Multiple sequence alignment - TraesCS2D01G510500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G510500 chr2D 100.000 4445 0 0 1 4445 602454450 602450006 0.000000e+00 8209.0
1 TraesCS2D01G510500 chr2D 77.865 1143 239 12 2728 3866 651648800 651649932 0.000000e+00 697.0
2 TraesCS2D01G510500 chr2D 100.000 131 0 0 4821 4951 602449630 602449500 4.950000e-60 243.0
3 TraesCS2D01G510500 chr2B 93.217 2816 98 35 1405 4200 732569920 732567178 0.000000e+00 4056.0
4 TraesCS2D01G510500 chr2B 88.491 1425 78 24 1 1399 732571322 732569958 0.000000e+00 1644.0
5 TraesCS2D01G510500 chr2A 90.251 1836 118 23 1 1794 734926671 734924855 0.000000e+00 2342.0
6 TraesCS2D01G510500 chr2A 77.312 1146 246 12 2728 3869 776022994 776021859 0.000000e+00 664.0
7 TraesCS2D01G510500 chr2A 92.308 130 9 1 4822 4951 711649831 711649959 3.040000e-42 183.0
8 TraesCS2D01G510500 chr2A 94.030 67 1 2 1972 2037 734924681 734924617 1.130000e-16 99.0
9 TraesCS2D01G510500 chr1A 85.238 1260 174 11 2727 3980 104921314 104920061 0.000000e+00 1286.0
10 TraesCS2D01G510500 chr1A 77.460 559 93 26 2167 2713 104921932 104921395 2.240000e-78 303.0
11 TraesCS2D01G510500 chr1A 82.759 116 16 4 1151 1263 104922085 104921971 3.150000e-17 100.0
12 TraesCS2D01G510500 chr1D 85.150 1266 175 12 2721 3980 100661891 100663149 0.000000e+00 1284.0
13 TraesCS2D01G510500 chr1D 87.047 193 21 3 2522 2713 100661625 100661814 1.080000e-51 215.0
14 TraesCS2D01G510500 chr1D 81.034 116 16 5 1151 1263 100661156 100661268 2.460000e-13 87.9
15 TraesCS2D01G510500 chr1B 84.988 1259 178 10 2727 3980 151070707 151069455 0.000000e+00 1267.0
16 TraesCS2D01G510500 chr1B 86.857 175 21 2 2543 2716 151070965 151070792 1.410000e-45 195.0
17 TraesCS2D01G510500 chr1B 89.831 59 6 0 1164 1222 151071467 151071409 5.310000e-10 76.8
18 TraesCS2D01G510500 chr5A 77.348 1395 275 29 2535 3910 400418527 400419899 0.000000e+00 787.0
19 TraesCS2D01G510500 chr5A 77.394 1389 273 29 2541 3910 400495082 400493716 0.000000e+00 787.0
20 TraesCS2D01G510500 chrUn 77.787 1148 237 16 2728 3869 23653088 23651953 0.000000e+00 691.0
21 TraesCS2D01G510500 chr5B 79.406 471 81 11 3445 3910 339472954 339473413 8.000000e-83 318.0
22 TraesCS2D01G510500 chr6B 96.183 131 4 1 4821 4951 201432678 201432549 3.880000e-51 213.0
23 TraesCS2D01G510500 chr7D 94.656 131 6 1 4821 4951 534724944 534724815 8.400000e-48 202.0
24 TraesCS2D01G510500 chr4A 94.656 131 6 1 4821 4951 718515672 718515543 8.400000e-48 202.0
25 TraesCS2D01G510500 chr6A 93.077 130 8 1 4822 4951 73461541 73461669 6.540000e-44 189.0
26 TraesCS2D01G510500 chr4D 92.424 132 9 1 4821 4951 64088471 64088602 2.350000e-43 187.0
27 TraesCS2D01G510500 chr3B 92.366 131 10 0 4821 4951 373848090 373848220 2.350000e-43 187.0
28 TraesCS2D01G510500 chr5D 91.667 132 9 2 4821 4951 512897036 512897166 1.090000e-41 182.0
29 TraesCS2D01G510500 chr7B 94.118 119 6 1 4833 4951 169532841 169532724 3.940000e-41 180.0
30 TraesCS2D01G510500 chr4B 86.066 122 9 5 1817 1937 45194199 45194085 1.870000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G510500 chr2D 602449500 602454450 4950 True 4226.000000 8209 100.000000 1 4951 2 chr2D.!!$R1 4950
1 TraesCS2D01G510500 chr2D 651648800 651649932 1132 False 697.000000 697 77.865000 2728 3866 1 chr2D.!!$F1 1138
2 TraesCS2D01G510500 chr2B 732567178 732571322 4144 True 2850.000000 4056 90.854000 1 4200 2 chr2B.!!$R1 4199
3 TraesCS2D01G510500 chr2A 734924617 734926671 2054 True 1220.500000 2342 92.140500 1 2037 2 chr2A.!!$R2 2036
4 TraesCS2D01G510500 chr2A 776021859 776022994 1135 True 664.000000 664 77.312000 2728 3869 1 chr2A.!!$R1 1141
5 TraesCS2D01G510500 chr1A 104920061 104922085 2024 True 563.000000 1286 81.819000 1151 3980 3 chr1A.!!$R1 2829
6 TraesCS2D01G510500 chr1D 100661156 100663149 1993 False 528.966667 1284 84.410333 1151 3980 3 chr1D.!!$F1 2829
7 TraesCS2D01G510500 chr1B 151069455 151071467 2012 True 512.933333 1267 87.225333 1164 3980 3 chr1B.!!$R1 2816
8 TraesCS2D01G510500 chr5A 400418527 400419899 1372 False 787.000000 787 77.348000 2535 3910 1 chr5A.!!$F1 1375
9 TraesCS2D01G510500 chr5A 400493716 400495082 1366 True 787.000000 787 77.394000 2541 3910 1 chr5A.!!$R1 1369
10 TraesCS2D01G510500 chrUn 23651953 23653088 1135 True 691.000000 691 77.787000 2728 3869 1 chrUn.!!$R1 1141

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
867 890 0.600255 ACGCCACCTTGTTCTTCTCG 60.600 55.000 0.0 0.0 0.0 4.04 F
2337 2439 1.301401 CCGACGCCAAGAACAAGGA 60.301 57.895 0.0 0.0 0.0 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2520 2643 0.886043 TATGCGTGCATGGAGCCATC 60.886 55.0 17.21 0.0 44.83 3.51 R
4205 4428 0.033796 TCCGAACGGAGGGAGTGTAT 60.034 55.0 12.04 0.0 39.76 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 1.451387 GGGACATGGTTACTGCGGG 60.451 63.158 0.00 0.00 0.00 6.13
63 64 3.602483 GGGTACCGAAAATTACTGAGCA 58.398 45.455 5.65 0.00 40.86 4.26
79 85 4.213482 ACTGAGCAGATACCGTTCAAAAAC 59.787 41.667 4.21 0.00 0.00 2.43
82 88 5.298276 TGAGCAGATACCGTTCAAAAACTTT 59.702 36.000 0.00 0.00 32.95 2.66
159 165 3.203716 GGATTGACCGGGAACTATTGTC 58.796 50.000 6.32 0.00 0.00 3.18
164 170 2.165030 GACCGGGAACTATTGTCGAAGA 59.835 50.000 6.32 0.00 0.00 2.87
231 237 3.669290 CGTGTTATGCAAGAATTTCCGCA 60.669 43.478 12.05 12.05 39.01 5.69
254 260 3.814005 AGTTAACTATACCTGCACCGG 57.186 47.619 6.26 0.00 0.00 5.28
266 272 2.223923 CCTGCACCGGTCAAATTCAAAA 60.224 45.455 2.59 0.00 0.00 2.44
270 276 4.878397 TGCACCGGTCAAATTCAAAATTTT 59.122 33.333 2.59 0.00 0.00 1.82
274 280 7.467623 CACCGGTCAAATTCAAAATTTTCAAA 58.532 30.769 2.59 0.00 0.00 2.69
345 359 2.357760 GGAACTGCGCGGTTACCA 60.358 61.111 33.24 0.00 0.00 3.25
371 385 0.742990 TCAGGCGGTAATCAAAGCGG 60.743 55.000 0.00 0.00 40.57 5.52
387 401 1.299468 CGGTGATCGAGCTAGCCAC 60.299 63.158 12.13 11.65 42.43 5.01
389 403 1.725557 GGTGATCGAGCTAGCCACGA 61.726 60.000 27.70 27.70 40.18 4.35
412 426 6.128172 CGACCATTCAAAACTAGCAAAGAGAT 60.128 38.462 0.00 0.00 0.00 2.75
414 428 8.635765 ACCATTCAAAACTAGCAAAGAGATAA 57.364 30.769 0.00 0.00 0.00 1.75
416 430 9.727627 CCATTCAAAACTAGCAAAGAGATAATC 57.272 33.333 0.00 0.00 0.00 1.75
726 741 3.551551 CATCTGTGCATGCGTTCATATG 58.448 45.455 14.09 14.92 0.00 1.78
727 742 1.941975 TCTGTGCATGCGTTCATATGG 59.058 47.619 14.09 1.28 0.00 2.74
728 743 1.002142 CTGTGCATGCGTTCATATGGG 60.002 52.381 14.09 0.00 0.00 4.00
729 744 1.308047 GTGCATGCGTTCATATGGGA 58.692 50.000 14.09 0.00 0.00 4.37
730 745 1.881973 GTGCATGCGTTCATATGGGAT 59.118 47.619 14.09 0.00 0.00 3.85
771 790 6.642540 GCCATAAATAGCAAGATTTAACTGCC 59.357 38.462 3.49 0.00 35.47 4.85
867 890 0.600255 ACGCCACCTTGTTCTTCTCG 60.600 55.000 0.00 0.00 0.00 4.04
937 962 3.539604 CATCAACTGAACCATCTCTCCC 58.460 50.000 0.00 0.00 0.00 4.30
938 963 1.909302 TCAACTGAACCATCTCTCCCC 59.091 52.381 0.00 0.00 0.00 4.81
1074 1099 9.674068 GGTTAGATTTCTCCACTTTATCTTTCT 57.326 33.333 0.00 0.00 0.00 2.52
1095 1122 4.941263 TCTCATTCCAGTTTGTAATTCCGG 59.059 41.667 0.00 0.00 0.00 5.14
1125 1152 1.541379 GTTCTTGGGGTTTATGCGGT 58.459 50.000 0.00 0.00 0.00 5.68
1330 1369 3.624326 TCGTTTGGCATGACAAAAGAG 57.376 42.857 31.01 22.89 41.55 2.85
1336 1375 6.018832 CGTTTGGCATGACAAAAGAGAAAATT 60.019 34.615 29.40 0.00 41.53 1.82
1386 1439 6.744112 AGACAAAACGGAAATTTGCTGATAA 58.256 32.000 8.14 0.00 40.58 1.75
1387 1440 6.640907 AGACAAAACGGAAATTTGCTGATAAC 59.359 34.615 8.14 0.00 40.58 1.89
1393 1446 9.535878 AAACGGAAATTTGCTGATAACTTTTAA 57.464 25.926 8.14 0.00 0.00 1.52
1395 1448 8.974408 ACGGAAATTTGCTGATAACTTTTAAAC 58.026 29.630 8.14 0.00 0.00 2.01
1396 1449 9.191995 CGGAAATTTGCTGATAACTTTTAAACT 57.808 29.630 8.14 0.00 0.00 2.66
1402 1455 9.462174 TTTGCTGATAACTTTTAAACTGACATG 57.538 29.630 0.00 0.00 0.00 3.21
