Multiple sequence alignment - TraesCS2D01G505800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G505800 chr2D 100.000 2444 0 0 1 2444 599918961 599921404 0.000000e+00 4514.0
1 TraesCS2D01G505800 chr2D 86.752 234 27 3 2159 2389 349300080 349300312 8.670000e-65 257.0
2 TraesCS2D01G505800 chr2A 91.222 843 36 19 663 1476 733579323 733580156 0.000000e+00 1112.0
3 TraesCS2D01G505800 chr2A 80.369 596 78 24 1566 2138 733580199 733580778 1.350000e-112 416.0
4 TraesCS2D01G505800 chr2A 84.958 359 31 13 1060 1399 733583742 733584096 2.330000e-90 342.0
5 TraesCS2D01G505800 chr2A 87.259 259 28 4 81 337 733580956 733581211 8.550000e-75 291.0
6 TraesCS2D01G505800 chr2A 93.902 164 5 3 73 232 733563552 733563714 2.430000e-60 243.0
7 TraesCS2D01G505800 chr2B 92.045 792 36 10 1382 2163 729646068 729646842 0.000000e+00 1088.0
8 TraesCS2D01G505800 chr2B 91.860 430 14 2 946 1354 729645642 729646071 4.530000e-162 580.0
9 TraesCS2D01G505800 chr2B 85.253 434 29 16 103 527 729630182 729630589 4.860000e-112 414.0
10 TraesCS2D01G505800 chr2B 96.491 57 2 0 751 807 729632177 729632233 7.190000e-16 95.3
11 TraesCS2D01G505800 chr2B 91.111 45 2 2 1671 1714 127155479 127155522 2.620000e-05 60.2
12 TraesCS2D01G505800 chr1D 84.298 484 60 15 1674 2149 162051960 162052435 2.210000e-125 459.0
13 TraesCS2D01G505800 chr1D 95.595 227 10 0 2163 2389 461742220 461741994 4.970000e-97 364.0
14 TraesCS2D01G505800 chr1B 84.362 486 57 17 1674 2149 240503600 240503124 2.210000e-125 459.0
15 TraesCS2D01G505800 chr5D 96.930 228 7 0 2162 2389 398366403 398366176 1.370000e-102 383.0
16 TraesCS2D01G505800 chr5D 87.500 232 25 3 2161 2389 496943313 496943543 5.180000e-67 265.0
17 TraesCS2D01G505800 chr5D 90.476 42 4 0 1672 1713 441921074 441921115 3.390000e-04 56.5
18 TraesCS2D01G505800 chr7D 80.808 495 71 19 1663 2146 95694177 95693696 1.380000e-97 366.0
19 TraesCS2D01G505800 chr1A 94.273 227 12 1 2163 2389 394125683 394125908 1.800000e-91 346.0
20 TraesCS2D01G505800 chr5B 80.672 476 60 16 1692 2138 356716040 356715568 8.370000e-90 340.0
21 TraesCS2D01G505800 chr6A 79.563 504 77 18 1656 2148 409796157 409795669 1.080000e-88 337.0
22 TraesCS2D01G505800 chr5A 82.222 405 49 14 1690 2080 404227464 404227069 6.520000e-86 327.0
23 TraesCS2D01G505800 chr7A 80.605 397 55 17 1668 2056 98792964 98792582 1.110000e-73 287.0
24 TraesCS2D01G505800 chr7A 86.463 229 27 3 2164 2389 63571240 63571467 5.220000e-62 248.0
25 TraesCS2D01G505800 chr4A 86.580 231 27 4 2162 2389 712114302 712114531 4.030000e-63 252.0
26 TraesCS2D01G505800 chr3D 86.580 231 27 4 2162 2389 77397805 77398034 4.030000e-63 252.0
27 TraesCS2D01G505800 chrUn 86.522 230 27 3 2163 2389 101160637 101160865 1.450000e-62 250.0
28 TraesCS2D01G505800 chr3B 87.324 71 7 2 1668 1737 765651020 765650951 2.010000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G505800 chr2D 599918961 599921404 2443 False 4514.00 4514 100.0000 1 2444 1 chr2D.!!$F2 2443
1 TraesCS2D01G505800 chr2A 733579323 733584096 4773 False 540.25 1112 85.9520 81 2138 4 chr2A.!!$F2 2057
2 TraesCS2D01G505800 chr2B 729645642 729646842 1200 False 834.00 1088 91.9525 946 2163 2 chr2B.!!$F3 1217
3 TraesCS2D01G505800 chr2B 729630182 729632233 2051 False 254.65 414 90.8720 103 807 2 chr2B.!!$F2 704

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
98 99 0.037734 TGCAGTGGTAGAGGACGAGA 59.962 55.0 0.0 0.0 0.0 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1721 3202 0.806241 TCGGACATGATCGACGTTGA 59.194 50.0 8.21 8.21 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.349663 CAAGGTCGTGTTTCTGTTTTCA 57.650 40.909 0.00 0.00 0.00 2.69
22 23 4.920376 CAAGGTCGTGTTTCTGTTTTCAT 58.080 39.130 0.00 0.00 0.00 2.57
23 24 5.339990 CAAGGTCGTGTTTCTGTTTTCATT 58.660 37.500 0.00 0.00 0.00 2.57
24 25 5.576447 AGGTCGTGTTTCTGTTTTCATTT 57.424 34.783 0.00 0.00 0.00 2.32
25 26 5.578776 AGGTCGTGTTTCTGTTTTCATTTC 58.421 37.500 0.00 0.00 0.00 2.17
26 27 4.738252 GGTCGTGTTTCTGTTTTCATTTCC 59.262 41.667 0.00 0.00 0.00 3.13
27 28 5.336744 GTCGTGTTTCTGTTTTCATTTCCA 58.663 37.500 0.00 0.00 0.00 3.53
28 29 5.229260 GTCGTGTTTCTGTTTTCATTTCCAC 59.771 40.000 0.00 0.00 0.00 4.02
29 30 5.124776 TCGTGTTTCTGTTTTCATTTCCACT 59.875 36.000 0.00 0.00 0.00 4.00
30 31 5.229887 CGTGTTTCTGTTTTCATTTCCACTG 59.770 40.000 0.00 0.00 0.00 3.66
31 32 5.005682 GTGTTTCTGTTTTCATTTCCACTGC 59.994 40.000 0.00 0.00 0.00 4.40
32 33 4.320608 TTCTGTTTTCATTTCCACTGCC 57.679 40.909 0.00 0.00 0.00 4.85
33 34 2.293122 TCTGTTTTCATTTCCACTGCCG 59.707 45.455 0.00 0.00 0.00 5.69
34 35 2.028130 TGTTTTCATTTCCACTGCCGT 58.972 42.857 0.00 0.00 0.00 5.68
35 36 2.428890 TGTTTTCATTTCCACTGCCGTT 59.571 40.909 0.00 0.00 0.00 4.44
36 37 3.118956 TGTTTTCATTTCCACTGCCGTTT 60.119 39.130 0.00 0.00 0.00 3.60
37 38 2.791383 TTCATTTCCACTGCCGTTTG 57.209 45.000 0.00 0.00 0.00 2.93
38 39 1.686355 TCATTTCCACTGCCGTTTGT 58.314 45.000 0.00 0.00 0.00 2.83
39 40 2.028130 TCATTTCCACTGCCGTTTGTT 58.972 42.857 0.00 0.00 0.00 2.83
40 41 2.034053 TCATTTCCACTGCCGTTTGTTC 59.966 45.455 0.00 0.00 0.00 3.18
41 42 1.464734 TTTCCACTGCCGTTTGTTCA 58.535 45.000 0.00 0.00 0.00 3.18
42 43 1.686355 TTCCACTGCCGTTTGTTCAT 58.314 45.000 0.00 0.00 0.00 2.57
43 44 1.686355 TCCACTGCCGTTTGTTCATT 58.314 45.000 0.00 0.00 0.00 2.57
44 45 1.606668 TCCACTGCCGTTTGTTCATTC 59.393 47.619 0.00 0.00 0.00 2.67
45 46 1.662876 CCACTGCCGTTTGTTCATTCG 60.663 52.381 0.00 0.00 0.00 3.34
46 47 1.002900 CACTGCCGTTTGTTCATTCGT 60.003 47.619 0.00 0.00 0.00 3.85
47 48 1.263217 ACTGCCGTTTGTTCATTCGTC 59.737 47.619 0.00 0.00 0.00 4.20
48 49 1.262950 CTGCCGTTTGTTCATTCGTCA 59.737 47.619 0.00 0.00 0.00 4.35
49 50 1.876799 TGCCGTTTGTTCATTCGTCAT 59.123 42.857 0.00 0.00 0.00 3.06
50 51 2.241722 GCCGTTTGTTCATTCGTCATG 58.758 47.619 0.00 0.00 0.00 3.07
51 52 2.241722 CCGTTTGTTCATTCGTCATGC 58.758 47.619 0.00 0.00 32.13 4.06
52 53 2.095768 CCGTTTGTTCATTCGTCATGCT 60.096 45.455 0.00 0.00 32.13 3.79
53 54 3.554524 CGTTTGTTCATTCGTCATGCTT 58.445 40.909 0.00 0.00 32.13 3.91
54 55 3.974401 CGTTTGTTCATTCGTCATGCTTT 59.026 39.130 0.00 0.00 32.13 3.51
55 56 4.440758 CGTTTGTTCATTCGTCATGCTTTT 59.559 37.500 0.00 0.00 32.13 2.27
56 57 5.623264 CGTTTGTTCATTCGTCATGCTTTTA 59.377 36.000 0.00 0.00 32.13 1.52
57 58 6.183359 CGTTTGTTCATTCGTCATGCTTTTAG 60.183 38.462 0.00 0.00 32.13 1.85
58 59 4.722194 TGTTCATTCGTCATGCTTTTAGC 58.278 39.130 0.00 0.00 42.82 3.09
59 60 4.455533 TGTTCATTCGTCATGCTTTTAGCT 59.544 37.500 0.00 0.00 42.97 3.32
60 61 4.604843 TCATTCGTCATGCTTTTAGCTG 57.395 40.909 0.00 0.00 42.97 4.24
61 62 3.374988 TCATTCGTCATGCTTTTAGCTGG 59.625 43.478 0.00 0.00 42.97 4.85
62 63 1.737838 TCGTCATGCTTTTAGCTGGG 58.262 50.000 0.00 0.00 42.97 4.45
63 64 1.277842 TCGTCATGCTTTTAGCTGGGA 59.722 47.619 0.00 0.00 42.97 4.37
64 65 1.398390 CGTCATGCTTTTAGCTGGGAC 59.602 52.381 0.00 4.57 42.97 4.46
65 66 2.716217 GTCATGCTTTTAGCTGGGACT 58.284 47.619 0.00 0.00 42.97 3.85
66 67 2.421424 GTCATGCTTTTAGCTGGGACTG 59.579 50.000 0.00 0.00 42.97 3.51
67 68 1.747355 CATGCTTTTAGCTGGGACTGG 59.253 52.381 0.00 0.00 42.97 4.00
68 69 0.038166 TGCTTTTAGCTGGGACTGGG 59.962 55.000 0.00 0.00 42.97 4.45
69 70 0.328258 GCTTTTAGCTGGGACTGGGA 59.672 55.000 0.00 0.00 38.45 4.37
70 71 1.950954 GCTTTTAGCTGGGACTGGGAC 60.951 57.143 0.00 0.00 38.45 4.46
71 72 1.630878 CTTTTAGCTGGGACTGGGACT 59.369 52.381 0.00 0.00 0.00 3.85
