Multiple sequence alignment - TraesCS2D01G508300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G508300 chr2D 100.000 3386 0 0 1 3386 601274316 601270931 0.000000e+00 6253.0
1 TraesCS2D01G508300 chr2D 87.931 58 6 1 371 428 377155034 377155090 2.180000e-07 67.6
2 TraesCS2D01G508300 chr2B 90.082 2309 183 20 416 2717 731537216 731534947 0.000000e+00 2953.0
3 TraesCS2D01G508300 chr2B 92.727 1320 80 13 1677 2991 731526317 731525009 0.000000e+00 1892.0
4 TraesCS2D01G508300 chr2B 90.820 305 27 1 1389 1692 731534937 731534633 1.130000e-109 407.0
5 TraesCS2D01G508300 chr2B 89.706 136 13 1 3033 3168 731523425 731523291 4.490000e-39 172.0
6 TraesCS2D01G508300 chr2B 81.287 171 20 1 10 168 731539937 731539767 9.860000e-26 128.0
7 TraesCS2D01G508300 chr2B 97.222 72 2 0 2976 3047 731524164 731524093 4.590000e-24 122.0
8 TraesCS2D01G508300 chr2B 100.000 38 0 0 188 225 731539723 731539686 1.690000e-08 71.3
9 TraesCS2D01G508300 chr7B 80.320 1377 254 14 988 2354 3540185 3541554 0.000000e+00 1026.0
10 TraesCS2D01G508300 chr7D 80.144 1390 260 12 987 2366 60705481 60704098 0.000000e+00 1024.0
11 TraesCS2D01G508300 chr7D 79.848 1320 250 13 1027 2337 62280167 62281479 0.000000e+00 950.0
12 TraesCS2D01G508300 chr7D 79.568 1204 246 0 1135 2338 62260489 62259286 0.000000e+00 861.0
13 TraesCS2D01G508300 chr7D 100.000 216 0 0 3171 3386 407068978 407068763 1.890000e-107 399.0
14 TraesCS2D01G508300 chr7D 88.235 221 21 4 3170 3386 17173400 17173619 3.350000e-65 259.0
15 TraesCS2D01G508300 chr7D 90.385 52 4 1 371 422 18804116 18804066 2.180000e-07 67.6
16 TraesCS2D01G508300 chr7A 80.150 1204 239 0 1135 2338 65329728 65328525 0.000000e+00 900.0
17 TraesCS2D01G508300 chr7A 79.917 1205 236 4 1136 2337 65442032 65443233 0.000000e+00 880.0
18 TraesCS2D01G508300 chr7A 78.409 528 110 2 1128 1653 65559176 65558651 1.160000e-89 340.0
19 TraesCS2D01G508300 chr7A 79.540 435 74 11 987 1412 65050190 65049762 2.550000e-76 296.0
20 TraesCS2D01G508300 chr7A 89.286 56 5 1 372 427 533577678 533577624 6.060000e-08 69.4
21 TraesCS2D01G508300 chr5B 88.636 220 23 2 3169 3386 689558687 689558906 2.000000e-67 267.0
22 TraesCS2D01G508300 chr5B 87.387 222 21 4 3171 3386 21415353 21415573 7.260000e-62 248.0
23 TraesCS2D01G508300 chr2A 88.073 218 24 2 3171 3386 459138747 459138530 1.210000e-64 257.0
24 TraesCS2D01G508300 chr3A 87.558 217 25 1 3172 3386 691453955 691454171 2.020000e-62 250.0
25 TraesCS2D01G508300 chr3A 87.156 218 26 2 3171 3386 669975283 669975066 2.610000e-61 246.0
26 TraesCS2D01G508300 chr3A 84.375 64 10 0 374 437 690715299 690715236 2.820000e-06 63.9
27 TraesCS2D01G508300 chr3D 87.736 212 24 1 3177 3386 601937213 601937424 2.610000e-61 246.0
28 TraesCS2D01G508300 chr3D 91.667 48 4 0 371 418 420822328 420822281 2.180000e-07 67.6
29 TraesCS2D01G508300 chr1B 86.636 217 27 1 3171 3385 499194870 499195086 4.370000e-59 239.0
30 TraesCS2D01G508300 chr4D 92.593 54 3 1 371 424 218516240 218516292 3.620000e-10 76.8
31 TraesCS2D01G508300 chr4D 89.091 55 5 1 371 425 489228385 489228438 2.180000e-07 67.6
32 TraesCS2D01G508300 chr3B 92.157 51 3 1 368 418 236500736 236500687 1.690000e-08 71.3
33 TraesCS2D01G508300 chr6D 88.889 54 5 1 371 424 370847746 370847694 7.840000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G508300 chr2D 601270931 601274316 3385 True 6253.000000 6253 100.000000 1 3386 1 chr2D.!!$R1 3385
1 TraesCS2D01G508300 chr2B 731534633 731539937 5304 True 889.825000 2953 90.547250 10 2717 4 chr2B.!!$R2 2707
2 TraesCS2D01G508300 chr2B 731523291 731526317 3026 True 728.666667 1892 93.218333 1677 3168 3 chr2B.!!$R1 1491
3 TraesCS2D01G508300 chr7B 3540185 3541554 1369 False 1026.000000 1026 80.320000 988 2354 1 chr7B.!!$F1 1366
4 TraesCS2D01G508300 chr7D 60704098 60705481 1383 True 1024.000000 1024 80.144000 987 2366 1 chr7D.!!$R2 1379
5 TraesCS2D01G508300 chr7D 62280167 62281479 1312 False 950.000000 950 79.848000 1027 2337 1 chr7D.!!$F2 1310
6 TraesCS2D01G508300 chr7D 62259286 62260489 1203 True 861.000000 861 79.568000 1135 2338 1 chr7D.!!$R3 1203
7 TraesCS2D01G508300 chr7A 65328525 65329728 1203 True 900.000000 900 80.150000 1135 2338 1 chr7A.!!$R2 1203
8 TraesCS2D01G508300 chr7A 65442032 65443233 1201 False 880.000000 880 79.917000 1136 2337 1 chr7A.!!$F1 1201
9 TraesCS2D01G508300 chr7A 65558651 65559176 525 True 340.000000 340 78.409000 1128 1653 1 chr7A.!!$R3 525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
454 2844 0.035739 TTGGTGGAAGGGTTACGCTC 59.964 55.0 1.61 0.0 0.0 5.03 F
1326 3724 0.027586 GCGATCAAACATACGTGCCC 59.972 55.0 0.00 0.0 0.0 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1549 3947 0.108207 CATGCCATCCCTGAGAGGTC 59.892 60.0 0.0 0.0 31.93 3.85 R
3287 7230 0.034337 ACGTCCACATGCGTACCTTT 59.966 50.0 0.0 0.0 39.72 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.961424 AAAGATGGGGAGGTTTGCG 58.039 52.632 0.00 0.00 0.00 4.85
19 20 0.404040 AAAGATGGGGAGGTTTGCGA 59.596 50.000 0.00 0.00 0.00 5.10
27 28 0.390472 GGAGGTTTGCGAGAGTCTGG 60.390 60.000 0.00 0.00 0.00 3.86
41 42 4.899239 CTGGATGTCCGCCTCGCC 62.899 72.222 0.00 0.00 39.43 5.54
46 47 3.757248 ATGTCCGCCTCGCCAATCC 62.757 63.158 0.00 0.00 0.00 3.01
63 64 0.179023 TCCAAAACCACCACGTACCC 60.179 55.000 0.00 0.00 0.00 3.69
85 86 1.264045 GCCACAGCCTCTCTCCTCTT 61.264 60.000 0.00 0.00 0.00 2.85
87 88 0.823460 CACAGCCTCTCTCCTCTTCC 59.177 60.000 0.00 0.00 0.00 3.46
92 93 1.412937 GCCTCTCTCCTCTTCCTCCAT 60.413 57.143 0.00 0.00 0.00 3.41
93 94 2.318908 CCTCTCTCCTCTTCCTCCATG 58.681 57.143 0.00 0.00 0.00 3.66
95 96 0.388659 CTCTCCTCTTCCTCCATGCG 59.611 60.000 0.00 0.00 0.00 4.73
97 98 1.001631 TCCTCTTCCTCCATGCGGA 59.998 57.895 0.00 0.00 39.79 5.54
101 102 1.139654 CTCTTCCTCCATGCGGAATGA 59.860 52.381 13.18 11.67 42.21 2.57
109 110 1.016627 CATGCGGAATGACGGAATGT 58.983 50.000 0.00 0.00 38.72 2.71
123 124 3.190535 ACGGAATGTCACTGTTATTTGGC 59.809 43.478 0.00 0.00 0.00 4.52
173 202 4.725790 AGGGTTGCAGCTCATATTTTTC 57.274 40.909 2.31 0.00 0.00 2.29
177 206 6.437162 AGGGTTGCAGCTCATATTTTTCTTTA 59.563 34.615 2.31 0.00 0.00 1.85
178 207 6.531594 GGGTTGCAGCTCATATTTTTCTTTAC 59.468 38.462 0.00 0.00 0.00 2.01
186 215 7.772757 AGCTCATATTTTTCTTTACTGAGGGAG 59.227 37.037 0.00 0.00 31.54 4.30
225 262 4.556942 ATTGATCGGTTACATGCATGTG 57.443 40.909 36.72 22.57 41.89 3.21
226 263 2.984562 TGATCGGTTACATGCATGTGT 58.015 42.857 36.72 19.43 41.89 3.72
228 265 2.760634 TCGGTTACATGCATGTGTCT 57.239 45.000 36.72 16.68 41.89 3.41
230 267 3.517602 TCGGTTACATGCATGTGTCTAC 58.482 45.455 36.72 26.69 41.89 2.59
231 268 3.056465 TCGGTTACATGCATGTGTCTACA 60.056 43.478 36.72 17.19 41.89 2.74
234 271 5.390613 GGTTACATGCATGTGTCTACAAAC 58.609 41.667 36.72 28.75 41.89 2.93
235 272 5.049060 GGTTACATGCATGTGTCTACAAACA 60.049 40.000 36.72 14.30 41.89 2.83
236 273 6.349280 GGTTACATGCATGTGTCTACAAACAT 60.349 38.462 36.72 12.07 41.89 2.71
241 278 3.825308 CATGTGTCTACAAACATGTGGC 58.175 45.455 0.00 0.00 45.56 5.01
243 280 3.282885 TGTGTCTACAAACATGTGGCAA 58.717 40.909 0.00 0.00 32.88 4.52
245 282 5.066593 TGTGTCTACAAACATGTGGCAATA 58.933 37.500 0.00 0.00 32.88 1.90
246 283 5.709631 TGTGTCTACAAACATGTGGCAATAT 59.290 36.000 0.00 0.00 32.88 1.28
247 284 6.029607 GTGTCTACAAACATGTGGCAATATG 58.970 40.000 0.00 10.44 0.00 1.78
248 285 5.709631 TGTCTACAAACATGTGGCAATATGT 59.290 36.000 11.56 11.56 39.58 2.29
249 286 6.881602 TGTCTACAAACATGTGGCAATATGTA 59.118 34.615 16.14 7.53 37.16 2.29
250 287 7.555914 TGTCTACAAACATGTGGCAATATGTAT 59.444 33.333 16.14 9.52 37.16 2.29
251 288 9.051679 GTCTACAAACATGTGGCAATATGTATA 57.948 33.333 16.14 9.99 37.16 1.47
252 289 9.271828 TCTACAAACATGTGGCAATATGTATAG 57.728 33.333 16.14 16.20 37.16 1.31
253 290 9.271828 CTACAAACATGTGGCAATATGTATAGA 57.728 33.333 16.14 5.36 37.16 1.98
254 291 8.518430 ACAAACATGTGGCAATATGTATAGAA 57.482 30.769 16.14 0.00 37.16 2.10