1424 1510 7.283127 ACATGTTGCCTTACAGAATATACCAAG 59.717 37.037 0.00 0.00 0.00 3.61
1522 1608 6.806751 TGTTCTAGTAGCATGGAAGTACATC 58.193 40.000 0.00 0.00 0.00 3.06
1525 1611 4.046938 AGTAGCATGGAAGTACATCGTG 57.953 45.455 0.00 0.00 0.00 4.35
1573 1659 5.296151 TCTGGACCAACATTCATAGATCC 57.704 43.478 0.00 0.00 0.00 3.36
1666 1756 1.661341 CATACCAGCTCTTGAGCCAC 58.339 55.000 17.78 0.00 34.90 5.01
1852 1942 4.978083 AGTTGATGAGCATGACAAATCC 57.022 40.909 0.00 0.00 0.00 3.01
1859 1949 1.741706 AGCATGACAAATCCGCTTCAG 59.258 47.619 0.00 0.00 30.43 3.02
1931 2021 5.711506 TCCTCGCATCAATATTAATTGCCAT 59.288 36.000 0.00 0.00 41.96 4.40
1932 2022 6.883756 TCCTCGCATCAATATTAATTGCCATA 59.116 34.615 0.00 0.00 41.96 2.74
1969 2059 7.568199 TTTAGCATATGTCTAAAGCCTTTCC 57.432 36.000 19.59 0.00 32.78 3.13
2010 2100 8.640651 TGATTTCCAAAACTGATGAAAAGATCA 58.359 29.630 0.00 0.00 43.67 2.92
2054 2150 4.858850 TGCATCAACATTCCCTACAAGAT 58.141 39.130 0.00 0.00 0.00 2.40
2108 2204 4.446994 AAGGAAAGAATTGCAGCTTAGC 57.553 40.909 0.00 0.00 0.00 3.09
2109 2205 3.424703 AGGAAAGAATTGCAGCTTAGCA 58.575 40.909 7.07 0.00 43.99 3.49
2111 2207 4.097589 AGGAAAGAATTGCAGCTTAGCATC 59.902 41.667 7.07 0.00 45.19 3.91
2112 2208 4.142315 GGAAAGAATTGCAGCTTAGCATCA 60.142 41.667 7.07 0.17 45.19 3.07
2113 2209 4.634184 AAGAATTGCAGCTTAGCATCAG 57.366 40.909 7.07 0.00 45.19 2.90
2114 2210 3.882444 AGAATTGCAGCTTAGCATCAGA 58.118 40.909 7.07 0.00 45.19 3.27
2115 2211 4.267536 AGAATTGCAGCTTAGCATCAGAA 58.732 39.130 7.07 0.00 45.19 3.02
2118 2214 3.271055 TGCAGCTTAGCATCAGAATCA 57.729 42.857 7.07 0.00 40.11 2.57
2119 2215 3.203716 TGCAGCTTAGCATCAGAATCAG 58.796 45.455 7.07 0.00 40.11 2.90
2120 2216 2.548904 GCAGCTTAGCATCAGAATCAGG 59.451 50.000 7.07 0.00 0.00 3.86
2121 2217 3.743584 GCAGCTTAGCATCAGAATCAGGA 60.744 47.826 7.07 0.00 0.00 3.86
2122 2218 4.643463 CAGCTTAGCATCAGAATCAGGAT 58.357 43.478 7.07 0.00 0.00 3.24
2123 2219 4.691685 CAGCTTAGCATCAGAATCAGGATC 59.308 45.833 7.07 0.00 0.00 3.36
2138 2234 7.883833 AGAATCAGGATCAGGATTAATCACATG 59.116 37.037 17.07 11.83 34.06 3.21
2140 2236 7.325725 TCAGGATCAGGATTAATCACATGAT 57.674 36.000 20.96 20.96 36.07 2.45
2222 2318 1.812571 CTCTGTACAAAGGCGGCATTT 59.187 47.619 13.08 6.82 0.00 2.32
2249 2345 4.719369 GCGAGTTCGACAGCGGGT 62.719 66.667 5.60 0.00 43.02 5.28
2266 2362 1.607467 GTTGATGGGCTGGCTGGTT 60.607 57.895 0.00 0.00 0.00 3.67
2337 2439 1.301401 CCGACGCCAAGAACAAGGA 60.301 57.895 0.00 0.00 0.00 3.36
2380 2482 7.821846 GTCTATCAAAAGATCCACTTGAAGACT 59.178 37.037 20.13 7.16 38.98 3.24
2398 2500 2.496470 GACTAACCACCACTACTCCCTG 59.504 54.545 0.00 0.00 0.00 4.45
2411 2513 1.353694 ACTCCCTGTCAGGTACGTACT 59.646 52.381 24.07 8.57 31.93 2.73
2413 2515 2.941720 CTCCCTGTCAGGTACGTACTAC 59.058 54.545 24.07 18.84 31.93 2.73
2414 2516 2.305635 TCCCTGTCAGGTACGTACTACA 59.694 50.000 24.07 21.70 31.93 2.74
2417 2519 4.201990 CCCTGTCAGGTACGTACTACAATC 60.202 50.000 24.07 7.42 31.93 2.67
2419 2521 4.592942 TGTCAGGTACGTACTACAATCCT 58.407 43.478 24.07 9.11 0.00 3.24
2421 2523 5.477984 TGTCAGGTACGTACTACAATCCTTT 59.522 40.000 24.07 0.00 0.00 3.11
2422 2524 6.015180 TGTCAGGTACGTACTACAATCCTTTT 60.015 38.462 24.07 0.00 0.00 2.27
2423 2525 7.176515 TGTCAGGTACGTACTACAATCCTTTTA 59.823 37.037 24.07 0.00 0.00 1.52
2424 2526 8.193438 GTCAGGTACGTACTACAATCCTTTTAT 58.807 37.037 24.07 0.00 0.00 1.40
2425 2527 8.408601 TCAGGTACGTACTACAATCCTTTTATC 58.591 37.037 24.07 2.86 0.00 1.75
2426 2528 8.192774 CAGGTACGTACTACAATCCTTTTATCA 58.807 37.037 24.07 0.00 0.00 2.15
2427 2529 8.752187 AGGTACGTACTACAATCCTTTTATCAA 58.248 33.333 24.07 0.00 0.00 2.57
2428 2530 8.811378 GGTACGTACTACAATCCTTTTATCAAC 58.189 37.037 24.07 0.00 0.00 3.18
2429 2531 9.578439 GTACGTACTACAATCCTTTTATCAACT 57.422 33.333 18.47 0.00 0.00 3.16
2430 2532 8.475331 ACGTACTACAATCCTTTTATCAACTG 57.525 34.615 0.00 0.00 0.00 3.16
2431 2533 7.548075 ACGTACTACAATCCTTTTATCAACTGG 59.452 37.037 0.00 0.00 0.00 4.00
2469 2571 9.476928 AACAGAAAGTACTACTCCATACTGTAT 57.523 33.333 0.00 0.00 34.54 2.29
2513 2615 9.987272 CTGAATCTGAACTTGTGACCATATATA 57.013 33.333 0.00 0.00 0.00 0.86
3281 3490 2.901042 GGGCAGTTCTACGAGGGG 59.099 66.667 0.00 0.00 0.00 4.79
4020 4229 9.377312 CTTTAGAAGAATTGTTTAGAGGGAGAG 57.623 37.037 0.00 0.00 0.00 3.20
4058 4267 2.865670 GCTGCCCGTCTCTGATAAGATG 60.866 54.545 0.00 0.00 32.97 2.90
4061 4270 3.197766 TGCCCGTCTCTGATAAGATGTTT 59.802 43.478 0.00 0.00 31.52 2.83
4062 4271 3.557595 GCCCGTCTCTGATAAGATGTTTG 59.442 47.826 0.00 0.00 31.52 2.93
4063 4272 4.759782 CCCGTCTCTGATAAGATGTTTGT 58.240 43.478 0.00 0.00 31.52 2.83
4064 4273 4.568359 CCCGTCTCTGATAAGATGTTTGTG 59.432 45.833 0.00 0.00 31.52 3.33
4066 4275 5.062683 CCGTCTCTGATAAGATGTTTGTGTG 59.937 44.000 0.00 0.00 31.52 3.82
4080 4298 4.941263 TGTTTGTGTGTTCTTCTTGCTACT 59.059 37.500 0.00 0.00 0.00 2.57
4081 4299 5.064707 TGTTTGTGTGTTCTTCTTGCTACTC 59.935 40.000 0.00 0.00 0.00 2.59
4082 4300 4.672587 TGTGTGTTCTTCTTGCTACTCT 57.327 40.909 0.00 0.00 0.00 3.24
4083 4301 4.621991 TGTGTGTTCTTCTTGCTACTCTC 58.378 43.478 0.00 0.00 0.00 3.20
4084 4302 4.099419 TGTGTGTTCTTCTTGCTACTCTCA 59.901 41.667 0.00 0.00 0.00 3.27
4085 4303 4.683781 GTGTGTTCTTCTTGCTACTCTCAG 59.316 45.833 0.00 0.00 0.00 3.35
4086 4304 4.241681 GTGTTCTTCTTGCTACTCTCAGG 58.758 47.826 0.00 0.00 0.00 3.86
4087 4305 3.898123 TGTTCTTCTTGCTACTCTCAGGT 59.102 43.478 0.00 0.00 0.00 4.00
4104 4322 0.880278 GGTCTCAGCACGTCAAGCAA 60.880 55.000 0.00 0.00 0.00 3.91
4144 4367 7.789273 TTGTCACCGAGTTTTAGACAATTAA 57.211 32.000 0.00 0.00 42.35 1.40
4145 4368 7.972832 TGTCACCGAGTTTTAGACAATTAAT 57.027 32.000 0.00 0.00 36.39 1.40
4146 4369 7.802738 TGTCACCGAGTTTTAGACAATTAATG 58.197 34.615 0.00 0.00 36.39 1.90
4158 4381 4.882671 ACAATTAATGTCGCATCCTGTC 57.117 40.909 0.00 0.00 37.96 3.51
4159 4382 3.309682 ACAATTAATGTCGCATCCTGTCG 59.690 43.478 0.00 0.00 37.96 4.35
4160 4383 2.665649 TTAATGTCGCATCCTGTCGT 57.334 45.000 0.00 0.00 0.00 4.34
4165 4388 1.141665 TCGCATCCTGTCGTCATGG 59.858 57.895 0.00 0.00 0.00 3.66
4177 4400 2.476619 GTCGTCATGGATATTGAAGCGG 59.523 50.000 0.00 0.00 0.00 5.52
4183 4406 1.948834 TGGATATTGAAGCGGTGCATG 59.051 47.619 0.00 0.00 0.00 4.06
4197 4420 5.588648 AGCGGTGCATGTATACATAAAAACT 59.411 36.000 17.86 8.86 34.26 2.66
4198 4421 6.764085 AGCGGTGCATGTATACATAAAAACTA 59.236 34.615 17.86 0.00 34.26 2.24
4199 4422 6.849305 GCGGTGCATGTATACATAAAAACTAC 59.151 38.462 17.86 9.08 34.26 2.73
4201 4424 7.225931 CGGTGCATGTATACATAAAAACTACCT 59.774 37.037 17.86 0.00 34.26 3.08
4202 4425 8.342634 GGTGCATGTATACATAAAAACTACCTG 58.657 37.037 17.86 4.39 34.26 4.00
4203 4426 7.855904 GTGCATGTATACATAAAAACTACCTGC 59.144 37.037 17.86 13.92 35.69 4.85
4204 4427 7.773224 TGCATGTATACATAAAAACTACCTGCT 59.227 33.333 17.86 0.00 35.95 4.24
4205 4428 9.268268 GCATGTATACATAAAAACTACCTGCTA 57.732 33.333 17.86 0.00 33.74 3.49
4212 4435 8.943909 ACATAAAAACTACCTGCTATACACTC 57.056 34.615 0.00 0.00 0.00 3.51
4213 4436 7.985752 ACATAAAAACTACCTGCTATACACTCC 59.014 37.037 0.00 0.00 0.00 3.85
4214 4437 5.354842 AAAACTACCTGCTATACACTCCC 57.645 43.478 0.00 0.00 0.00 4.30
4215 4438 3.975479 ACTACCTGCTATACACTCCCT 57.025 47.619 0.00 0.00 0.00 4.20
4216 4439 3.834938 ACTACCTGCTATACACTCCCTC 58.165 50.000 0.00 0.00 0.00 4.30
4217 4440 2.089600 ACCTGCTATACACTCCCTCC 57.910 55.000 0.00 0.00 0.00 4.30
4218 4441 0.962489 CCTGCTATACACTCCCTCCG 59.038 60.000 0.00 0.00 0.00 4.63
4219 4442 1.693627 CTGCTATACACTCCCTCCGT 58.306 55.000 0.00 0.00 0.00 4.69
4220 4443 2.032620 CTGCTATACACTCCCTCCGTT 58.967 52.381 0.00 0.00 0.00 4.44
4221 4444 2.029623 TGCTATACACTCCCTCCGTTC 58.970 52.381 0.00 0.00 0.00 3.95
4222 4445 1.001597 GCTATACACTCCCTCCGTTCG 60.002 57.143 0.00 0.00 0.00 3.95
