
9 10 2.585247 CGGCGGTAGGTGCTAAGC 60.585 66.667 0.00 0.00 0.00 3.09
10 11 2.106332 CCGGCGGTAGGTGCTAAG 59.894 66.667 19.97 0.00 0.00 2.18
11 12 2.362760 TCCGGCGGTAGGTGCTAA 60.363 61.111 27.32 0.00 0.00 3.09
12 13 2.831742 CTCCGGCGGTAGGTGCTA 60.832 66.667 27.32 2.13 0.00 3.49
14 15 4.509737 GACTCCGGCGGTAGGTGC 62.510 72.222 27.32 11.51 0.00 5.01
15 16 2.754658 AGACTCCGGCGGTAGGTG 60.755 66.667 27.32 13.94 0.00 4.00
16 17 2.754658 CAGACTCCGGCGGTAGGT 60.755 66.667 27.32 21.77 0.00 3.08
17 18 2.754658 ACAGACTCCGGCGGTAGG 60.755 66.667 27.32 18.75 0.00 3.18
18 19 2.044555 TCACAGACTCCGGCGGTAG 61.045 63.158 27.32 22.57 0.00 3.18
19 20 2.034532 TCACAGACTCCGGCGGTA 59.965 61.111 27.32 11.85 0.00 4.02
20 21 3.681835 GTCACAGACTCCGGCGGT 61.682 66.667 27.32 7.44 0.00 5.68
21 22 4.778415 CGTCACAGACTCCGGCGG 62.778 72.222 22.51 22.51 0.00 6.13
22 23 4.778415 CCGTCACAGACTCCGGCG 62.778 72.222 0.00 0.00 33.20 6.46
23 24 1.870055 TTACCGTCACAGACTCCGGC 61.870 60.000 0.00 0.00 44.14 6.13
24 25 0.815734 ATTACCGTCACAGACTCCGG 59.184 55.000 0.00 0.00 45.72 5.14
25 26 1.201647 ACATTACCGTCACAGACTCCG 59.798 52.381 0.00 0.00 0.00 4.63
26 27 2.993899 CAACATTACCGTCACAGACTCC 59.006 50.000 0.00 0.00 0.00 3.85
27 28 2.412089 GCAACATTACCGTCACAGACTC 59.588 50.000 0.00 0.00 0.00 3.36
28 29 2.224185 TGCAACATTACCGTCACAGACT 60.224 45.455 0.00 0.00 0.00 3.24
29 30 2.139917 TGCAACATTACCGTCACAGAC 58.860 47.619 0.00 0.00 0.00 3.51
30 31 2.535012 TGCAACATTACCGTCACAGA 57.465 45.000 0.00 0.00 0.00 3.41
31 32 3.188254 TCAATGCAACATTACCGTCACAG 59.812 43.478 0.00 0.00 0.00 3.66
32 33 3.058570 GTCAATGCAACATTACCGTCACA 60.059 43.478 0.00 0.00 0.00 3.58
33 34 3.188460 AGTCAATGCAACATTACCGTCAC 59.812 43.478 0.00 0.00 0.00 3.67
34 35 3.407698 AGTCAATGCAACATTACCGTCA 58.592 40.909 0.00 0.00 0.00 4.35
35 36 4.201783 GGTAGTCAATGCAACATTACCGTC 60.202 45.833 0.00 0.00 0.00 4.79
36 37 3.687698 GGTAGTCAATGCAACATTACCGT 59.312 43.478 0.00 0.00 0.00 4.83
37 38 3.242284 CGGTAGTCAATGCAACATTACCG 60.242 47.826 18.90 18.90 43.81 4.02
38 39 3.486875 GCGGTAGTCAATGCAACATTACC 60.487 47.826 0.00 0.00 0.00 2.85
39 40 3.486875 GGCGGTAGTCAATGCAACATTAC 60.487 47.826 0.00 0.00 0.00 1.89
40 41 2.680841 GGCGGTAGTCAATGCAACATTA 59.319 45.455 0.00 0.00 0.00 1.90
41 42 1.472480 GGCGGTAGTCAATGCAACATT 59.528 47.619 0.00 0.00 0.00 2.71
42 43 1.094785 GGCGGTAGTCAATGCAACAT 58.905 50.000 0.00 0.00 0.00 2.71