255 292 8.965819 ACAAACATGTGGCAATATGTATAGAAA 58.034 29.630 16.14 0.00 37.16 2.52
256 293 9.800433 CAAACATGTGGCAATATGTATAGAAAA 57.200 29.630 16.14 0.00 37.16 2.29
283 320 6.106673 ACACTATCAGTTATTTGACGGAAGG 58.893 40.000 0.00 0.00 0.00 3.46
284 321 5.006746 CACTATCAGTTATTTGACGGAAGGC 59.993 44.000 0.00 0.00 42.12 4.35
285 322 2.706890 TCAGTTATTTGACGGAAGGCC 58.293 47.619 0.00 0.00 39.67 5.19
286 323 2.304761 TCAGTTATTTGACGGAAGGCCT 59.695 45.455 0.00 0.00 39.67 5.19
287 324 3.081804 CAGTTATTTGACGGAAGGCCTT 58.918 45.455 20.65 20.65 39.67 4.35
288 325 3.127030 CAGTTATTTGACGGAAGGCCTTC 59.873 47.826 33.67 33.67 39.67 3.46
289 326 3.009143 AGTTATTTGACGGAAGGCCTTCT 59.991 43.478 37.72 23.96 39.67 2.85
290 327 4.224370 AGTTATTTGACGGAAGGCCTTCTA 59.776 41.667 37.72 21.49 39.67 2.10
291 328 3.713826 ATTTGACGGAAGGCCTTCTAA 57.286 42.857 37.72 25.60 39.67 2.10
292 329 3.713826 TTTGACGGAAGGCCTTCTAAT 57.286 42.857 37.72 25.71 39.67 1.73
293 330 2.691409 TGACGGAAGGCCTTCTAATG 57.309 50.000 37.72 27.45 39.67 1.90
294 331 2.184533 TGACGGAAGGCCTTCTAATGA 58.815 47.619 37.72 19.32 39.67 2.57
295 332 2.093658 TGACGGAAGGCCTTCTAATGAC 60.094 50.000 37.72 25.43 39.67 3.06
296 333 2.168728 GACGGAAGGCCTTCTAATGACT 59.831 50.000 37.72 16.70 39.45 3.41
297 334 3.371965 ACGGAAGGCCTTCTAATGACTA 58.628 45.455 37.72 0.00 39.45 2.59
298 335 3.132467 ACGGAAGGCCTTCTAATGACTAC 59.868 47.826 37.72 20.54 39.45 2.73
299 336 3.132289 CGGAAGGCCTTCTAATGACTACA 59.868 47.826 37.72 0.00 39.45 2.74
300 337 4.202264 CGGAAGGCCTTCTAATGACTACAT 60.202 45.833 37.72 4.33 39.45 2.29
301 338 5.059833 GGAAGGCCTTCTAATGACTACATG 58.940 45.833 37.72 0.00 39.45 3.21
302 339 4.078639 AGGCCTTCTAATGACTACATGC 57.921 45.455 0.00 0.00 36.79 4.06
303 340 3.455910 AGGCCTTCTAATGACTACATGCA 59.544 43.478 0.00 0.00 36.79 3.96
304 341 4.103785 AGGCCTTCTAATGACTACATGCAT 59.896 41.667 0.00 0.00 36.79 3.96
305 342 4.823989 GGCCTTCTAATGACTACATGCATT 59.176 41.667 0.00 0.00 38.24 3.56
306 343 5.300286 GGCCTTCTAATGACTACATGCATTT 59.700 40.000 0.00 0.00 36.27 2.32
307 344 6.183360 GGCCTTCTAATGACTACATGCATTTT 60.183 38.462 0.00 0.00 36.27 1.82
308 345 7.260603 GCCTTCTAATGACTACATGCATTTTT 58.739 34.615 0.00 0.00 36.27 1.94
328 365 5.371115 TTTTGACGGAAAGCCTTCTAATG 57.629 39.130 0.00 0.00 33.76 1.90
329 366 3.973206 TGACGGAAAGCCTTCTAATGA 57.027 42.857 0.00 0.00 33.76 2.57
330 367 3.596214 TGACGGAAAGCCTTCTAATGAC 58.404 45.455 0.00 0.00 33.76 3.06
331 368 3.260884 TGACGGAAAGCCTTCTAATGACT 59.739 43.478 0.00 0.00 33.76 3.41
332 369 4.464951 TGACGGAAAGCCTTCTAATGACTA 59.535 41.667 0.00 0.00 33.76 2.59
333 370 5.046878 TGACGGAAAGCCTTCTAATGACTAA 60.047 40.000 0.00 0.00 33.76 2.24
334 371 5.801380 ACGGAAAGCCTTCTAATGACTAAA 58.199 37.500 0.00 0.00 0.00 1.85
335 372 6.415573 ACGGAAAGCCTTCTAATGACTAAAT 58.584 36.000 0.00 0.00 0.00 1.40
336 373 7.562135 ACGGAAAGCCTTCTAATGACTAAATA 58.438 34.615 0.00 0.00 0.00 1.40
337 374 7.494952 ACGGAAAGCCTTCTAATGACTAAATAC 59.505 37.037 0.00 0.00 0.00 1.89
338 375 7.494625 CGGAAAGCCTTCTAATGACTAAATACA 59.505 37.037 0.00 0.00 0.00 2.29
339 376 9.343539 GGAAAGCCTTCTAATGACTAAATACAT 57.656 33.333 0.00 0.00 0.00 2.29
369 406 4.461198 CGGAAGGCCTTCTAATAACCAAT 58.539 43.478 37.72 4.82 39.45 3.16
370 407 4.515567 CGGAAGGCCTTCTAATAACCAATC 59.484 45.833 37.72 19.44 39.45 2.67
371 408 5.445964 GGAAGGCCTTCTAATAACCAATCA 58.554 41.667 37.72 0.00 39.45 2.57
372 409 5.299531 GGAAGGCCTTCTAATAACCAATCAC 59.700 44.000 37.72 17.03 39.45 3.06
375 412 6.831976 AGGCCTTCTAATAACCAATCACTAG 58.168 40.000 0.00 0.00 0.00 2.57
376 413 6.387220 AGGCCTTCTAATAACCAATCACTAGT 59.613 38.462 0.00 0.00 0.00 2.57
377 414 6.483640 GGCCTTCTAATAACCAATCACTAGTG 59.516 42.308 17.17 17.17 0.00 2.74
405 442 8.428186 AAAAACGCTCTTATATTATGGAACGA 57.572 30.769 0.00 0.00 0.00 3.85
406 443 8.428186 AAAACGCTCTTATATTATGGAACGAA 57.572 30.769 0.00 0.00 0.00 3.85
407 444 7.639162 AACGCTCTTATATTATGGAACGAAG 57.361 36.000 0.00 0.00 0.00 3.79
408 445 6.978338 ACGCTCTTATATTATGGAACGAAGA 58.022 36.000 0.00 0.00 0.00 2.87
410 447 7.040617 ACGCTCTTATATTATGGAACGAAGAGA 60.041 37.037 11.81 0.00 40.44 3.10
413 450 8.178313 TCTTATATTATGGAACGAAGAGAGCA 57.822 34.615 0.00 0.00 0.00 4.26
414 451 8.300286 TCTTATATTATGGAACGAAGAGAGCAG 58.700 37.037 0.00 0.00 0.00 4.24
426 2816 6.276847 ACGAAGAGAGCAGATAGTTAATTGG 58.723 40.000 0.00 0.00 0.00 3.16
427 2817 5.176590 CGAAGAGAGCAGATAGTTAATTGGC 59.823 44.000 0.00 0.00 0.00 4.52
429 2819 4.410228 AGAGAGCAGATAGTTAATTGGCCA 59.590 41.667 0.00 0.00 0.00 5.36
444 2834 2.524306 TGGCCAGTTATTTGGTGGAAG 58.476 47.619 0.00 0.00 40.49 3.46
454 2844 0.035739 TTGGTGGAAGGGTTACGCTC 59.964 55.000 1.61 0.00 0.00 5.03
472 2862 2.083774 CTCACAAGCTATTTGGCGGAA 58.916 47.619 0.00 0.00 41.25 4.30
477 2867 0.107165 AGCTATTTGGCGGAAGGGTC 60.107 55.000 0.00 0.00 37.29 4.46
479 2869 0.107848 CTATTTGGCGGAAGGGTCGT 60.108 55.000 0.00 0.00 0.00 4.34
487 2877 1.386533 CGGAAGGGTCGTAGCTCTTA 58.613 55.000 0.00 0.00 0.00 2.10
501 2891 7.061557 GTCGTAGCTCTTACAAAGTTATTTCGT 59.938 37.037 0.00 0.00 32.27 3.85
505 2895 6.708949 AGCTCTTACAAAGTTATTTCGTGGAA 59.291 34.615 0.00 0.00 0.00 3.53
533 2923 3.258971 AGGTTGCAGCTATCTCAAGTC 57.741 47.619 0.00 0.00 0.00 3.01
557 2947 7.747799 GTCAGAAATCATCATTGTATATTGCGG 59.252 37.037 0.00 0.00 0.00 5.69
563 2953 3.146066 TCATTGTATATTGCGGAAGGCC 58.854 45.455 0.00 0.00 42.61 5.19
591 2981 3.552273 CGAGGTATAAGGTTGGATGGTCG 60.552 52.174 0.00 0.00 0.00 4.79
597 2987 0.991920 AGGTTGGATGGTCGGTTCAT 59.008 50.000 0.00 0.00 0.00 2.57
598 2988 1.065418 AGGTTGGATGGTCGGTTCATC 60.065 52.381 0.00 0.00 40.02 2.92
599 2989 1.006832 GTTGGATGGTCGGTTCATCG 58.993 55.000 0.00 0.00 41.24 3.84
600 2990 0.611200 TTGGATGGTCGGTTCATCGT 59.389 50.000 0.00 0.00 41.24 3.73
601 2991 1.476477 TGGATGGTCGGTTCATCGTA 58.524 50.000 0.00 0.00 41.24 3.43
611 3002 2.359848 CGGTTCATCGTATGGGTCTACA 59.640 50.000 0.00 0.00 0.00 2.74
616 3007 5.607939 TCATCGTATGGGTCTACAAACAT 57.392 39.130 0.00 0.00 0.00 2.71
617 3008 5.356426 TCATCGTATGGGTCTACAAACATG 58.644 41.667 0.00 0.00 0.00 3.21
633 3024 3.021269 ACATGTTCGCAGACGTTTAGA 57.979 42.857 0.00 0.00 41.18 2.10
640 3031 4.959596 TCGCAGACGTTTAGAGTATCTT 57.040 40.909 0.00 0.00 41.72 2.40
641 3032 5.306532 TCGCAGACGTTTAGAGTATCTTT 57.693 39.130 0.00 0.00 41.72 2.52
749 3143 9.265938 CACTAACGTGCAATATGAATAATATGC 57.734 33.333 0.00 0.00 33.82 3.14
780 3174 1.337703 GTTGAGAAGTTGGCATGCACA 59.662 47.619 21.36 12.37 0.00 4.57
784 3178 0.242017 GAAGTTGGCATGCACAGTCC 59.758 55.000 21.36 0.64 0.00 3.85
785 3179 1.518056 AAGTTGGCATGCACAGTCCG 61.518 55.000 21.36 0.00 0.00 4.79
786 3180 2.672651 TTGGCATGCACAGTCCGG 60.673 61.111 21.36 0.00 0.00 5.14
818 3212 8.450578 TGGAAATTAATATGTTCTAGCAGTGG 57.549 34.615 0.00 0.00 0.00 4.00
820 3214 8.778358 GGAAATTAATATGTTCTAGCAGTGGAG 58.222 37.037 0.00 0.00 0.00 3.86
821 3215 9.331282 GAAATTAATATGTTCTAGCAGTGGAGT 57.669 33.333 0.00 0.00 0.00 3.85
823 3217 5.939764 AATATGTTCTAGCAGTGGAGTGA 57.060 39.130 0.00 0.00 0.00 3.41
825 3219 3.599730 TGTTCTAGCAGTGGAGTGATG 57.400 47.619 0.00 0.00 0.00 3.07
831 3225 0.319900 GCAGTGGAGTGATGTGACGT 60.320 55.000 0.00 0.00 0.00 4.34
834 3228 2.476619 CAGTGGAGTGATGTGACGTTTC 59.523 50.000 0.00 0.00 0.00 2.78
843 3237 3.566322 TGATGTGACGTTTCCCGAAAATT 59.434 39.130 0.00 0.00 40.70 1.82
846 3240 3.377485 TGTGACGTTTCCCGAAAATTTCA 59.623 39.130 6.53 0.00 40.70 2.69
865 3259 0.391597 ACACCAGTACAGTTCCGTGG 59.608 55.000 0.00 0.00 0.00 4.94
869 3263 1.604693 CCAGTACAGTTCCGTGGACAC 60.605 57.143 0.00 0.00 33.15 3.67
907 3301 4.532834 ACTACCCAACAACATGAGTTTGT 58.467 39.130 0.00 0.00 35.28 2.83
909 3303 2.430332 ACCCAACAACATGAGTTTGTGG 59.570 45.455 0.00 6.91 38.20 4.17
913 3307 4.578516 CCAACAACATGAGTTTGTGGTCTA 59.421 41.667 0.00 0.00 32.49 2.59
917 3311 6.299141 ACAACATGAGTTTGTGGTCTAATCT 58.701 36.000 0.00 0.00 35.28 2.40