72 73 1.276622 TTTAGCTGGGACTGGGACTC 58.723 55.000 0.00 0.00 0.00 3.36
73 74 0.413832 TTAGCTGGGACTGGGACTCT 59.586 55.000 0.00 0.00 0.00 3.24
74 75 0.324738 TAGCTGGGACTGGGACTCTG 60.325 60.000 0.00 0.00 0.00 3.35
75 76 2.664081 GCTGGGACTGGGACTCTGG 61.664 68.421 0.00 0.00 0.00 3.86
76 77 1.992277 CTGGGACTGGGACTCTGGG 60.992 68.421 0.00 0.00 0.00 4.45
77 78 2.450243 GGGACTGGGACTCTGGGA 59.550 66.667 0.00 0.00 0.00 4.37
78 79 1.687493 GGGACTGGGACTCTGGGAG 60.687 68.421 0.00 0.00 35.52 4.30
79 80 1.079438 GGACTGGGACTCTGGGAGT 59.921 63.158 0.00 0.00 46.42 3.85
80 81 1.261238 GGACTGGGACTCTGGGAGTG 61.261 65.000 4.85 0.00 43.53 3.51
86 87 1.294780 GACTCTGGGAGTGCAGTGG 59.705 63.158 0.00 0.00 43.53 4.00
87 88 1.460305 ACTCTGGGAGTGCAGTGGT 60.460 57.895 0.00 0.00 41.76 4.16
88 89 0.178932 ACTCTGGGAGTGCAGTGGTA 60.179 55.000 0.00 0.00 41.76 3.25
89 90 0.534412 CTCTGGGAGTGCAGTGGTAG 59.466 60.000 0.00 0.00 0.00 3.18
90 91 0.114364 TCTGGGAGTGCAGTGGTAGA 59.886 55.000 0.00 0.00 0.00 2.59
91 92 0.534412 CTGGGAGTGCAGTGGTAGAG 59.466 60.000 0.00 0.00 0.00 2.43
92 93 0.904865 TGGGAGTGCAGTGGTAGAGG 60.905 60.000 0.00 0.00 0.00 3.69
93 94 0.614979 GGGAGTGCAGTGGTAGAGGA 60.615 60.000 0.00 0.00 0.00 3.71
94 95 0.533032 GGAGTGCAGTGGTAGAGGAC 59.467 60.000 0.00 0.00 0.00 3.85
95 96 0.171455 GAGTGCAGTGGTAGAGGACG 59.829 60.000 0.00 0.00 0.00 4.79
96 97 0.251209 AGTGCAGTGGTAGAGGACGA 60.251 55.000 0.00 0.00 0.00 4.20
97 98 0.171455 GTGCAGTGGTAGAGGACGAG 59.829 60.000 0.00 0.00 0.00 4.18
98 99 0.037734 TGCAGTGGTAGAGGACGAGA 59.962 55.000 0.00 0.00 0.00 4.04
99 100 0.452585 GCAGTGGTAGAGGACGAGAC 59.547 60.000 0.00 0.00 0.00 3.36
100 101 0.727970 CAGTGGTAGAGGACGAGACG 59.272 60.000 0.00 0.00 0.00 4.18
101 102 0.612229 AGTGGTAGAGGACGAGACGA 59.388 55.000 0.00 0.00 0.00 4.20
125 126 2.159382 CCCTGGTCGCAATGTTTTAGT 58.841 47.619 0.00 0.00 0.00 2.24
256 260 2.869897 GTTTGCTCAAACGTGTTTCCA 58.130 42.857 9.39 0.00 40.85 3.53
257 261 3.246619 GTTTGCTCAAACGTGTTTCCAA 58.753 40.909 9.39 0.00 40.85 3.53
258 262 2.553079 TGCTCAAACGTGTTTCCAAC 57.447 45.000 0.00 0.00 0.00 3.77
259 263 2.088423 TGCTCAAACGTGTTTCCAACT 58.912 42.857 0.00 0.00 0.00 3.16
260 264 2.490115 TGCTCAAACGTGTTTCCAACTT 59.510 40.909 0.00 0.00 0.00 2.66
261 265 2.851824 GCTCAAACGTGTTTCCAACTTG 59.148 45.455 0.00 0.00 0.00 3.16
262 266 2.851824 CTCAAACGTGTTTCCAACTTGC 59.148 45.455 0.00 0.00 0.00 4.01
263 267 1.581602 CAAACGTGTTTCCAACTTGCG 59.418 47.619 0.00 0.00 0.00 4.85
264 268 0.099791 AACGTGTTTCCAACTTGCGG 59.900 50.000 0.00 0.00 0.00 5.69
265 269 1.657181 CGTGTTTCCAACTTGCGGC 60.657 57.895 0.00 0.00 0.00 6.53
266 270 1.299850 GTGTTTCCAACTTGCGGCC 60.300 57.895 0.00 0.00 0.00 6.13
267 271 2.338620 GTTTCCAACTTGCGGCCC 59.661 61.111 0.00 0.00 0.00 5.80
268 272 3.291383 TTTCCAACTTGCGGCCCG 61.291 61.111 0.00 0.00 0.00 6.13
277 281 3.620785 TGCGGCCCGGCAAAATTT 61.621 55.556 12.58 0.00 40.59 1.82
294 298 6.405538 CAAAATTTCTTGCCCCAGCTAATAA 58.594 36.000 0.00 0.00 40.80 1.40
295 299 6.813293 AAATTTCTTGCCCCAGCTAATAAT 57.187 33.333 0.00 0.00 40.80 1.28
296 300 6.813293 AATTTCTTGCCCCAGCTAATAATT 57.187 33.333 0.00 0.00 40.80 1.40
310 327 6.367422 CAGCTAATAATTAGAGAAAGCGAGGG 59.633 42.308 0.00 0.00 35.20 4.30
327 344 5.105513 AGCGAGGGAAAAGAAAGAACAAAAA 60.106 36.000 0.00 0.00 0.00 1.94
345 362 5.125578 ACAAAAACACCTTCCTCTTTGACTC 59.874 40.000 0.00 0.00 0.00 3.36
384 401 3.722728 AAAGGCTGACTGCAAGAAAAG 57.277 42.857 6.65 0.00 45.15 2.27
391 408 3.214328 TGACTGCAAGAAAAGGTCTTCC 58.786 45.455 2.27 0.00 45.25 3.46
436 453 5.118286 CCCCATGTGCCTGAAAATAAATTC 58.882 41.667 0.00 0.00 0.00 2.17
437 454 5.338219 CCCCATGTGCCTGAAAATAAATTCA 60.338 40.000 0.00 0.00 37.70 2.57
439 456 5.581874 CCATGTGCCTGAAAATAAATTCACC 59.418 40.000 0.00 0.00 35.55 4.02
442 459 5.774690 TGTGCCTGAAAATAAATTCACCTCT 59.225 36.000 0.00 0.00 35.55 3.69
444 461 5.105063 GCCTGAAAATAAATTCACCTCTGC 58.895 41.667 0.00 0.00 35.55 4.26
445 462 5.105595 GCCTGAAAATAAATTCACCTCTGCT 60.106 40.000 0.00 0.00 35.55 4.24
446 463 6.573094 GCCTGAAAATAAATTCACCTCTGCTT 60.573 38.462 0.00 0.00 35.55 3.91
448 465 6.611381 TGAAAATAAATTCACCTCTGCTTCG 58.389 36.000 0.00 0.00 34.50 3.79
450 467 1.168714 AAATTCACCTCTGCTTCGGC 58.831 50.000 0.00 0.00 42.19 5.54
451 468 0.678048 AATTCACCTCTGCTTCGGCC 60.678 55.000 0.00 0.00 40.91 6.13
452 469 1.841302 ATTCACCTCTGCTTCGGCCA 61.841 55.000 2.24 0.00 40.91 5.36
455 472 2.348998 CCTCTGCTTCGGCCACTT 59.651 61.111 2.24 0.00 40.91 3.16
465 482 3.650950 GGCCACTTCTCCCAGCCA 61.651 66.667 0.00 0.00 43.32 4.75
471 488 0.398318 ACTTCTCCCAGCCACTTCAC 59.602 55.000 0.00 0.00 0.00 3.18
488 505 3.703001 TCACTGTTCATCTTCTTCCCC 57.297 47.619 0.00 0.00 0.00 4.81
492 509 4.157289 CACTGTTCATCTTCTTCCCCAATG 59.843 45.833 0.00 0.00 0.00 2.82
493 510 3.698040 CTGTTCATCTTCTTCCCCAATGG 59.302 47.826 0.00 0.00 0.00 3.16
499 516 0.776810 TTCTTCCCCAATGGTGCAGA 59.223 50.000 0.00 0.00 34.77 4.26
514 531 2.603776 AGACCACCTCCGACCCAC 60.604 66.667 0.00 0.00 0.00 4.61
527 544 3.335729 CCCACCCCTAACCGCCTT 61.336 66.667 0.00 0.00 0.00 4.35
552 850 1.832912 CTATCCTCTGCACCCCCAC 59.167 63.158 0.00 0.00 0.00 4.61
573 1995 5.403512 CACCCCTAAAGATAGATAGTGGGA 58.596 45.833 0.00 0.00 35.17 4.37
574 1996 5.246429 CACCCCTAAAGATAGATAGTGGGAC 59.754 48.000 0.00 0.00 35.17 4.46
588 2010 1.682684 GGGACTGCCTCTTCTCCGA 60.683 63.158 0.00 0.00 0.00 4.55
589 2011 1.045911 GGGACTGCCTCTTCTCCGAT 61.046 60.000 0.00 0.00 0.00 4.18
590 2012 0.103937 GGACTGCCTCTTCTCCGATG 59.896 60.000 0.00 0.00 0.00 3.84
591 2013 1.107114 GACTGCCTCTTCTCCGATGA 58.893 55.000 0.00 0.00 0.00 2.92
592 2014 1.066908 GACTGCCTCTTCTCCGATGAG 59.933 57.143 0.00 0.00 40.17 2.90
593 2015 0.249405 CTGCCTCTTCTCCGATGAGC 60.249 60.000 0.00 0.00 38.58 4.26
594 2016 0.685785 TGCCTCTTCTCCGATGAGCT 60.686 55.000 0.00 0.00 38.58 4.09
612 2034 5.171476 TGAGCTCGGAATGAACTAGAAAAG 58.829 41.667 9.64 0.00 0.00 2.27
618 2040 4.091509 CGGAATGAACTAGAAAAGGTGACG 59.908 45.833 0.00 0.00 0.00 4.35
620 2042 5.120363 GGAATGAACTAGAAAAGGTGACGAC 59.880 44.000 0.00 0.00 0.00 4.34
621 2043 4.659111 TGAACTAGAAAAGGTGACGACA 57.341 40.909 0.00 0.00 0.00 4.35
638 2061 4.844267 ACGACACGAAGAAAATTTTCAGG 58.156 39.130 28.00 19.28 39.61 3.86
642 2065 3.735746 CACGAAGAAAATTTTCAGGCACC 59.264 43.478 28.00 11.86 39.61 5.01
644 2067 3.317150 GAAGAAAATTTTCAGGCACCCG 58.683 45.455 28.00 0.00 39.61 5.28
645 2068 2.593026 AGAAAATTTTCAGGCACCCGA 58.407 42.857 28.00 0.00 39.61 5.14
646 2069 2.558359 AGAAAATTTTCAGGCACCCGAG 59.442 45.455 28.00 0.00 39.61 4.63
648 2071 2.514458 AATTTTCAGGCACCCGAGAT 57.486 45.000 0.00 0.00 0.00 2.75
650 2073 3.864789 ATTTTCAGGCACCCGAGATAT 57.135 42.857 0.00 0.00 0.00 1.63
652 2075 4.336889 TTTTCAGGCACCCGAGATATAG 57.663 45.455 0.00 0.00 0.00 1.31
654 2077 0.969149 CAGGCACCCGAGATATAGCA 59.031 55.000 0.00 0.00 0.00 3.49
657 2080 2.438021 AGGCACCCGAGATATAGCAAAA 59.562 45.455 0.00 0.00 0.00 2.44
658 2081 2.548480 GGCACCCGAGATATAGCAAAAC 59.452 50.000 0.00 0.00 0.00 2.43
659 2082 3.467803 GCACCCGAGATATAGCAAAACT 58.532 45.455 0.00 0.00 0.00 2.66
663 2086 4.130118 CCCGAGATATAGCAAAACTGCTT 58.870 43.478 4.74 0.00 43.52 3.91
664 2087 4.576463 CCCGAGATATAGCAAAACTGCTTT 59.424 41.667 4.74 0.09 43.52 3.51
665 2088 5.066505 CCCGAGATATAGCAAAACTGCTTTT 59.933 40.000 4.74 0.00 43.52 2.27