43 44 0.250510 TGGCGGTAGTCAATGCAACA 60.251 50.000 0.00 0.00 0.00 3.33
44 45 0.447801 CTGGCGGTAGTCAATGCAAC 59.552 55.000 0.00 0.00 0.00 4.17
45 46 0.036164 ACTGGCGGTAGTCAATGCAA 59.964 50.000 0.00 0.00 0.00 4.08
46 47 0.673333 CACTGGCGGTAGTCAATGCA 60.673 55.000 0.00 0.00 0.00 3.96
47 48 0.673644 ACACTGGCGGTAGTCAATGC 60.674 55.000 0.00 0.00 31.60 3.56
48 49 1.066858 AGACACTGGCGGTAGTCAATG 60.067 52.381 22.33 4.55 35.05 2.82
49 50 1.066858 CAGACACTGGCGGTAGTCAAT 60.067 52.381 22.33 7.82 32.44 2.57
50 51 0.317160 CAGACACTGGCGGTAGTCAA 59.683 55.000 22.33 0.00 32.44 3.18
51 52 1.964448 CAGACACTGGCGGTAGTCA 59.036 57.895 22.33 0.00 32.44 3.41
52 53 1.446272 GCAGACACTGGCGGTAGTC 60.446 63.158 16.40 16.40 31.21 2.59
53 54 2.657237 GCAGACACTGGCGGTAGT 59.343 61.111 0.00 0.00 31.21 2.73
66 67 0.454600 GTTCACCCTATCGTCGCAGA 59.545 55.000 0.00 0.00 0.00 4.26
67 68 0.172578 TGTTCACCCTATCGTCGCAG 59.827 55.000 0.00 0.00 0.00 5.18
68 69 0.172578 CTGTTCACCCTATCGTCGCA 59.827 55.000 0.00 0.00 0.00 5.10
69 70 0.172803 ACTGTTCACCCTATCGTCGC 59.827 55.000 0.00 0.00 0.00 5.19
70 71 2.941064 TCTACTGTTCACCCTATCGTCG 59.059 50.000 0.00 0.00 0.00 5.12
71 72 4.978083 TTCTACTGTTCACCCTATCGTC 57.022 45.455 0.00 0.00 0.00 4.20
72 73 5.476614 GTTTTCTACTGTTCACCCTATCGT 58.523 41.667 0.00 0.00 0.00 3.73
73 74 4.561606 CGTTTTCTACTGTTCACCCTATCG 59.438 45.833 0.00 0.00 0.00 2.92
74 75 4.868734 CCGTTTTCTACTGTTCACCCTATC 59.131 45.833 0.00 0.00 0.00 2.08
75 76 4.828829 CCGTTTTCTACTGTTCACCCTAT 58.171 43.478 0.00 0.00 0.00 2.57
76 77 3.555586 GCCGTTTTCTACTGTTCACCCTA 60.556 47.826 0.00 0.00 0.00 3.53
77 78 2.809299 GCCGTTTTCTACTGTTCACCCT 60.809 50.000 0.00 0.00 0.00 4.34
78 79 1.534163 GCCGTTTTCTACTGTTCACCC 59.466 52.381 0.00 0.00 0.00 4.61
79 80 1.534163 GGCCGTTTTCTACTGTTCACC 59.466 52.381 0.00 0.00 0.00 4.02
80 81 1.193874 CGGCCGTTTTCTACTGTTCAC 59.806 52.381 19.50 0.00 0.00 3.18
81 82 1.504359 CGGCCGTTTTCTACTGTTCA 58.496 50.000 19.50 0.00 0.00 3.18
82 83 0.794473 CCGGCCGTTTTCTACTGTTC 59.206 55.000 26.12 0.00 0.00 3.18
83 84 0.107268 ACCGGCCGTTTTCTACTGTT 59.893 50.000 26.12 0.00 0.00 3.16
84 85 0.601841 CACCGGCCGTTTTCTACTGT 60.602 55.000 26.12 8.36 0.00 3.55
85 86 0.601841 ACACCGGCCGTTTTCTACTG 60.602 55.000 26.12 7.62 0.00 2.74
86 87 0.107268 AACACCGGCCGTTTTCTACT 59.893 50.000 26.12 0.00 0.00 2.57
87 88 0.946528 AAACACCGGCCGTTTTCTAC 59.053 50.000 26.12 0.00 32.76 2.59