927 3321 5.016051 TGTGGTCTAATCTCAAGCATCTC 57.984 43.478 0.00 0.00 0.00 2.75
964 3359 5.596845 TGGAAACAATTGCTTAACTTCCAC 58.403 37.500 5.05 0.00 36.74 4.02
969 3364 9.774742 GAAACAATTGCTTAACTTCCACTATAG 57.225 33.333 5.05 0.00 0.00 1.31
1021 3416 0.173481 GACACTCATAGCTGCCGTCA 59.827 55.000 0.00 0.00 0.00 4.35
1042 3437 3.883830 TCACAAAAGTTGCACAATGGT 57.116 38.095 0.00 0.00 0.00 3.55
1063 3458 2.459442 GCCGCTGCACATGAGTCTC 61.459 63.158 0.00 0.00 37.47 3.36
1068 3463 1.626747 CTGCACATGAGTCTCTGACG 58.373 55.000 0.00 0.00 37.67 4.35
1070 3465 1.080995 GCACATGAGTCTCTGACGCC 61.081 60.000 0.00 0.00 37.67 5.68
1076 3471 1.608717 GAGTCTCTGACGCCACCCAT 61.609 60.000 0.00 0.00 37.67 4.00
1090 3485 2.426522 CACCCATTGCTATATGTCCCG 58.573 52.381 0.00 0.00 0.00 5.14
1104 3499 0.662085 GTCCCGTCCATCTACTCGTC 59.338 60.000 0.00 0.00 0.00 4.20
1107 3502 0.027716 CCGTCCATCTACTCGTCGTG 59.972 60.000 0.00 0.00 0.00 4.35
1121 3519 1.139734 TCGTGGCTCTTCTGATCGC 59.860 57.895 0.00 0.00 0.00 4.58
1146 3544 0.249398 CTACCGCCTACCTTGCACTT 59.751 55.000 0.00 0.00 0.00 3.16
1147 3545 0.036765 TACCGCCTACCTTGCACTTG 60.037 55.000 0.00 0.00 0.00 3.16
1152 3550 0.400213 CCTACCTTGCACTTGGTCCA 59.600 55.000 8.30 0.00 37.74 4.02
1326 3724 0.027586 GCGATCAAACATACGTGCCC 59.972 55.000 0.00 0.00 0.00 5.36
1403 3801 2.746362 CAGAGTTGATTGTCTTCCCAGC 59.254 50.000 0.00 0.00 0.00 4.85
1408 3806 1.554617 TGATTGTCTTCCCAGCGATCA 59.445 47.619 0.00 0.00 0.00 2.92
1429 3827 1.691196 TGACCTTTTGGCCAAGACAG 58.309 50.000 19.48 15.27 45.59 3.51
1483 3881 4.099266 TCACCAACTGCAGTTTATTTTGCT 59.901 37.500 29.23 2.31 40.87 3.91
1503 3901 2.630098 CTCGGTACCATCCATCAGTGAT 59.370 50.000 13.54 0.00 0.00 3.06
1541 3939 2.290260 ACAAATTGCGAGGTGATCTCCA 60.290 45.455 15.93 0.00 39.30 3.86
1671 4069 0.174389 CGGAGATCATAGGGCCATCG 59.826 60.000 6.18 0.00 0.00 3.84
1717 4115 5.067674 TCCATGTTGTTGGCTAATATCTTGC 59.932 40.000 0.00 0.00 36.66 4.01
1761 4159 6.459923 CAAGCTTTTGTCTACTTCTAGGTCT 58.540 40.000 0.00 0.00 0.00 3.85
1816 4214 6.085573 CGAACAATCACAGCATCAAACAATA 58.914 36.000 0.00 0.00 0.00 1.90
1842 4240 3.383505 CCTATCGGTGTGTGTATCAGGAA 59.616 47.826 0.00 0.00 0.00 3.36
1957 4355 0.454600 TCTCGTCTTACCGGCATCAC 59.545 55.000 0.00 0.00 0.00 3.06
1962 4360 0.175760 TCTTACCGGCATCACAGCTC 59.824 55.000 0.00 0.00 34.17 4.09
1974 4372 4.216257 GCATCACAGCTCCTCAAGTTTTTA 59.784 41.667 0.00 0.00 0.00 1.52
1989 4387 8.825667 TCAAGTTTTTATTTTTCTACATGGCC 57.174 30.769 0.00 0.00 0.00 5.36
2097 4495 1.645034 CAGCGGTTATCACCTCAGTG 58.355 55.000 0.00 0.00 46.00 3.66
2243 4641 2.031870 GAAGAAAGGCAACAGGGTGTT 58.968 47.619 0.00 0.00 42.08 3.32
2269 4667 3.448093 TTGGATTTGGTGCAGGATACA 57.552 42.857 0.00 0.00 41.41 2.29
2338 4736 2.125106 GACCCTGGGCTAACTGCG 60.125 66.667 14.08 0.00 44.05 5.18
2423 4821 7.427214 CATTTACTACTACTAGAAGACAGGGC 58.573 42.308 0.00 0.00 0.00 5.19
2424 4822 3.543665 ACTACTACTAGAAGACAGGGCG 58.456 50.000 0.00 0.00 0.00 6.13
2426 4824 1.284198 ACTACTAGAAGACAGGGCGGA 59.716 52.381 0.00 0.00 0.00 5.54
2427 4825 2.091775 ACTACTAGAAGACAGGGCGGAT 60.092 50.000 0.00 0.00 0.00 4.18
2428 4826 2.750141 ACTAGAAGACAGGGCGGATA 57.250 50.000 0.00 0.00 0.00 2.59
2433 4832 3.845860 AGAAGACAGGGCGGATATAGAA 58.154 45.455 0.00 0.00 0.00 2.10
2476 4875 6.408092 CCTGATGCACTACTTTCCTATGGTTA 60.408 42.308 0.00 0.00 0.00 2.85
2643 5046 4.085733 ACATTATAAGTTTGCCAGTGCCA 58.914 39.130 0.00 0.00 36.33 4.92
2653 5056 1.002201 TGCCAGTGCCAATGATTTTGG 59.998 47.619 0.00 0.00 42.37 3.28
2761 5164 8.414778 GCACATTACCTTCTAGTACATTCTAGT 58.585 37.037 0.00 0.00 38.66 2.57
2848 5251 3.508793 AGTCAGTGCATTGATTCCCAAAG 59.491 43.478 15.51 0.00 38.43 2.77
2853 5256 5.021458 AGTGCATTGATTCCCAAAGAAGAT 58.979 37.500 0.00 0.00 38.07 2.40
2863 5266 8.772250 TGATTCCCAAAGAAGATAACTAGTGAT 58.228 33.333 0.00 0.00 38.07 3.06
2872 5275 7.560368 AGAAGATAACTAGTGATGGGAAGTTG 58.440 38.462 0.00 0.00 0.00 3.16
2882 5285 3.181423 TGATGGGAAGTTGCTAAAACCCT 60.181 43.478 0.00 0.00 38.28 4.34
2948 5351 6.840780 AAAAATTCTTGGTCCCATACTGAG 57.159 37.500 0.00 0.00 0.00 3.35
2949 5352 5.779241 AAATTCTTGGTCCCATACTGAGA 57.221 39.130 0.00 0.00 0.00 3.27
2953 5356 3.011821 TCTTGGTCCCATACTGAGAGAGT 59.988 47.826 0.00 0.00 38.88 3.24
2957 5360 3.886505 GGTCCCATACTGAGAGAGTACAG 59.113 52.174 0.00 0.00 40.09 2.74
2972 5375 7.531317 AGAGAGTACAGATGGATACCACTAAT 58.469 38.462 0.00 0.00 35.80 1.73
3014 6276 4.320870 TCGGGGTTCTATTTGACAAGTTC 58.679 43.478 0.00 0.00 0.00 3.01
3028 6290 1.266175 CAAGTTCAGAGCAAGGCAGTG 59.734 52.381 0.00 0.00 0.00 3.66
3047 6309 0.890996 GAGCAACACCCAAGGACCAG 60.891 60.000 0.00 0.00 0.00 4.00
3048 6310 2.564721 GCAACACCCAAGGACCAGC 61.565 63.158 0.00 0.00 0.00 4.85
3053 6996 2.046892 CCCAAGGACCAGCGAGTG 60.047 66.667 0.00 0.00 0.00 3.51
3080 7023 2.666895 CGCTAGCATGTCTACGGATCTG 60.667 54.545 16.45 0.00 0.00 2.90
3082 7025 1.043816 AGCATGTCTACGGATCTGGG 58.956 55.000 6.47 0.00 0.00 4.45
3083 7026 0.601311 GCATGTCTACGGATCTGGGC 60.601 60.000 6.47 0.00 0.00 5.36
3086 7029 2.125961 GTCTACGGATCTGGGCGGT 61.126 63.158 6.47 0.00 0.00 5.68
3087 7030 1.826921 TCTACGGATCTGGGCGGTC 60.827 63.158 6.47 0.00 0.00 4.79
3110 7053 1.236628 GCGAGATCCGAGGTTAGCTA 58.763 55.000 7.64 0.00 41.76 3.32
3115 7058 2.029623 GATCCGAGGTTAGCTACACCA 58.970 52.381 20.32 6.60 36.67 4.17
3116 7059 1.180029 TCCGAGGTTAGCTACACCAC 58.820 55.000 20.32 15.35 36.67 4.16
3117 7060 0.892755 CCGAGGTTAGCTACACCACA 59.107 55.000 20.32 0.00 36.67 4.17
3168 7111 4.597507 ACTGGGAAGTAAGGAGACATTTGA 59.402 41.667 0.00 0.00 0.00 2.69
3169 7112 5.251700 ACTGGGAAGTAAGGAGACATTTGAT 59.748 40.000 0.00 0.00 0.00 2.57
3170 7113 5.500234 TGGGAAGTAAGGAGACATTTGATG 58.500 41.667 0.00 0.00 0.00 3.07
3171 7114 5.250543 TGGGAAGTAAGGAGACATTTGATGA 59.749 40.000 0.00 0.00 0.00 2.92
3172 7115 5.819901 GGGAAGTAAGGAGACATTTGATGAG 59.180 44.000 0.00 0.00 0.00 2.90
3173 7116 6.352222 GGGAAGTAAGGAGACATTTGATGAGA 60.352 42.308 0.00 0.00 0.00 3.27
3174 7117 6.760770 GGAAGTAAGGAGACATTTGATGAGAG 59.239 42.308 0.00 0.00 0.00 3.20
3175 7118 6.865834 AGTAAGGAGACATTTGATGAGAGT 57.134 37.500 0.00 0.00 0.00 3.24
3176 7119 6.638610 AGTAAGGAGACATTTGATGAGAGTG 58.361 40.000 0.00 0.00 0.00 3.51
3177 7120 4.484537 AGGAGACATTTGATGAGAGTGG 57.515 45.455 0.00 0.00 0.00 4.00
3178 7121 2.941720 GGAGACATTTGATGAGAGTGGC 59.058 50.000 0.00 0.00 0.00 5.01
3179 7122 2.606725 GAGACATTTGATGAGAGTGGCG 59.393 50.000 0.00 0.00 0.00 5.69
3180 7123 2.234661 AGACATTTGATGAGAGTGGCGA 59.765 45.455 0.00 0.00 0.00 5.54
3181 7124 3.118482 AGACATTTGATGAGAGTGGCGAT 60.118 43.478 0.00 0.00 0.00 4.58
3182 7125 4.100035 AGACATTTGATGAGAGTGGCGATA 59.900 41.667 0.00 0.00 0.00 2.92
3183 7126 4.375272 ACATTTGATGAGAGTGGCGATAG 58.625 43.478 0.00 0.00 0.00 2.08
3184 7127 4.100035 ACATTTGATGAGAGTGGCGATAGA 59.900 41.667 0.00 0.00 39.76 1.98
3185 7128 3.998099 TTGATGAGAGTGGCGATAGAG 57.002 47.619 0.00 0.00 39.76 2.43
3186 7129 1.611006 TGATGAGAGTGGCGATAGAGC 59.389 52.381 0.00 0.00 39.76 4.09
3187 7130 0.595588 ATGAGAGTGGCGATAGAGCG 59.404 55.000 0.00 0.00 38.18 5.03
3188 7131 1.284408 GAGAGTGGCGATAGAGCGG 59.716 63.158 0.00 0.00 38.18 5.52
3189 7132 1.152943 AGAGTGGCGATAGAGCGGA 60.153 57.895 0.00 0.00 38.18 5.54
3190 7133 1.008309 GAGTGGCGATAGAGCGGAC 60.008 63.158 0.00 0.00 38.18 4.79
3191 7134 2.353607 GTGGCGATAGAGCGGACG 60.354 66.667 0.00 0.00 38.18 4.79
3192 7135 2.515290 TGGCGATAGAGCGGACGA 60.515 61.111 0.00 0.00 38.18 4.20
3193 7136 2.252855 GGCGATAGAGCGGACGAG 59.747 66.667 0.00 0.00 38.18 4.18
3194 7137 2.427740 GCGATAGAGCGGACGAGC 60.428 66.667 0.00 0.00 39.76 5.03
3209 7152 3.704207 AGCTCGCTTGCTCCTGCT 61.704 61.111 0.00 0.00 39.34 4.24
3210 7153 2.185350 GCTCGCTTGCTCCTGCTA 59.815 61.111 0.00 0.00 40.48 3.49
3211 7154 1.882167 GCTCGCTTGCTCCTGCTAG 60.882 63.158 0.00 0.00 43.20 3.42