4223 4446 1.607628 CTATACACTCCCTCCGTTCGG 59.392 57.143 4.74 4.74 0.00 4.30
4224 4447 0.033796 ATACACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55
4225 4448 0.251297 TACACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
4226 4449 1.117142 ACACTCCCTCCGTTCGGAAA 61.117 55.000 14.79 3.49 33.41 3.13
4227 4450 0.249398 CACTCCCTCCGTTCGGAAAT 59.751 55.000 14.79 0.00 33.41 2.17
4228 4451 1.479323 CACTCCCTCCGTTCGGAAATA 59.521 52.381 14.79 2.82 33.41 1.40
4229 4452 2.093869 CACTCCCTCCGTTCGGAAATAA 60.094 50.000 14.79 1.25 33.41 1.40
4230 4453 2.093816 ACTCCCTCCGTTCGGAAATAAC 60.094 50.000 14.79 0.00 33.41 1.89
4231 4454 2.167900 CTCCCTCCGTTCGGAAATAACT 59.832 50.000 14.79 0.00 33.41 2.24
4232 4455 2.093869 TCCCTCCGTTCGGAAATAACTG 60.094 50.000 14.79 1.97 33.41 3.16
4233 4456 2.093869 CCCTCCGTTCGGAAATAACTGA 60.094 50.000 14.79 0.00 33.41 3.41
4234 4457 2.928116 CCTCCGTTCGGAAATAACTGAC 59.072 50.000 14.79 0.00 33.41 3.51
4235 4458 2.597305 CTCCGTTCGGAAATAACTGACG 59.403 50.000 14.79 0.00 33.41 4.35
4236 4459 1.657094 CCGTTCGGAAATAACTGACGG 59.343 52.381 5.19 0.00 35.46 4.79
4237 4460 1.657094 CGTTCGGAAATAACTGACGGG 59.343 52.381 0.00 0.00 0.00 5.28
4238 4461 2.691927 GTTCGGAAATAACTGACGGGT 58.308 47.619 0.00 0.00 0.00 5.28
4239 4462 3.069289 GTTCGGAAATAACTGACGGGTT 58.931 45.455 0.00 0.00 0.00 4.11
4240 4463 3.405823 TCGGAAATAACTGACGGGTTT 57.594 42.857 0.00 0.00 0.00 3.27
4241 4464 3.742385 TCGGAAATAACTGACGGGTTTT 58.258 40.909 0.00 0.00 0.00 2.43
4242 4465 4.892433 TCGGAAATAACTGACGGGTTTTA 58.108 39.130 0.00 0.00 0.00 1.52
4243 4466 4.931002 TCGGAAATAACTGACGGGTTTTAG 59.069 41.667 0.00 0.00 0.00 1.85
4244 4467 4.692155 CGGAAATAACTGACGGGTTTTAGT 59.308 41.667 0.00 0.00 0.00 2.24
4245 4468 5.179929 CGGAAATAACTGACGGGTTTTAGTT 59.820 40.000 0.00 0.00 37.21 2.24
4246 4469 6.376177 GGAAATAACTGACGGGTTTTAGTTG 58.624 40.000 0.00 0.00 35.26 3.16
4247 4470 6.205270 GGAAATAACTGACGGGTTTTAGTTGA 59.795 38.462 0.00 0.00 35.26 3.18
4248 4471 7.094506 GGAAATAACTGACGGGTTTTAGTTGAT 60.095 37.037 0.00 0.00 35.26 2.57
4249 4472 8.851541 AAATAACTGACGGGTTTTAGTTGATA 57.148 30.769 0.00 0.00 35.26 2.15
4250 4473 8.851541 AATAACTGACGGGTTTTAGTTGATAA 57.148 30.769 0.00 0.00 35.26 1.75
4251 4474 8.851541 ATAACTGACGGGTTTTAGTTGATAAA 57.148 30.769 0.00 0.00 35.26 1.40
4252 4475 7.571080 AACTGACGGGTTTTAGTTGATAAAA 57.429 32.000 0.00 0.00 40.30 1.52
4262 4485 7.556733 TTTTAGTTGATAAAACCACGTCAGT 57.443 32.000 0.00 0.00 38.22 3.41
4263 4486 7.556733 TTTAGTTGATAAAACCACGTCAGTT 57.443 32.000 0.00 0.00 30.28 3.16
4264 4487 8.659925 TTTAGTTGATAAAACCACGTCAGTTA 57.340 30.769 1.13 0.00 30.28 2.24
4265 4488 8.836268 TTAGTTGATAAAACCACGTCAGTTAT 57.164 30.769 1.13 0.00 0.00 1.89
4266 4489 7.739498 AGTTGATAAAACCACGTCAGTTATT 57.261 32.000 1.13 2.27 0.00 1.40
4267 4490 8.161699 AGTTGATAAAACCACGTCAGTTATTT 57.838 30.769 1.13 0.00 0.00 1.40
4268 4491 8.287503 AGTTGATAAAACCACGTCAGTTATTTC 58.712 33.333 1.13 0.79 0.00 2.17
4269 4492 6.823531 TGATAAAACCACGTCAGTTATTTCG 58.176 36.000 1.13 0.00 0.00 3.46
4270 4493 6.645827 TGATAAAACCACGTCAGTTATTTCGA 59.354 34.615 1.13 0.00 0.00 3.71
4271 4494 5.738118 AAAACCACGTCAGTTATTTCGAA 57.262 34.783 0.00 0.00 0.00 3.71
4272 4495 5.738118 AAACCACGTCAGTTATTTCGAAA 57.262 34.783 13.91 13.91 0.00 3.46
4273 4496 4.720530 ACCACGTCAGTTATTTCGAAAC 57.279 40.909 13.81 0.94 0.00 2.78
4274 4497 3.182972 ACCACGTCAGTTATTTCGAAACG 59.817 43.478 13.81 13.40 35.00 3.60
4275 4498 3.422603 CCACGTCAGTTATTTCGAAACGG 60.423 47.826 13.81 2.36 33.26 4.44
4276 4499 3.426191 CACGTCAGTTATTTCGAAACGGA 59.574 43.478 13.81 4.95 33.26 4.69
4277 4500 3.671928 ACGTCAGTTATTTCGAAACGGAG 59.328 43.478 13.81 2.96 32.84 4.63
4278 4501 3.060363 CGTCAGTTATTTCGAAACGGAGG 59.940 47.826 13.81 9.47 32.84 4.30
4279 4502 3.992427 GTCAGTTATTTCGAAACGGAGGT 59.008 43.478 13.81 0.00 32.84 3.85
4280 4503 5.163513 GTCAGTTATTTCGAAACGGAGGTA 58.836 41.667 13.81 0.00 32.84 3.08
4281 4504 5.287992 GTCAGTTATTTCGAAACGGAGGTAG 59.712 44.000 13.81 0.00 32.84 3.18
4282 4505 5.047802 TCAGTTATTTCGAAACGGAGGTAGT 60.048 40.000 13.81 0.00 32.00 2.73
4283 4506 6.150976 TCAGTTATTTCGAAACGGAGGTAGTA 59.849 38.462 13.81 0.00 32.00 1.82
4284 4507 6.808212 CAGTTATTTCGAAACGGAGGTAGTAA 59.192 38.462 13.81 1.84 32.00 2.24
4285 4508 7.490402 CAGTTATTTCGAAACGGAGGTAGTAAT 59.510 37.037 13.81 0.00 32.00 1.89
4286 4509 8.686334 AGTTATTTCGAAACGGAGGTAGTAATA 58.314 33.333 13.81 0.00 32.00 0.98
4287 4510 9.468532 GTTATTTCGAAACGGAGGTAGTAATAT 57.531 33.333 13.81 0.00 0.00 1.28
4290 4513 9.688592 ATTTCGAAACGGAGGTAGTAATATTAG 57.311 33.333 13.81 0.00 0.00 1.73
4291 4514 8.450578 TTCGAAACGGAGGTAGTAATATTAGA 57.549 34.615 0.00 0.00 0.00 2.10
4292 4515 8.450578 TCGAAACGGAGGTAGTAATATTAGAA 57.549 34.615 0.00 0.00 0.00 2.10
4293 4516 8.902806 TCGAAACGGAGGTAGTAATATTAGAAA 58.097 33.333 0.00 0.00 0.00 2.52
4294 4517 9.688592 CGAAACGGAGGTAGTAATATTAGAAAT 57.311 33.333 0.00 0.00 0.00 2.17
4315 4538 9.646522 AGAAATACAATATGGCAGGTTAATCTT 57.353 29.630 0.00 0.00 0.00 2.40
4321 4544 9.289782 ACAATATGGCAGGTTAATCTTTATCTC 57.710 33.333 0.00 0.00 0.00 2.75
4322 4545 8.734386 CAATATGGCAGGTTAATCTTTATCTCC 58.266 37.037 0.00 0.00 0.00 3.71
4323 4546 5.708736 TGGCAGGTTAATCTTTATCTCCA 57.291 39.130 0.00 0.00 0.00 3.86
4324 4547 5.437060 TGGCAGGTTAATCTTTATCTCCAC 58.563 41.667 0.00 0.00 0.00 4.02
4325 4548 4.822350 GGCAGGTTAATCTTTATCTCCACC 59.178 45.833 0.00 0.00 0.00 4.61
4326 4549 5.437060 GCAGGTTAATCTTTATCTCCACCA 58.563 41.667 0.00 0.00 0.00 4.17
4327 4550 5.529060 GCAGGTTAATCTTTATCTCCACCAG 59.471 44.000 0.00 0.00 0.00 4.00
4328 4551 6.653989 CAGGTTAATCTTTATCTCCACCAGT 58.346 40.000 0.00 0.00 0.00 4.00
4329 4552 7.635089 GCAGGTTAATCTTTATCTCCACCAGTA 60.635 40.741 0.00 0.00 0.00 2.74
4330 4553 8.432805 CAGGTTAATCTTTATCTCCACCAGTAT 58.567 37.037 0.00 0.00 0.00 2.12
4331 4554 9.004231 AGGTTAATCTTTATCTCCACCAGTATT 57.996 33.333 0.00 0.00 0.00 1.89
4332 4555 9.628500 GGTTAATCTTTATCTCCACCAGTATTT 57.372 33.333 0.00 0.00 0.00 1.40
4337 4560 8.732746 TCTTTATCTCCACCAGTATTTAAAGC 57.267 34.615 0.00 0.00 0.00 3.51
4338 4561 8.325787 TCTTTATCTCCACCAGTATTTAAAGCA 58.674 33.333 0.00 0.00 0.00 3.91
4339 4562 9.125026 CTTTATCTCCACCAGTATTTAAAGCAT 57.875 33.333 0.00 0.00 0.00 3.79
4340 4563 9.474313 TTTATCTCCACCAGTATTTAAAGCATT 57.526 29.630 0.00 0.00 0.00 3.56
4342 4565 8.682936 ATCTCCACCAGTATTTAAAGCATTAG 57.317 34.615 0.00 0.00 0.00 1.73
4343 4566 7.630082 TCTCCACCAGTATTTAAAGCATTAGT 58.370 34.615 0.00 0.00 0.00 2.24
4344 4567 8.107095 TCTCCACCAGTATTTAAAGCATTAGTT 58.893 33.333 0.00 0.00 0.00 2.24
4345 4568 8.276252 TCCACCAGTATTTAAAGCATTAGTTC 57.724 34.615 0.00 0.00 0.00 3.01
4346 4569 8.107095 TCCACCAGTATTTAAAGCATTAGTTCT 58.893 33.333 0.00 0.00 0.00 3.01
4347 4570 9.391006 CCACCAGTATTTAAAGCATTAGTTCTA 57.609 33.333 0.00 0.00 0.00 2.10
4349 4572 9.953565 ACCAGTATTTAAAGCATTAGTTCTACA 57.046 29.630 0.00 0.00 0.00 2.74
4358 4581 8.451908 AAAGCATTAGTTCTACATATCCCAAC 57.548 34.615 0.00 0.00 0.00 3.77
4359 4582 7.136822 AGCATTAGTTCTACATATCCCAACA 57.863 36.000 0.00 0.00 0.00 3.33
4360 4583 7.573710 AGCATTAGTTCTACATATCCCAACAA 58.426 34.615 0.00 0.00 0.00 2.83
4361 4584 8.220559 AGCATTAGTTCTACATATCCCAACAAT 58.779 33.333 0.00 0.00 0.00 2.71
4362 4585 8.507249 GCATTAGTTCTACATATCCCAACAATC 58.493 37.037 0.00 0.00 0.00 2.67
4363 4586 9.559732 CATTAGTTCTACATATCCCAACAATCA 57.440 33.333 0.00 0.00 0.00 2.57
4364 4587 8.958119 TTAGTTCTACATATCCCAACAATCAC 57.042 34.615 0.00 0.00 0.00 3.06
4365 4588 6.957631 AGTTCTACATATCCCAACAATCACA 58.042 36.000 0.00 0.00 0.00 3.58
4366 4589 7.402054 AGTTCTACATATCCCAACAATCACAA 58.598 34.615 0.00 0.00 0.00 3.33
4367 4590 7.888021 AGTTCTACATATCCCAACAATCACAAA 59.112 33.333 0.00 0.00 0.00 2.83