88 89 2.224257 ACTAAACACCGGCCGTTTTCTA 60.224 45.455 26.12 8.77 37.69 2.10
89 90 1.232119 CTAAACACCGGCCGTTTTCT 58.768 50.000 26.12 7.99 37.69 2.52
90 91 0.946528 ACTAAACACCGGCCGTTTTC 59.053 50.000 26.12 0.00 37.69 2.29
91 92 1.065851 CAACTAAACACCGGCCGTTTT 59.934 47.619 26.12 20.94 37.69 2.43
92 93 0.664224 CAACTAAACACCGGCCGTTT 59.336 50.000 26.12 22.04 39.75 3.60
93 94 0.179051 TCAACTAAACACCGGCCGTT 60.179 50.000 26.12 14.39 0.00 4.44
94 95 0.601841 CTCAACTAAACACCGGCCGT 60.602 55.000 26.12 9.63 0.00 5.68
95 96 0.601841 ACTCAACTAAACACCGGCCG 60.602 55.000 21.04 21.04 0.00 6.13
96 97 1.265905 CAACTCAACTAAACACCGGCC 59.734 52.381 0.00 0.00 0.00 6.13
97 98 2.032290 GTCAACTCAACTAAACACCGGC 60.032 50.000 0.00 0.00 0.00 6.13
98 99 2.220133 CGTCAACTCAACTAAACACCGG 59.780 50.000 0.00 0.00 0.00 5.28
99 100 2.861935 ACGTCAACTCAACTAAACACCG 59.138 45.455 0.00 0.00 0.00 4.94
100 101 3.545426 GCACGTCAACTCAACTAAACACC 60.545 47.826 0.00 0.00 0.00 4.16
101 102 3.062909 TGCACGTCAACTCAACTAAACAC 59.937 43.478 0.00 0.00 0.00 3.32
102 103 3.263261 TGCACGTCAACTCAACTAAACA 58.737 40.909 0.00 0.00 0.00 2.83
103 104 3.936902 TGCACGTCAACTCAACTAAAC 57.063 42.857 0.00 0.00 0.00 2.01
104 105 4.123506 TCATGCACGTCAACTCAACTAAA 58.876 39.130 0.00 0.00 0.00 1.85
105 106 3.723260 TCATGCACGTCAACTCAACTAA 58.277 40.909 0.00 0.00 0.00 2.24
106 107 3.243737 ACTCATGCACGTCAACTCAACTA 60.244 43.478 0.00 0.00 0.00 2.24
107 108 2.138320 CTCATGCACGTCAACTCAACT 58.862 47.619 0.00 0.00 0.00 3.16
108 109 1.867233 ACTCATGCACGTCAACTCAAC 59.133 47.619 0.00 0.00 0.00 3.18
109 110 1.866601 CACTCATGCACGTCAACTCAA 59.133 47.619 0.00 0.00 0.00 3.02
110 111 1.501169 CACTCATGCACGTCAACTCA 58.499 50.000 0.00 0.00 0.00 3.41
122 123 3.264897 GGCGGTAGCGCACTCATG 61.265 66.667 36.52 0.00 46.35 3.07
123 124 4.873129 CGGCGGTAGCGCACTCAT 62.873 66.667 36.52 0.00 46.35 2.90
127 128 4.789075 TTCTCGGCGGTAGCGCAC 62.789 66.667 36.52 25.11 46.35 5.34
128 129 2.845752 AAATTCTCGGCGGTAGCGCA 62.846 55.000 36.52 19.22 46.35 6.09
129 130 2.090604 GAAATTCTCGGCGGTAGCGC 62.091 60.000 30.03 30.03 46.35 5.92
130 131 1.808234 CGAAATTCTCGGCGGTAGCG 61.808 60.000 10.57 10.57 46.35 4.26
131 132 1.925052 CGAAATTCTCGGCGGTAGC 59.075 57.895 7.21 0.00 44.20 3.58
201 202 2.667199 TCGTCGTCACCGAGCTCA 60.667 61.111 15.40 0.00 45.26 4.26
237 238 1.447317 CGTTCTGGGCTGCACAGTTT 61.447 55.000 29.31 0.00 37.25 2.66
243 244 1.074775 ATTTCCGTTCTGGGCTGCA 59.925 52.632 0.50 0.00 38.76 4.41