3212 7155 1.227205 CTCGCTTGCTCCTGCTAGG 60.227 63.158 0.00 0.00 41.23 3.02
3213 7156 1.954362 CTCGCTTGCTCCTGCTAGGT 61.954 60.000 0.00 0.00 41.23 3.08
3214 7157 1.812922 CGCTTGCTCCTGCTAGGTG 60.813 63.158 0.00 1.99 41.23 4.00
3215 7158 1.451028 GCTTGCTCCTGCTAGGTGG 60.451 63.158 0.00 0.00 41.23 4.61
3216 7159 1.903877 GCTTGCTCCTGCTAGGTGGA 61.904 60.000 0.00 0.00 41.23 4.02
3217 7160 0.107945 CTTGCTCCTGCTAGGTGGAC 60.108 60.000 0.00 0.00 38.16 4.02
3218 7161 1.888436 TTGCTCCTGCTAGGTGGACG 61.888 60.000 0.00 0.00 40.48 4.79
3219 7162 2.052690 GCTCCTGCTAGGTGGACGA 61.053 63.158 0.00 0.00 36.53 4.20
3220 7163 1.605058 GCTCCTGCTAGGTGGACGAA 61.605 60.000 0.00 0.00 36.53 3.85
3221 7164 1.115467 CTCCTGCTAGGTGGACGAAT 58.885 55.000 0.00 0.00 36.53 3.34
3222 7165 0.824109 TCCTGCTAGGTGGACGAATG 59.176 55.000 0.00 0.00 36.53 2.67
3223 7166 0.179073 CCTGCTAGGTGGACGAATGG 60.179 60.000 0.00 0.00 0.00 3.16
3224 7167 0.824109 CTGCTAGGTGGACGAATGGA 59.176 55.000 0.00 0.00 0.00 3.41
3225 7168 1.207089 CTGCTAGGTGGACGAATGGAA 59.793 52.381 0.00 0.00 0.00 3.53
3226 7169 1.837439 TGCTAGGTGGACGAATGGAAT 59.163 47.619 0.00 0.00 0.00 3.01
3227 7170 3.035363 TGCTAGGTGGACGAATGGAATA 58.965 45.455 0.00 0.00 0.00 1.75
3228 7171 3.069586 TGCTAGGTGGACGAATGGAATAG 59.930 47.826 0.00 0.00 0.00 1.73
3229 7172 2.622064 AGGTGGACGAATGGAATAGC 57.378 50.000 0.00 0.00 0.00 2.97
3230 7173 1.202533 AGGTGGACGAATGGAATAGCG 60.203 52.381 0.00 0.00 0.00 4.26
3231 7174 1.472728 GGTGGACGAATGGAATAGCGT 60.473 52.381 0.00 0.00 39.62 5.07
3232 7175 1.593006 GTGGACGAATGGAATAGCGTG 59.407 52.381 0.00 0.00 37.55 5.34
3233 7176 1.478916 TGGACGAATGGAATAGCGTGA 59.521 47.619 0.00 0.00 37.55 4.35
3234 7177 2.102420 TGGACGAATGGAATAGCGTGAT 59.898 45.455 0.00 0.00 37.55 3.06
3235 7178 2.476619 GGACGAATGGAATAGCGTGATG 59.523 50.000 0.00 0.00 37.55 3.07
3236 7179 3.123804 GACGAATGGAATAGCGTGATGT 58.876 45.455 0.00 0.00 37.55 3.06
3237 7180 3.531538 ACGAATGGAATAGCGTGATGTT 58.468 40.909 0.00 0.00 36.36 2.71
3238 7181 3.309682 ACGAATGGAATAGCGTGATGTTG 59.690 43.478 0.00 0.00 36.36 3.33
3239 7182 3.303329 CGAATGGAATAGCGTGATGTTGG 60.303 47.826 0.00 0.00 0.00 3.77
3240 7183 3.558931 ATGGAATAGCGTGATGTTGGA 57.441 42.857 0.00 0.00 0.00 3.53
3241 7184 2.905075 TGGAATAGCGTGATGTTGGAG 58.095 47.619 0.00 0.00 0.00 3.86
3242 7185 1.599542 GGAATAGCGTGATGTTGGAGC 59.400 52.381 0.00 0.00 0.00 4.70
3243 7186 2.555199 GAATAGCGTGATGTTGGAGCT 58.445 47.619 0.00 0.00 41.45 4.09
3244 7187 1.945387 ATAGCGTGATGTTGGAGCTG 58.055 50.000 0.00 0.00 38.73 4.24
3245 7188 0.108186 TAGCGTGATGTTGGAGCTGG 60.108 55.000 0.00 0.00 38.73 4.85
3246 7189 3.044059 GCGTGATGTTGGAGCTGGC 62.044 63.158 0.00 0.00 0.00 4.85
3247 7190 1.672030 CGTGATGTTGGAGCTGGCA 60.672 57.895 0.00 0.00 0.00 4.92
3248 7191 1.028330 CGTGATGTTGGAGCTGGCAT 61.028 55.000 0.00 0.00 0.00 4.40
3249 7192 1.180029 GTGATGTTGGAGCTGGCATT 58.820 50.000 0.00 0.00 0.00 3.56
3250 7193 1.133790 GTGATGTTGGAGCTGGCATTC 59.866 52.381 0.00 0.00 0.00 2.67
3251 7194 1.272037 TGATGTTGGAGCTGGCATTCA 60.272 47.619 0.00 0.00 0.00 2.57
3252 7195 1.404391 GATGTTGGAGCTGGCATTCAG 59.596 52.381 0.00 0.00 46.03 3.02
3253 7196 0.111061 TGTTGGAGCTGGCATTCAGT 59.889 50.000 0.00 0.00 45.08 3.41
3254 7197 0.524862 GTTGGAGCTGGCATTCAGTG 59.475 55.000 0.00 0.00 45.08 3.66
3266 7209 3.358707 CATTCAGTGCTTGCAGAAACA 57.641 42.857 0.00 0.00 0.00 2.83
3267 7210 2.849880 TTCAGTGCTTGCAGAAACAC 57.150 45.000 0.00 0.00 0.00 3.32
3268 7211 1.748950 TCAGTGCTTGCAGAAACACA 58.251 45.000 11.44 0.00 35.47 3.72
3269 7212 1.672363 TCAGTGCTTGCAGAAACACAG 59.328 47.619 11.44 5.34 35.47 3.66
3270 7213 1.027357 AGTGCTTGCAGAAACACAGG 58.973 50.000 11.44 0.00 35.47 4.00
3271 7214 0.740737 GTGCTTGCAGAAACACAGGT 59.259 50.000 0.00 0.00 33.23 4.00
3272 7215 0.740149 TGCTTGCAGAAACACAGGTG 59.260 50.000 0.00 0.00 0.00 4.00
3273 7216 1.024271 GCTTGCAGAAACACAGGTGA 58.976 50.000 6.40 0.00 0.00 4.02
3274 7217 1.002033 GCTTGCAGAAACACAGGTGAG 60.002 52.381 6.40 0.00 0.00 3.51
3275 7218 2.292267 CTTGCAGAAACACAGGTGAGT 58.708 47.619 6.40 0.00 0.00 3.41
3276 7219 2.418368 TGCAGAAACACAGGTGAGTT 57.582 45.000 6.40 0.00 0.00 3.01
3277 7220 2.722094 TGCAGAAACACAGGTGAGTTT 58.278 42.857 6.40 5.37 40.55 2.66
3278 7221 2.423185 TGCAGAAACACAGGTGAGTTTG 59.577 45.455 9.82 0.16 38.57 2.93
3279 7222 2.796032 GCAGAAACACAGGTGAGTTTGC 60.796 50.000 9.82 5.90 38.57 3.68
3280 7223 1.670811 AGAAACACAGGTGAGTTTGCG 59.329 47.619 9.82 0.00 38.57 4.85
3281 7224 0.100503 AAACACAGGTGAGTTTGCGC 59.899 50.000 0.00 0.00 37.42 6.09
3282 7225 1.029408 AACACAGGTGAGTTTGCGCA 61.029 50.000 5.66 5.66 0.00 6.09
3283 7226 1.280746 CACAGGTGAGTTTGCGCAG 59.719 57.895 11.31 0.00 0.00 5.18
3284 7227 1.893808 ACAGGTGAGTTTGCGCAGG 60.894 57.895 11.31 0.00 0.00 4.85
3285 7228 2.281761 AGGTGAGTTTGCGCAGGG 60.282 61.111 11.31 0.00 0.00 4.45
3286 7229 2.281484 GGTGAGTTTGCGCAGGGA 60.281 61.111 11.31 0.00 0.00 4.20
3287 7230 1.896660 GGTGAGTTTGCGCAGGGAA 60.897 57.895 11.31 0.00 0.00 3.97
3288 7231 1.452145 GGTGAGTTTGCGCAGGGAAA 61.452 55.000 11.31 0.00 0.00 3.13
3289 7232 0.383949 GTGAGTTTGCGCAGGGAAAA 59.616 50.000 11.31 0.00 35.13 2.29
3290 7233 0.667993 TGAGTTTGCGCAGGGAAAAG 59.332 50.000 11.31 0.00 35.13 2.27
3291 7234 0.039165 GAGTTTGCGCAGGGAAAAGG 60.039 55.000 11.31 0.00 35.13 3.11
3292 7235 0.755327 AGTTTGCGCAGGGAAAAGGT 60.755 50.000 11.31 0.00 35.13 3.50
3293 7236 0.955905 GTTTGCGCAGGGAAAAGGTA 59.044 50.000 11.31 0.00 35.13 3.08
3294 7237 0.955905 TTTGCGCAGGGAAAAGGTAC 59.044 50.000 11.31 0.00 29.93 3.34
3295 7238 1.231958 TTGCGCAGGGAAAAGGTACG 61.232 55.000 11.31 0.00 0.00 3.67
3296 7239 3.035576 GCGCAGGGAAAAGGTACGC 62.036 63.158 0.30 0.00 37.93 4.42
3297 7240 1.669760 CGCAGGGAAAAGGTACGCA 60.670 57.895 0.00 0.00 0.00 5.24
3298 7241 1.024579 CGCAGGGAAAAGGTACGCAT 61.025 55.000 0.00 0.00 0.00 4.73
3299 7242 0.451783 GCAGGGAAAAGGTACGCATG 59.548 55.000 0.00 0.00 0.00 4.06
3300 7243 1.821216 CAGGGAAAAGGTACGCATGT 58.179 50.000 0.00 0.00 0.00 3.21
3301 7244 1.468520 CAGGGAAAAGGTACGCATGTG 59.531 52.381 4.30 4.30 0.00 3.21
3302 7245 0.808755 GGGAAAAGGTACGCATGTGG 59.191 55.000 11.65 0.00 0.00 4.17
3303 7246 1.612199 GGGAAAAGGTACGCATGTGGA 60.612 52.381 11.65 0.00 0.00 4.02
3304 7247 1.467342 GGAAAAGGTACGCATGTGGAC 59.533 52.381 13.53 13.53 0.00 4.02
3305 7248 1.127951 GAAAAGGTACGCATGTGGACG 59.872 52.381 15.34 2.13 0.00 4.79
3306 7249 0.034337 AAAGGTACGCATGTGGACGT 59.966 50.000 15.34 13.20 45.85 4.34
3307 7250 0.669318 AAGGTACGCATGTGGACGTG 60.669 55.000 17.09 0.00 43.44 4.49
3308 7251 2.098233 GGTACGCATGTGGACGTGG 61.098 63.158 15.34 0.00 43.44 4.94
3310 7253 3.943479 TACGCATGTGGACGTGGGC 62.943 63.158 11.65 0.00 46.05 5.36
3313 7256 2.747460 CATGTGGACGTGGGCCAG 60.747 66.667 6.40 3.61 35.77 4.85
3314 7257 3.249189 ATGTGGACGTGGGCCAGT 61.249 61.111 6.40 7.50 35.77 4.00
3315 7258 1.916273 ATGTGGACGTGGGCCAGTA 60.916 57.895 6.40 0.00 35.77 2.74
3316 7259 2.047560 GTGGACGTGGGCCAGTAC 60.048 66.667 6.40 9.04 35.77 2.73
3317 7260 3.687102 TGGACGTGGGCCAGTACG 61.687 66.667 20.40 20.40 45.19 3.67
3318 7261 3.376078 GGACGTGGGCCAGTACGA 61.376 66.667 26.36 0.00 42.54 3.43
3319 7262 2.718073 GGACGTGGGCCAGTACGAT 61.718 63.158 26.36 14.27 42.54 3.73
3320 7263 1.518572 GACGTGGGCCAGTACGATG 60.519 63.158 26.36 0.00 42.54 3.84
3321 7264 1.940883 GACGTGGGCCAGTACGATGA 61.941 60.000 26.36 0.00 42.54 2.92
3322 7265 1.216977 CGTGGGCCAGTACGATGAA 59.783 57.895 18.13 0.00 42.54 2.57
3323 7266 0.390603 CGTGGGCCAGTACGATGAAA 60.391 55.000 18.13 0.00 42.54 2.69
3324 7267 1.742411 CGTGGGCCAGTACGATGAAAT 60.742 52.381 18.13 0.00 42.54 2.17
3325 7268 2.482316 CGTGGGCCAGTACGATGAAATA 60.482 50.000 18.13 0.00 42.54 1.40
3326 7269 3.537580 GTGGGCCAGTACGATGAAATAA 58.462 45.455 6.40 0.00 0.00 1.40
3327 7270 3.311596 GTGGGCCAGTACGATGAAATAAC 59.688 47.826 6.40 0.00 0.00 1.89