4368 4591 7.864108 TCTACATATCCCAACAATCACAAAG 57.136 36.000 0.00 0.00 0.00 2.77
4369 4592 7.629157 TCTACATATCCCAACAATCACAAAGA 58.371 34.615 0.00 0.00 0.00 2.52
4370 4593 8.274322 TCTACATATCCCAACAATCACAAAGAT 58.726 33.333 0.00 0.00 39.09 2.40
4371 4594 7.338800 ACATATCCCAACAATCACAAAGATC 57.661 36.000 0.00 0.00 35.39 2.75
4372 4595 7.121382 ACATATCCCAACAATCACAAAGATCT 58.879 34.615 0.00 0.00 35.39 2.75
4373 4596 8.274322 ACATATCCCAACAATCACAAAGATCTA 58.726 33.333 0.00 0.00 35.39 1.98
4374 4597 8.562892 CATATCCCAACAATCACAAAGATCTAC 58.437 37.037 0.00 0.00 35.39 2.59
4375 4598 5.875224 TCCCAACAATCACAAAGATCTACA 58.125 37.500 0.00 0.00 35.39 2.74
4376 4599 5.705441 TCCCAACAATCACAAAGATCTACAC 59.295 40.000 0.00 0.00 35.39 2.90
4377 4600 5.390885 CCCAACAATCACAAAGATCTACACG 60.391 44.000 0.00 0.00 35.39 4.49
4378 4601 5.179368 CCAACAATCACAAAGATCTACACGT 59.821 40.000 0.00 0.00 35.39 4.49
4379 4602 6.299604 CAACAATCACAAAGATCTACACGTC 58.700 40.000 0.00 0.00 35.39 4.34
4380 4603 5.784177 ACAATCACAAAGATCTACACGTCT 58.216 37.500 0.00 0.00 35.39 4.18
4381 4604 5.864474 ACAATCACAAAGATCTACACGTCTC 59.136 40.000 0.00 0.00 35.39 3.36
4382 4605 5.644977 ATCACAAAGATCTACACGTCTCA 57.355 39.130 0.00 0.00 28.20 3.27
4383 4606 5.447624 TCACAAAGATCTACACGTCTCAA 57.552 39.130 0.00 0.00 0.00 3.02
4384 4607 5.838529 TCACAAAGATCTACACGTCTCAAA 58.161 37.500 0.00 0.00 0.00 2.69
4385 4608 6.455647 TCACAAAGATCTACACGTCTCAAAT 58.544 36.000 0.00 0.00 0.00 2.32
4386 4609 6.586463 TCACAAAGATCTACACGTCTCAAATC 59.414 38.462 0.00 0.00 0.00 2.17
4387 4610 6.587990 CACAAAGATCTACACGTCTCAAATCT 59.412 38.462 0.00 0.00 0.00 2.40
4388 4611 7.755373 CACAAAGATCTACACGTCTCAAATCTA 59.245 37.037 0.00 0.00 0.00 1.98
4389 4612 8.304596 ACAAAGATCTACACGTCTCAAATCTAA 58.695 33.333 0.00 0.00 0.00 2.10
4390 4613 9.307121 CAAAGATCTACACGTCTCAAATCTAAT 57.693 33.333 0.00 0.00 0.00 1.73
4392 4615 9.953697 AAGATCTACACGTCTCAAATCTAATAC 57.046 33.333 0.00 0.00 0.00 1.89
4393 4616 9.121658 AGATCTACACGTCTCAAATCTAATACA 57.878 33.333 0.00 0.00 0.00 2.29
4394 4617 9.171701 GATCTACACGTCTCAAATCTAATACAC 57.828 37.037 0.00 0.00 0.00 2.90
4395 4618 8.047413 TCTACACGTCTCAAATCTAATACACA 57.953 34.615 0.00 0.00 0.00 3.72
4396 4619 6.946229 ACACGTCTCAAATCTAATACACAC 57.054 37.500 0.00 0.00 0.00 3.82
4397 4620 6.452242 ACACGTCTCAAATCTAATACACACA 58.548 36.000 0.00 0.00 0.00 3.72
4398 4621 7.097192 ACACGTCTCAAATCTAATACACACAT 58.903 34.615 0.00 0.00 0.00 3.21
4399 4622 7.275779 ACACGTCTCAAATCTAATACACACATC 59.724 37.037 0.00 0.00 0.00 3.06
4400 4623 6.472486 ACGTCTCAAATCTAATACACACATCG 59.528 38.462 0.00 0.00 0.00 3.84
4401 4624 6.472486 CGTCTCAAATCTAATACACACATCGT 59.528 38.462 0.00 0.00 0.00 3.73
4402 4625 7.305475 CGTCTCAAATCTAATACACACATCGTC 60.305 40.741 0.00 0.00 0.00 4.20
4403 4626 6.978659 TCTCAAATCTAATACACACATCGTCC 59.021 38.462 0.00 0.00 0.00 4.79
4404 4627 6.046593 TCAAATCTAATACACACATCGTCCC 58.953 40.000 0.00 0.00 0.00 4.46
4405 4628 5.607939 AATCTAATACACACATCGTCCCA 57.392 39.130 0.00 0.00 0.00 4.37
4406 4629 5.607939 ATCTAATACACACATCGTCCCAA 57.392 39.130 0.00 0.00 0.00 4.12
4407 4630 5.607939 TCTAATACACACATCGTCCCAAT 57.392 39.130 0.00 0.00 0.00 3.16
4408 4631 5.356426 TCTAATACACACATCGTCCCAATG 58.644 41.667 0.00 0.00 0.00 2.82
4409 4632 1.732941 TACACACATCGTCCCAATGC 58.267 50.000 0.00 0.00 0.00 3.56
4410 4633 0.960364 ACACACATCGTCCCAATGCC 60.960 55.000 0.00 0.00 0.00 4.40
4411 4634 1.378514 ACACATCGTCCCAATGCCC 60.379 57.895 0.00 0.00 0.00 5.36
4412 4635 2.120909 CACATCGTCCCAATGCCCC 61.121 63.158 0.00 0.00 0.00 5.80
4413 4636 2.519302 CATCGTCCCAATGCCCCC 60.519 66.667 0.00 0.00 0.00 5.40
4414 4637 2.696125 ATCGTCCCAATGCCCCCT 60.696 61.111 0.00 0.00 0.00 4.79
4415 4638 3.060614 ATCGTCCCAATGCCCCCTG 62.061 63.158 0.00 0.00 0.00 4.45
4416 4639 4.047125 CGTCCCAATGCCCCCTGT 62.047 66.667 0.00 0.00 0.00 4.00
4417 4640 2.043953 GTCCCAATGCCCCCTGTC 60.044 66.667 0.00 0.00 0.00 3.51
4418 4641 2.204291 TCCCAATGCCCCCTGTCT 60.204 61.111 0.00 0.00 0.00 3.41
4419 4642 1.856873 TCCCAATGCCCCCTGTCTT 60.857 57.895 0.00 0.00 0.00 3.01
4420 4643 1.079073 CCCAATGCCCCCTGTCTTT 59.921 57.895 0.00 0.00 0.00 2.52
4421 4644 1.259840 CCCAATGCCCCCTGTCTTTG 61.260 60.000 0.00 0.00 0.00 2.77
4422 4645 1.259840 CCAATGCCCCCTGTCTTTGG 61.260 60.000 0.00 0.00 33.25 3.28
4423 4646 0.251742 CAATGCCCCCTGTCTTTGGA 60.252 55.000 0.00 0.00 0.00 3.53
4424 4647 0.486879 AATGCCCCCTGTCTTTGGAA 59.513 50.000 0.00 0.00 0.00 3.53
4425 4648 0.486879 ATGCCCCCTGTCTTTGGAAA 59.513 50.000 0.00 0.00 0.00 3.13
4426 4649 0.263172 TGCCCCCTGTCTTTGGAAAA 59.737 50.000 0.00 0.00 0.00 2.29
4427 4650 0.679505 GCCCCCTGTCTTTGGAAAAC 59.320 55.000 0.00 0.00 0.00 2.43
4428 4651 2.032151 GCCCCCTGTCTTTGGAAAACA 61.032 52.381 0.00 0.00 0.00 2.83
4429 4652 2.393646 CCCCCTGTCTTTGGAAAACAA 58.606 47.619 0.00 0.00 37.28 2.83
4430 4653 2.769095 CCCCCTGTCTTTGGAAAACAAA 59.231 45.455 0.00 0.00 46.34 2.83
4436 4659 5.351189 CCTGTCTTTGGAAAACAAAAACTGG 59.649 40.000 7.49 7.49 46.04 4.00
4437 4660 8.048315 CCTGTCTTTGGAAAACAAAAACTGGC 62.048 42.308 8.55 0.00 45.73 4.85
4440 4663 5.619625 TTTGGAAAACAAAAACTGGCTTG 57.380 34.783 0.00 0.00 45.59 4.01
4441 4664 3.006247 TGGAAAACAAAAACTGGCTTGC 58.994 40.909 0.00 0.00 0.00 4.01
4442 4665 3.270027 GGAAAACAAAAACTGGCTTGCT 58.730 40.909 0.00 0.00 0.00 3.91
4443 4666 3.689161 GGAAAACAAAAACTGGCTTGCTT 59.311 39.130 0.00 0.00 0.00 3.91
4444 4667 4.155826 GGAAAACAAAAACTGGCTTGCTTT 59.844 37.500 0.00 0.00 0.00 3.51
4841 5064 4.789075 GCCGCGCGTGTAGAGGAA 62.789 66.667 29.95 0.00 0.00 3.36
4842 5065 2.126228 CCGCGCGTGTAGAGGAAA 60.126 61.111 29.95 0.00 0.00 3.13
4843 5066 1.735198 CCGCGCGTGTAGAGGAAAA 60.735 57.895 29.95 0.00 0.00 2.29
4844 5067 1.286354 CCGCGCGTGTAGAGGAAAAA 61.286 55.000 29.95 0.00 0.00 1.94
4874 5097 4.951963 CGATCTTCTCGCCCGCCC 62.952 72.222 0.00 0.00 41.14 6.13
4875 5098 4.951963 GATCTTCTCGCCCGCCCG 62.952 72.222 0.00 0.00 0.00 6.13
4889 5112 4.771356 CCCGACGATCACGCACGT 62.771 66.667 0.00 0.00 45.32 4.49
4890 5113 2.803670 CCGACGATCACGCACGTT 60.804 61.111 0.00 0.00 42.74 3.99
4891 5114 2.386491 CGACGATCACGCACGTTG 59.614 61.111 0.00 0.00 42.74 4.10
4892 5115 2.078341 CGACGATCACGCACGTTGA 61.078 57.895 0.00 0.00 43.78 3.18
4893 5116 1.403225 CGACGATCACGCACGTTGAT 61.403 55.000 0.86 0.86 43.78 2.57
4894 5117 0.294887 GACGATCACGCACGTTGATC 59.705 55.000 15.66 15.66 42.74 2.92
4895 5118 0.388006 ACGATCACGCACGTTGATCA 60.388 50.000 22.21 0.00 43.96 2.92
4896 5119 0.023732 CGATCACGCACGTTGATCAC 59.976 55.000 22.21 4.19 38.57 3.06
4907 5130 3.117434 CGTTGATCACGTCCATTTTCC 57.883 47.619 0.00 0.00 44.49 3.13
4908 5131 2.482336 CGTTGATCACGTCCATTTTCCA 59.518 45.455 0.00 0.00 44.49 3.53
4909 5132 3.058570 CGTTGATCACGTCCATTTTCCAA 60.059 43.478 0.00 0.00 44.49 3.53
4910 5133 4.226761 GTTGATCACGTCCATTTTCCAAC 58.773 43.478 0.00 0.00 0.00 3.77
4911 5134 3.750371 TGATCACGTCCATTTTCCAACT 58.250 40.909 0.00 0.00 0.00 3.16
4912 5135 3.501828 TGATCACGTCCATTTTCCAACTG 59.498 43.478 0.00 0.00 0.00 3.16
4913 5136 2.925724 TCACGTCCATTTTCCAACTGT 58.074 42.857 0.00 0.00 0.00 3.55
4914 5137 2.616376 TCACGTCCATTTTCCAACTGTG 59.384 45.455 0.00 0.00 0.00 3.66
4915 5138 1.336755 ACGTCCATTTTCCAACTGTGC 59.663 47.619 0.00 0.00 0.00 4.57
4916 5139 1.662876 CGTCCATTTTCCAACTGTGCG 60.663 52.381 0.00 0.00 0.00 5.34
4917 5140 1.606668 GTCCATTTTCCAACTGTGCGA 59.393 47.619 0.00 0.00 0.00 5.10
4918 5141 2.228822 GTCCATTTTCCAACTGTGCGAT 59.771 45.455 0.00 0.00 0.00 4.58
4919 5142 2.487762 TCCATTTTCCAACTGTGCGATC 59.512 45.455 0.00 0.00 0.00 3.69
4920 5143 2.508867 CATTTTCCAACTGTGCGATCG 58.491 47.619 11.69 11.69 0.00 3.69
4921 5144 0.237235 TTTTCCAACTGTGCGATCGC 59.763 50.000 32.48 32.48 42.35 4.58