246 247 2.643551 CATACATTTCCGTTCTGGGCT 58.356 47.619 0.00 0.00 38.76 5.19
261 262 1.118965 ATCGATCGGTGGCCCATACA 61.119 55.000 16.41 0.00 0.00 2.29
326 327 0.793861 TACACAATTTCGTCGGCAGC 59.206 50.000 0.00 0.00 0.00 5.25
339 340 2.479837 GTACAGCACAGCAGTACACAA 58.520 47.619 16.49 0.00 46.06 3.33
365 374 0.838608 ACCCCTCGTGGTAAAACACA 59.161 50.000 2.33 0.00 41.38 3.72
408 417 3.879885 CCGTGTGGGTGGGGTCAA 61.880 66.667 0.00 0.00 0.00 3.18
473 524 1.080230 CCGAGTGAGTGGCTGAGTG 60.080 63.158 0.00 0.00 0.00 3.51
474 525 1.531840 ACCGAGTGAGTGGCTGAGT 60.532 57.895 0.00 0.00 0.00 3.41
475 526 1.080230 CACCGAGTGAGTGGCTGAG 60.080 63.158 0.00 0.00 35.23 3.35
476 527 3.051210 CACCGAGTGAGTGGCTGA 58.949 61.111 0.00 0.00 35.23 4.26
477 528 2.740055 GCACCGAGTGAGTGGCTG 60.740 66.667 8.04 0.00 35.23 4.85
478 529 4.363990 CGCACCGAGTGAGTGGCT 62.364 66.667 8.04 0.00 35.23 4.75
480 531 4.662961 TGCGCACCGAGTGAGTGG 62.663 66.667 5.66 0.00 35.84 4.00
481 532 3.406361 GTGCGCACCGAGTGAGTG 61.406 66.667 30.12 0.00 35.84 3.51
482 533 4.664677 GGTGCGCACCGAGTGAGT 62.665 66.667 41.21 0.00 42.29 3.41
491 542 1.794222 GAATAGTGGTGGTGCGCAC 59.206 57.895 32.15 32.15 0.00 5.34
492 543 1.739929 CGAATAGTGGTGGTGCGCA 60.740 57.895 5.66 5.66 0.00 6.09
493 544 1.296056 AACGAATAGTGGTGGTGCGC 61.296 55.000 0.00 0.00 0.00 6.09
494 545 1.127951 GAAACGAATAGTGGTGGTGCG 59.872 52.381 0.00 0.00 0.00 5.34
495 546 1.467342 GGAAACGAATAGTGGTGGTGC 59.533 52.381 0.00 0.00 0.00 5.01
496 547 2.081462 GGGAAACGAATAGTGGTGGTG 58.919 52.381 0.00 0.00 0.00 4.17
497 548 1.982958 AGGGAAACGAATAGTGGTGGT 59.017 47.619 0.00 0.00 0.00 4.16
498 549 2.356135 CAGGGAAACGAATAGTGGTGG 58.644 52.381 0.00 0.00 0.00 4.61
499 550 2.027561 TCCAGGGAAACGAATAGTGGTG 60.028 50.000 0.00 0.00 0.00 4.17
500 551 2.262637 TCCAGGGAAACGAATAGTGGT 58.737 47.619 0.00 0.00 0.00 4.16
501 552 3.467803 GATCCAGGGAAACGAATAGTGG 58.532 50.000 0.00 0.00 0.00 4.00
519 570 2.474816 GAGTACATCCAACTGCCGATC 58.525 52.381 0.00 0.00 0.00 3.69
520 571 1.202417 CGAGTACATCCAACTGCCGAT 60.202 52.381 0.00 0.00 0.00 4.18
526 577 1.673033 GCAGTGCGAGTACATCCAACT 60.673 52.381 0.00 0.00 0.00 3.16
539 607 0.884704 AGTGGGTTAAGTGCAGTGCG 60.885 55.000 11.20 0.00 0.00 5.34
540 608 2.178912 TAGTGGGTTAAGTGCAGTGC 57.821 50.000 8.58 8.58 0.00 4.40
543 611 6.710597 TCTACTATAGTGGGTTAAGTGCAG 57.289 41.667 15.90 0.38 0.00 4.41