3328 7271 2.542595 GGGCCAGTACGATGAAATAACG 59.457 50.000 4.39 0.00 0.00 3.18
3329 7272 3.450578 GGCCAGTACGATGAAATAACGA 58.549 45.455 0.00 0.00 0.00 3.85
3330 7273 3.244579 GGCCAGTACGATGAAATAACGAC 59.755 47.826 0.00 0.00 0.00 4.34
3331 7274 3.061403 GCCAGTACGATGAAATAACGACG 60.061 47.826 0.00 0.00 0.00 5.12
3332 7275 4.100529 CCAGTACGATGAAATAACGACGT 58.899 43.478 0.00 0.00 37.68 4.34
3333 7276 4.027945 CCAGTACGATGAAATAACGACGTG 60.028 45.833 0.00 0.00 35.66 4.49
3334 7277 4.027945 CAGTACGATGAAATAACGACGTGG 60.028 45.833 0.00 0.00 35.66 4.94
3335 7278 2.264813 ACGATGAAATAACGACGTGGG 58.735 47.619 0.00 0.00 32.93 4.61
3336 7279 2.264813 CGATGAAATAACGACGTGGGT 58.735 47.619 0.00 0.00 0.00 4.51
3337 7280 2.028763 CGATGAAATAACGACGTGGGTG 59.971 50.000 0.00 0.00 0.00 4.61
3338 7281 1.798283 TGAAATAACGACGTGGGTGG 58.202 50.000 0.00 0.00 0.00 4.61
3339 7282 1.081094 GAAATAACGACGTGGGTGGG 58.919 55.000 0.00 0.00 0.00 4.61
3340 7283 0.397564 AAATAACGACGTGGGTGGGT 59.602 50.000 0.00 0.00 0.00 4.51
3341 7284 0.320946 AATAACGACGTGGGTGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
3342 7285 2.791501 ATAACGACGTGGGTGGGTGC 62.792 60.000 0.00 0.00 0.00 5.01
3345 7288 4.250305 GACGTGGGTGGGTGCAGT 62.250 66.667 0.00 0.00 0.00 4.40
3346 7289 2.845317 ACGTGGGTGGGTGCAGTA 60.845 61.111 0.00 0.00 0.00 2.74
3347 7290 2.386064 GACGTGGGTGGGTGCAGTAA 62.386 60.000 0.00 0.00 0.00 2.24
3348 7291 1.964373 CGTGGGTGGGTGCAGTAAC 60.964 63.158 0.00 0.00 0.00 2.50
3349 7292 1.964373 GTGGGTGGGTGCAGTAACG 60.964 63.158 0.00 0.00 0.00 3.18
3350 7293 2.359478 GGGTGGGTGCAGTAACGG 60.359 66.667 0.00 0.00 0.00 4.44
3351 7294 2.745037 GGTGGGTGCAGTAACGGA 59.255 61.111 0.00 0.00 0.00 4.69
3352 7295 1.375523 GGTGGGTGCAGTAACGGAG 60.376 63.158 0.00 0.00 0.00 4.63
3353 7296 1.669440 GTGGGTGCAGTAACGGAGA 59.331 57.895 0.00 0.00 0.00 3.71
3354 7297 0.389948 GTGGGTGCAGTAACGGAGAG 60.390 60.000 0.00 0.00 0.00 3.20
3355 7298 1.448013 GGGTGCAGTAACGGAGAGC 60.448 63.158 0.00 0.00 0.00 4.09
3356 7299 1.592223 GGTGCAGTAACGGAGAGCT 59.408 57.895 0.00 0.00 0.00 4.09
3357 7300 0.815734 GGTGCAGTAACGGAGAGCTA 59.184 55.000 0.00 0.00 0.00 3.32
3358 7301 1.203994 GGTGCAGTAACGGAGAGCTAA 59.796 52.381 0.00 0.00 0.00 3.09
3359 7302 2.260481 GTGCAGTAACGGAGAGCTAAC 58.740 52.381 0.00 0.00 0.00 2.34
3360 7303 1.135489 TGCAGTAACGGAGAGCTAACG 60.135 52.381 0.00 0.00 0.00 3.18
3361 7304 1.131883 GCAGTAACGGAGAGCTAACGA 59.868 52.381 10.62 0.00 0.00 3.85
3362 7305 2.223525 GCAGTAACGGAGAGCTAACGAT 60.224 50.000 10.62 2.30 0.00 3.73
3363 7306 3.364062 CAGTAACGGAGAGCTAACGATG 58.636 50.000 10.62 1.77 0.00 3.84
3364 7307 2.117910 GTAACGGAGAGCTAACGATGC 58.882 52.381 10.62 0.00 0.00 3.91
3365 7308 0.179108 AACGGAGAGCTAACGATGCC 60.179 55.000 10.62 0.00 0.00 4.40
3366 7309 1.658717 CGGAGAGCTAACGATGCCG 60.659 63.158 0.00 0.00 42.50 5.69
3376 7319 2.655364 CGATGCCGTCGCTACAGG 60.655 66.667 0.00 0.00 44.33 4.00
3377 7320 2.805546 GATGCCGTCGCTACAGGA 59.194 61.111 3.97 0.00 35.36 3.86
3378 7321 1.364171 GATGCCGTCGCTACAGGAT 59.636 57.895 3.97 0.00 35.36 3.24
3379 7322 0.941463 GATGCCGTCGCTACAGGATG 60.941 60.000 3.97 0.00 37.92 3.51
3380 7323 1.391933 ATGCCGTCGCTACAGGATGA 61.392 55.000 3.97 0.00 35.93 2.92
3381 7324 1.141019 GCCGTCGCTACAGGATGAA 59.859 57.895 3.97 0.00 39.69 2.57
3382 7325 0.872021 GCCGTCGCTACAGGATGAAG 60.872 60.000 3.97 0.00 39.69 3.02
3383 7326 0.872021 CCGTCGCTACAGGATGAAGC 60.872 60.000 0.00 0.00 39.69 3.86
3384 7327 0.179137 CGTCGCTACAGGATGAAGCA 60.179 55.000 0.00 0.00 39.69 3.91
3385 7328 1.281899 GTCGCTACAGGATGAAGCAC 58.718 55.000 0.00 0.00 39.69 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.462759 CTCTCGCAAACCTCCCCATC 60.463 60.000 0.00 0.00 0.00 3.51
4 5 1.201429 ACTCTCGCAAACCTCCCCAT 61.201 55.000 0.00 0.00 0.00 4.00
5 6 1.827399 GACTCTCGCAAACCTCCCCA 61.827 60.000 0.00 0.00 0.00 4.96
6 7 1.079057 GACTCTCGCAAACCTCCCC 60.079 63.158 0.00 0.00 0.00 4.81
7 8 0.390472 CAGACTCTCGCAAACCTCCC 60.390 60.000 0.00 0.00 0.00 4.30
8 9 0.390472 CCAGACTCTCGCAAACCTCC 60.390 60.000 0.00 0.00 0.00 4.30
18 19 1.040339 AGGCGGACATCCAGACTCTC 61.040 60.000 0.00 0.00 35.14 3.20
19 20 1.000993 AGGCGGACATCCAGACTCT 59.999 57.895 0.00 0.00 35.14 3.24
27 28 2.203070 ATTGGCGAGGCGGACATC 60.203 61.111 0.00 0.00 0.00 3.06
41 42 2.030628 GGTACGTGGTGGTTTTGGATTG 60.031 50.000 0.00 0.00 0.00 2.67
42 43 2.232399 GGTACGTGGTGGTTTTGGATT 58.768 47.619 0.00 0.00 0.00 3.01
46 47 1.943293 CGGGTACGTGGTGGTTTTG 59.057 57.895 0.00 0.00 34.81 2.44
63 64 2.125753 GAGAGAGGCTGTGGCACG 60.126 66.667 13.77 9.03 40.87 5.34
74 75 1.688197 GCATGGAGGAAGAGGAGAGAG 59.312 57.143 0.00 0.00 0.00 3.20
92 93 2.762360 GACATTCCGTCATTCCGCA 58.238 52.632 0.00 0.00 44.69 5.69
101 102 3.190535 GCCAAATAACAGTGACATTCCGT 59.809 43.478 0.00 0.00 0.00 4.69
109 110 3.745799 TCTTTCCGCCAAATAACAGTGA 58.254 40.909 0.00 0.00 0.00 3.41
111 112 3.502211 CACTCTTTCCGCCAAATAACAGT 59.498 43.478 0.00 0.00 0.00 3.55
114 115 4.023536 TGTTCACTCTTTCCGCCAAATAAC 60.024 41.667 0.00 0.00 0.00 1.89
115 116 4.138290 TGTTCACTCTTTCCGCCAAATAA 58.862 39.130 0.00 0.00 0.00 1.40
123 124 5.385617 CAAATAGCTTGTTCACTCTTTCCG 58.614 41.667 0.00 0.00 0.00 4.30
173 202 8.365647 TGTTAACTTTCTACTCCCTCAGTAAAG 58.634 37.037 7.22 0.00 37.13 1.85
177 206 5.601313 TGTGTTAACTTTCTACTCCCTCAGT 59.399 40.000 7.22 0.00 39.41 3.41
178 207 5.927115 GTGTGTTAACTTTCTACTCCCTCAG 59.073 44.000 7.22 0.00 0.00 3.35
186 215 7.744715 CCGATCAATTGTGTGTTAACTTTCTAC 59.255 37.037 7.22 0.00 0.00 2.59
225 262 6.194796 ACATATTGCCACATGTTTGTAGAC 57.805 37.500 0.00 0.00 33.76 2.59
226 263 9.271828 CTATACATATTGCCACATGTTTGTAGA 57.728 33.333 0.00 0.00 36.74 2.59
228 265 9.620259 TTCTATACATATTGCCACATGTTTGTA 57.380 29.630 0.00 0.00 36.74 2.41
230 267 9.800433 TTTTCTATACATATTGCCACATGTTTG 57.200 29.630 0.00 0.00 36.74 2.93
255 292 9.661563 TTCCGTCAAATAACTGATAGTGTTATT 57.338 29.630 6.17 6.17 46.33 1.40
256 293 9.314321 CTTCCGTCAAATAACTGATAGTGTTAT 57.686 33.333 0.00 0.00 40.90 1.89
262 299 4.511826 GGCCTTCCGTCAAATAACTGATAG 59.488 45.833 0.00 0.00 0.00 2.08
263 300 4.163458 AGGCCTTCCGTCAAATAACTGATA 59.837 41.667 0.00 0.00 37.47 2.15
277 314 2.990066 AGTCATTAGAAGGCCTTCCG 57.010 50.000 36.59 24.00 40.33 4.30
283 320 6.382869 AAATGCATGTAGTCATTAGAAGGC 57.617 37.500 0.00 0.00 33.05 4.35
305 342 5.533154 TCATTAGAAGGCTTTCCGTCAAAAA 59.467 36.000 4.73 0.00 42.38 1.94
306 343 5.048991 GTCATTAGAAGGCTTTCCGTCAAAA 60.049 40.000 4.73 0.00 42.38 2.44
307 344 4.454504 GTCATTAGAAGGCTTTCCGTCAAA 59.545 41.667 4.73 0.00 42.38 2.69
308 345 4.000988 GTCATTAGAAGGCTTTCCGTCAA 58.999 43.478 4.73 0.00 42.38 3.18
309 346 3.260884 AGTCATTAGAAGGCTTTCCGTCA 59.739 43.478 4.73 0.00 42.38 4.35
310 347 3.863041 AGTCATTAGAAGGCTTTCCGTC 58.137 45.455 4.73 0.00 40.58 4.79
311 348 3.983044 AGTCATTAGAAGGCTTTCCGT 57.017 42.857 4.73 0.00 37.47 4.69
312 349 6.927294 ATTTAGTCATTAGAAGGCTTTCCG 57.073 37.500 4.73 0.00 37.47 4.30
313 350 8.732746 TGTATTTAGTCATTAGAAGGCTTTCC 57.267 34.615 4.73 0.00 33.64 3.13
325 362 9.787435 TTCCGCCTAATAATGTATTTAGTCATT 57.213 29.630 0.00 0.00 37.85 2.57
326 363 9.436957 CTTCCGCCTAATAATGTATTTAGTCAT 57.563 33.333 0.00 0.00 0.00 3.06
327 364 7.876068 CCTTCCGCCTAATAATGTATTTAGTCA 59.124 37.037 0.00 0.00 0.00 3.41
328 365 7.148457 GCCTTCCGCCTAATAATGTATTTAGTC 60.148 40.741 0.00 0.00 0.00 2.59
329 366 6.653740 GCCTTCCGCCTAATAATGTATTTAGT 59.346 38.462 0.00 0.00 0.00 2.24
330 367 7.073342 GCCTTCCGCCTAATAATGTATTTAG 57.927 40.000 0.00 0.00 0.00 1.85
332 369 5.959618 GCCTTCCGCCTAATAATGTATTT 57.040 39.130 0.00 0.00 0.00 1.40
346 383 2.219458 GGTTATTAGAAGGCCTTCCGC 58.781 52.381 36.59 21.18 40.33 5.54
347 384 3.553828 TGGTTATTAGAAGGCCTTCCG 57.446 47.619 36.59 0.00 40.33 4.30
380 417 8.428186 TCGTTCCATAATATAAGAGCGTTTTT 57.572 30.769 7.97 0.00 34.98 1.94
382 419 7.924412 TCTTCGTTCCATAATATAAGAGCGTTT 59.076 33.333 7.97 0.00 34.98 3.60