705 2128 0.381801 CTTGCACACTGAACACACCC 59.618 55.000 0.00 0.00 0.00 4.61
709 2132 1.001378 GCACACTGAACACACCCAATC 60.001 52.381 0.00 0.00 0.00 2.67
832 2257 0.737715 GAGCTCAGCGTCCGTTTCAT 60.738 55.000 9.40 0.00 0.00 2.57
852 2277 1.133823 TCTTTCAAAGAGGCAGGCACA 60.134 47.619 0.00 0.00 32.71 4.57
853 2278 1.000938 CTTTCAAAGAGGCAGGCACAC 60.001 52.381 0.00 0.00 0.00 3.82
854 2279 0.823356 TTCAAAGAGGCAGGCACACC 60.823 55.000 0.00 0.00 0.00 4.16
856 2281 1.228367 AAAGAGGCAGGCACACCAG 60.228 57.895 0.00 0.00 39.06 4.00
857 2282 1.708993 AAAGAGGCAGGCACACCAGA 61.709 55.000 0.00 0.00 39.06 3.86
866 2291 2.027745 CAGGCACACCAGACTAAGACAT 60.028 50.000 0.00 0.00 39.06 3.06
872 2297 3.056250 ACACCAGACTAAGACATGAGCAG 60.056 47.826 0.00 0.00 0.00 4.24
873 2298 2.093764 ACCAGACTAAGACATGAGCAGC 60.094 50.000 0.00 0.00 0.00 5.25
874 2299 2.093816 CCAGACTAAGACATGAGCAGCA 60.094 50.000 0.00 0.00 0.00 4.41
875 2300 3.431905 CCAGACTAAGACATGAGCAGCAT 60.432 47.826 0.00 0.00 37.85 3.79
876 2301 4.202192 CCAGACTAAGACATGAGCAGCATA 60.202 45.833 0.00 0.00 34.82 3.14
877 2302 5.511031 CCAGACTAAGACATGAGCAGCATAT 60.511 44.000 0.00 0.00 34.82 1.78
1354 2809 0.179179 GCGGTCGAGGTGTACAGTAC 60.179 60.000 3.49 3.49 0.00 2.73
1355 2810 1.446907 CGGTCGAGGTGTACAGTACT 58.553 55.000 12.07 0.00 0.00 2.73
1356 2811 2.621338 CGGTCGAGGTGTACAGTACTA 58.379 52.381 12.07 0.00 0.00 1.82
1357 2812 2.349886 CGGTCGAGGTGTACAGTACTAC 59.650 54.545 12.07 8.18 0.00 2.73
1365 2831 2.120909 TACAGTACTACCCCGCCGC 61.121 63.158 0.00 0.00 0.00 6.53
1378 2844 0.455972 CCGCCGCTTGTGGTTAATTG 60.456 55.000 2.01 0.00 39.95 2.32
1380 2846 0.038709 GCCGCTTGTGGTTAATTGCA 60.039 50.000 2.01 0.00 0.00 4.08
1381 2847 1.604185 GCCGCTTGTGGTTAATTGCAA 60.604 47.619 0.00 0.00 0.00 4.08
1382 2848 2.327568 CCGCTTGTGGTTAATTGCAAG 58.672 47.619 4.94 9.87 40.68 4.01
1383 2849 2.288152 CCGCTTGTGGTTAATTGCAAGT 60.288 45.455 4.94 4.58 40.09 3.16
1384 2850 3.057876 CCGCTTGTGGTTAATTGCAAGTA 60.058 43.478 4.94 3.30 40.09 2.24
1385 2851 4.380444 CCGCTTGTGGTTAATTGCAAGTAT 60.380 41.667 7.53 0.00 40.09 2.12
1386 2852 4.558470 CGCTTGTGGTTAATTGCAAGTATG 59.442 41.667 7.53 0.00 40.09 2.39
1406 2872 2.358737 CCGGCCAAGCGAAGTTCT 60.359 61.111 2.24 0.00 0.00 3.01
1407 2873 1.079405 CCGGCCAAGCGAAGTTCTA 60.079 57.895 2.24 0.00 0.00 2.10
1408 2874 1.359459 CCGGCCAAGCGAAGTTCTAC 61.359 60.000 2.24 0.00 0.00 2.59
1409 2875 1.683790 CGGCCAAGCGAAGTTCTACG 61.684 60.000 2.24 0.00 0.00 3.51
1488 2954 7.045126 AGCCAGCTATCTAAGTTTACTACTG 57.955 40.000 0.00 0.00 37.12 2.74
1632 3107 2.863739 GGATGAACCGCTTACTTTTGC 58.136 47.619 0.00 0.00 0.00 3.68
1721 3202 6.126185 ACAGGGGCATAAATATTCTAGTGGTT 60.126 38.462 0.00 0.00 0.00 3.67
1724 3205 6.775629 GGGGCATAAATATTCTAGTGGTTCAA 59.224 38.462 0.00 0.00 0.00 2.69
1725 3206 7.255486 GGGGCATAAATATTCTAGTGGTTCAAC 60.255 40.741 0.00 0.00 0.00 3.18
1726 3207 7.352739 GGCATAAATATTCTAGTGGTTCAACG 58.647 38.462 0.00 0.00 0.00 4.10
1729 3210 6.642683 AAATATTCTAGTGGTTCAACGTCG 57.357 37.500 0.00 0.00 0.00 5.12
1738 3219 1.659098 GGTTCAACGTCGATCATGTCC 59.341 52.381 0.00 0.00 0.00 4.02
1812 3293 4.852991 TGAGTATAGGGAGGGGAAAGAT 57.147 45.455 0.00 0.00 0.00 2.40
1868 3350 5.413213 ACATTTGATTTGATTTGGGCATGTG 59.587 36.000 0.00 0.00 0.00 3.21
1869 3351 4.620589 TTGATTTGATTTGGGCATGTGT 57.379 36.364 0.00 0.00 0.00 3.72
1914 3396 9.696917 GTTTGATTGAGTTGAGATTTTGGTAAT 57.303 29.630 0.00 0.00 0.00 1.89
1951 3433 8.481974 TTTGATTTGATTGAGTTAATGCATGG 57.518 30.769 0.00 0.00 0.00 3.66
1971 3453 4.608269 TGGCATGGATTTGGAAAGTATCA 58.392 39.130 0.00 0.00 0.00 2.15
2116 3621 1.618888 CCGAGGGAGGAGGTTAAGACA 60.619 57.143 0.00 0.00 0.00 3.41
2118 3623 2.166664 CGAGGGAGGAGGTTAAGACAAG 59.833 54.545 0.00 0.00 0.00 3.16
2152 3674 8.631797 ACTCCTCTTTAACGGTAGAGATTAATC 58.368 37.037 7.41 7.41 40.24 1.75
2184 3706 5.346181 TTTTTCGACAAAGGGTGGATTTT 57.654 34.783 0.00 0.00 34.00 1.82
2185 3707 6.466885 TTTTTCGACAAAGGGTGGATTTTA 57.533 33.333 0.00 0.00 34.00 1.52
2186 3708 6.658188 TTTTCGACAAAGGGTGGATTTTAT 57.342 33.333 0.00 0.00 34.00 1.40
2187 3709 6.658188 TTTCGACAAAGGGTGGATTTTATT 57.342 33.333 0.00 0.00 34.00 1.40
2188 3710 5.637006 TCGACAAAGGGTGGATTTTATTG 57.363 39.130 0.00 0.00 28.37 1.90
2189 3711 5.317808 TCGACAAAGGGTGGATTTTATTGA 58.682 37.500 0.00 0.00 28.37 2.57
2190 3712 5.770663 TCGACAAAGGGTGGATTTTATTGAA 59.229 36.000 0.00 0.00 28.37 2.69
2191 3713 6.435904 TCGACAAAGGGTGGATTTTATTGAAT 59.564 34.615 0.00 0.00 28.37 2.57
2192 3714 6.751888 CGACAAAGGGTGGATTTTATTGAATC 59.248 38.462 0.00 0.00 35.71 2.52
2193 3715 7.552050 ACAAAGGGTGGATTTTATTGAATCA 57.448 32.000 0.00 0.00 37.69 2.57
2194 3716 8.149631 ACAAAGGGTGGATTTTATTGAATCAT 57.850 30.769 0.00 0.00 37.69 2.45
2195 3717 9.265862 ACAAAGGGTGGATTTTATTGAATCATA 57.734 29.630 0.00 0.00 37.69 2.15
2196 3718 9.754382 CAAAGGGTGGATTTTATTGAATCATAG 57.246 33.333 0.00 0.00 37.69 2.23
2197 3719 9.492730 AAAGGGTGGATTTTATTGAATCATAGT 57.507 29.630 0.00 0.00 37.69 2.12
2198 3720 8.469309 AGGGTGGATTTTATTGAATCATAGTG 57.531 34.615 0.00 0.00 37.69 2.74
2199 3721 8.281531 AGGGTGGATTTTATTGAATCATAGTGA 58.718 33.333 0.00 0.00 37.69 3.41
2200 3722 8.912988 GGGTGGATTTTATTGAATCATAGTGAA 58.087 33.333 0.00 0.00 37.69 3.18
2201 3723 9.956720 GGTGGATTTTATTGAATCATAGTGAAG 57.043 33.333 0.00 0.00 37.69 3.02
2202 3724 9.455847 GTGGATTTTATTGAATCATAGTGAAGC 57.544 33.333 0.00 0.00 37.69 3.86
2203 3725 9.187996 TGGATTTTATTGAATCATAGTGAAGCA 57.812 29.630 0.00 0.00 37.69 3.91
2209 3731 5.746307 TGAATCATAGTGAAGCATCAAGC 57.254 39.130 0.00 0.00 46.19 4.01
2221 3743 2.785679 GCATCAAGCGGATACAAACAC 58.214 47.619 0.00 0.00 33.95 3.32
2222 3744 2.161410 GCATCAAGCGGATACAAACACA 59.839 45.455 0.00 0.00 33.95 3.72
2223 3745 3.365868 GCATCAAGCGGATACAAACACAA 60.366 43.478 0.00 0.00 33.95 3.33
2224 3746 4.675146 GCATCAAGCGGATACAAACACAAT 60.675 41.667 0.00 0.00 33.95 2.71
2225 3747 4.418013 TCAAGCGGATACAAACACAATG 57.582 40.909 0.00 0.00 0.00 2.82
2226 3748 4.068599 TCAAGCGGATACAAACACAATGA 58.931 39.130 0.00 0.00 0.00 2.57
2227 3749 4.517075 TCAAGCGGATACAAACACAATGAA 59.483 37.500 0.00 0.00 0.00 2.57
2228 3750 5.182950 TCAAGCGGATACAAACACAATGAAT 59.817 36.000 0.00 0.00 0.00 2.57
2229 3751 6.372937 TCAAGCGGATACAAACACAATGAATA 59.627 34.615 0.00 0.00 0.00 1.75
2230 3752 6.119144 AGCGGATACAAACACAATGAATAC 57.881 37.500 0.00 0.00 0.00 1.89
2231 3753 5.645929 AGCGGATACAAACACAATGAATACA 59.354 36.000 0.00 0.00 0.00 2.29
2232 3754 5.737290 GCGGATACAAACACAATGAATACAC 59.263 40.000 0.00 0.00 0.00 2.90
2233 3755 6.621812 GCGGATACAAACACAATGAATACACA 60.622 38.462 0.00 0.00 0.00 3.72
2234 3756 6.740905 CGGATACAAACACAATGAATACACAC 59.259 38.462 0.00 0.00 0.00 3.82
2235 3757 7.027161 GGATACAAACACAATGAATACACACC 58.973 38.462 0.00 0.00 0.00 4.16
2236 3758 5.195001 ACAAACACAATGAATACACACCC 57.805 39.130 0.00 0.00 0.00 4.61
2237 3759 4.225984 CAAACACAATGAATACACACCCG 58.774 43.478 0.00 0.00 0.00 5.28
2238 3760 2.432444 ACACAATGAATACACACCCGG 58.568 47.619 0.00 0.00 0.00 5.73
2239 3761 1.132262 CACAATGAATACACACCCGGC 59.868 52.381 0.00 0.00 0.00 6.13
2240 3762 0.738389 CAATGAATACACACCCGGCC 59.262 55.000 0.00 0.00 0.00 6.13
2241 3763 0.623723 AATGAATACACACCCGGCCT 59.376 50.000 0.00 0.00 0.00 5.19
2242 3764 0.180406 ATGAATACACACCCGGCCTC 59.820 55.000 0.00 0.00 0.00 4.70
2243 3765 0.907704 TGAATACACACCCGGCCTCT 60.908 55.000 0.00 0.00 0.00 3.69