4922 5145 0.602638 TTTCCAACTGTGCGATCGCT 60.603 50.000 37.01 17.50 42.51 4.93
4923 5146 1.291184 TTCCAACTGTGCGATCGCTG 61.291 55.000 37.01 26.47 42.51 5.18
4924 5147 2.097160 CAACTGTGCGATCGCTGC 59.903 61.111 37.01 28.77 42.51 5.25
4925 5148 3.121030 AACTGTGCGATCGCTGCC 61.121 61.111 37.01 25.14 42.51 4.85
4935 5158 4.373116 TCGCTGCCGACTGAACCC 62.373 66.667 0.00 0.00 38.82 4.11
4937 5160 4.329545 GCTGCCGACTGAACCCCA 62.330 66.667 0.00 0.00 0.00 4.96
4938 5161 2.671070 CTGCCGACTGAACCCCAT 59.329 61.111 0.00 0.00 0.00 4.00
4939 5162 1.450312 CTGCCGACTGAACCCCATC 60.450 63.158 0.00 0.00 0.00 3.51
4940 5163 2.124695 GCCGACTGAACCCCATCC 60.125 66.667 0.00 0.00 0.00 3.51
4941 5164 2.186903 CCGACTGAACCCCATCCG 59.813 66.667 0.00 0.00 0.00 4.18
4942 5165 2.355986 CCGACTGAACCCCATCCGA 61.356 63.158 0.00 0.00 0.00 4.55
4943 5166 1.153628 CGACTGAACCCCATCCGAC 60.154 63.158 0.00 0.00 0.00 4.79
4944 5167 1.153628 GACTGAACCCCATCCGACG 60.154 63.158 0.00 0.00 0.00 5.12
4945 5168 2.511600 CTGAACCCCATCCGACGC 60.512 66.667 0.00 0.00 0.00 5.19
4946 5169 4.090588 TGAACCCCATCCGACGCC 62.091 66.667 0.00 0.00 0.00 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 0.538118 TACCCGCAGTAACCATGTCC 59.462 55.000 0.00 0.00 0.00 4.02
44 45 6.200475 GGTATCTGCTCAGTAATTTTCGGTAC 59.800 42.308 0.00 0.00 0.00 3.34
49 50 6.312918 TGAACGGTATCTGCTCAGTAATTTTC 59.687 38.462 0.00 0.00 0.00 2.29
58 59 4.385825 AGTTTTTGAACGGTATCTGCTCA 58.614 39.130 0.00 0.00 0.00 4.26
61 62 7.917720 TTTAAAGTTTTTGAACGGTATCTGC 57.082 32.000 0.00 0.00 0.00 4.26
138 144 3.203716 GACAATAGTTCCCGGTCAATCC 58.796 50.000 0.00 0.00 0.00 3.01
143 149 2.165030 TCTTCGACAATAGTTCCCGGTC 59.835 50.000 0.00 0.00 0.00 4.79
145 151 2.953466 TCTTCGACAATAGTTCCCGG 57.047 50.000 0.00 0.00 0.00 5.73
152 158 6.920758 CCTCCTCACTAAATCTTCGACAATAG 59.079 42.308 0.00 0.00 0.00 1.73
155 161 4.081642 CCCTCCTCACTAAATCTTCGACAA 60.082 45.833 0.00 0.00 0.00 3.18
159 165 2.483889 GCCCCTCCTCACTAAATCTTCG 60.484 54.545 0.00 0.00 0.00 3.79
164 170 3.983410 ACATATGCCCCTCCTCACTAAAT 59.017 43.478 1.58 0.00 0.00 1.40
209 215 2.845967 GCGGAAATTCTTGCATAACACG 59.154 45.455 6.02 0.00 0.00 4.49
231 237 4.340381 CCGGTGCAGGTATAGTTAACTAGT 59.660 45.833 19.58 10.91 0.00 2.57
291 304 3.492011 CCCATTAGAAATGTACGTACCGC 59.508 47.826 22.43 9.27 0.00 5.68
308 321 1.670811 CGCGTTTCTTGCTATCCCATT 59.329 47.619 0.00 0.00 0.00 3.16
309 322 1.299541 CGCGTTTCTTGCTATCCCAT 58.700 50.000 0.00 0.00 0.00 4.00
336 350 2.415491 GCCTGAGAAATTTGGTAACCGC 60.415 50.000 0.00 0.00 0.00 5.68
345 359 5.622233 GCTTTGATTACCGCCTGAGAAATTT 60.622 40.000 0.00 0.00 0.00 1.82
371 385 0.592754 GTCGTGGCTAGCTCGATCAC 60.593 60.000 27.31 19.62 36.08 3.06
387 401 5.179368 TCTCTTTGCTAGTTTTGAATGGTCG 59.821 40.000 0.00 0.00 0.00 4.79
389 403 8.635765 TTATCTCTTTGCTAGTTTTGAATGGT 57.364 30.769 0.00 0.00 0.00 3.55
649 664 7.147976 AGAATTCCAAATCTTTTGCTACACAC 58.852 34.615 0.65 0.00 0.00 3.82
653 668 7.513132 GCAAAGAATTCCAAATCTTTTGCTAC 58.487 34.615 22.10 4.29 41.79 3.58
665 680 2.099405 GATCCCCGCAAAGAATTCCAA 58.901 47.619 0.65 0.00 0.00 3.53
726 741 2.963101 GCCTTGTTAATTACCCCATCCC 59.037 50.000 0.00 0.00 0.00 3.85
727 742 2.963101 GGCCTTGTTAATTACCCCATCC 59.037 50.000 0.00 0.00 0.00 3.51
728 743 3.637769 TGGCCTTGTTAATTACCCCATC 58.362 45.455 3.32 0.00 0.00 3.51
729 744 3.767309 TGGCCTTGTTAATTACCCCAT 57.233 42.857 3.32 0.00 0.00 4.00
730 745 3.767309 ATGGCCTTGTTAATTACCCCA 57.233 42.857 3.32 0.00 0.00 4.96
771 790 2.096980 CAGCAGTGCATTATGTGTGGAG 59.903 50.000 19.20 0.00 0.00 3.86
867 890 5.461526 GCAAAGGGTAACTGATTTGTTCTC 58.538 41.667 0.00 0.00 37.06 2.87
937 962 5.215252 TGTTCCTTCTTCTACTGAACTGG 57.785 43.478 0.00 0.00 36.98 4.00
938 963 6.528423 CGTATGTTCCTTCTTCTACTGAACTG 59.472 42.308 0.00 0.00 36.98 3.16
1072 1097 4.941263 CCGGAATTACAAACTGGAATGAGA 59.059 41.667 0.00 0.00 29.78 3.27
1074 1099 4.658063 ACCGGAATTACAAACTGGAATGA 58.342 39.130 9.46 0.00 29.78 2.57
1089 1116 0.981943 AACCTTCTCGGAACCGGAAT 59.018 50.000 9.46 0.00 40.25 3.01
1095 1122 1.610886 CCCCAAGAACCTTCTCGGAAC 60.611 57.143 0.00 0.00 33.05 3.62
1125 1152 5.512942 TGGGAAAACAGATTACAGATCCA 57.487 39.130 0.00 0.00 0.00 3.41
1330 1369 7.820648 TCACCTTTCTCAGCTGATTAATTTTC 58.179 34.615 18.63 0.00 0.00 2.29
1336 1375 6.475504 TGAAATCACCTTTCTCAGCTGATTA 58.524 36.000 18.63 5.78 43.14 1.75
1386 1439 5.852282 AGGCAACATGTCAGTTTAAAAGT 57.148 34.783 0.00 0.00 41.41 2.66
1387 1440 7.199766 TGTAAGGCAACATGTCAGTTTAAAAG 58.800 34.615 0.00 0.00 41.41 2.27
1393 1446 4.085357 TCTGTAAGGCAACATGTCAGTT 57.915 40.909 0.00 0.00 41.41 3.16
1395 1448 6.932356 ATATTCTGTAAGGCAACATGTCAG 57.068 37.500 0.00 0.00 41.41 3.51
1396 1449 6.765989 GGTATATTCTGTAAGGCAACATGTCA 59.234 38.462 0.00 0.00 41.41 3.58
1398 1451 6.658849 TGGTATATTCTGTAAGGCAACATGT 58.341 36.000 0.00 0.00 41.41 3.21
1399 1452 7.566760 TTGGTATATTCTGTAAGGCAACATG 57.433 36.000 0.00 0.00 41.41 3.21
1401 1454 5.588648 GCTTGGTATATTCTGTAAGGCAACA 59.411 40.000 0.00 0.00 41.41 3.33
1402 1455 5.823045 AGCTTGGTATATTCTGTAAGGCAAC 59.177 40.000 0.00 0.00 0.00 4.17
1424 1510 4.215613 AGGTAAAAAGGACACATTTCGAGC 59.784 41.667 0.00 0.00 0.00 5.03
1469 1555 1.393539 CCGTCACCGTGTCAATCAATC 59.606 52.381 0.00 0.00 0.00 2.67
1480 1566 2.563702 ACAAATGTTTACCGTCACCGT 58.436 42.857 0.00 0.00 0.00 4.83
1500 1586 5.593095 ACGATGTACTTCCATGCTACTAGAA 59.407 40.000 0.00 0.00 0.00 2.10
1501 1587 5.008712 CACGATGTACTTCCATGCTACTAGA 59.991 44.000 0.00 0.00 0.00 2.43
1502 1588 5.215903 CACGATGTACTTCCATGCTACTAG 58.784 45.833 3.35 0.00 0.00 2.57
1573 1659 6.153000 AGGTTGAACTACACTCCAGTACATAG 59.847 42.308 0.00 0.00 0.00 2.23
1633 1719 5.631119 AGCTGGTATGGTGTTTTCTTAGTT 58.369 37.500 0.00 0.00 0.00 2.24
1634 1720 5.013183 AGAGCTGGTATGGTGTTTTCTTAGT 59.987 40.000 0.00 0.00 0.00 2.24
1635 1721 5.491982 AGAGCTGGTATGGTGTTTTCTTAG 58.508 41.667 0.00 0.00 0.00 2.18
1636 1722 5.499004 AGAGCTGGTATGGTGTTTTCTTA 57.501 39.130 0.00 0.00 0.00 2.10
1870 1960 0.971386 AAGCACAGCAATTTCCTGGG 59.029 50.000 7.56 4.71 36.80 4.45
1872 1962 1.269883 TGCAAGCACAGCAATTTCCTG 60.270 47.619 0.00 2.16 39.39 3.86
1937 2027 8.405531 GCTTTAGACATATGCTAAATCCAACAA 58.594 33.333 21.83 7.54 37.25 2.83
1942 2032 7.751768 AAGGCTTTAGACATATGCTAAATCC 57.248 36.000 25.54 25.54 41.22 3.01
1969 2059 6.539649 TGGAAATCAGTAGTTTCAGTTTCG 57.460 37.500 0.00 0.00 37.32 3.46
2037 2127 7.362401 CCTTTCAAGATCTTGTAGGGAATGTTG 60.362 40.741 30.94 15.91 38.68 3.33
2038 2128 6.660949 CCTTTCAAGATCTTGTAGGGAATGTT 59.339 38.462 30.94 1.35 38.68 2.71
2042 2132 6.448369 TTCCTTTCAAGATCTTGTAGGGAA 57.552 37.500 34.92 34.92 46.08 3.97
2043 2133 6.448369 TTTCCTTTCAAGATCTTGTAGGGA 57.552 37.500 33.94 32.26 41.72 4.20
2044 2134 8.049721 AGTATTTCCTTTCAAGATCTTGTAGGG 58.950 37.037 33.94 31.13 40.45 3.53
2054 2150 6.071391 GGGCAATTCAGTATTTCCTTTCAAGA 60.071 38.462 0.00 0.00 31.06 3.02
2105 2201 4.486839 TCCTGATCCTGATTCTGATGCTA 58.513 43.478 0.00 0.00 0.00 3.49
2106 2202 3.315596 TCCTGATCCTGATTCTGATGCT 58.684 45.455 0.00 0.00 0.00 3.79
2107 2203 3.766068 TCCTGATCCTGATTCTGATGC 57.234 47.619 0.00 0.00 0.00 3.91
2108 2204 8.101419 TGATTAATCCTGATCCTGATTCTGATG 58.899 37.037 12.90 0.00 33.46 3.07
2109 2205 8.102047 GTGATTAATCCTGATCCTGATTCTGAT 58.898 37.037 12.90 4.65 33.46 2.90
2111 2207 7.222161 TGTGATTAATCCTGATCCTGATTCTG 58.778 38.462 12.90 0.00 33.46 3.02
2112 2208 7.384524 TGTGATTAATCCTGATCCTGATTCT 57.615 36.000 12.90 1.34 33.46 2.40
2113 2209 7.881751 TCATGTGATTAATCCTGATCCTGATTC 59.118 37.037 12.90 0.00 33.46 2.52
2114 2210 7.752638 TCATGTGATTAATCCTGATCCTGATT 58.247 34.615 12.90 10.56 35.48 2.57
2115 2211 7.325725 TCATGTGATTAATCCTGATCCTGAT 57.674 36.000 12.90 0.00 0.00 2.90
2118 2214 7.325725 TCATCATGTGATTAATCCTGATCCT 57.674 36.000 12.90 0.00 31.21 3.24