384 421 6.978338 TCTTCGTTCCATAATATAAGAGCGT 58.022 36.000 7.97 0.00 34.98 5.07
385 422 7.306213 TCTCTTCGTTCCATAATATAAGAGCG 58.694 38.462 0.00 3.87 38.75 5.03
386 423 7.274686 GCTCTCTTCGTTCCATAATATAAGAGC 59.725 40.741 0.00 0.00 42.57 4.09
387 424 8.300286 TGCTCTCTTCGTTCCATAATATAAGAG 58.700 37.037 0.00 0.00 39.72 2.85
388 425 8.178313 TGCTCTCTTCGTTCCATAATATAAGA 57.822 34.615 0.00 0.00 0.00 2.10
389 426 8.300286 TCTGCTCTCTTCGTTCCATAATATAAG 58.700 37.037 0.00 0.00 0.00 1.73
390 427 8.178313 TCTGCTCTCTTCGTTCCATAATATAA 57.822 34.615 0.00 0.00 0.00 0.98
391 428 7.761038 TCTGCTCTCTTCGTTCCATAATATA 57.239 36.000 0.00 0.00 0.00 0.86
392 429 6.656632 TCTGCTCTCTTCGTTCCATAATAT 57.343 37.500 0.00 0.00 0.00 1.28
393 430 6.656632 ATCTGCTCTCTTCGTTCCATAATA 57.343 37.500 0.00 0.00 0.00 0.98
395 432 5.594725 ACTATCTGCTCTCTTCGTTCCATAA 59.405 40.000 0.00 0.00 0.00 1.90
396 433 5.133941 ACTATCTGCTCTCTTCGTTCCATA 58.866 41.667 0.00 0.00 0.00 2.74
397 434 3.957497 ACTATCTGCTCTCTTCGTTCCAT 59.043 43.478 0.00 0.00 0.00 3.41
398 435 3.357203 ACTATCTGCTCTCTTCGTTCCA 58.643 45.455 0.00 0.00 0.00 3.53
400 437 7.043059 CCAATTAACTATCTGCTCTCTTCGTTC 60.043 40.741 0.00 0.00 0.00 3.95
401 438 6.758886 CCAATTAACTATCTGCTCTCTTCGTT 59.241 38.462 0.00 0.00 0.00 3.85
402 439 6.276847 CCAATTAACTATCTGCTCTCTTCGT 58.723 40.000 0.00 0.00 0.00 3.85
403 440 5.176590 GCCAATTAACTATCTGCTCTCTTCG 59.823 44.000 0.00 0.00 0.00 3.79
404 441 5.468409 GGCCAATTAACTATCTGCTCTCTTC 59.532 44.000 0.00 0.00 0.00 2.87
405 442 5.104360 TGGCCAATTAACTATCTGCTCTCTT 60.104 40.000 0.61 0.00 0.00 2.85
406 443 4.410228 TGGCCAATTAACTATCTGCTCTCT 59.590 41.667 0.61 0.00 0.00 3.10
407 444 4.708177 TGGCCAATTAACTATCTGCTCTC 58.292 43.478 0.61 0.00 0.00 3.20
408 445 4.164988 ACTGGCCAATTAACTATCTGCTCT 59.835 41.667 7.01 0.00 0.00 4.09
410 447 4.510167 ACTGGCCAATTAACTATCTGCT 57.490 40.909 7.01 0.00 0.00 4.24
413 450 7.839200 ACCAAATAACTGGCCAATTAACTATCT 59.161 33.333 11.23 0.00 40.45 1.98
414 451 7.920682 CACCAAATAACTGGCCAATTAACTATC 59.079 37.037 11.23 0.00 40.45 2.08
426 2816 1.824852 CCCTTCCACCAAATAACTGGC 59.175 52.381 0.00 0.00 40.45 4.85
427 2817 3.169512 ACCCTTCCACCAAATAACTGG 57.830 47.619 0.00 0.00 42.68 4.00
429 2819 4.329392 CGTAACCCTTCCACCAAATAACT 58.671 43.478 0.00 0.00 0.00 2.24
454 2844 1.133025 CCTTCCGCCAAATAGCTTGTG 59.867 52.381 0.00 0.00 32.65 3.33
472 2862 3.163467 ACTTTGTAAGAGCTACGACCCT 58.837 45.455 0.00 0.00 32.65 4.34
477 2867 7.164858 CACGAAATAACTTTGTAAGAGCTACG 58.835 38.462 0.00 0.00 32.65 3.51
479 2869 7.380536 TCCACGAAATAACTTTGTAAGAGCTA 58.619 34.615 0.00 0.00 29.81 3.32
487 2877 6.687081 TTCACTTCCACGAAATAACTTTGT 57.313 33.333 0.00 0.00 31.13 2.83
501 2891 2.819608 GCTGCAACCTAATTCACTTCCA 59.180 45.455 0.00 0.00 0.00 3.53
505 2895 5.104776 TGAGATAGCTGCAACCTAATTCACT 60.105 40.000 1.02 0.00 0.00 3.41
533 2923 7.809665 TCCGCAATATACAATGATGATTTCTG 58.190 34.615 0.00 0.00 0.00 3.02
557 2947 2.622064 ATACCTCGAATGTGGCCTTC 57.378 50.000 3.32 0.00 31.75 3.46
563 2953 5.018539 TCCAACCTTATACCTCGAATGTG 57.981 43.478 0.00 0.00 0.00 3.21
591 2981 4.395959 TTGTAGACCCATACGATGAACC 57.604 45.455 0.00 0.00 0.00 3.62
597 2987 4.811969 ACATGTTTGTAGACCCATACGA 57.188 40.909 0.00 0.00 33.16 3.43
598 2988 4.032445 CGAACATGTTTGTAGACCCATACG 59.968 45.833 13.36 2.88 34.06 3.06
599 2989 4.201783 GCGAACATGTTTGTAGACCCATAC 60.202 45.833 23.70 2.99 34.06 2.39
600 2990 3.936453 GCGAACATGTTTGTAGACCCATA 59.064 43.478 23.70 0.00 34.06 2.74
601 2991 2.747446 GCGAACATGTTTGTAGACCCAT 59.253 45.455 23.70 0.00 34.06 4.00
611 3002 3.805422 TCTAAACGTCTGCGAACATGTTT 59.195 39.130 13.36 0.00 42.00 2.83
616 3007 2.787601 ACTCTAAACGTCTGCGAACA 57.212 45.000 0.00 0.00 42.00 3.18
617 3008 4.660105 AGATACTCTAAACGTCTGCGAAC 58.340 43.478 0.00 0.00 42.00 3.95
640 3031 2.278466 CGCCGTGTGCTGCAAAAA 60.278 55.556 2.77 0.00 38.05 1.94
641 3032 3.462333 GACGCCGTGTGCTGCAAAA 62.462 57.895 2.77 0.00 38.05 2.44
653 3044 2.622903 TTAAGGCATCTCCGACGCCG 62.623 60.000 0.00 0.00 46.26 6.46
654 3045 1.143183 TTAAGGCATCTCCGACGCC 59.857 57.895 0.00 0.00 41.64 5.68
655 3046 0.179108 AGTTAAGGCATCTCCGACGC 60.179 55.000 0.00 0.00 40.77 5.19
656 3047 2.295253 AAGTTAAGGCATCTCCGACG 57.705 50.000 0.00 0.00 40.77 5.12
657 3048 4.388378 AGTAAGTTAAGGCATCTCCGAC 57.612 45.455 0.00 0.00 40.77 4.79
658 3049 4.142004 GGAAGTAAGTTAAGGCATCTCCGA 60.142 45.833 0.00 0.00 40.77 4.55
749 3143 5.529060 GCCAACTTCTCAACCATATTCCTAG 59.471 44.000 0.00 0.00 0.00 3.02
761 3155 1.610038 CTGTGCATGCCAACTTCTCAA 59.390 47.619 16.68 0.00 0.00 3.02
764 3158 1.242076 GACTGTGCATGCCAACTTCT 58.758 50.000 16.68 0.00 0.00 2.85
780 3174 1.276622 ATTTCCAGCAGTACCGGACT 58.723 50.000 9.46 4.30 39.82 3.85
784 3178 6.861065 ACATATTAATTTCCAGCAGTACCG 57.139 37.500 0.00 0.00 0.00 4.02
785 3179 8.451908 AGAACATATTAATTTCCAGCAGTACC 57.548 34.615 0.00 0.00 0.00 3.34
798 3192 8.023021 TCACTCCACTGCTAGAACATATTAAT 57.977 34.615 0.00 0.00 0.00 1.40
804 3198 3.517100 ACATCACTCCACTGCTAGAACAT 59.483 43.478 0.00 0.00 0.00 2.71
818 3212 1.068474 CGGGAAACGTCACATCACTC 58.932 55.000 0.00 0.00 37.93 3.51
820 3214 1.504359 TTCGGGAAACGTCACATCAC 58.496 50.000 0.00 0.00 44.69 3.06
821 3215 2.242047 TTTCGGGAAACGTCACATCA 57.758 45.000 0.00 0.00 44.69 3.07
823 3217 4.036971 TGAAATTTTCGGGAAACGTCACAT 59.963 37.500 4.76 0.00 44.69 3.21
825 3219 3.727227 GTGAAATTTTCGGGAAACGTCAC 59.273 43.478 9.63 9.63 44.69 3.67
831 3225 3.702045 ACTGGTGTGAAATTTTCGGGAAA 59.298 39.130 4.76 0.00 0.00 3.13
834 3228 3.566322 TGTACTGGTGTGAAATTTTCGGG 59.434 43.478 4.76 0.00 0.00 5.14
843 3237 1.758280 ACGGAACTGTACTGGTGTGAA 59.242 47.619 4.66 0.00 0.00 3.18
846 3240 0.391597 CCACGGAACTGTACTGGTGT 59.608 55.000 4.66 0.00 0.00 4.16
865 3259 3.671928 AGTTTGATTAGTGTACGCGTGTC 59.328 43.478 24.59 15.41 0.00 3.67
869 3263 3.549070 GGGTAGTTTGATTAGTGTACGCG 59.451 47.826 3.53 3.53 0.00 6.01
907 3301 4.958581 TCTGAGATGCTTGAGATTAGACCA 59.041 41.667 0.00 0.00 0.00 4.02
909 3303 6.073657 GCAATCTGAGATGCTTGAGATTAGAC 60.074 42.308 0.00 0.00 39.46 2.59
927 3321 8.545420 GCAATTGTTTCCATTTATAGCAATCTG 58.455 33.333 7.40 0.00 0.00 2.90
984 3379 3.999229 GTCATTGTGGTGACGATTCTC 57.001 47.619 0.00 0.00 39.12 2.87
1010 3405 2.076100 CTTTTGTGATGACGGCAGCTA 58.924 47.619 8.54 0.00 0.00 3.32
1021 3416 4.405116 ACCATTGTGCAACTTTTGTGAT 57.595 36.364 0.00 0.00 38.04 3.06
1063 3458 0.464373 ATAGCAATGGGTGGCGTCAG 60.464 55.000 0.00 0.00 34.54 3.51
1068 3463 2.162681 GGACATATAGCAATGGGTGGC 58.837 52.381 0.00 0.00 0.00 5.01
1070 3465 2.224523 ACGGGACATATAGCAATGGGTG 60.225 50.000 0.00 0.00 0.00 4.61
1076 3471 3.239449 AGATGGACGGGACATATAGCAA 58.761 45.455 0.00 0.00 0.00 3.91
1090 3485 0.248539 GCCACGACGAGTAGATGGAC 60.249 60.000 0.00 0.00 31.69 4.02
1104 3499 3.698382 GCGATCAGAAGAGCCACG 58.302 61.111 0.00 0.00 0.00 4.94
1146 3544 4.073549 CAAGGTATACGGTTTTTGGACCA 58.926 43.478 0.00 0.00 39.78 4.02
1147 3545 4.074259 ACAAGGTATACGGTTTTTGGACC 58.926 43.478 0.00 0.00 36.31 4.46
1152 3550 6.146021 CGTAGTCAACAAGGTATACGGTTTTT 59.854 38.462 0.00 0.00 34.06 1.94
1326 3724 0.877071 CAATATAGCCAAGCGCAGGG 59.123 55.000 18.86 15.84 41.38 4.45
1403 3801 1.818060 TGGCCAAAAGGTCATTGATCG 59.182 47.619 0.61 0.00 0.00 3.69
1408 3806 2.629617 CTGTCTTGGCCAAAAGGTCATT 59.370 45.455 20.91 0.00 0.00 2.57
1483 3881 2.153034 TCACTGATGGATGGTACCGA 57.847 50.000 7.57 0.00 0.00 4.69
1503 3901 6.804295 GCAATTTGTAACGGTTCACAATCATA 59.196 34.615 0.00 0.00 34.78 2.15
1541 3939 2.338809 TCCCTGAGAGGTCAACAATGT 58.661 47.619 0.00 0.00 31.93 2.71
1545 3943 1.279496 CCATCCCTGAGAGGTCAACA 58.721 55.000 0.00 0.00 31.93 3.33
1549 3947 0.108207 CATGCCATCCCTGAGAGGTC 59.892 60.000 0.00 0.00 31.93 3.85
1671 4069 8.094798 TGGAACGATTATTTCCTGCATAATAC 57.905 34.615 3.70 0.00 42.79 1.89
1717 4115 1.756375 GCAGCACCGCTCATACGAAG 61.756 60.000 0.00 0.00 36.40 3.79