2244 3766 0.462047 GAATACACACCCGGCCTCTG 60.462 60.000 0.00 0.00 0.00 3.35
2245 3767 2.536997 AATACACACCCGGCCTCTGC 62.537 60.000 0.00 0.00 0.00 4.26
2247 3769 4.415150 CACACCCGGCCTCTGCAT 62.415 66.667 0.00 0.00 40.13 3.96
2248 3770 2.687200 ACACCCGGCCTCTGCATA 60.687 61.111 0.00 0.00 40.13 3.14
2249 3771 2.297895 ACACCCGGCCTCTGCATAA 61.298 57.895 0.00 0.00 40.13 1.90
2250 3772 1.819632 CACCCGGCCTCTGCATAAC 60.820 63.158 0.00 0.00 40.13 1.89
2251 3773 1.995626 ACCCGGCCTCTGCATAACT 60.996 57.895 0.00 0.00 40.13 2.24
2252 3774 0.689745 ACCCGGCCTCTGCATAACTA 60.690 55.000 0.00 0.00 40.13 2.24
2253 3775 0.468226 CCCGGCCTCTGCATAACTAA 59.532 55.000 0.00 0.00 40.13 2.24
2254 3776 1.541233 CCCGGCCTCTGCATAACTAAG 60.541 57.143 0.00 0.00 40.13 2.18
2255 3777 1.412710 CCGGCCTCTGCATAACTAAGA 59.587 52.381 0.00 0.00 40.13 2.10
2256 3778 2.037772 CCGGCCTCTGCATAACTAAGAT 59.962 50.000 0.00 0.00 40.13 2.40
2257 3779 3.062763 CGGCCTCTGCATAACTAAGATG 58.937 50.000 0.00 0.00 40.13 2.90
2266 3788 4.542662 CATAACTAAGATGCACACAGCC 57.457 45.455 0.00 0.00 44.83 4.85
2267 3789 2.566833 AACTAAGATGCACACAGCCA 57.433 45.000 0.00 0.00 44.83 4.75
2268 3790 2.566833 ACTAAGATGCACACAGCCAA 57.433 45.000 0.00 0.00 44.83 4.52
2269 3791 2.154462 ACTAAGATGCACACAGCCAAC 58.846 47.619 0.00 0.00 44.83 3.77
2270 3792 2.153645 CTAAGATGCACACAGCCAACA 58.846 47.619 0.00 0.00 44.83 3.33
2271 3793 0.670162 AAGATGCACACAGCCAACAC 59.330 50.000 0.00 0.00 44.83 3.32
2272 3794 1.174712 AGATGCACACAGCCAACACC 61.175 55.000 0.00 0.00 44.83 4.16
2273 3795 1.454572 GATGCACACAGCCAACACCA 61.455 55.000 0.00 0.00 44.83 4.17
2274 3796 1.042003 ATGCACACAGCCAACACCAA 61.042 50.000 0.00 0.00 44.83 3.67
2275 3797 1.226945 GCACACAGCCAACACCAAC 60.227 57.895 0.00 0.00 37.23 3.77
2276 3798 1.943116 GCACACAGCCAACACCAACA 61.943 55.000 0.00 0.00 37.23 3.33
2277 3799 0.179140 CACACAGCCAACACCAACAC 60.179 55.000 0.00 0.00 0.00 3.32
2278 3800 0.610509 ACACAGCCAACACCAACACA 60.611 50.000 0.00 0.00 0.00 3.72
2279 3801 0.746063 CACAGCCAACACCAACACAT 59.254 50.000 0.00 0.00 0.00 3.21
2280 3802 1.952990 CACAGCCAACACCAACACATA 59.047 47.619 0.00 0.00 0.00 2.29
2281 3803 2.360483 CACAGCCAACACCAACACATAA 59.640 45.455 0.00 0.00 0.00 1.90
2282 3804 3.027412 ACAGCCAACACCAACACATAAA 58.973 40.909 0.00 0.00 0.00 1.40
2283 3805 3.449018 ACAGCCAACACCAACACATAAAA 59.551 39.130 0.00 0.00 0.00 1.52
2284 3806 4.100808 ACAGCCAACACCAACACATAAAAT 59.899 37.500 0.00 0.00 0.00 1.82
2285 3807 4.685628 CAGCCAACACCAACACATAAAATC 59.314 41.667 0.00 0.00 0.00 2.17
2286 3808 3.993736 GCCAACACCAACACATAAAATCC 59.006 43.478 0.00 0.00 0.00 3.01
2287 3809 4.565022 CCAACACCAACACATAAAATCCC 58.435 43.478 0.00 0.00 0.00 3.85
2288 3810 4.039730 CCAACACCAACACATAAAATCCCA 59.960 41.667 0.00 0.00 0.00 4.37
2289 3811 5.279910 CCAACACCAACACATAAAATCCCAT 60.280 40.000 0.00 0.00 0.00 4.00
2290 3812 5.659440 ACACCAACACATAAAATCCCATC 57.341 39.130 0.00 0.00 0.00 3.51
2291 3813 5.083122 ACACCAACACATAAAATCCCATCA 58.917 37.500 0.00 0.00 0.00 3.07
2292 3814 5.185635 ACACCAACACATAAAATCCCATCAG 59.814 40.000 0.00 0.00 0.00 2.90
2293 3815 4.160252 ACCAACACATAAAATCCCATCAGC 59.840 41.667 0.00 0.00 0.00 4.26
2294 3816 4.160065 CCAACACATAAAATCCCATCAGCA 59.840 41.667 0.00 0.00 0.00 4.41
2295 3817 5.337410 CCAACACATAAAATCCCATCAGCAA 60.337 40.000 0.00 0.00 0.00 3.91
2296 3818 5.999205 ACACATAAAATCCCATCAGCAAA 57.001 34.783 0.00 0.00 0.00 3.68
2297 3819 6.549433 ACACATAAAATCCCATCAGCAAAT 57.451 33.333 0.00 0.00 0.00 2.32
2298 3820 7.658525 ACACATAAAATCCCATCAGCAAATA 57.341 32.000 0.00 0.00 0.00 1.40
2299 3821 7.719483 ACACATAAAATCCCATCAGCAAATAG 58.281 34.615 0.00 0.00 0.00 1.73
2300 3822 6.643770 CACATAAAATCCCATCAGCAAATAGC 59.356 38.462 0.00 0.00 46.19 2.97
2316 3838 6.903419 GCAAATAGCAAAGTCATATAGGACC 58.097 40.000 13.67 0.00 44.79 4.46
2317 3839 6.486657 GCAAATAGCAAAGTCATATAGGACCA 59.513 38.462 13.67 0.00 44.79 4.02
2318 3840 7.013274 GCAAATAGCAAAGTCATATAGGACCAA 59.987 37.037 13.67 0.00 44.79 3.67
2319 3841 8.902806 CAAATAGCAAAGTCATATAGGACCAAA 58.097 33.333 13.67 0.00 38.59 3.28
2320 3842 8.682936 AATAGCAAAGTCATATAGGACCAAAG 57.317 34.615 13.67 3.68 38.59 2.77
2321 3843 4.884164 AGCAAAGTCATATAGGACCAAAGC 59.116 41.667 13.67 12.39 38.59 3.51
2322 3844 4.884164 GCAAAGTCATATAGGACCAAAGCT 59.116 41.667 13.67 0.00 38.59 3.74
2323 3845 6.055588 GCAAAGTCATATAGGACCAAAGCTA 58.944 40.000 13.67 0.00 38.59 3.32
2324 3846 6.712547 GCAAAGTCATATAGGACCAAAGCTAT 59.287 38.462 13.67 0.00 38.59 2.97
2325 3847 7.308229 GCAAAGTCATATAGGACCAAAGCTATG 60.308 40.741 13.67 3.78 38.59 2.23
2326 3848 5.799213 AGTCATATAGGACCAAAGCTATGC 58.201 41.667 13.67 0.00 38.59 3.14
2327 3849 5.307976 AGTCATATAGGACCAAAGCTATGCA 59.692 40.000 13.67 0.00 38.59 3.96
2328 3850 6.013032 AGTCATATAGGACCAAAGCTATGCAT 60.013 38.462 13.67 3.79 38.59 3.96
2329 3851 7.180946 AGTCATATAGGACCAAAGCTATGCATA 59.819 37.037 13.67 6.20 38.59 3.14
2330 3852 7.824289 GTCATATAGGACCAAAGCTATGCATAA 59.176 37.037 8.00 0.00 0.00 1.90
2331 3853 8.043113 TCATATAGGACCAAAGCTATGCATAAG 58.957 37.037 8.00 3.59 0.00 1.73
2332 3854 3.217626 AGGACCAAAGCTATGCATAAGC 58.782 45.455 8.00 12.88 40.40 3.09
2333 3855 2.031682 GGACCAAAGCTATGCATAAGCG 60.032 50.000 8.00 0.00 44.87 4.68
2334 3856 1.949525 ACCAAAGCTATGCATAAGCGG 59.050 47.619 8.00 11.73 44.87 5.52
2335 3857 1.267806 CCAAAGCTATGCATAAGCGGG 59.732 52.381 8.00 12.69 44.87 6.13
2336 3858 1.267806 CAAAGCTATGCATAAGCGGGG 59.732 52.381 8.00 5.16 44.87 5.73
2337 3859 0.764890 AAGCTATGCATAAGCGGGGA 59.235 50.000 8.00 0.00 44.87 4.81
2338 3860 0.764890 AGCTATGCATAAGCGGGGAA 59.235 50.000 8.00 0.00 44.87 3.97
2339 3861 1.142870 AGCTATGCATAAGCGGGGAAA 59.857 47.619 8.00 0.00 44.87 3.13
2340 3862 1.953686 GCTATGCATAAGCGGGGAAAA 59.046 47.619 8.00 0.00 46.23 2.29
2341 3863 2.360801 GCTATGCATAAGCGGGGAAAAA 59.639 45.455 8.00 0.00 46.23 1.94
2342 3864 2.959507 ATGCATAAGCGGGGAAAAAC 57.040 45.000 0.00 0.00 46.23 2.43
2343 3865 1.621992 TGCATAAGCGGGGAAAAACA 58.378 45.000 0.00 0.00 46.23 2.83
2344 3866 2.175202 TGCATAAGCGGGGAAAAACAT 58.825 42.857 0.00 0.00 46.23 2.71
2345 3867 2.165437 TGCATAAGCGGGGAAAAACATC 59.835 45.455 0.00 0.00 46.23 3.06
2346 3868 2.165437 GCATAAGCGGGGAAAAACATCA 59.835 45.455 0.00 0.00 0.00 3.07
2347 3869 3.367910 GCATAAGCGGGGAAAAACATCAA 60.368 43.478 0.00 0.00 0.00 2.57
2348 3870 4.815269 CATAAGCGGGGAAAAACATCAAA 58.185 39.130 0.00 0.00 0.00 2.69
2349 3871 3.385193 AAGCGGGGAAAAACATCAAAG 57.615 42.857 0.00 0.00 0.00 2.77
2350 3872 1.000843 AGCGGGGAAAAACATCAAAGC 59.999 47.619 0.00 0.00 0.00 3.51
2351 3873 1.696988 CGGGGAAAAACATCAAAGCG 58.303 50.000 0.00 0.00 0.00 4.68
2352 3874 1.268352 CGGGGAAAAACATCAAAGCGA 59.732 47.619 0.00 0.00 0.00 4.93
2353 3875 2.287909 CGGGGAAAAACATCAAAGCGAA 60.288 45.455 0.00 0.00 0.00 4.70
2354 3876 3.057019 GGGGAAAAACATCAAAGCGAAC 58.943 45.455 0.00 0.00 0.00 3.95
2355 3877 3.491792 GGGGAAAAACATCAAAGCGAACA 60.492 43.478 0.00 0.00 0.00 3.18
2356 3878 4.116238 GGGAAAAACATCAAAGCGAACAA 58.884 39.130 0.00 0.00 0.00 2.83
2357 3879 4.568760 GGGAAAAACATCAAAGCGAACAAA 59.431 37.500 0.00 0.00 0.00 2.83
2358 3880 5.236263 GGGAAAAACATCAAAGCGAACAAAT 59.764 36.000 0.00 0.00 0.00 2.32
2359 3881 6.238347 GGGAAAAACATCAAAGCGAACAAATT 60.238 34.615 0.00 0.00 0.00 1.82