544 612 7.125204 ACATTCTACTATAGTGGGTTAAGTGCA 59.875 37.037 15.90 0.00 0.00 4.57
547 615 8.483758 CCAACATTCTACTATAGTGGGTTAAGT 58.516 37.037 15.90 5.50 0.00 2.24
549 617 8.262227 CACCAACATTCTACTATAGTGGGTTAA 58.738 37.037 15.90 3.67 0.00 2.01
550 618 7.147620 CCACCAACATTCTACTATAGTGGGTTA 60.148 40.741 15.90 2.80 38.83 2.85
551 619 6.352737 CCACCAACATTCTACTATAGTGGGTT 60.353 42.308 15.90 9.19 38.83 4.11
552 620 5.130477 CCACCAACATTCTACTATAGTGGGT 59.870 44.000 15.90 3.42 38.83 4.51
553 621 5.611374 CCACCAACATTCTACTATAGTGGG 58.389 45.833 15.90 8.29 38.83 4.61
555 623 4.745125 CGCCACCAACATTCTACTATAGTG 59.255 45.833 15.90 5.89 0.00 2.74
556 624 4.647853 TCGCCACCAACATTCTACTATAGT 59.352 41.667 10.87 10.87 0.00 2.12
558 626 5.303333 TCATCGCCACCAACATTCTACTATA 59.697 40.000 0.00 0.00 0.00 1.31
559 627 4.100963 TCATCGCCACCAACATTCTACTAT 59.899 41.667 0.00 0.00 0.00 2.12
560 628 3.449377 TCATCGCCACCAACATTCTACTA 59.551 43.478 0.00 0.00 0.00 1.82
561 629 2.236146 TCATCGCCACCAACATTCTACT 59.764 45.455 0.00 0.00 0.00 2.57
562 630 2.351726 GTCATCGCCACCAACATTCTAC 59.648 50.000 0.00 0.00 0.00 2.59
587 675 0.532573 ATCGGTCGCTTGTGTCTGAT 59.467 50.000 0.00 0.00 0.00 2.90
622 712 5.218885 TGGTTTATTTTCACGTGATGCAAG 58.781 37.500 20.80 0.00 0.00 4.01
651 741 3.891977 TCGATGAGGGAGAGGTAATTGAG 59.108 47.826 0.00 0.00 0.00 3.02
660 750 2.896044 TGGAATCATCGATGAGGGAGAG 59.104 50.000 30.11 1.48 40.64 3.20
661 751 2.896044 CTGGAATCATCGATGAGGGAGA 59.104 50.000 30.11 13.70 40.64 3.71
662 752 2.612471 GCTGGAATCATCGATGAGGGAG 60.612 54.545 30.11 22.31 40.64 4.30
663 753 1.345741 GCTGGAATCATCGATGAGGGA 59.654 52.381 30.11 14.63 40.64 4.20
665 755 2.141517 GTGCTGGAATCATCGATGAGG 58.858 52.381 30.11 18.29 40.64 3.86
691 803 1.072331 AGGGCACTGTGGAAAGTACTG 59.928 52.381 10.21 0.00 0.00 2.74
701 816 0.458543 CTACACGCTAGGGCACTGTG 60.459 60.000 6.73 0.00 38.60 3.66
760 886 3.726607 ACGTACGGACACAATAAAACCA 58.273 40.909 21.06 0.00 0.00 3.67
872 1003 2.211410 CGAGGTGTGGGTGTGGGTA 61.211 63.158 0.00 0.00 0.00 3.69
891 1024 1.674057 GTGGAGTGGAGTGGAGTGG 59.326 63.158 0.00 0.00 0.00 4.00
976 1119 0.825410 GTGGTTCGTTTGGGGGTTTT 59.175 50.000 0.00 0.00 0.00 2.43
980 1123 1.102222 TTTCGTGGTTCGTTTGGGGG 61.102 55.000 0.00 0.00 40.80 5.40
1095 1262 3.423154 CCTTTCGTGGGCAGCGTC 61.423 66.667 0.30 0.00 0.00 5.19
1614 1781 3.691342 TGGTTGGAGTCGAGGCGG 61.691 66.667 0.00 0.00 0.00 6.13