1761 4159 2.093658 CCGAAGCTGAAACCTAGCCTTA 60.094 50.000 0.00 0.00 42.07 2.69
1842 4240 5.713861 CCCAATGTTTCCTTTCTCATCTTCT 59.286 40.000 0.00 0.00 0.00 2.85
1957 4355 9.399403 GTAGAAAAATAAAAACTTGAGGAGCTG 57.601 33.333 0.00 0.00 0.00 4.24
1962 4360 8.925700 GCCATGTAGAAAAATAAAAACTTGAGG 58.074 33.333 0.00 0.00 0.00 3.86
1974 4372 6.372381 GCATCTTTTTGGCCATGTAGAAAAAT 59.628 34.615 6.09 4.20 29.45 1.82
2097 4495 6.127925 TGTTTGATAGATTGAGTCCATGTTGC 60.128 38.462 0.00 0.00 0.00 4.17
2243 4641 2.761767 CCTGCACCAAATCCAATCATCA 59.238 45.455 0.00 0.00 0.00 3.07
2269 4667 1.076777 ACCCAGCTGTGTTGCACTT 60.077 52.632 13.81 0.00 35.11 3.16
2338 4736 3.262420 ACATTGCTGAGTAACGATCCAC 58.738 45.455 0.00 0.00 0.00 4.02
2393 4791 8.978472 TGTCTTCTAGTAGTAGTAAATGGCAAT 58.022 33.333 4.51 0.00 0.00 3.56
2428 4826 9.736414 CAGGGTAGATTCATCATTCATTTCTAT 57.264 33.333 0.00 0.00 0.00 1.98
2433 4832 6.433404 GCATCAGGGTAGATTCATCATTCATT 59.567 38.462 0.00 0.00 0.00 2.57
2592 4991 7.119699 TGCGAGAAGACATGTTATCATTTTCTT 59.880 33.333 0.00 0.00 36.93 2.52
2593 4992 6.595326 TGCGAGAAGACATGTTATCATTTTCT 59.405 34.615 0.00 1.71 33.42 2.52
2599 5002 6.337356 TGTATTGCGAGAAGACATGTTATCA 58.663 36.000 0.00 0.00 0.00 2.15
2606 5009 9.547753 AACTTATAATGTATTGCGAGAAGACAT 57.452 29.630 2.93 2.93 32.18 3.06
2761 5164 4.141846 TGGTTGAGTGCATGGCTTTAAAAA 60.142 37.500 0.00 0.00 0.00 1.94
2831 5234 4.789012 TCTTCTTTGGGAATCAATGCAC 57.211 40.909 0.00 0.00 34.98 4.57
2848 5251 6.258947 GCAACTTCCCATCACTAGTTATCTTC 59.741 42.308 0.00 0.00 30.19 2.87
2853 5256 6.614694 TTAGCAACTTCCCATCACTAGTTA 57.385 37.500 0.00 0.00 30.19 2.24
2863 5266 4.146564 GTTAGGGTTTTAGCAACTTCCCA 58.853 43.478 8.55 0.00 37.56 4.37
2899 5302 7.548196 TGGGCATTACTTAATTCTTACTTCG 57.452 36.000 0.00 0.00 0.00 3.79
2928 5331 5.032846 TCTCTCAGTATGGGACCAAGAATT 58.967 41.667 0.00 0.00 36.46 2.17
2929 5332 4.624913 TCTCTCAGTATGGGACCAAGAAT 58.375 43.478 0.00 0.00 36.46 2.40
2946 5349 5.381757 AGTGGTATCCATCTGTACTCTCTC 58.618 45.833 0.00 0.00 35.28 3.20
2947 5350 5.396057 AGTGGTATCCATCTGTACTCTCT 57.604 43.478 0.00 0.00 35.28 3.10
2948 5351 7.094118 GGATTAGTGGTATCCATCTGTACTCTC 60.094 44.444 0.00 0.00 41.05 3.20
2949 5352 6.722129 GGATTAGTGGTATCCATCTGTACTCT 59.278 42.308 0.00 0.00 41.05 3.24
2972 5375 0.104882 TACCCCAAGTCACCAGTGGA 60.105 55.000 18.40 0.00 34.05 4.02
3014 6276 0.887836 TTGCTCACTGCCTTGCTCTG 60.888 55.000 0.00 0.00 42.00 3.35
3028 6290 0.890996 CTGGTCCTTGGGTGTTGCTC 60.891 60.000 0.00 0.00 0.00 4.26
3053 6996 0.385751 TAGACATGCTAGCGTCCTGC 59.614 55.000 16.34 3.63 46.98 4.85
3063 7006 1.043816 CCCAGATCCGTAGACATGCT 58.956 55.000 0.00 0.00 0.00 3.79
3086 7029 3.586961 CCTCGGATCTCGCAGCGA 61.587 66.667 18.39 18.39 39.05 4.93
3087 7030 2.060004 TAACCTCGGATCTCGCAGCG 62.060 60.000 9.06 9.06 39.05 5.18
3110 7053 1.136828 TACTCCTGGCTTTGTGGTGT 58.863 50.000 0.00 0.00 0.00 4.16
3115 7058 2.436173 GCTCCTATACTCCTGGCTTTGT 59.564 50.000 0.00 0.00 0.00 2.83
3116 7059 2.546795 CGCTCCTATACTCCTGGCTTTG 60.547 54.545 0.00 0.00 0.00 2.77
3117 7060 1.689273 CGCTCCTATACTCCTGGCTTT 59.311 52.381 0.00 0.00 0.00 3.51
3168 7111 0.595588 CGCTCTATCGCCACTCTCAT 59.404 55.000 0.00 0.00 0.00 2.90
3169 7112 1.448119 CCGCTCTATCGCCACTCTCA 61.448 60.000 0.00 0.00 0.00 3.27
3170 7113 1.167155 TCCGCTCTATCGCCACTCTC 61.167 60.000 0.00 0.00 0.00 3.20
3171 7114 1.152943 TCCGCTCTATCGCCACTCT 60.153 57.895 0.00 0.00 0.00 3.24
3172 7115 1.008309 GTCCGCTCTATCGCCACTC 60.008 63.158 0.00 0.00 0.00 3.51
3173 7116 2.835705 CGTCCGCTCTATCGCCACT 61.836 63.158 0.00 0.00 0.00 4.00
3174 7117 2.353607 CGTCCGCTCTATCGCCAC 60.354 66.667 0.00 0.00 0.00 5.01
3175 7118 2.515290 TCGTCCGCTCTATCGCCA 60.515 61.111 0.00 0.00 0.00 5.69
3176 7119 2.252855 CTCGTCCGCTCTATCGCC 59.747 66.667 0.00 0.00 0.00 5.54
3177 7120 2.427740 GCTCGTCCGCTCTATCGC 60.428 66.667 0.00 0.00 0.00 4.58
3178 7121 3.335513 AGCTCGTCCGCTCTATCG 58.664 61.111 0.00 0.00 34.57 2.92
3186 7129 4.785512 AGCAAGCGAGCTCGTCCG 62.786 66.667 34.46 23.40 42.18 4.79
3193 7136 1.882167 CTAGCAGGAGCAAGCGAGC 60.882 63.158 0.00 0.00 45.49 5.03
3194 7137 1.227205 CCTAGCAGGAGCAAGCGAG 60.227 63.158 0.00 0.00 45.49 5.03
3195 7138 1.984570 ACCTAGCAGGAGCAAGCGA 60.985 57.895 8.91 0.00 45.49 4.93
3196 7139 1.812922 CACCTAGCAGGAGCAAGCG 60.813 63.158 8.91 0.00 45.49 4.68
3197 7140 1.451028 CCACCTAGCAGGAGCAAGC 60.451 63.158 8.91 0.00 45.49 4.01
3198 7141 0.107945 GTCCACCTAGCAGGAGCAAG 60.108 60.000 8.91 0.00 45.49 4.01
3199 7142 1.888436 CGTCCACCTAGCAGGAGCAA 61.888 60.000 8.91 0.00 45.49 3.91
3200 7143 2.351244 CGTCCACCTAGCAGGAGCA 61.351 63.158 8.91 0.00 45.49 4.26
3201 7144 1.605058 TTCGTCCACCTAGCAGGAGC 61.605 60.000 8.91 0.00 37.67 4.70
3202 7145 1.115467 ATTCGTCCACCTAGCAGGAG 58.885 55.000 8.91 1.68 37.67 3.69
3203 7146 0.824109 CATTCGTCCACCTAGCAGGA 59.176 55.000 8.91 0.00 37.67 3.86
3204 7147 0.179073 CCATTCGTCCACCTAGCAGG 60.179 60.000 1.16 1.16 42.49 4.85
3205 7148 0.824109 TCCATTCGTCCACCTAGCAG 59.176 55.000 0.00 0.00 0.00 4.24
3206 7149 1.271856 TTCCATTCGTCCACCTAGCA 58.728 50.000 0.00 0.00 0.00 3.49
3207 7150 2.622064 ATTCCATTCGTCCACCTAGC 57.378 50.000 0.00 0.00 0.00 3.42
3208 7151 3.654414 GCTATTCCATTCGTCCACCTAG 58.346 50.000 0.00 0.00 0.00 3.02
3209 7152 2.035449 CGCTATTCCATTCGTCCACCTA 59.965 50.000 0.00 0.00 0.00 3.08
3210 7153 1.202533 CGCTATTCCATTCGTCCACCT 60.203 52.381 0.00 0.00 0.00 4.00
3211 7154 1.217882 CGCTATTCCATTCGTCCACC 58.782 55.000 0.00 0.00 0.00 4.61
3212 7155 1.593006 CACGCTATTCCATTCGTCCAC 59.407 52.381 0.00 0.00 32.38 4.02
3213 7156 1.478916 TCACGCTATTCCATTCGTCCA 59.521 47.619 0.00 0.00 32.38 4.02
3214 7157 2.218953 TCACGCTATTCCATTCGTCC 57.781 50.000 0.00 0.00 32.38 4.79
3215 7158 3.123804 ACATCACGCTATTCCATTCGTC 58.876 45.455 0.00 0.00 32.38 4.20
3216 7159 3.179443 ACATCACGCTATTCCATTCGT 57.821 42.857 0.00 0.00 35.35 3.85
3217 7160 3.303329 CCAACATCACGCTATTCCATTCG 60.303 47.826 0.00 0.00 0.00 3.34
3218 7161 3.876914 TCCAACATCACGCTATTCCATTC 59.123 43.478 0.00 0.00 0.00 2.67
3219 7162 3.879295 CTCCAACATCACGCTATTCCATT 59.121 43.478 0.00 0.00 0.00 3.16
3220 7163 3.470709 CTCCAACATCACGCTATTCCAT 58.529 45.455 0.00 0.00 0.00 3.41
3221 7164 2.905075 CTCCAACATCACGCTATTCCA 58.095 47.619 0.00 0.00 0.00 3.53
3222 7165 1.599542 GCTCCAACATCACGCTATTCC 59.400 52.381 0.00 0.00 0.00 3.01
3223 7166 2.286294 CAGCTCCAACATCACGCTATTC 59.714 50.000 0.00 0.00 0.00 1.75
3224 7167 2.283298 CAGCTCCAACATCACGCTATT 58.717 47.619 0.00 0.00 0.00 1.73
3225 7168 1.473965 CCAGCTCCAACATCACGCTAT 60.474 52.381 0.00 0.00 0.00 2.97
3226 7169 0.108186 CCAGCTCCAACATCACGCTA 60.108 55.000 0.00 0.00 0.00 4.26
3227 7170 1.376424 CCAGCTCCAACATCACGCT 60.376 57.895 0.00 0.00 0.00 5.07
3228 7171 3.044059 GCCAGCTCCAACATCACGC 62.044 63.158 0.00 0.00 0.00 5.34
3229 7172 1.028330 ATGCCAGCTCCAACATCACG 61.028 55.000 0.00 0.00 0.00 4.35
3230 7173 1.133790 GAATGCCAGCTCCAACATCAC 59.866 52.381 0.00 0.00 0.00 3.06
3231 7174 1.272037 TGAATGCCAGCTCCAACATCA 60.272 47.619 0.00 0.00 0.00 3.07
3232 7175 1.404391 CTGAATGCCAGCTCCAACATC 59.596 52.381 0.00 0.00 35.89 3.06
3233 7176 1.272313 ACTGAATGCCAGCTCCAACAT 60.272 47.619 0.00 0.00 46.81 2.71
3234 7177 0.111061 ACTGAATGCCAGCTCCAACA 59.889 50.000 0.00 0.00 46.81 3.33
3235 7178 0.524862 CACTGAATGCCAGCTCCAAC 59.475 55.000 0.00 0.00 46.81 3.77
3236 7179 2.951269 CACTGAATGCCAGCTCCAA 58.049 52.632 0.00 0.00 46.81 3.53
3237 7180 4.728409 CACTGAATGCCAGCTCCA 57.272 55.556 0.00 0.00 46.81 3.86
3246 7189 3.047796 GTGTTTCTGCAAGCACTGAATG 58.952 45.455 0.00 0.00 39.86 2.67
3247 7190 2.689471 TGTGTTTCTGCAAGCACTGAAT 59.311 40.909 6.88 0.00 42.61 2.57
3248 7191 2.090760 TGTGTTTCTGCAAGCACTGAA 58.909 42.857 6.88 0.00 42.61 3.02
3249 7192 1.672363 CTGTGTTTCTGCAAGCACTGA 59.328 47.619 6.88 0.00 42.61 3.41
3250 7193 1.268896 CCTGTGTTTCTGCAAGCACTG 60.269 52.381 6.88 6.21 42.61 3.66