2138 2234 6.002704 AGGCACAAGATTAATCCTGATCATC 58.997 40.000 18.82 5.66 0.00 2.92
2140 2236 5.128205 CAGGCACAAGATTAATCCTGATCA 58.872 41.667 18.82 0.00 42.64 2.92
2144 2240 5.416952 AGAAACAGGCACAAGATTAATCCTG 59.583 40.000 11.92 11.82 44.80 3.86
2249 2345 1.304381 GAACCAGCCAGCCCATCAA 60.304 57.895 0.00 0.00 0.00 2.57
2362 2464 5.998363 GTGGTTAGTCTTCAAGTGGATCTTT 59.002 40.000 0.00 0.00 33.63 2.52
2380 2482 2.158279 TGACAGGGAGTAGTGGTGGTTA 60.158 50.000 0.00 0.00 0.00 2.85
2398 2500 5.573337 AAGGATTGTAGTACGTACCTGAC 57.427 43.478 21.80 16.94 0.00 3.51
2411 2513 9.967451 TGATAACCAGTTGATAAAAGGATTGTA 57.033 29.630 0.00 0.00 0.00 2.41
2413 2515 8.190784 GGTGATAACCAGTTGATAAAAGGATTG 58.809 37.037 0.00 0.00 0.00 2.67
2414 2516 7.342026 GGGTGATAACCAGTTGATAAAAGGATT 59.658 37.037 0.36 0.00 0.00 3.01
2417 2519 5.949354 TGGGTGATAACCAGTTGATAAAAGG 59.051 40.000 0.36 0.00 33.23 3.11
2419 2521 6.307776 TGTGGGTGATAACCAGTTGATAAAA 58.692 36.000 0.36 0.00 39.00 1.52
2421 2523 5.506730 TGTGGGTGATAACCAGTTGATAA 57.493 39.130 0.36 0.00 39.00 1.75
2422 2524 5.221945 TGTTGTGGGTGATAACCAGTTGATA 60.222 40.000 0.36 0.00 39.00 2.15
2423 2525 4.079253 GTTGTGGGTGATAACCAGTTGAT 58.921 43.478 0.36 0.00 39.00 2.57
2424 2526 3.117851 TGTTGTGGGTGATAACCAGTTGA 60.118 43.478 0.36 0.00 39.00 3.18
2425 2527 3.218453 TGTTGTGGGTGATAACCAGTTG 58.782 45.455 0.36 0.00 39.00 3.16
2426 2528 3.137544 TCTGTTGTGGGTGATAACCAGTT 59.862 43.478 0.36 0.00 39.00 3.16
2427 2529 2.708861 TCTGTTGTGGGTGATAACCAGT 59.291 45.455 0.36 0.00 39.00 4.00
2428 2530 3.417069 TCTGTTGTGGGTGATAACCAG 57.583 47.619 0.36 0.00 39.00 4.00
2429 2531 3.866703 TTCTGTTGTGGGTGATAACCA 57.133 42.857 0.36 0.00 35.14 3.67
2430 2532 4.142038 ACTTTCTGTTGTGGGTGATAACC 58.858 43.478 0.00 0.00 0.00 2.85
2431 2533 5.995897 AGTACTTTCTGTTGTGGGTGATAAC 59.004 40.000 0.00 0.00 0.00 1.89
2470 2572 9.306777 TCAGATTCAGAACTGCAGATATATACT 57.693 33.333 23.35 7.64 34.57 2.12
2471 2573 9.920133 TTCAGATTCAGAACTGCAGATATATAC 57.080 33.333 23.35 5.42 34.57 1.47
2519 2642 3.589881 GCGTGCATGGAGCCATCC 61.590 66.667 8.27 0.00 46.87 3.51
2520 2643 0.886043 TATGCGTGCATGGAGCCATC 60.886 55.000 17.21 0.00 44.83 3.51
2756 2965 2.747855 GCGAAGGTGAAGGGCTGG 60.748 66.667 0.00 0.00 0.00 4.85
2883 3092 4.722700 GGGCCGGAGCAGCTTCAA 62.723 66.667 5.05 0.00 42.56 2.69
3020 3229 1.738099 CTGGTTCCGCTTCCACTCG 60.738 63.158 0.00 0.00 0.00 4.18
3309 3518 3.782443 GGCCACCTCCCCGTACAG 61.782 72.222 0.00 0.00 0.00 2.74
3318 3527 1.519455 CGTCGATCTTGGCCACCTC 60.519 63.158 3.88 0.92 0.00 3.85
3593 3802 0.468648 GGTACTCCACCTGGTATGGC 59.531 60.000 0.00 0.00 44.79 4.40
3692 3901 1.303561 GAGGCACATGACCCAGCAA 60.304 57.895 0.00 0.00 0.00 3.91
3920 4129 2.336945 TGTCTATGGCATGCTCCAAG 57.663 50.000 18.92 10.23 39.96 3.61
4008 4217 2.623418 TGCCACTCTCTCCCTCTAAA 57.377 50.000 0.00 0.00 0.00 1.85
4039 4248 2.388735 ACATCTTATCAGAGACGGGCA 58.611 47.619 0.00 0.00 30.36 5.36
4058 4267 5.294552 AGAGTAGCAAGAAGAACACACAAAC 59.705 40.000 0.00 0.00 0.00 2.93
4061 4270 4.099419 TGAGAGTAGCAAGAAGAACACACA 59.901 41.667 0.00 0.00 0.00 3.72
4062 4271 4.621991 TGAGAGTAGCAAGAAGAACACAC 58.378 43.478 0.00 0.00 0.00 3.82
4063 4272 4.262207 CCTGAGAGTAGCAAGAAGAACACA 60.262 45.833 0.00 0.00 0.00 3.72
4064 4273 4.241681 CCTGAGAGTAGCAAGAAGAACAC 58.758 47.826 0.00 0.00 0.00 3.32
4066 4275 4.219725 AGACCTGAGAGTAGCAAGAAGAAC 59.780 45.833 0.00 0.00 0.00 3.01
4080 4298 0.537371 TGACGTGCTGAGACCTGAGA 60.537 55.000 0.00 0.00 0.00 3.27
4081 4299 0.315251 TTGACGTGCTGAGACCTGAG 59.685 55.000 0.00 0.00 0.00 3.35
4082 4300 0.315251 CTTGACGTGCTGAGACCTGA 59.685 55.000 0.00 0.00 0.00 3.86
4083 4301 1.287730 GCTTGACGTGCTGAGACCTG 61.288 60.000 0.00 0.00 0.00 4.00
4084 4302 1.005630 GCTTGACGTGCTGAGACCT 60.006 57.895 0.00 0.00 0.00 3.85
4085 4303 0.880278 TTGCTTGACGTGCTGAGACC 60.880 55.000 0.00 0.00 0.00 3.85
4086 4304 0.233332 GTTGCTTGACGTGCTGAGAC 59.767 55.000 0.00 0.00 0.00 3.36
4087 4305 0.179086 TGTTGCTTGACGTGCTGAGA 60.179 50.000 0.00 0.00 0.00 3.27
4111 4329 2.783135 ACTCGGTGACAATTCATTGCT 58.217 42.857 0.00 0.00 41.38 3.91
4142 4365 1.474879 TGACGACAGGATGCGACATTA 59.525 47.619 0.00 0.00 42.53 1.90
4143 4366 0.246360 TGACGACAGGATGCGACATT 59.754 50.000 0.00 0.00 42.53 2.71
4144 4367 0.461548 ATGACGACAGGATGCGACAT 59.538 50.000 0.00 0.00 42.05 3.06
4145 4368 0.458370 CATGACGACAGGATGCGACA 60.458 55.000 0.00 0.00 42.53 4.35
4146 4369 1.148157 CCATGACGACAGGATGCGAC 61.148 60.000 0.14 0.00 42.53 5.19
4147 4370 1.141665 CCATGACGACAGGATGCGA 59.858 57.895 0.14 0.00 42.53 5.10
4148 4371 0.249615 ATCCATGACGACAGGATGCG 60.250 55.000 14.37 0.00 42.53 4.73
4149 4372 2.820059 TATCCATGACGACAGGATGC 57.180 50.000 20.29 0.00 41.97 3.91
4151 4374 5.545588 CTTCAATATCCATGACGACAGGAT 58.454 41.667 17.44 17.44 44.09 3.24
4152 4375 4.740634 GCTTCAATATCCATGACGACAGGA 60.741 45.833 0.14 4.97 35.59 3.86
4153 4376 3.496130 GCTTCAATATCCATGACGACAGG 59.504 47.826 0.00 0.00 0.00 4.00
4154 4377 3.183172 CGCTTCAATATCCATGACGACAG 59.817 47.826 0.00 0.00 0.00 3.51
4155 4378 3.123050 CGCTTCAATATCCATGACGACA 58.877 45.455 0.00 0.00 0.00 4.35
4156 4379 2.476619 CCGCTTCAATATCCATGACGAC 59.523 50.000 0.00 0.00 0.00 4.34
4157 4380 2.102420 ACCGCTTCAATATCCATGACGA 59.898 45.455 0.00 0.00 0.00 4.20
4158 4381 2.221749 CACCGCTTCAATATCCATGACG 59.778 50.000 0.00 0.00 0.00 4.35
4159 4382 2.031682 GCACCGCTTCAATATCCATGAC 60.032 50.000 0.00 0.00 0.00 3.06
4160 4383 2.221169 GCACCGCTTCAATATCCATGA 58.779 47.619 0.00 0.00 0.00 3.07
4165 4388 5.408299 TGTATACATGCACCGCTTCAATATC 59.592 40.000 0.08 0.00 0.00 1.63
4197 4420 2.488528 CGGAGGGAGTGTATAGCAGGTA 60.489 54.545 0.00 0.00 0.00 3.08
4198 4421 1.754555 CGGAGGGAGTGTATAGCAGGT 60.755 57.143 0.00 0.00 0.00 4.00
4199 4422 0.962489 CGGAGGGAGTGTATAGCAGG 59.038 60.000 0.00 0.00 0.00 4.85
4201 4424 2.029623 GAACGGAGGGAGTGTATAGCA 58.970 52.381 0.00 0.00 0.00 3.49
4202 4425 1.001597 CGAACGGAGGGAGTGTATAGC 60.002 57.143 0.00 0.00 0.00 2.97
4203 4426 1.607628 CCGAACGGAGGGAGTGTATAG 59.392 57.143 7.53 0.00 37.50 1.31
4204 4427 1.212688 TCCGAACGGAGGGAGTGTATA 59.787 52.381 12.04 0.00 39.76 1.47
4205 4428 0.033796 TCCGAACGGAGGGAGTGTAT 60.034 55.000 12.04 0.00 39.76 2.29
4206 4429 0.251297 TTCCGAACGGAGGGAGTGTA 60.251 55.000 15.34 0.00 46.06 2.90
4207 4430 1.117142 TTTCCGAACGGAGGGAGTGT 61.117 55.000 15.34 0.00 46.06 3.55
4208 4431 0.249398 ATTTCCGAACGGAGGGAGTG 59.751 55.000 15.34 0.00 46.06 3.51
4209 4432 1.856629 TATTTCCGAACGGAGGGAGT 58.143 50.000 15.34 1.96 46.06 3.85
4210 4433 2.167900 AGTTATTTCCGAACGGAGGGAG 59.832 50.000 15.34 0.00 46.06 4.30
4211 4434 2.093869 CAGTTATTTCCGAACGGAGGGA 60.094 50.000 15.34 7.17 46.06 4.20
4212 4435 2.093869 TCAGTTATTTCCGAACGGAGGG 60.094 50.000 15.34 3.18 46.06 4.30
4213 4436 2.928116 GTCAGTTATTTCCGAACGGAGG 59.072 50.000 15.34 2.59 46.06 4.30
4214 4437 2.597305 CGTCAGTTATTTCCGAACGGAG 59.403 50.000 15.34 3.45 46.06 4.63
4215 4438 2.598589 CGTCAGTTATTTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
4216 4439 1.657094 CCGTCAGTTATTTCCGAACGG 59.343 52.381 6.94 6.94 31.85 4.44
4217 4440 1.657094 CCCGTCAGTTATTTCCGAACG 59.343 52.381 0.00 0.00 31.85 3.95
4218 4441 2.691927 ACCCGTCAGTTATTTCCGAAC 58.308 47.619 0.00 0.00 0.00 3.95
4219 4442 3.405823 AACCCGTCAGTTATTTCCGAA 57.594 42.857 0.00 0.00 0.00 4.30
4220 4443 3.405823 AAACCCGTCAGTTATTTCCGA 57.594 42.857 0.00 0.00 0.00 4.55
4221 4444 4.692155 ACTAAAACCCGTCAGTTATTTCCG 59.308 41.667 0.00 0.00 0.00 4.30
4222 4445 6.205270 TCAACTAAAACCCGTCAGTTATTTCC 59.795 38.462 0.00 0.00 30.31 3.13
4223 4446 7.193377 TCAACTAAAACCCGTCAGTTATTTC 57.807 36.000 0.00 0.00 30.31 2.17
4224 4447 7.754851 ATCAACTAAAACCCGTCAGTTATTT 57.245 32.000 0.00 0.00 30.31 1.40