2360 3882 7.042389 GGGAAAAACATCAAAGCGAACAAATTA 60.042 33.333 0.00 0.00 0.00 1.40
2361 3883 8.003784 GGAAAAACATCAAAGCGAACAAATTAG 58.996 33.333 0.00 0.00 0.00 1.73
2362 3884 6.452244 AAACATCAAAGCGAACAAATTAGC 57.548 33.333 0.00 0.00 36.75 3.09
2363 3885 5.119931 ACATCAAAGCGAACAAATTAGCA 57.880 34.783 0.00 0.00 38.79 3.49
2364 3886 5.527951 ACATCAAAGCGAACAAATTAGCAA 58.472 33.333 0.00 0.00 38.79 3.91
2365 3887 6.158598 ACATCAAAGCGAACAAATTAGCAAT 58.841 32.000 0.00 0.00 38.79 3.56
2366 3888 6.308766 ACATCAAAGCGAACAAATTAGCAATC 59.691 34.615 0.00 0.00 38.79 2.67
2367 3889 4.851014 TCAAAGCGAACAAATTAGCAATCG 59.149 37.500 0.00 0.00 38.79 3.34
2368 3890 4.678509 AAGCGAACAAATTAGCAATCGA 57.321 36.364 0.00 0.00 38.79 3.59
2369 3891 4.003519 AGCGAACAAATTAGCAATCGAC 57.996 40.909 0.00 0.00 38.79 4.20
2370 3892 3.435327 AGCGAACAAATTAGCAATCGACA 59.565 39.130 0.00 0.00 38.79 4.35
2371 3893 4.083537 AGCGAACAAATTAGCAATCGACAA 60.084 37.500 0.00 0.00 38.79 3.18
2372 3894 4.615121 GCGAACAAATTAGCAATCGACAAA 59.385 37.500 0.00 0.00 36.53 2.83
2373 3895 5.441485 GCGAACAAATTAGCAATCGACAAAC 60.441 40.000 0.00 0.00 36.53 2.93
2374 3896 5.851177 CGAACAAATTAGCAATCGACAAACT 59.149 36.000 0.00 0.00 32.38 2.66
2375 3897 7.012943 CGAACAAATTAGCAATCGACAAACTA 58.987 34.615 0.00 0.00 32.38 2.24
2376 3898 7.006210 CGAACAAATTAGCAATCGACAAACTAC 59.994 37.037 0.00 0.00 32.38 2.73
2377 3899 7.197071 ACAAATTAGCAATCGACAAACTACA 57.803 32.000 0.00 0.00 0.00 2.74
2378 3900 7.644490 ACAAATTAGCAATCGACAAACTACAA 58.356 30.769 0.00 0.00 0.00 2.41
2379 3901 8.296713 ACAAATTAGCAATCGACAAACTACAAT 58.703 29.630 0.00 0.00 0.00 2.71
2380 3902 9.767684 CAAATTAGCAATCGACAAACTACAATA 57.232 29.630 0.00 0.00 0.00 1.90
2383 3905 9.935682 ATTAGCAATCGACAAACTACAATAATG 57.064 29.630 0.00 0.00 0.00 1.90
2384 3906 7.609760 AGCAATCGACAAACTACAATAATGA 57.390 32.000 0.00 0.00 0.00 2.57
2385 3907 7.464358 AGCAATCGACAAACTACAATAATGAC 58.536 34.615 0.00 0.00 0.00 3.06
2386 3908 6.687105 GCAATCGACAAACTACAATAATGACC 59.313 38.462 0.00 0.00 0.00 4.02
2387 3909 7.625395 GCAATCGACAAACTACAATAATGACCA 60.625 37.037 0.00 0.00 0.00 4.02
2388 3910 8.397906 CAATCGACAAACTACAATAATGACCAT 58.602 33.333 0.00 0.00 0.00 3.55
2389 3911 7.915293 TCGACAAACTACAATAATGACCATT 57.085 32.000 0.64 0.64 34.93 3.16
2404 3926 1.058284 CCATTAAATGGGGGCCATGG 58.942 55.000 7.63 7.63 44.40 3.66
2405 3927 1.695340 CCATTAAATGGGGGCCATGGT 60.695 52.381 14.67 0.00 44.40 3.55
2407 3929 2.765689 TTAAATGGGGGCCATGGTAG 57.234 50.000 14.67 0.00 44.40 3.18
2414 3936 1.645402 GGGGCCATGGTAGTGATGGT 61.645 60.000 14.67 0.00 42.25 3.55
2419 3941 1.202533 CCATGGTAGTGATGGTCGGTC 60.203 57.143 2.57 0.00 36.38 4.79
2429 3951 0.984230 ATGGTCGGTCTGGTTGTCAT 59.016 50.000 0.00 0.00 0.00 3.06
2433 3956 1.459592 GTCGGTCTGGTTGTCATTTCG 59.540 52.381 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.349663 TGAAAACAGAAACACGACCTTG 57.650 40.909 0.00 0.00 0.00 3.61
1 2 5.576447 AATGAAAACAGAAACACGACCTT 57.424 34.783 0.00 0.00 0.00 3.50
2 3 5.449999 GGAAATGAAAACAGAAACACGACCT 60.450 40.000 0.00 0.00 0.00 3.85
3 4 4.738252 GGAAATGAAAACAGAAACACGACC 59.262 41.667 0.00 0.00 0.00 4.79
4 5 5.229260 GTGGAAATGAAAACAGAAACACGAC 59.771 40.000 0.00 0.00 0.00 4.34
5 6 5.124776 AGTGGAAATGAAAACAGAAACACGA 59.875 36.000 0.00 0.00 0.00 4.35
6 7 5.229887 CAGTGGAAATGAAAACAGAAACACG 59.770 40.000 0.00 0.00 30.28 4.49
7 8 5.005682 GCAGTGGAAATGAAAACAGAAACAC 59.994 40.000 0.00 0.00 30.28 3.32
8 9 5.108517 GCAGTGGAAATGAAAACAGAAACA 58.891 37.500 0.00 0.00 30.28 2.83
9 10 4.507756 GGCAGTGGAAATGAAAACAGAAAC 59.492 41.667 0.00 0.00 30.28 2.78
10 11 4.692228 GGCAGTGGAAATGAAAACAGAAA 58.308 39.130 0.00 0.00 30.28 2.52
11 12 3.243367 CGGCAGTGGAAATGAAAACAGAA 60.243 43.478 0.00 0.00 30.28 3.02
12 13 2.293122 CGGCAGTGGAAATGAAAACAGA 59.707 45.455 0.00 0.00 30.28 3.41
13 14 2.034558 ACGGCAGTGGAAATGAAAACAG 59.965 45.455 0.00 0.00 30.28 3.16
14 15 2.028130 ACGGCAGTGGAAATGAAAACA 58.972 42.857 0.00 0.00 30.28 2.83
15 16 2.793278 ACGGCAGTGGAAATGAAAAC 57.207 45.000 0.00 0.00 30.28 2.43
16 17 3.118956 ACAAACGGCAGTGGAAATGAAAA 60.119 39.130 0.00 0.00 30.28 2.29
17 18 2.428890 ACAAACGGCAGTGGAAATGAAA 59.571 40.909 0.00 0.00 30.28 2.69
18 19 2.028130 ACAAACGGCAGTGGAAATGAA 58.972 42.857 0.00 0.00 30.28 2.57
19 20 1.686355 ACAAACGGCAGTGGAAATGA 58.314 45.000 0.00 0.00 30.28 2.57
20 21 2.223688 TGAACAAACGGCAGTGGAAATG 60.224 45.455 0.00 0.00 33.24 2.32
21 22 2.028130 TGAACAAACGGCAGTGGAAAT 58.972 42.857 0.00 0.00 0.00 2.17
22 23 1.464734 TGAACAAACGGCAGTGGAAA 58.535 45.000 0.00 0.00 0.00 3.13
23 24 1.686355 ATGAACAAACGGCAGTGGAA 58.314 45.000 0.00 0.00 0.00 3.53
24 25 1.606668 GAATGAACAAACGGCAGTGGA 59.393 47.619 0.00 0.00 0.00 4.02
25 26 1.662876 CGAATGAACAAACGGCAGTGG 60.663 52.381 0.00 0.00 0.00 4.00
26 27 1.002900 ACGAATGAACAAACGGCAGTG 60.003 47.619 0.00 0.00 0.00 3.66
27 28 1.263217 GACGAATGAACAAACGGCAGT 59.737 47.619 0.00 0.00 33.73 4.40
28 29 1.262950 TGACGAATGAACAAACGGCAG 59.737 47.619 7.98 0.00 38.85 4.85
29 30 1.300481 TGACGAATGAACAAACGGCA 58.700 45.000 7.98 7.98 41.47 5.69
30 31 2.241722 CATGACGAATGAACAAACGGC 58.758 47.619 0.00 0.00 38.72 5.68
31 32 2.095768 AGCATGACGAATGAACAAACGG 60.096 45.455 0.00 0.00 38.72 4.44
32 33 3.187478 AGCATGACGAATGAACAAACG 57.813 42.857 0.00 0.00 38.72 3.60
33 34 5.888412 AAAAGCATGACGAATGAACAAAC 57.112 34.783 0.00 0.00 38.72 2.93
34 35 5.629020 GCTAAAAGCATGACGAATGAACAAA 59.371 36.000 0.00 0.00 41.89 2.83
35 36 5.048782 AGCTAAAAGCATGACGAATGAACAA 60.049 36.000 0.00 0.00 45.56 2.83
36 37 4.455533 AGCTAAAAGCATGACGAATGAACA 59.544 37.500 0.00 0.00 45.56 3.18
37 38 4.790140 CAGCTAAAAGCATGACGAATGAAC 59.210 41.667 0.00 0.00 45.56 3.18
38 39 4.142622 CCAGCTAAAAGCATGACGAATGAA 60.143 41.667 0.00 0.00 45.56 2.57
39 40 3.374988 CCAGCTAAAAGCATGACGAATGA 59.625 43.478 0.00 0.00 45.56 2.57
40 41 3.488047 CCCAGCTAAAAGCATGACGAATG 60.488 47.826 0.00 0.00 45.56 2.67
41 42 2.684881 CCCAGCTAAAAGCATGACGAAT 59.315 45.455 0.00 0.00 45.56 3.34
42 43 2.083774 CCCAGCTAAAAGCATGACGAA 58.916 47.619 0.00 0.00 45.56 3.85
43 44 1.277842 TCCCAGCTAAAAGCATGACGA 59.722 47.619 0.00 0.00 45.56 4.20
44 45 1.398390 GTCCCAGCTAAAAGCATGACG 59.602 52.381 0.00 0.00 45.56 4.35
45 46 2.421424 CAGTCCCAGCTAAAAGCATGAC 59.579 50.000 0.00 4.84 45.56 3.06
46 47 2.618816 CCAGTCCCAGCTAAAAGCATGA 60.619 50.000 0.00 0.00 45.56 3.07
47 48 1.747355 CCAGTCCCAGCTAAAAGCATG 59.253 52.381 1.22 0.00 45.56 4.06
48 49 1.341383 CCCAGTCCCAGCTAAAAGCAT 60.341 52.381 1.22 0.00 45.56 3.79
49 50 0.038166 CCCAGTCCCAGCTAAAAGCA 59.962 55.000 1.22 0.00 45.56 3.91
50 51 0.328258 TCCCAGTCCCAGCTAAAAGC 59.672 55.000 0.00 0.00 42.84 3.51
51 52 1.630878 AGTCCCAGTCCCAGCTAAAAG 59.369 52.381 0.00 0.00 0.00 2.27
52 53 1.628846 GAGTCCCAGTCCCAGCTAAAA 59.371 52.381 0.00 0.00 0.00 1.52
53 54 1.203313 AGAGTCCCAGTCCCAGCTAAA 60.203 52.381 0.00 0.00 0.00 1.85
54 55 0.413832 AGAGTCCCAGTCCCAGCTAA 59.586 55.000 0.00 0.00 0.00 3.09
55 56 0.324738 CAGAGTCCCAGTCCCAGCTA 60.325 60.000 0.00 0.00 0.00 3.32
56 57 1.611851 CAGAGTCCCAGTCCCAGCT 60.612 63.158 0.00 0.00 0.00 4.24
57 58 2.664081 CCAGAGTCCCAGTCCCAGC 61.664 68.421 0.00 0.00 0.00 4.85
58 59 1.992277 CCCAGAGTCCCAGTCCCAG 60.992 68.421 0.00 0.00 0.00 4.45
59 60 2.122729 CCCAGAGTCCCAGTCCCA 59.877 66.667 0.00 0.00 0.00 4.37
60 61 1.687493 CTCCCAGAGTCCCAGTCCC 60.687 68.421 0.00 0.00 0.00 4.46