3251 7194 1.027357 CCTGTGTTTCTGCAAGCACT 58.973 50.000 6.88 0.00 42.61 4.40
3252 7195 0.740737 ACCTGTGTTTCTGCAAGCAC 59.259 50.000 0.00 0.00 42.51 4.40
3253 7196 0.740149 CACCTGTGTTTCTGCAAGCA 59.260 50.000 0.00 0.00 0.00 3.91
3254 7197 1.002033 CTCACCTGTGTTTCTGCAAGC 60.002 52.381 0.00 0.00 0.00 4.01
3255 7198 2.292267 ACTCACCTGTGTTTCTGCAAG 58.708 47.619 0.00 0.00 0.00 4.01
3256 7199 2.418368 ACTCACCTGTGTTTCTGCAA 57.582 45.000 0.00 0.00 0.00 4.08
3257 7200 2.418368 AACTCACCTGTGTTTCTGCA 57.582 45.000 0.00 0.00 0.00 4.41
3258 7201 2.796032 GCAAACTCACCTGTGTTTCTGC 60.796 50.000 3.12 2.91 39.00 4.26
3259 7202 2.539547 CGCAAACTCACCTGTGTTTCTG 60.540 50.000 3.12 0.00 39.00 3.02
3260 7203 1.670811 CGCAAACTCACCTGTGTTTCT 59.329 47.619 3.12 0.00 39.00 2.52
3261 7204 1.859998 GCGCAAACTCACCTGTGTTTC 60.860 52.381 0.30 0.07 39.00 2.78
3262 7205 0.100503 GCGCAAACTCACCTGTGTTT 59.899 50.000 0.30 0.65 40.89 2.83
3263 7206 1.029408 TGCGCAAACTCACCTGTGTT 61.029 50.000 8.16 0.00 33.72 3.32
3264 7207 1.439353 CTGCGCAAACTCACCTGTGT 61.439 55.000 13.05 0.00 0.00 3.72
3265 7208 1.280746 CTGCGCAAACTCACCTGTG 59.719 57.895 13.05 0.00 0.00 3.66
3266 7209 1.893808 CCTGCGCAAACTCACCTGT 60.894 57.895 13.05 0.00 0.00 4.00
3267 7210 2.620112 CCCTGCGCAAACTCACCTG 61.620 63.158 13.05 0.00 0.00 4.00
3268 7211 2.281761 CCCTGCGCAAACTCACCT 60.282 61.111 13.05 0.00 0.00 4.00
3269 7212 1.452145 TTTCCCTGCGCAAACTCACC 61.452 55.000 13.05 0.00 0.00 4.02
3270 7213 0.383949 TTTTCCCTGCGCAAACTCAC 59.616 50.000 13.05 0.00 0.00 3.51
3271 7214 0.667993 CTTTTCCCTGCGCAAACTCA 59.332 50.000 13.05 0.00 0.00 3.41
3272 7215 0.039165 CCTTTTCCCTGCGCAAACTC 60.039 55.000 13.05 0.00 0.00 3.01
3273 7216 0.755327 ACCTTTTCCCTGCGCAAACT 60.755 50.000 13.05 0.00 0.00 2.66
3274 7217 0.955905 TACCTTTTCCCTGCGCAAAC 59.044 50.000 13.05 0.00 0.00 2.93
3275 7218 0.955905 GTACCTTTTCCCTGCGCAAA 59.044 50.000 13.05 0.00 0.00 3.68
3276 7219 1.231958 CGTACCTTTTCCCTGCGCAA 61.232 55.000 13.05 0.00 0.00 4.85
3277 7220 1.669760 CGTACCTTTTCCCTGCGCA 60.670 57.895 10.98 10.98 0.00 6.09
3278 7221 3.035576 GCGTACCTTTTCCCTGCGC 62.036 63.158 0.00 0.00 36.75 6.09
3279 7222 1.024579 ATGCGTACCTTTTCCCTGCG 61.025 55.000 0.00 0.00 0.00 5.18
3280 7223 0.451783 CATGCGTACCTTTTCCCTGC 59.548 55.000 0.00 0.00 0.00 4.85
3281 7224 1.468520 CACATGCGTACCTTTTCCCTG 59.531 52.381 0.00 0.00 0.00 4.45
3282 7225 1.613255 CCACATGCGTACCTTTTCCCT 60.613 52.381 0.00 0.00 0.00 4.20
3283 7226 0.808755 CCACATGCGTACCTTTTCCC 59.191 55.000 0.00 0.00 0.00 3.97
3284 7227 1.467342 GTCCACATGCGTACCTTTTCC 59.533 52.381 0.00 0.00 0.00 3.13
3285 7228 1.127951 CGTCCACATGCGTACCTTTTC 59.872 52.381 0.00 0.00 0.00 2.29
3286 7229 1.153353 CGTCCACATGCGTACCTTTT 58.847 50.000 0.00 0.00 0.00 2.27
3287 7230 0.034337 ACGTCCACATGCGTACCTTT 59.966 50.000 0.00 0.00 39.72 3.11
3288 7231 0.669318 CACGTCCACATGCGTACCTT 60.669 55.000 0.00 0.00 39.48 3.50
3289 7232 1.080093 CACGTCCACATGCGTACCT 60.080 57.895 0.00 0.00 39.48 3.08
3290 7233 2.098233 CCACGTCCACATGCGTACC 61.098 63.158 0.00 0.00 39.48 3.34
3291 7234 2.098233 CCCACGTCCACATGCGTAC 61.098 63.158 0.00 0.00 39.48 3.67
3292 7235 2.263227 CCCACGTCCACATGCGTA 59.737 61.111 0.00 0.00 39.48 4.42
3296 7239 2.178876 TACTGGCCCACGTCCACATG 62.179 60.000 0.00 0.00 0.00 3.21
3297 7240 1.916273 TACTGGCCCACGTCCACAT 60.916 57.895 0.00 0.00 0.00 3.21
3298 7241 2.524640 TACTGGCCCACGTCCACA 60.525 61.111 0.00 0.00 0.00 4.17
3299 7242 2.047560 GTACTGGCCCACGTCCAC 60.048 66.667 0.00 0.00 0.00 4.02
3300 7243 3.687102 CGTACTGGCCCACGTCCA 61.687 66.667 12.15 0.00 33.56 4.02
3301 7244 2.718073 ATCGTACTGGCCCACGTCC 61.718 63.158 17.82 0.00 39.18 4.79
3302 7245 1.518572 CATCGTACTGGCCCACGTC 60.519 63.158 17.82 0.00 39.18 4.34
3303 7246 1.537814 TTCATCGTACTGGCCCACGT 61.538 55.000 17.82 7.86 39.18 4.49
3304 7247 0.390603 TTTCATCGTACTGGCCCACG 60.391 55.000 13.73 13.73 39.48 4.94
3305 7248 2.038387 ATTTCATCGTACTGGCCCAC 57.962 50.000 0.00 0.00 0.00 4.61
3306 7249 3.537580 GTTATTTCATCGTACTGGCCCA 58.462 45.455 0.00 0.00 0.00 5.36
3307 7250 2.542595 CGTTATTTCATCGTACTGGCCC 59.457 50.000 0.00 0.00 0.00 5.80
3308 7251 3.244579 GTCGTTATTTCATCGTACTGGCC 59.755 47.826 0.00 0.00 0.00 5.36
3309 7252 3.061403 CGTCGTTATTTCATCGTACTGGC 60.061 47.826 0.00 0.00 0.00 4.85
3310 7253 4.027945 CACGTCGTTATTTCATCGTACTGG 60.028 45.833 0.00 0.00 0.00 4.00
3311 7254 4.027945 CCACGTCGTTATTTCATCGTACTG 60.028 45.833 0.00 0.00 0.00 2.74
3312 7255 4.100529 CCACGTCGTTATTTCATCGTACT 58.899 43.478 0.00 0.00 0.00 2.73
3313 7256 3.241322 CCCACGTCGTTATTTCATCGTAC 59.759 47.826 0.00 0.00 0.00 3.67
3314 7257 3.119531 ACCCACGTCGTTATTTCATCGTA 60.120 43.478 0.00 0.00 0.00 3.43
3315 7258 2.264813 CCCACGTCGTTATTTCATCGT 58.735 47.619 0.00 0.00 0.00 3.73
3316 7259 2.028763 CACCCACGTCGTTATTTCATCG 59.971 50.000 0.00 0.00 0.00 3.84
3317 7260 2.350498 CCACCCACGTCGTTATTTCATC 59.650 50.000 0.00 0.00 0.00 2.92
3318 7261 2.352388 CCACCCACGTCGTTATTTCAT 58.648 47.619 0.00 0.00 0.00 2.57
3319 7262 1.608542 CCCACCCACGTCGTTATTTCA 60.609 52.381 0.00 0.00 0.00 2.69
3320 7263 1.081094 CCCACCCACGTCGTTATTTC 58.919 55.000 0.00 0.00 0.00 2.17
3321 7264 0.397564 ACCCACCCACGTCGTTATTT 59.602 50.000 0.00 0.00 0.00 1.40
3322 7265 0.320946 CACCCACCCACGTCGTTATT 60.321 55.000 0.00 0.00 0.00 1.40
3323 7266 1.294138 CACCCACCCACGTCGTTAT 59.706 57.895 0.00 0.00 0.00 1.89
3324 7267 2.735883 CACCCACCCACGTCGTTA 59.264 61.111 0.00 0.00 0.00 3.18
3325 7268 4.922026 GCACCCACCCACGTCGTT 62.922 66.667 0.00 0.00 0.00 3.85
3328 7271 2.386064 TTACTGCACCCACCCACGTC 62.386 60.000 0.00 0.00 0.00 4.34
3329 7272 2.445119 TTACTGCACCCACCCACGT 61.445 57.895 0.00 0.00 0.00 4.49
3330 7273 1.964373 GTTACTGCACCCACCCACG 60.964 63.158 0.00 0.00 0.00 4.94
3331 7274 1.964373 CGTTACTGCACCCACCCAC 60.964 63.158 0.00 0.00 0.00 4.61
3332 7275 2.428187 CGTTACTGCACCCACCCA 59.572 61.111 0.00 0.00 0.00 4.51
3333 7276 2.359478 CCGTTACTGCACCCACCC 60.359 66.667 0.00 0.00 0.00 4.61
3334 7277 1.375523 CTCCGTTACTGCACCCACC 60.376 63.158 0.00 0.00 0.00 4.61
3335 7278 0.389948 CTCTCCGTTACTGCACCCAC 60.390 60.000 0.00 0.00 0.00 4.61
3336 7279 1.972198 CTCTCCGTTACTGCACCCA 59.028 57.895 0.00 0.00 0.00 4.51
3337 7280 1.448013 GCTCTCCGTTACTGCACCC 60.448 63.158 0.00 0.00 0.00 4.61
3338 7281 0.815734 TAGCTCTCCGTTACTGCACC 59.184 55.000 0.00 0.00 0.00 5.01
3339 7282 2.260481 GTTAGCTCTCCGTTACTGCAC 58.740 52.381 0.00 0.00 0.00 4.57
3340 7283 1.135489 CGTTAGCTCTCCGTTACTGCA 60.135 52.381 0.00 0.00 0.00 4.41
3341 7284 1.131883 TCGTTAGCTCTCCGTTACTGC 59.868 52.381 0.00 0.00 0.00 4.40
3342 7285 3.364062 CATCGTTAGCTCTCCGTTACTG 58.636 50.000 0.00 0.00 0.00 2.74
3343 7286 2.223525 GCATCGTTAGCTCTCCGTTACT 60.224 50.000 0.00 0.00 0.00 2.24
3344 7287 2.117910 GCATCGTTAGCTCTCCGTTAC 58.882 52.381 0.00 0.00 0.00 2.50
3345 7288 1.066605 GGCATCGTTAGCTCTCCGTTA 59.933 52.381 0.00 0.00 0.00 3.18
3346 7289 0.179108 GGCATCGTTAGCTCTCCGTT 60.179 55.000 0.00 0.00 0.00 4.44
3347 7290 1.437986 GGCATCGTTAGCTCTCCGT 59.562 57.895 0.00 0.00 0.00 4.69
3348 7291 1.658717 CGGCATCGTTAGCTCTCCG 60.659 63.158 0.00 0.00 0.00 4.63
3349 7292 4.327885 CGGCATCGTTAGCTCTCC 57.672 61.111 0.00 0.00 0.00 3.71
3360 7303 0.941463 CATCCTGTAGCGACGGCATC 60.941 60.000 0.00 0.00 43.41 3.91
3361 7304 1.068083 CATCCTGTAGCGACGGCAT 59.932 57.895 0.00 0.00 43.41 4.40
3362 7305 1.600511 TTCATCCTGTAGCGACGGCA 61.601 55.000 0.00 0.00 43.41 5.69
3363 7306 0.872021 CTTCATCCTGTAGCGACGGC 60.872 60.000 0.00 0.00 40.37 5.68
3364 7307 0.872021 GCTTCATCCTGTAGCGACGG 60.872 60.000 0.00 0.00 31.40 4.79
3365 7308 0.179137 TGCTTCATCCTGTAGCGACG 60.179 55.000 0.00 0.00 42.66 5.12
3366 7309 1.281899 GTGCTTCATCCTGTAGCGAC 58.718 55.000 0.00 0.00 42.66 5.19
3367 7310 3.741029 GTGCTTCATCCTGTAGCGA 57.259 52.632 0.00 0.00 42.66 4.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.