4225 4448 8.851541 TTATCAACTAAAACCCGTCAGTTATT 57.148 30.769 0.00 0.00 30.31 1.40
4226 4449 8.851541 TTTATCAACTAAAACCCGTCAGTTAT 57.148 30.769 0.00 0.00 30.31 1.89
4227 4450 8.674263 TTTTATCAACTAAAACCCGTCAGTTA 57.326 30.769 0.00 0.00 34.99 2.24
4228 4451 7.571080 TTTTATCAACTAAAACCCGTCAGTT 57.429 32.000 0.00 0.00 34.99 3.16
4238 4461 7.556733 ACTGACGTGGTTTTATCAACTAAAA 57.443 32.000 0.00 0.00 37.05 1.52
4239 4462 7.556733 AACTGACGTGGTTTTATCAACTAAA 57.443 32.000 0.00 0.00 0.00 1.85
4240 4463 8.836268 ATAACTGACGTGGTTTTATCAACTAA 57.164 30.769 0.00 0.00 0.00 2.24
4241 4464 8.836268 AATAACTGACGTGGTTTTATCAACTA 57.164 30.769 0.00 0.00 0.00 2.24
4242 4465 7.739498 AATAACTGACGTGGTTTTATCAACT 57.261 32.000 0.00 0.00 0.00 3.16
4243 4466 7.267600 CGAAATAACTGACGTGGTTTTATCAAC 59.732 37.037 0.00 0.00 0.00 3.18
4244 4467 7.171167 TCGAAATAACTGACGTGGTTTTATCAA 59.829 33.333 0.00 0.00 0.00 2.57
4245 4468 6.645827 TCGAAATAACTGACGTGGTTTTATCA 59.354 34.615 0.00 0.00 0.00 2.15
4246 4469 7.052565 TCGAAATAACTGACGTGGTTTTATC 57.947 36.000 0.00 0.00 0.00 1.75
4247 4470 7.424227 TTCGAAATAACTGACGTGGTTTTAT 57.576 32.000 0.00 0.00 0.00 1.40
4248 4471 6.841443 TTCGAAATAACTGACGTGGTTTTA 57.159 33.333 0.00 0.00 0.00 1.52
4249 4472 5.738118 TTCGAAATAACTGACGTGGTTTT 57.262 34.783 0.00 0.00 0.00 2.43
4250 4473 5.504392 GTTTCGAAATAACTGACGTGGTTT 58.496 37.500 14.69 0.00 0.00 3.27
4251 4474 4.318263 CGTTTCGAAATAACTGACGTGGTT 60.318 41.667 14.69 0.00 0.00 3.67
4252 4475 3.182972 CGTTTCGAAATAACTGACGTGGT 59.817 43.478 14.69 0.00 0.00 4.16
4253 4476 3.422603 CCGTTTCGAAATAACTGACGTGG 60.423 47.826 14.69 0.00 0.00 4.94
4254 4477 3.426191 TCCGTTTCGAAATAACTGACGTG 59.574 43.478 14.69 6.22 0.00 4.49
4255 4478 3.641648 TCCGTTTCGAAATAACTGACGT 58.358 40.909 14.69 0.00 0.00 4.34
4256 4479 3.060363 CCTCCGTTTCGAAATAACTGACG 59.940 47.826 14.69 11.33 0.00 4.35
4257 4480 3.992427 ACCTCCGTTTCGAAATAACTGAC 59.008 43.478 14.69 0.00 0.00 3.51
4258 4481 4.261578 ACCTCCGTTTCGAAATAACTGA 57.738 40.909 14.69 3.29 0.00 3.41
4259 4482 5.166398 ACTACCTCCGTTTCGAAATAACTG 58.834 41.667 14.69 6.06 0.00 3.16
4260 4483 5.397142 ACTACCTCCGTTTCGAAATAACT 57.603 39.130 14.69 0.00 0.00 2.24
4261 4484 7.761651 ATTACTACCTCCGTTTCGAAATAAC 57.238 36.000 14.69 0.69 0.00 1.89
4264 4487 9.688592 CTAATATTACTACCTCCGTTTCGAAAT 57.311 33.333 14.69 0.00 0.00 2.17
4265 4488 8.902806 TCTAATATTACTACCTCCGTTTCGAAA 58.097 33.333 6.47 6.47 0.00 3.46
4266 4489 8.450578 TCTAATATTACTACCTCCGTTTCGAA 57.549 34.615 0.00 0.00 0.00 3.71
4267 4490 8.450578 TTCTAATATTACTACCTCCGTTTCGA 57.549 34.615 0.00 0.00 0.00 3.71
4268 4491 9.688592 ATTTCTAATATTACTACCTCCGTTTCG 57.311 33.333 0.00 0.00 0.00 3.46
4289 4512 9.646522 AAGATTAACCTGCCATATTGTATTTCT 57.353 29.630 0.00 0.00 0.00 2.52
4295 4518 9.289782 GAGATAAAGATTAACCTGCCATATTGT 57.710 33.333 0.00 0.00 0.00 2.71
4296 4519 8.734386 GGAGATAAAGATTAACCTGCCATATTG 58.266 37.037 0.00 0.00 0.00 1.90
4297 4520 8.448008 TGGAGATAAAGATTAACCTGCCATATT 58.552 33.333 0.00 0.00 0.00 1.28
4298 4521 7.885399 GTGGAGATAAAGATTAACCTGCCATAT 59.115 37.037 0.00 0.00 0.00 1.78
4299 4522 7.224297 GTGGAGATAAAGATTAACCTGCCATA 58.776 38.462 0.00 0.00 0.00 2.74
4300 4523 6.064717 GTGGAGATAAAGATTAACCTGCCAT 58.935 40.000 0.00 0.00 0.00 4.40
4301 4524 5.437060 GTGGAGATAAAGATTAACCTGCCA 58.563 41.667 0.00 0.00 0.00 4.92
4302 4525 4.822350 GGTGGAGATAAAGATTAACCTGCC 59.178 45.833 0.00 0.00 0.00 4.85
4303 4526 5.437060 TGGTGGAGATAAAGATTAACCTGC 58.563 41.667 0.00 0.00 0.00 4.85
4304 4527 6.653989 ACTGGTGGAGATAAAGATTAACCTG 58.346 40.000 0.00 0.00 0.00 4.00
4305 4528 6.893020 ACTGGTGGAGATAAAGATTAACCT 57.107 37.500 0.00 0.00 0.00 3.50
4306 4529 9.628500 AAATACTGGTGGAGATAAAGATTAACC 57.372 33.333 0.00 0.00 0.00 2.85
4311 4534 9.343539 GCTTTAAATACTGGTGGAGATAAAGAT 57.656 33.333 0.00 0.00 0.00 2.40
4312 4535 8.325787 TGCTTTAAATACTGGTGGAGATAAAGA 58.674 33.333 0.00 0.00 0.00 2.52
4313 4536 8.506168 TGCTTTAAATACTGGTGGAGATAAAG 57.494 34.615 0.00 0.00 0.00 1.85
4314 4537 9.474313 AATGCTTTAAATACTGGTGGAGATAAA 57.526 29.630 0.00 0.00 0.00 1.40
4316 4539 9.778741 CTAATGCTTTAAATACTGGTGGAGATA 57.221 33.333 0.00 0.00 0.00 1.98
4317 4540 8.275040 ACTAATGCTTTAAATACTGGTGGAGAT 58.725 33.333 0.00 0.00 0.00 2.75
4318 4541 7.630082 ACTAATGCTTTAAATACTGGTGGAGA 58.370 34.615 0.00 0.00 0.00 3.71
4319 4542 7.865706 ACTAATGCTTTAAATACTGGTGGAG 57.134 36.000 0.00 0.00 0.00 3.86
4320 4543 8.107095 AGAACTAATGCTTTAAATACTGGTGGA 58.893 33.333 0.00 0.00 0.00 4.02
4321 4544 8.281212 AGAACTAATGCTTTAAATACTGGTGG 57.719 34.615 0.00 0.00 0.00 4.61
4323 4546 9.953565 TGTAGAACTAATGCTTTAAATACTGGT 57.046 29.630 0.00 0.00 0.00 4.00
4332 4555 9.555727 GTTGGGATATGTAGAACTAATGCTTTA 57.444 33.333 0.00 0.00 0.00 1.85
4333 4556 8.052748 TGTTGGGATATGTAGAACTAATGCTTT 58.947 33.333 0.00 0.00 0.00 3.51
4334 4557 7.573710 TGTTGGGATATGTAGAACTAATGCTT 58.426 34.615 0.00 0.00 0.00 3.91
4335 4558 7.136822 TGTTGGGATATGTAGAACTAATGCT 57.863 36.000 0.00 0.00 0.00 3.79
4336 4559 7.801716 TTGTTGGGATATGTAGAACTAATGC 57.198 36.000 0.00 0.00 0.00 3.56
4337 4560 9.559732 TGATTGTTGGGATATGTAGAACTAATG 57.440 33.333 0.00 0.00 0.00 1.90
4338 4561 9.561069 GTGATTGTTGGGATATGTAGAACTAAT 57.439 33.333 0.00 0.00 0.00 1.73
4339 4562 8.544622 TGTGATTGTTGGGATATGTAGAACTAA 58.455 33.333 0.00 0.00 0.00 2.24
4340 4563 8.084985 TGTGATTGTTGGGATATGTAGAACTA 57.915 34.615 0.00 0.00 0.00 2.24
4341 4564 6.957631 TGTGATTGTTGGGATATGTAGAACT 58.042 36.000 0.00 0.00 0.00 3.01
4342 4565 7.624360 TTGTGATTGTTGGGATATGTAGAAC 57.376 36.000 0.00 0.00 0.00 3.01
4343 4566 8.106462 TCTTTGTGATTGTTGGGATATGTAGAA 58.894 33.333 0.00 0.00 0.00 2.10
4344 4567 7.629157 TCTTTGTGATTGTTGGGATATGTAGA 58.371 34.615 0.00 0.00 0.00 2.59
4345 4568 7.864108 TCTTTGTGATTGTTGGGATATGTAG 57.136 36.000 0.00 0.00 0.00 2.74
4346 4569 8.274322 AGATCTTTGTGATTGTTGGGATATGTA 58.726 33.333 0.00 0.00 35.14 2.29
4347 4570 7.121382 AGATCTTTGTGATTGTTGGGATATGT 58.879 34.615 0.00 0.00 35.14 2.29
4348 4571 7.578310 AGATCTTTGTGATTGTTGGGATATG 57.422 36.000 0.00 0.00 35.14 1.78
4349 4572 8.274322 TGTAGATCTTTGTGATTGTTGGGATAT 58.726 33.333 0.00 0.00 35.14 1.63
4350 4573 7.552687 GTGTAGATCTTTGTGATTGTTGGGATA 59.447 37.037 0.00 0.00 35.14 2.59
4351 4574 6.375455 GTGTAGATCTTTGTGATTGTTGGGAT 59.625 38.462 0.00 0.00 35.14 3.85
4352 4575 5.705441 GTGTAGATCTTTGTGATTGTTGGGA 59.295 40.000 0.00 0.00 35.14 4.37
4353 4576 5.390885 CGTGTAGATCTTTGTGATTGTTGGG 60.391 44.000 0.00 0.00 35.14 4.12
4354 4577 5.179368 ACGTGTAGATCTTTGTGATTGTTGG 59.821 40.000 0.00 0.00 35.14 3.77
4355 4578 6.146184 AGACGTGTAGATCTTTGTGATTGTTG 59.854 38.462 0.00 0.00 35.14 3.33
4356 4579 6.223852 AGACGTGTAGATCTTTGTGATTGTT 58.776 36.000 0.00 0.00 35.14 2.83
4357 4580 5.784177 AGACGTGTAGATCTTTGTGATTGT 58.216 37.500 0.00 0.00 35.14 2.71
4358 4581 5.863935 TGAGACGTGTAGATCTTTGTGATTG 59.136 40.000 0.00 0.00 35.14 2.67
4359 4582 6.025749 TGAGACGTGTAGATCTTTGTGATT 57.974 37.500 0.00 0.00 35.14 2.57
4360 4583 5.644977 TGAGACGTGTAGATCTTTGTGAT 57.355 39.130 0.00 0.00 38.27 3.06
4361 4584 5.447624 TTGAGACGTGTAGATCTTTGTGA 57.552 39.130 0.00 0.00 0.00 3.58
4362 4585 6.587990 AGATTTGAGACGTGTAGATCTTTGTG 59.412 38.462 0.00 0.00 0.00 3.33
4363 4586 6.692486 AGATTTGAGACGTGTAGATCTTTGT 58.308 36.000 0.00 0.00 0.00 2.83
4364 4587 8.689251 TTAGATTTGAGACGTGTAGATCTTTG 57.311 34.615 0.00 0.00 0.00 2.77
4366 4589 9.953697 GTATTAGATTTGAGACGTGTAGATCTT 57.046 33.333 0.00 0.00 0.00 2.40
4367 4590 9.121658 TGTATTAGATTTGAGACGTGTAGATCT 57.878 33.333 0.00 0.00 0.00 2.75
4368 4591 9.171701 GTGTATTAGATTTGAGACGTGTAGATC 57.828 37.037 0.00 0.00 0.00 2.75
4369 4592 8.683615 TGTGTATTAGATTTGAGACGTGTAGAT 58.316 33.333 0.00 0.00 0.00 1.98
4370 4593 7.966753 GTGTGTATTAGATTTGAGACGTGTAGA 59.033 37.037 0.00 0.00 0.00 2.59