1931 2098 3.303395 CGTCTTCTTCTTCACTTTGTGCC 60.303 47.826 0.00 0.00 32.98 5.01
1956 2123 1.002366 AAGCAATCGCGACAGTCATC 58.998 50.000 12.93 0.00 45.49 2.92
2241 2408 0.459934 GCTGCTCCAGACTGTAGCTG 60.460 60.000 19.41 19.03 38.54 4.24
2340 2507 0.803768 CCAGCCTCTTGACGATGACG 60.804 60.000 0.00 0.00 45.75 4.35
2463 2630 0.322906 CCTCCTTGGCCTGGAAGAAC 60.323 60.000 16.74 0.00 34.07 3.01
2559 2726 4.402155 AGAATCTACTCTGAGGAGCAACAG 59.598 45.833 12.25 0.00 42.98 3.16
2619 2787 5.422666 TTCAAGTATAATGGCAGCAATCG 57.577 39.130 0.00 0.00 0.00 3.34
2658 2826 5.480772 GCCTAGCCCACTCTACTGATAATAA 59.519 44.000 0.00 0.00 0.00 1.40
2704 2873 1.737838 TCGTTGCCATGTGAGGATTC 58.262 50.000 0.00 0.00 0.00 2.52
2725 2901 4.083110 CGTGCCAAGTCTTCTGAATTTCAT 60.083 41.667 0.00 0.00 0.00 2.57
2805 2981 0.982852 CCCATACAGCAGACCCCAGA 60.983 60.000 0.00 0.00 0.00 3.86
2806 2982 1.274703 ACCCATACAGCAGACCCCAG 61.275 60.000 0.00 0.00 0.00 4.45
2807 2983 0.844661 AACCCATACAGCAGACCCCA 60.845 55.000 0.00 0.00 0.00 4.96
2808 2984 0.394352 CAACCCATACAGCAGACCCC 60.394 60.000 0.00 0.00 0.00 4.95
2809 2985 0.618458 TCAACCCATACAGCAGACCC 59.382 55.000 0.00 0.00 0.00 4.46
2810 2986 2.684881 CAATCAACCCATACAGCAGACC 59.315 50.000 0.00 0.00 0.00 3.85
2811 2987 2.098117 GCAATCAACCCATACAGCAGAC 59.902 50.000 0.00 0.00 0.00 3.51
2939 3115 2.356535 CCCTTCCAGACAAAGGATGAGG 60.357 54.545 3.49 0.00 45.15 3.86
2958 3134 2.901042 CTTACTGCGAGGGGTCCC 59.099 66.667 0.00 0.00 0.00 4.46
2991 3167 4.990543 TGTTGTTTGATCTAGAACAGCG 57.009 40.909 2.71 0.00 39.07 5.18
3015 3191 4.584874 TGGCGTCCTTTTCATGAATCTAA 58.415 39.130 9.40 0.00 0.00 2.10
3033 3209 1.577328 AAAGTTGCGACCTCATGGCG 61.577 55.000 0.00 0.00 34.06 5.69
3046 3222 1.538849 GCCTTGACCCTTGCAAAGTTG 60.539 52.381 0.00 0.00 44.25 3.16
3047 3223 0.752658 GCCTTGACCCTTGCAAAGTT 59.247 50.000 0.00 0.00 44.25 2.66
3048 3224 1.455383 CGCCTTGACCCTTGCAAAGT 61.455 55.000 0.00 0.24 44.25 2.66
3049 3225 1.172180 TCGCCTTGACCCTTGCAAAG 61.172 55.000 0.00 0.00 45.69 2.77
3051 3227 1.896660 GTCGCCTTGACCCTTGCAA 60.897 57.895 0.00 0.00 42.04 4.08
3052 3228 2.281484 GTCGCCTTGACCCTTGCA 60.281 61.111 0.00 0.00 42.04 4.08
3106 3300 7.173735 CCAATTTCCAATTTCCCTTTCTCAAAG 59.826 37.037 0.00 0.00 38.24 2.77
3226 3420 8.710551 TGCAATTCTAAAGCAATTGTAACATTG 58.289 29.630 7.40 7.99 41.46 2.82
3286 3868 5.124776 GTCGGATCCAAATCAAATGGTAACA 59.875 40.000 13.41 0.00 42.31 2.41