61 62 1.079438 ACTCCCAGAGTCCCAGTCC 59.921 63.158 0.00 0.00 38.71 3.85
62 63 1.893919 GCACTCCCAGAGTCCCAGTC 61.894 65.000 0.00 0.00 41.37 3.51
63 64 1.915769 GCACTCCCAGAGTCCCAGT 60.916 63.158 0.00 0.00 41.37 4.00
64 65 1.897225 CTGCACTCCCAGAGTCCCAG 61.897 65.000 0.00 1.58 41.37 4.45
65 66 1.915266 CTGCACTCCCAGAGTCCCA 60.915 63.158 0.00 0.00 41.37 4.37
66 67 1.915769 ACTGCACTCCCAGAGTCCC 60.916 63.158 0.00 0.00 41.37 4.46
67 68 1.294780 CACTGCACTCCCAGAGTCC 59.705 63.158 0.00 0.00 41.37 3.85
68 69 1.294780 CCACTGCACTCCCAGAGTC 59.705 63.158 0.00 0.00 41.37 3.36
69 70 0.178932 TACCACTGCACTCCCAGAGT 60.179 55.000 0.00 0.00 44.44 3.24
70 71 0.534412 CTACCACTGCACTCCCAGAG 59.466 60.000 0.00 0.00 36.67 3.35
71 72 0.114364 TCTACCACTGCACTCCCAGA 59.886 55.000 0.00 0.00 36.67 3.86
72 73 0.534412 CTCTACCACTGCACTCCCAG 59.466 60.000 0.00 0.00 38.78 4.45
73 74 0.904865 CCTCTACCACTGCACTCCCA 60.905 60.000 0.00 0.00 0.00 4.37
74 75 0.614979 TCCTCTACCACTGCACTCCC 60.615 60.000 0.00 0.00 0.00 4.30
75 76 0.533032 GTCCTCTACCACTGCACTCC 59.467 60.000 0.00 0.00 0.00 3.85
76 77 0.171455 CGTCCTCTACCACTGCACTC 59.829 60.000 0.00 0.00 0.00 3.51
77 78 0.251209 TCGTCCTCTACCACTGCACT 60.251 55.000 0.00 0.00 0.00 4.40
78 79 0.171455 CTCGTCCTCTACCACTGCAC 59.829 60.000 0.00 0.00 0.00 4.57
79 80 0.037734 TCTCGTCCTCTACCACTGCA 59.962 55.000 0.00 0.00 0.00 4.41
80 81 0.452585 GTCTCGTCCTCTACCACTGC 59.547 60.000 0.00 0.00 0.00 4.40
81 82 0.727970 CGTCTCGTCCTCTACCACTG 59.272 60.000 0.00 0.00 0.00 3.66
82 83 0.612229 TCGTCTCGTCCTCTACCACT 59.388 55.000 0.00 0.00 0.00 4.00
83 84 1.008329 CTCGTCTCGTCCTCTACCAC 58.992 60.000 0.00 0.00 0.00 4.16
84 85 0.612229 ACTCGTCTCGTCCTCTACCA 59.388 55.000 0.00 0.00 0.00 3.25
85 86 1.665169 GAACTCGTCTCGTCCTCTACC 59.335 57.143 0.00 0.00 0.00 3.18
86 87 1.665169 GGAACTCGTCTCGTCCTCTAC 59.335 57.143 0.00 0.00 0.00 2.59
87 88 1.406614 GGGAACTCGTCTCGTCCTCTA 60.407 57.143 0.00 0.00 0.00 2.43
88 89 0.677414 GGGAACTCGTCTCGTCCTCT 60.677 60.000 0.00 0.00 0.00 3.69
89 90 0.677414 AGGGAACTCGTCTCGTCCTC 60.677 60.000 0.00 0.00 32.90 3.71
90 91 0.961358 CAGGGAACTCGTCTCGTCCT 60.961 60.000 0.00 0.00 40.21 3.85
91 92 1.507174 CAGGGAACTCGTCTCGTCC 59.493 63.158 0.00 0.00 40.21 4.79
92 93 1.242665 ACCAGGGAACTCGTCTCGTC 61.243 60.000 0.00 0.00 40.21 4.20
93 94 1.228490 ACCAGGGAACTCGTCTCGT 60.228 57.895 0.00 0.00 40.21 4.18
94 95 1.507174 GACCAGGGAACTCGTCTCG 59.493 63.158 0.00 0.00 44.19 4.04
95 96 1.507174 CGACCAGGGAACTCGTCTC 59.493 63.158 0.00 0.00 45.23 3.36
96 97 2.637383 GCGACCAGGGAACTCGTCT 61.637 63.158 0.00 0.00 45.23 4.18
97 98 2.126031 GCGACCAGGGAACTCGTC 60.126 66.667 0.00 0.00 44.13 4.20
98 99 1.827399 ATTGCGACCAGGGAACTCGT 61.827 55.000 0.00 0.00 40.21 4.18
99 100 1.079127 ATTGCGACCAGGGAACTCG 60.079 57.895 0.00 0.00 40.21 4.18
100 101 0.321653 ACATTGCGACCAGGGAACTC 60.322 55.000 0.00 0.00 40.21 3.01
101 102 0.110486 AACATTGCGACCAGGGAACT 59.890 50.000 0.00 0.00 46.44 3.01
125 126 3.943671 TTCAAGAGGTTCCCAGAACAA 57.056 42.857 9.50 0.00 0.00 2.83
152 153 7.120285 ACAGATTACCAATGTTCATCTCACTTG 59.880 37.037 0.00 0.00 0.00 3.16
159 160 6.046593 TCGGTACAGATTACCAATGTTCATC 58.953 40.000 0.00 0.00 37.44 2.92
160 161 5.984725 TCGGTACAGATTACCAATGTTCAT 58.015 37.500 0.00 0.00 37.44 2.57
195 196 0.459899 ATTACTCTCCATGACGCGCA 59.540 50.000 5.73 5.73 0.00 6.09
196 197 1.132588 GATTACTCTCCATGACGCGC 58.867 55.000 5.73 0.00 0.00 6.86
197 198 2.656085 GAGATTACTCTCCATGACGCG 58.344 52.381 3.53 3.53 41.86 6.01
251 255 3.291383 CGGGCCGCAAGTTGGAAA 61.291 61.111 15.42 0.00 0.00 3.13
259 263 3.170490 AAATTTTGCCGGGCCGCAA 62.170 52.632 23.20 24.19 46.72 4.85
260 264 3.581687 GAAATTTTGCCGGGCCGCA 62.582 57.895 23.20 19.57 36.85 5.69
261 265 2.779951 AAGAAATTTTGCCGGGCCGC 62.780 55.000 23.20 16.94 0.00 6.53
262 266 1.013524 CAAGAAATTTTGCCGGGCCG 61.014 55.000 21.46 21.46 0.00 6.13
263 267 1.298157 GCAAGAAATTTTGCCGGGCC 61.298 55.000 17.97 0.00 45.93 5.80
264 268 2.161831 GCAAGAAATTTTGCCGGGC 58.838 52.632 13.32 13.32 45.93 6.13
270 274 2.845363 AGCTGGGGCAAGAAATTTTG 57.155 45.000 0.00 0.00 41.70 2.44
271 275 6.619329 TTATTAGCTGGGGCAAGAAATTTT 57.381 33.333 0.00 0.00 41.70 1.82
272 276 6.813293 ATTATTAGCTGGGGCAAGAAATTT 57.187 33.333 0.00 0.00 41.70 1.82
273 277 6.813293 AATTATTAGCTGGGGCAAGAAATT 57.187 33.333 0.00 0.00 41.70 1.82
274 278 7.297614 TCTAATTATTAGCTGGGGCAAGAAAT 58.702 34.615 7.08 0.00 41.70 2.17
275 279 6.668645 TCTAATTATTAGCTGGGGCAAGAAA 58.331 36.000 7.08 0.00 41.70 2.52
276 280 6.101150 TCTCTAATTATTAGCTGGGGCAAGAA 59.899 38.462 7.08 0.00 41.70 2.52
277 281 5.606749 TCTCTAATTATTAGCTGGGGCAAGA 59.393 40.000 7.08 0.47 41.70 3.02
294 298 5.422214 TCTTTTCCCTCGCTTTCTCTAAT 57.578 39.130 0.00 0.00 0.00 1.73
295 299 4.884668 TCTTTTCCCTCGCTTTCTCTAA 57.115 40.909 0.00 0.00 0.00 2.10
296 300 4.884668 TTCTTTTCCCTCGCTTTCTCTA 57.115 40.909 0.00 0.00 0.00 2.43
310 327 7.602644 AGGAAGGTGTTTTTGTTCTTTCTTTTC 59.397 33.333 0.00 0.00 0.00 2.29
327 344 1.700186 GGGAGTCAAAGAGGAAGGTGT 59.300 52.381 0.00 0.00 0.00 4.16
366 383 1.133668 ACCTTTTCTTGCAGTCAGCCT 60.134 47.619 0.00 0.00 44.83 4.58
367 384 1.268079 GACCTTTTCTTGCAGTCAGCC 59.732 52.381 0.00 0.00 44.83 4.85
369 386 4.480386 GAAGACCTTTTCTTGCAGTCAG 57.520 45.455 3.26 0.00 45.24 3.51
402 419 1.079621 ACATGGGGGTAGACGGTCA 59.920 57.895 11.27 0.00 0.00 4.02
412 429 2.157640 TATTTTCAGGCACATGGGGG 57.842 50.000 0.00 0.00 0.00 5.40
436 453 2.738213 AAGTGGCCGAAGCAGAGGTG 62.738 60.000 0.00 0.00 42.56 4.00
437 454 2.456287 GAAGTGGCCGAAGCAGAGGT 62.456 60.000 0.00 0.00 42.56 3.85
439 456 0.739112 GAGAAGTGGCCGAAGCAGAG 60.739 60.000 0.00 0.00 42.56 3.35
442 459 2.347490 GGAGAAGTGGCCGAAGCA 59.653 61.111 0.00 0.00 42.56 3.91
444 461 1.078848 CTGGGAGAAGTGGCCGAAG 60.079 63.158 0.00 0.00 0.00 3.79
445 462 3.068881 CTGGGAGAAGTGGCCGAA 58.931 61.111 0.00 0.00 0.00 4.30
446 463 3.706373 GCTGGGAGAAGTGGCCGA 61.706 66.667 0.00 0.00 0.00 5.54
448 465 3.650950 TGGCTGGGAGAAGTGGCC 61.651 66.667 0.00 0.00 42.73 5.36
450 467 0.322008 GAAGTGGCTGGGAGAAGTGG 60.322 60.000 0.00 0.00 0.00 4.00
451 468 0.397941 TGAAGTGGCTGGGAGAAGTG 59.602 55.000 0.00 0.00 0.00 3.16
452 469 0.398318 GTGAAGTGGCTGGGAGAAGT 59.602 55.000 0.00 0.00 0.00 3.01
455 472 0.764369 ACAGTGAAGTGGCTGGGAGA 60.764 55.000 0.00 0.00 37.07 3.71
465 482 4.505742 GGGGAAGAAGATGAACAGTGAAGT 60.506 45.833 0.00 0.00 0.00 3.01
471 488 3.698040 CCATTGGGGAAGAAGATGAACAG 59.302 47.826 0.00 0.00 40.01 3.16
492 509 3.311110 TCGGAGGTGGTCTGCACC 61.311 66.667 0.00 0.00 44.10 5.01
493 510 2.048127 GTCGGAGGTGGTCTGCAC 60.048 66.667 0.00 0.00 32.95 4.57
502 519 2.872250 TTAGGGGTGGGTCGGAGGT 61.872 63.158 0.00 0.00 0.00 3.85
506 523 3.777910 CGGTTAGGGGTGGGTCGG 61.778 72.222 0.00 0.00 0.00 4.79
507 524 4.462280 GCGGTTAGGGGTGGGTCG 62.462 72.222 0.00 0.00 0.00 4.79
514 531 2.908796 GGAGAAGGCGGTTAGGGG 59.091 66.667 0.00 0.00 0.00 4.79
527 544 1.109920 GTGCAGAGGATAGCCGGAGA 61.110 60.000 5.05 0.00 39.96 3.71
535 833 1.692749 GGTGGGGGTGCAGAGGATA 60.693 63.158 0.00 0.00 0.00 2.59
552 850 5.482175 CAGTCCCACTATCTATCTTTAGGGG 59.518 48.000 0.00 0.00 38.52 4.79
554 852 5.046950 GGCAGTCCCACTATCTATCTTTAGG 60.047 48.000 0.00 0.00 0.00 2.69
573 1995 3.289797 TCATCGGAGAAGAGGCAGT 57.710 52.632 0.00 0.00 43.58 4.40
588 2010 5.344743 TTTCTAGTTCATTCCGAGCTCAT 57.655 39.130 15.40 0.00 36.46 2.90