4371 4594 7.753580 TGTGTGTATTAGATTTGAGACGTGTAG 59.246 37.037 0.00 0.00 0.00 2.74
4372 4595 7.595604 TGTGTGTATTAGATTTGAGACGTGTA 58.404 34.615 0.00 0.00 0.00 2.90
4373 4596 6.452242 TGTGTGTATTAGATTTGAGACGTGT 58.548 36.000 0.00 0.00 0.00 4.49
4374 4597 6.944557 TGTGTGTATTAGATTTGAGACGTG 57.055 37.500 0.00 0.00 0.00 4.49
4375 4598 6.472486 CGATGTGTGTATTAGATTTGAGACGT 59.528 38.462 0.00 0.00 0.00 4.34
4376 4599 6.472486 ACGATGTGTGTATTAGATTTGAGACG 59.528 38.462 0.00 0.00 0.00 4.18
4377 4600 7.043325 GGACGATGTGTGTATTAGATTTGAGAC 60.043 40.741 0.00 0.00 0.00 3.36
4378 4601 6.978659 GGACGATGTGTGTATTAGATTTGAGA 59.021 38.462 0.00 0.00 0.00 3.27
4379 4602 6.201044 GGGACGATGTGTGTATTAGATTTGAG 59.799 42.308 0.00 0.00 0.00 3.02
4380 4603 6.046593 GGGACGATGTGTGTATTAGATTTGA 58.953 40.000 0.00 0.00 0.00 2.69
4381 4604 5.815222 TGGGACGATGTGTGTATTAGATTTG 59.185 40.000 0.00 0.00 0.00 2.32
4382 4605 5.984725 TGGGACGATGTGTGTATTAGATTT 58.015 37.500 0.00 0.00 0.00 2.17
4383 4606 5.607939 TGGGACGATGTGTGTATTAGATT 57.392 39.130 0.00 0.00 0.00 2.40
4384 4607 5.607939 TTGGGACGATGTGTGTATTAGAT 57.392 39.130 0.00 0.00 0.00 1.98
4385 4608 5.356426 CATTGGGACGATGTGTGTATTAGA 58.644 41.667 0.00 0.00 0.00 2.10
4386 4609 4.024893 GCATTGGGACGATGTGTGTATTAG 60.025 45.833 0.00 0.00 0.00 1.73
4387 4610 3.874543 GCATTGGGACGATGTGTGTATTA 59.125 43.478 0.00 0.00 0.00 0.98
4388 4611 2.682856 GCATTGGGACGATGTGTGTATT 59.317 45.455 0.00 0.00 0.00 1.89
4389 4612 2.288666 GCATTGGGACGATGTGTGTAT 58.711 47.619 0.00 0.00 0.00 2.29
4390 4613 1.677518 GGCATTGGGACGATGTGTGTA 60.678 52.381 0.00 0.00 0.00 2.90
4391 4614 0.960364 GGCATTGGGACGATGTGTGT 60.960 55.000 0.00 0.00 0.00 3.72
4392 4615 1.656818 GGGCATTGGGACGATGTGTG 61.657 60.000 0.00 0.00 0.00 3.82
4393 4616 1.378514 GGGCATTGGGACGATGTGT 60.379 57.895 0.00 0.00 0.00 3.72
4394 4617 2.120909 GGGGCATTGGGACGATGTG 61.121 63.158 0.00 0.00 0.00 3.21
4395 4618 2.275418 GGGGCATTGGGACGATGT 59.725 61.111 0.00 0.00 0.00 3.06
4396 4619 2.519302 GGGGGCATTGGGACGATG 60.519 66.667 0.00 0.00 0.00 3.84
4397 4620 2.696125 AGGGGGCATTGGGACGAT 60.696 61.111 0.00 0.00 0.00 3.73
4398 4621 3.727258 CAGGGGGCATTGGGACGA 61.727 66.667 0.00 0.00 0.00 4.20
4399 4622 3.995506 GACAGGGGGCATTGGGACG 62.996 68.421 0.00 0.00 0.00 4.79
4400 4623 2.043953 GACAGGGGGCATTGGGAC 60.044 66.667 0.00 0.00 0.00 4.46
4401 4624 1.442886 AAAGACAGGGGGCATTGGGA 61.443 55.000 0.00 0.00 0.00 4.37
4402 4625 1.079073 AAAGACAGGGGGCATTGGG 59.921 57.895 0.00 0.00 0.00 4.12
4403 4626 1.259840 CCAAAGACAGGGGGCATTGG 61.260 60.000 0.00 0.00 0.00 3.16
4404 4627 0.251742 TCCAAAGACAGGGGGCATTG 60.252 55.000 0.00 0.00 0.00 2.82
4405 4628 0.486879 TTCCAAAGACAGGGGGCATT 59.513 50.000 0.00 0.00 0.00 3.56
4406 4629 0.486879 TTTCCAAAGACAGGGGGCAT 59.513 50.000 0.00 0.00 0.00 4.40
4407 4630 0.263172 TTTTCCAAAGACAGGGGGCA 59.737 50.000 0.00 0.00 0.00 5.36
4408 4631 0.679505 GTTTTCCAAAGACAGGGGGC 59.320 55.000 0.00 0.00 0.00 5.80
4409 4632 2.080654 TGTTTTCCAAAGACAGGGGG 57.919 50.000 0.00 0.00 0.00 5.40
4410 4633 4.479786 TTTTGTTTTCCAAAGACAGGGG 57.520 40.909 0.00 0.00 43.63 4.79
4411 4634 5.351189 CAGTTTTTGTTTTCCAAAGACAGGG 59.649 40.000 10.01 0.00 45.76 4.45
4412 4635 5.351189 CCAGTTTTTGTTTTCCAAAGACAGG 59.649 40.000 10.01 7.89 45.76 4.00
4413 4636 5.163864 GCCAGTTTTTGTTTTCCAAAGACAG 60.164 40.000 10.01 3.59 45.76 3.51
4414 4637 4.693095 GCCAGTTTTTGTTTTCCAAAGACA 59.307 37.500 10.01 0.00 45.76 3.41
4415 4638 4.935205 AGCCAGTTTTTGTTTTCCAAAGAC 59.065 37.500 0.00 0.00 44.44 3.01
4416 4639 5.159273 AGCCAGTTTTTGTTTTCCAAAGA 57.841 34.783 0.00 0.00 43.63 2.52
4417 4640 5.630061 CAAGCCAGTTTTTGTTTTCCAAAG 58.370 37.500 0.00 0.00 43.63 2.77
4418 4641 4.083057 GCAAGCCAGTTTTTGTTTTCCAAA 60.083 37.500 0.00 0.00 41.25 3.28
4419 4642 3.438434 GCAAGCCAGTTTTTGTTTTCCAA 59.562 39.130 0.00 0.00 0.00 3.53
4420 4643 3.006247 GCAAGCCAGTTTTTGTTTTCCA 58.994 40.909 0.00 0.00 0.00 3.53
4421 4644 3.270027 AGCAAGCCAGTTTTTGTTTTCC 58.730 40.909 0.00 0.00 0.00 3.13
4422 4645 4.944962 AAGCAAGCCAGTTTTTGTTTTC 57.055 36.364 0.00 0.00 0.00 2.29
4824 5047 4.789075 TTCCTCTACACGCGCGGC 62.789 66.667 35.22 0.00 0.00 6.53
4825 5048 1.286354 TTTTTCCTCTACACGCGCGG 61.286 55.000 35.22 24.36 0.00 6.46
4826 5049 2.146954 TTTTTCCTCTACACGCGCG 58.853 52.632 30.96 30.96 0.00 6.86
4842 5065 0.517316 GATCGTGCAGACGCCTTTTT 59.483 50.000 0.00 0.00 45.68 1.94
4843 5066 0.320771 AGATCGTGCAGACGCCTTTT 60.321 50.000 0.00 0.00 45.68 2.27
4844 5067 0.320771 AAGATCGTGCAGACGCCTTT 60.321 50.000 0.00 0.00 45.68 3.11
4845 5068 0.737715 GAAGATCGTGCAGACGCCTT 60.738 55.000 0.00 0.00 45.68 4.35
4846 5069 1.153745 GAAGATCGTGCAGACGCCT 60.154 57.895 0.00 0.00 45.68 5.52
4847 5070 1.142778 GAGAAGATCGTGCAGACGCC 61.143 60.000 0.00 0.00 45.68 5.68
4848 5071 1.467556 CGAGAAGATCGTGCAGACGC 61.468 60.000 0.00 0.00 46.62 5.19
4849 5072 2.560244 CGAGAAGATCGTGCAGACG 58.440 57.895 0.00 0.00 46.62 4.18
4858 5081 4.951963 CGGGCGGGCGAGAAGATC 62.952 72.222 0.00 0.00 0.00 2.75
4872 5095 4.771356 ACGTGCGTGATCGTCGGG 62.771 66.667 11.06 0.00 39.24 5.14
4873 5096 2.803670 AACGTGCGTGATCGTCGG 60.804 61.111 11.06 0.00 39.39 4.79
4874 5097 1.403225 ATCAACGTGCGTGATCGTCG 61.403 55.000 0.00 5.88 39.39 5.12
4875 5098 0.294887 GATCAACGTGCGTGATCGTC 59.705 55.000 11.78 0.00 39.39 4.20
4876 5099 0.388006 TGATCAACGTGCGTGATCGT 60.388 50.000 18.90 0.74 40.77 3.73
4877 5100 0.023732 GTGATCAACGTGCGTGATCG 59.976 55.000 18.90 0.20 40.77 3.69
4878 5101 3.858040 GTGATCAACGTGCGTGATC 57.142 52.632 17.88 17.88 38.98 2.92
4888 5111 4.023193 AGTTGGAAAATGGACGTGATCAAC 60.023 41.667 0.00 0.00 34.12 3.18
4889 5112 4.023279 CAGTTGGAAAATGGACGTGATCAA 60.023 41.667 0.00 0.00 38.43 2.57
4890 5113 3.501828 CAGTTGGAAAATGGACGTGATCA 59.498 43.478 0.00 0.00 38.43 2.92
4891 5114 4.083581 CAGTTGGAAAATGGACGTGATC 57.916 45.455 0.00 0.00 38.43 2.92
4900 5123 5.499708 AGCGATCGCACAGTTGGAAAATG 62.500 47.826 38.60 0.00 42.82 2.32
4901 5124 1.135689 GCGATCGCACAGTTGGAAAAT 60.136 47.619 33.89 0.00 41.49 1.82
4902 5125 0.237235 GCGATCGCACAGTTGGAAAA 59.763 50.000 33.89 0.00 41.49 2.29
4903 5126 0.602638 AGCGATCGCACAGTTGGAAA 60.603 50.000 38.60 0.00 44.88 3.13
4904 5127 1.005037 AGCGATCGCACAGTTGGAA 60.005 52.632 38.60 0.00 44.88 3.53
4905 5128 1.737735 CAGCGATCGCACAGTTGGA 60.738 57.895 38.60 0.00 44.88 3.53
4906 5129 2.780643 CAGCGATCGCACAGTTGG 59.219 61.111 38.60 16.34 44.88 3.77
4907 5130 2.097160 GCAGCGATCGCACAGTTG 59.903 61.111 38.60 28.13 44.88 3.16
4908 5131 3.121030 GGCAGCGATCGCACAGTT 61.121 61.111 38.60 17.80 44.88 3.16
4914 5137 4.854784 TCAGTCGGCAGCGATCGC 62.855 66.667 32.15 32.15 42.33 4.58
4915 5138 2.202610 TTCAGTCGGCAGCGATCG 60.203 61.111 11.69 11.69 0.00 3.69
4916 5139 2.167861 GGTTCAGTCGGCAGCGATC 61.168 63.158 0.00 0.00 0.00 3.69
4917 5140 2.125512 GGTTCAGTCGGCAGCGAT 60.126 61.111 0.00 0.00 0.00 4.58
4918 5141 4.373116 GGGTTCAGTCGGCAGCGA 62.373 66.667 0.00 0.00 0.00 4.93
4920 5143 3.628646 ATGGGGTTCAGTCGGCAGC 62.629 63.158 0.00 0.00 0.00 5.25
4921 5144 1.450312 GATGGGGTTCAGTCGGCAG 60.450 63.158 0.00 0.00 0.00 4.85
4922 5145 2.668632 GATGGGGTTCAGTCGGCA 59.331 61.111 0.00 0.00 0.00 5.69
4923 5146 2.124695 GGATGGGGTTCAGTCGGC 60.125 66.667 0.00 0.00 0.00 5.54
4924 5147 2.186903 CGGATGGGGTTCAGTCGG 59.813 66.667 0.00 0.00 0.00 4.79
4925 5148 1.153628 GTCGGATGGGGTTCAGTCG 60.154 63.158 0.00 0.00 0.00 4.18
4926 5149 1.153628 CGTCGGATGGGGTTCAGTC 60.154 63.158 0.00 0.00 0.00 3.51
4927 5150 2.978824 CGTCGGATGGGGTTCAGT 59.021 61.111 0.00 0.00 0.00 3.41
4928 5151 2.511600 GCGTCGGATGGGGTTCAG 60.512 66.667 0.00 0.00 0.00 3.02
4929 5152 4.090588 GGCGTCGGATGGGGTTCA 62.091 66.667 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.