3287 3869 5.124776 TGTCGGATCCAAATCAAATGGTAAC 59.875 40.000 13.41 0.00 39.09 2.50
3296 3886 3.981071 ACTTCTGTCGGATCCAAATCA 57.019 42.857 13.41 3.95 33.21 2.57
3318 3908 6.316140 TGGAGGATCAACTCATCAAATTTACG 59.684 38.462 0.00 0.00 39.27 3.18
3340 3930 1.039068 CCAACAACCAGCATTGTGGA 58.961 50.000 10.89 0.00 42.01 4.02
3360 3950 6.598753 ATGTACTGTGTTGTACTGTTGTTC 57.401 37.500 6.41 0.00 42.22 3.18
3447 4037 8.814038 AAAGGCTCACATCAATTTCTACTTAT 57.186 30.769 0.00 0.00 0.00 1.73
3476 4066 6.642950 ACAAATAAGCTCGCTATCACTGTATC 59.357 38.462 0.00 0.00 0.00 2.24
3479 4069 4.759782 ACAAATAAGCTCGCTATCACTGT 58.240 39.130 0.00 0.00 0.00 3.55
3499 4089 7.389330 AGTCGAACATAACCAACATATCAAACA 59.611 33.333 0.00 0.00 0.00 2.83
3528 4118 3.444034 TGGAGTACAGATAGACAGCACAC 59.556 47.826 0.00 0.00 0.00 3.82
3573 4168 9.216117 GGAAAGTTCTGTATAACAAGCTTAAGA 57.784 33.333 6.67 0.00 0.00 2.10
3574 4169 8.999431 TGGAAAGTTCTGTATAACAAGCTTAAG 58.001 33.333 0.00 0.00 0.00 1.85
3575 4170 8.780249 GTGGAAAGTTCTGTATAACAAGCTTAA 58.220 33.333 0.00 0.00 0.00 1.85
3610 4205 6.590068 AGGCTATGTTGATATCCTGATATGC 58.410 40.000 4.43 0.79 34.36 3.14
3646 4241 6.127952 GGTTCTAGTGCTATTAGAGTATCCGG 60.128 46.154 0.00 0.00 33.66 5.14
3672 4267 0.318445 GTGAAGCACCAGCAGCAAAG 60.318 55.000 0.00 0.00 45.49 2.77
3943 4538 1.725641 TTTCTGGTGCTCTGTATGCG 58.274 50.000 0.00 0.00 0.00 4.73
3985 4580 1.064825 AGACGTCTGATTTGGGGGTT 58.935 50.000 19.30 0.00 0.00 4.11
3988 4583 2.158900 AGCATAGACGTCTGATTTGGGG 60.159 50.000 28.12 8.88 0.00 4.96
4090 4685 2.028190 CTCCCCGACAGCGCATAG 59.972 66.667 11.47 0.64 35.83 2.23
4279 4880 2.170187 GACGACTAGGGTCTAGGAGTCA 59.830 54.545 18.12 0.00 38.59 3.41
4295 4896 1.134491 CCATTTCTACCAGGGGACGAC 60.134 57.143 0.00 0.00 0.00 4.34
4302 4909 4.202253 TGACATCGATCCATTTCTACCAGG 60.202 45.833 0.00 0.00 0.00 4.45
4303 4910 4.948847 TGACATCGATCCATTTCTACCAG 58.051 43.478 0.00 0.00 0.00 4.00
4307 4914 5.359756 CCAGTTGACATCGATCCATTTCTA 58.640 41.667 0.00 0.00 0.00 2.10
4308 4915 4.194640 CCAGTTGACATCGATCCATTTCT 58.805 43.478 0.00 0.00 0.00 2.52
4319 4926 0.537143 TGCACCACCCAGTTGACATC 60.537 55.000 0.00 0.00 0.00 3.06
4320 4927 0.112995 ATGCACCACCCAGTTGACAT 59.887 50.000 0.00 0.00 0.00 3.06
4321 4928 0.106268 AATGCACCACCCAGTTGACA 60.106 50.000 0.00 0.00 0.00 3.58
4322 4929 1.904287 TAATGCACCACCCAGTTGAC 58.096 50.000 0.00 0.00 0.00 3.18
4323 4930 2.620367 GGATAATGCACCACCCAGTTGA 60.620 50.000 0.00 0.00 0.00 3.18