589 2011 4.801330 TTTCTAGTTCATTCCGAGCTCA 57.199 40.909 15.40 0.00 36.46 4.26
590 2012 4.568760 CCTTTTCTAGTTCATTCCGAGCTC 59.431 45.833 2.73 2.73 36.46 4.09
591 2013 4.020128 ACCTTTTCTAGTTCATTCCGAGCT 60.020 41.667 0.00 0.00 38.87 4.09
592 2014 4.093556 CACCTTTTCTAGTTCATTCCGAGC 59.906 45.833 0.00 0.00 0.00 5.03
593 2015 5.348997 GTCACCTTTTCTAGTTCATTCCGAG 59.651 44.000 0.00 0.00 0.00 4.63
594 2016 5.235516 GTCACCTTTTCTAGTTCATTCCGA 58.764 41.667 0.00 0.00 0.00 4.55
598 2020 5.465724 GTGTCGTCACCTTTTCTAGTTCATT 59.534 40.000 0.96 0.00 38.51 2.57
612 2034 3.872560 AATTTTCTTCGTGTCGTCACC 57.127 42.857 7.21 0.00 41.09 4.02
618 2040 4.441087 GTGCCTGAAAATTTTCTTCGTGTC 59.559 41.667 26.73 12.25 38.02 3.67
620 2042 3.735746 GGTGCCTGAAAATTTTCTTCGTG 59.264 43.478 26.73 13.94 38.02 4.35
621 2043 3.243737 GGGTGCCTGAAAATTTTCTTCGT 60.244 43.478 26.73 0.00 38.02 3.85
638 2061 3.248602 CAGTTTTGCTATATCTCGGGTGC 59.751 47.826 0.00 0.00 0.00 5.01
832 2257 1.133823 TGTGCCTGCCTCTTTGAAAGA 60.134 47.619 7.49 7.49 35.87 2.52
852 2277 2.093764 GCTGCTCATGTCTTAGTCTGGT 60.094 50.000 0.00 0.00 0.00 4.00
853 2278 2.093816 TGCTGCTCATGTCTTAGTCTGG 60.094 50.000 0.00 0.00 0.00 3.86
854 2279 3.242549 TGCTGCTCATGTCTTAGTCTG 57.757 47.619 0.00 0.00 0.00 3.51
856 2281 5.842619 CATATGCTGCTCATGTCTTAGTC 57.157 43.478 0.00 0.00 36.63 2.59
872 2297 1.401552 TCGTTGCAGGAAAGCATATGC 59.598 47.619 20.36 20.36 45.19 3.14
873 2298 2.540361 GCTCGTTGCAGGAAAGCATATG 60.540 50.000 0.00 0.00 45.19 1.78
874 2299 1.672881 GCTCGTTGCAGGAAAGCATAT 59.327 47.619 7.36 0.00 45.19 1.78
875 2300 1.086696 GCTCGTTGCAGGAAAGCATA 58.913 50.000 7.36 0.00 45.19 3.14
876 2301 1.878775 GCTCGTTGCAGGAAAGCAT 59.121 52.632 7.36 0.00 45.19 3.79
877 2302 3.343972 GCTCGTTGCAGGAAAGCA 58.656 55.556 7.36 0.00 43.99 3.91
901 2328 2.048023 CGGCATGTCACATGGCCTT 61.048 57.895 32.37 0.00 44.23 4.35
919 2346 3.271729 GGAAACCTAACAGCCTAGCTTC 58.728 50.000 0.00 0.00 36.40 3.86
1357 2812 4.708386 TAACCACAAGCGGCGGGG 62.708 66.667 9.78 0.00 0.00 5.73
1380 2846 1.452108 GCTTGGCCGGAGCATACTT 60.452 57.895 22.11 0.00 42.56 2.24
1381 2847 2.190578 GCTTGGCCGGAGCATACT 59.809 61.111 22.11 0.00 42.56 2.12
1382 2848 3.272334 CGCTTGGCCGGAGCATAC 61.272 66.667 25.15 2.42 42.56 2.39
1383 2849 2.923426 CTTCGCTTGGCCGGAGCATA 62.923 60.000 25.15 13.26 42.56 3.14
1384 2850 4.408821 TTCGCTTGGCCGGAGCAT 62.409 61.111 25.15 0.00 42.56 3.79
1403 2869 0.974010 CCAGGGGCAGGTACGTAGAA 60.974 60.000 0.00 0.00 0.00 2.10
1618 3090 1.960689 ACAATGGCAAAAGTAAGCGGT 59.039 42.857 0.00 0.00 0.00 5.68
1620 3092 5.398169 TGATTACAATGGCAAAAGTAAGCG 58.602 37.500 15.48 0.00 36.08 4.68
1625 3097 5.163416 GCCCTATGATTACAATGGCAAAAGT 60.163 40.000 0.00 0.00 37.68 2.66
1632 3107 5.163426 TGCAAAAGCCCTATGATTACAATGG 60.163 40.000 0.00 0.00 0.00 3.16
1721 3202 0.806241 TCGGACATGATCGACGTTGA 59.194 50.000 8.21 8.21 0.00 3.18
1729 3210 4.500603 AAGGTATACGTCGGACATGATC 57.499 45.455 9.10 0.00 0.00 2.92
1738 3219 8.235226 AGAATATGATGTGTAAGGTATACGTCG 58.765 37.037 0.00 0.00 38.27 5.12
1797 3278 4.014593 ACTTTCCTATCTTTCCCCTCCCTA 60.015 45.833 0.00 0.00 0.00 3.53
1801 3282 8.824756 ATTAAAACTTTCCTATCTTTCCCCTC 57.175 34.615 0.00 0.00 0.00 4.30
1868 3350 7.764331 TCAAACTTTCCTTGTTTTACCTACAC 58.236 34.615 0.00 0.00 35.71 2.90
1869 3351 7.941431 TCAAACTTTCCTTGTTTTACCTACA 57.059 32.000 0.00 0.00 35.71 2.74
1951 3433 8.392612 CAAAATTGATACTTTCCAAATCCATGC 58.607 33.333 0.00 0.00 0.00 4.06
2110 3615 3.514309 GAGGAGTTGGTAGCCTTGTCTTA 59.486 47.826 0.00 0.00 30.70 2.10
2116 3621 4.562963 CGTTAAAGAGGAGTTGGTAGCCTT 60.563 45.833 0.00 0.00 30.70 4.35
2118 3623 3.259902 CGTTAAAGAGGAGTTGGTAGCC 58.740 50.000 0.00 0.00 0.00 3.93
2163 3685 6.658188 ATAAAATCCACCCTTTGTCGAAAA 57.342 33.333 0.00 0.00 0.00 2.29
2164 3686 6.265649 TCAATAAAATCCACCCTTTGTCGAAA 59.734 34.615 0.00 0.00 0.00 3.46
2165 3687 5.770663 TCAATAAAATCCACCCTTTGTCGAA 59.229 36.000 0.00 0.00 0.00 3.71
2166 3688 5.317808 TCAATAAAATCCACCCTTTGTCGA 58.682 37.500 0.00 0.00 0.00 4.20
2167 3689 5.637006 TCAATAAAATCCACCCTTTGTCG 57.363 39.130 0.00 0.00 0.00 4.35
2168 3690 7.610865 TGATTCAATAAAATCCACCCTTTGTC 58.389 34.615 0.00 0.00 35.23 3.18
2169 3691 7.552050 TGATTCAATAAAATCCACCCTTTGT 57.448 32.000 0.00 0.00 35.23 2.83
2170 3692 9.754382 CTATGATTCAATAAAATCCACCCTTTG 57.246 33.333 0.00 0.00 35.23 2.77
2171 3693 9.492730 ACTATGATTCAATAAAATCCACCCTTT 57.507 29.630 0.00 0.00 35.23 3.11
2172 3694 8.917088 CACTATGATTCAATAAAATCCACCCTT 58.083 33.333 0.00 0.00 35.23 3.95
2173 3695 8.281531 TCACTATGATTCAATAAAATCCACCCT 58.718 33.333 0.00 0.00 35.23 4.34
2174 3696 8.463930 TCACTATGATTCAATAAAATCCACCC 57.536 34.615 0.00 0.00 35.23 4.61
2175 3697 9.956720 CTTCACTATGATTCAATAAAATCCACC 57.043 33.333 0.00 0.00 35.23 4.61
2176 3698 9.455847 GCTTCACTATGATTCAATAAAATCCAC 57.544 33.333 0.00 0.00 35.23 4.02
2177 3699 9.187996 TGCTTCACTATGATTCAATAAAATCCA 57.812 29.630 0.00 0.00 35.23 3.41
2183 3705 8.347771 GCTTGATGCTTCACTATGATTCAATAA 58.652 33.333 1.02 0.00 38.95 1.40
2184 3706 7.307573 CGCTTGATGCTTCACTATGATTCAATA 60.308 37.037 1.02 0.00 40.11 1.90
2185 3707 6.512903 CGCTTGATGCTTCACTATGATTCAAT 60.513 38.462 1.02 0.00 40.11 2.57
2186 3708 5.220719 CGCTTGATGCTTCACTATGATTCAA 60.221 40.000 1.02 0.00 40.11 2.69
2187 3709 4.271776 CGCTTGATGCTTCACTATGATTCA 59.728 41.667 1.02 0.00 40.11 2.57
2188 3710 4.319333 CCGCTTGATGCTTCACTATGATTC 60.319 45.833 1.02 0.00 40.11 2.52
2189 3711 3.562973 CCGCTTGATGCTTCACTATGATT 59.437 43.478 1.02 0.00 40.11 2.57
2190 3712 3.136763 CCGCTTGATGCTTCACTATGAT 58.863 45.455 1.02 0.00 40.11 2.45
2191 3713 2.168313 TCCGCTTGATGCTTCACTATGA 59.832 45.455 1.02 0.00 40.11 2.15
2192 3714 2.554142 TCCGCTTGATGCTTCACTATG 58.446 47.619 1.02 0.00 40.11 2.23
2193 3715 2.988010 TCCGCTTGATGCTTCACTAT 57.012 45.000 1.02 0.00 40.11 2.12
2194 3716 2.988010 ATCCGCTTGATGCTTCACTA 57.012 45.000 1.02 0.00 40.11 2.74
2195 3717 2.093500 TGTATCCGCTTGATGCTTCACT 60.093 45.455 1.02 0.00 37.04 3.41
2196 3718 2.279741 TGTATCCGCTTGATGCTTCAC 58.720 47.619 1.02 0.00 37.04 3.18
2197 3719 2.689553 TGTATCCGCTTGATGCTTCA 57.310 45.000 0.00 0.00 37.04 3.02
2198 3720 3.126858 TGTTTGTATCCGCTTGATGCTTC 59.873 43.478 0.00 0.00 37.04 3.86
2199 3721 3.081061 TGTTTGTATCCGCTTGATGCTT 58.919 40.909 3.59 0.00 37.04 3.91
2200 3722 2.420022 GTGTTTGTATCCGCTTGATGCT 59.580 45.455 3.59 0.00 37.04 3.79
2201 3723 2.161410 TGTGTTTGTATCCGCTTGATGC 59.839 45.455 0.00 0.00 36.68 3.91
2202 3724 4.418013 TTGTGTTTGTATCCGCTTGATG 57.582 40.909 0.00 0.00 34.76 3.07
2203 3725 4.699735 TCATTGTGTTTGTATCCGCTTGAT 59.300 37.500 0.00 0.00 37.49 2.57
2204 3726 4.068599 TCATTGTGTTTGTATCCGCTTGA 58.931 39.130 0.00 0.00 0.00 3.02
2205 3727 4.418013 TCATTGTGTTTGTATCCGCTTG 57.582 40.909 0.00 0.00 0.00 4.01
2206 3728 5.643379 ATTCATTGTGTTTGTATCCGCTT 57.357 34.783 0.00 0.00 0.00 4.68
2207 3729 5.645929 TGTATTCATTGTGTTTGTATCCGCT 59.354 36.000 0.00 0.00 0.00 5.52
2208 3730 5.737290 GTGTATTCATTGTGTTTGTATCCGC 59.263 40.000 0.00 0.00 0.00 5.54
2209 3731 6.740905 GTGTGTATTCATTGTGTTTGTATCCG 59.259 38.462 0.00 0.00 0.00 4.18
2210 3732 7.027161 GGTGTGTATTCATTGTGTTTGTATCC 58.973 38.462 0.00 0.00 0.00 2.59
2211 3733 7.027161 GGGTGTGTATTCATTGTGTTTGTATC 58.973 38.462 0.00 0.00 0.00 2.24
2212 3734 6.348950 CGGGTGTGTATTCATTGTGTTTGTAT 60.349 38.462 0.00 0.00 0.00 2.29