4326 4933 0.258774 GGGATAATGCACCACCCAGT 59.741 55.000 13.07 0.00 40.20 4.00
4327 4934 0.258484 TGGGATAATGCACCACCCAG 59.742 55.000 15.67 0.00 44.50 4.45
4328 4935 2.403348 TGGGATAATGCACCACCCA 58.597 52.632 15.67 15.67 46.74 4.51
4331 4938 2.684881 CTCACTTGGGATAATGCACCAC 59.315 50.000 0.00 0.00 33.20 4.16
4334 4941 2.368439 TGCTCACTTGGGATAATGCAC 58.632 47.619 0.00 0.00 0.00 4.57
4356 4963 3.641437 GCAAACTGCATTCAACTACCA 57.359 42.857 0.00 0.00 44.26 3.25
4450 5057 1.328279 TTCGGAGCTCAAGAGACACA 58.672 50.000 17.19 0.00 0.00 3.72
4477 5084 5.674958 AGGGGGACAAACCTAACATATATGT 59.325 40.000 12.75 12.75 39.82 2.29
4483 5090 1.357761 CCAGGGGGACAAACCTAACAT 59.642 52.381 0.00 0.00 38.98 2.71
4485 5092 0.775542 ACCAGGGGGACAAACCTAAC 59.224 55.000 0.00 0.00 38.98 2.34
4486 5093 0.774908 CACCAGGGGGACAAACCTAA 59.225 55.000 0.00 0.00 38.98 2.69
4487 5094 0.402272 ACACCAGGGGGACAAACCTA 60.402 55.000 0.00 0.00 38.98 3.08
4488 5095 0.402272 TACACCAGGGGGACAAACCT 60.402 55.000 0.00 0.00 38.98 3.50
4489 5096 0.702316 ATACACCAGGGGGACAAACC 59.298 55.000 0.00 0.00 38.05 3.27
4490 5097 1.615919 CCATACACCAGGGGGACAAAC 60.616 57.143 0.00 0.00 38.05 2.93
4496 5112 0.926293 AACATCCATACACCAGGGGG 59.074 55.000 0.00 0.00 41.29 5.40
4572 5194 0.036306 ACTGTGGCCTTTAACCTCGG 59.964 55.000 3.32 0.00 34.03 4.63
4573 5195 1.270625 TGACTGTGGCCTTTAACCTCG 60.271 52.381 3.32 0.00 0.00 4.63
4588 5210 5.691754 GTGCTTAACCAGGAATTTTTGACTG 59.308 40.000 0.00 0.00 0.00 3.51
4624 5246 5.880332 TCCACATAGAAGATTGGTGCTTAAC 59.120 40.000 0.00 0.00 0.00 2.01
4625 5247 6.061022 TCCACATAGAAGATTGGTGCTTAA 57.939 37.500 0.00 0.00 0.00 1.85
4626 5248 5.425217 TCTCCACATAGAAGATTGGTGCTTA 59.575 40.000 0.00 0.00 0.00 3.09
4627 5249 4.225942 TCTCCACATAGAAGATTGGTGCTT 59.774 41.667 0.00 0.00 0.00 3.91
4628 5250 3.776969 TCTCCACATAGAAGATTGGTGCT 59.223 43.478 0.00 0.00 0.00 4.40
4629 5251 4.142609 TCTCCACATAGAAGATTGGTGC 57.857 45.455 0.00 0.00 0.00 5.01
4630 5252 8.915057 AATAATCTCCACATAGAAGATTGGTG 57.085 34.615 7.01 0.00 32.37 4.17
4687 5309 9.950496 AGTTGATCAATACTAATTCTCAACACT 57.050 29.630 12.12 0.00 41.67 3.55
4704 5331 1.162698 GCAGCAGCAGAGTTGATCAA 58.837 50.000 3.38 3.38 41.58 2.57
4799 6154 0.536233 TCTGCAGCTAAAACGGGCAA 60.536 50.000 9.47 0.00 33.58 4.52
4800 6155 0.536233 TTCTGCAGCTAAAACGGGCA 60.536 50.000 9.47 0.00 0.00 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.