2213 3735 5.049336 CGGGTGTGTATTCATTGTGTTTGTA 60.049 40.000 0.00 0.00 0.00 2.41
2214 3736 4.261405 CGGGTGTGTATTCATTGTGTTTGT 60.261 41.667 0.00 0.00 0.00 2.83
2215 3737 4.225984 CGGGTGTGTATTCATTGTGTTTG 58.774 43.478 0.00 0.00 0.00 2.93
2216 3738 3.254657 CCGGGTGTGTATTCATTGTGTTT 59.745 43.478 0.00 0.00 0.00 2.83
2217 3739 2.817258 CCGGGTGTGTATTCATTGTGTT 59.183 45.455 0.00 0.00 0.00 3.32
2218 3740 2.432444 CCGGGTGTGTATTCATTGTGT 58.568 47.619 0.00 0.00 0.00 3.72
2219 3741 1.132262 GCCGGGTGTGTATTCATTGTG 59.868 52.381 2.18 0.00 0.00 3.33
2220 3742 1.459450 GCCGGGTGTGTATTCATTGT 58.541 50.000 2.18 0.00 0.00 2.71
2221 3743 0.738389 GGCCGGGTGTGTATTCATTG 59.262 55.000 2.18 0.00 0.00 2.82
2222 3744 0.623723 AGGCCGGGTGTGTATTCATT 59.376 50.000 2.18 0.00 0.00 2.57
2223 3745 0.180406 GAGGCCGGGTGTGTATTCAT 59.820 55.000 2.18 0.00 0.00 2.57
2224 3746 0.907704 AGAGGCCGGGTGTGTATTCA 60.908 55.000 2.18 0.00 0.00 2.57
2225 3747 0.462047 CAGAGGCCGGGTGTGTATTC 60.462 60.000 2.18 0.00 0.00 1.75
2226 3748 1.602237 CAGAGGCCGGGTGTGTATT 59.398 57.895 2.18 0.00 0.00 1.89
2227 3749 3.031417 GCAGAGGCCGGGTGTGTAT 62.031 63.158 2.18 0.00 0.00 2.29
2228 3750 3.702048 GCAGAGGCCGGGTGTGTA 61.702 66.667 2.18 0.00 0.00 2.90
2230 3752 2.535485 TTATGCAGAGGCCGGGTGTG 62.535 60.000 2.18 0.00 40.13 3.82
2231 3753 2.297895 TTATGCAGAGGCCGGGTGT 61.298 57.895 2.18 0.00 40.13 4.16
2232 3754 1.819632 GTTATGCAGAGGCCGGGTG 60.820 63.158 2.18 0.00 40.13 4.61
2233 3755 0.689745 TAGTTATGCAGAGGCCGGGT 60.690 55.000 2.18 0.00 40.13 5.28
2234 3756 0.468226 TTAGTTATGCAGAGGCCGGG 59.532 55.000 2.18 0.00 40.13 5.73
2235 3757 1.412710 TCTTAGTTATGCAGAGGCCGG 59.587 52.381 0.00 0.00 40.13 6.13
2236 3758 2.890808 TCTTAGTTATGCAGAGGCCG 57.109 50.000 0.00 0.00 40.13 6.13
2245 3767 3.940852 TGGCTGTGTGCATCTTAGTTATG 59.059 43.478 0.00 0.00 45.15 1.90
2246 3768 4.220693 TGGCTGTGTGCATCTTAGTTAT 57.779 40.909 0.00 0.00 45.15 1.89
2247 3769 3.694043 TGGCTGTGTGCATCTTAGTTA 57.306 42.857 0.00 0.00 45.15 2.24
2248 3770 2.554032 GTTGGCTGTGTGCATCTTAGTT 59.446 45.455 0.00 0.00 45.15 2.24
2249 3771 2.154462 GTTGGCTGTGTGCATCTTAGT 58.846 47.619 0.00 0.00 45.15 2.24
2250 3772 2.095567 GTGTTGGCTGTGTGCATCTTAG 60.096 50.000 0.00 0.00 45.15 2.18
2251 3773 1.879380 GTGTTGGCTGTGTGCATCTTA 59.121 47.619 0.00 0.00 45.15 2.10
2252 3774 0.670162 GTGTTGGCTGTGTGCATCTT 59.330 50.000 0.00 0.00 45.15 2.40
2253 3775 1.174712 GGTGTTGGCTGTGTGCATCT 61.175 55.000 0.00 0.00 45.15 2.90
2254 3776 1.286880 GGTGTTGGCTGTGTGCATC 59.713 57.895 0.00 0.00 45.15 3.91
2255 3777 1.042003 TTGGTGTTGGCTGTGTGCAT 61.042 50.000 0.00 0.00 45.15 3.96
2256 3778 1.680314 TTGGTGTTGGCTGTGTGCA 60.680 52.632 0.00 0.00 45.15 4.57
2257 3779 1.226945 GTTGGTGTTGGCTGTGTGC 60.227 57.895 0.00 0.00 41.94 4.57
2258 3780 0.179140 GTGTTGGTGTTGGCTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
2259 3781 0.610509 TGTGTTGGTGTTGGCTGTGT 60.611 50.000 0.00 0.00 0.00 3.72
2260 3782 0.746063 ATGTGTTGGTGTTGGCTGTG 59.254 50.000 0.00 0.00 0.00 3.66
2261 3783 2.356665 TATGTGTTGGTGTTGGCTGT 57.643 45.000 0.00 0.00 0.00 4.40
2262 3784 3.724508 TTTATGTGTTGGTGTTGGCTG 57.275 42.857 0.00 0.00 0.00 4.85
2263 3785 4.262420 GGATTTTATGTGTTGGTGTTGGCT 60.262 41.667 0.00 0.00 0.00 4.75
2264 3786 3.993736 GGATTTTATGTGTTGGTGTTGGC 59.006 43.478 0.00 0.00 0.00 4.52
2265 3787 4.039730 TGGGATTTTATGTGTTGGTGTTGG 59.960 41.667 0.00 0.00 0.00 3.77
2266 3788 5.207110 TGGGATTTTATGTGTTGGTGTTG 57.793 39.130 0.00 0.00 0.00 3.33
2267 3789 5.541868 TGATGGGATTTTATGTGTTGGTGTT 59.458 36.000 0.00 0.00 0.00 3.32
2268 3790 5.083122 TGATGGGATTTTATGTGTTGGTGT 58.917 37.500 0.00 0.00 0.00 4.16
2269 3791 5.653507 CTGATGGGATTTTATGTGTTGGTG 58.346 41.667 0.00 0.00 0.00 4.17
2270 3792 4.160252 GCTGATGGGATTTTATGTGTTGGT 59.840 41.667 0.00 0.00 0.00 3.67
2271 3793 4.160065 TGCTGATGGGATTTTATGTGTTGG 59.840 41.667 0.00 0.00 0.00 3.77
2272 3794 5.327616 TGCTGATGGGATTTTATGTGTTG 57.672 39.130 0.00 0.00 0.00 3.33
2273 3795 5.999205 TTGCTGATGGGATTTTATGTGTT 57.001 34.783 0.00 0.00 0.00 3.32
2274 3796 5.999205 TTTGCTGATGGGATTTTATGTGT 57.001 34.783 0.00 0.00 0.00 3.72
2275 3797 6.643770 GCTATTTGCTGATGGGATTTTATGTG 59.356 38.462 0.00 0.00 38.95 3.21
2276 3798 6.324512 TGCTATTTGCTGATGGGATTTTATGT 59.675 34.615 0.00 0.00 43.37 2.29
2277 3799 6.751157 TGCTATTTGCTGATGGGATTTTATG 58.249 36.000 0.00 0.00 43.37 1.90
2278 3800 6.982160 TGCTATTTGCTGATGGGATTTTAT 57.018 33.333 0.00 0.00 43.37 1.40
2279 3801 6.788598 TTGCTATTTGCTGATGGGATTTTA 57.211 33.333 0.00 0.00 43.37 1.52
2280 3802 5.680594 TTGCTATTTGCTGATGGGATTTT 57.319 34.783 0.00 0.00 43.37 1.82
2281 3803 5.188359 ACTTTGCTATTTGCTGATGGGATTT 59.812 36.000 0.00 0.00 43.37 2.17
2282 3804 4.713321 ACTTTGCTATTTGCTGATGGGATT 59.287 37.500 0.00 0.00 43.37 3.01
2283 3805 4.284178 ACTTTGCTATTTGCTGATGGGAT 58.716 39.130 0.00 0.00 43.37 3.85
2284 3806 3.696051 GACTTTGCTATTTGCTGATGGGA 59.304 43.478 0.00 0.00 43.37 4.37
2285 3807 3.444742 TGACTTTGCTATTTGCTGATGGG 59.555 43.478 0.00 0.00 43.37 4.00
2286 3808 4.707030 TGACTTTGCTATTTGCTGATGG 57.293 40.909 0.00 0.00 43.37 3.51
2287 3809 8.235226 CCTATATGACTTTGCTATTTGCTGATG 58.765 37.037 0.00 0.00 43.37 3.07
2288 3810 8.159447 TCCTATATGACTTTGCTATTTGCTGAT 58.841 33.333 0.00 0.00 43.37 2.90
2289 3811 7.442364 GTCCTATATGACTTTGCTATTTGCTGA 59.558 37.037 1.26 0.00 36.08 4.26
2290 3812 7.308229 GGTCCTATATGACTTTGCTATTTGCTG 60.308 40.741 7.91 0.00 37.72 4.41
2291 3813 6.712547 GGTCCTATATGACTTTGCTATTTGCT 59.287 38.462 7.91 0.00 37.72 3.91
2292 3814 6.486657 TGGTCCTATATGACTTTGCTATTTGC 59.513 38.462 7.91 0.00 37.53 3.68
2293 3815 8.450578 TTGGTCCTATATGACTTTGCTATTTG 57.549 34.615 7.91 0.00 35.54 2.32
2294 3816 9.125026 CTTTGGTCCTATATGACTTTGCTATTT 57.875 33.333 7.91 0.00 35.54 1.40
2295 3817 7.229506 GCTTTGGTCCTATATGACTTTGCTATT 59.770 37.037 7.91 0.00 35.54 1.73
2296 3818 6.712547 GCTTTGGTCCTATATGACTTTGCTAT 59.287 38.462 7.91 0.00 35.54 2.97
2297 3819 6.055588 GCTTTGGTCCTATATGACTTTGCTA 58.944 40.000 7.91 0.00 35.54 3.49
2298 3820 4.884164 GCTTTGGTCCTATATGACTTTGCT 59.116 41.667 7.91 0.00 35.54 3.91
2299 3821 4.884164 AGCTTTGGTCCTATATGACTTTGC 59.116 41.667 7.91 7.58 35.54 3.68
2300 3822 7.308229 GCATAGCTTTGGTCCTATATGACTTTG 60.308 40.741 6.29 0.00 35.54 2.77
2301 3823 6.712547 GCATAGCTTTGGTCCTATATGACTTT 59.287 38.462 6.29 0.00 35.54 2.66
2302 3824 6.183361 TGCATAGCTTTGGTCCTATATGACTT 60.183 38.462 6.29 0.00 35.54 3.01
2303 3825 5.307976 TGCATAGCTTTGGTCCTATATGACT 59.692 40.000 6.29 0.00 35.54 3.41
2304 3826 5.551233 TGCATAGCTTTGGTCCTATATGAC 58.449 41.667 6.29 0.00 34.42 3.06
2305 3827 5.823861 TGCATAGCTTTGGTCCTATATGA 57.176 39.130 6.29 0.00 0.00 2.15
2306 3828 7.201679 GCTTATGCATAGCTTTGGTCCTATATG 60.202 40.741 16.28 0.00 39.41 1.78
2307 3829 6.825721 GCTTATGCATAGCTTTGGTCCTATAT 59.174 38.462 16.28 0.00 39.41 0.86
2308 3830 6.173339 GCTTATGCATAGCTTTGGTCCTATA 58.827 40.000 16.28 0.00 39.41 1.31
2309 3831 5.006386 GCTTATGCATAGCTTTGGTCCTAT 58.994 41.667 16.28 0.00 39.41 2.57
2310 3832 4.389374 GCTTATGCATAGCTTTGGTCCTA 58.611 43.478 16.28 0.00 39.41 2.94
2311 3833 3.217626 GCTTATGCATAGCTTTGGTCCT 58.782 45.455 16.28 0.00 39.41 3.85
2312 3834 2.031682 CGCTTATGCATAGCTTTGGTCC 60.032 50.000 19.26 0.00 39.64 4.46
2313 3835 2.031682 CCGCTTATGCATAGCTTTGGTC 60.032 50.000 19.26 0.00 39.64 4.02
2314 3836 1.949525 CCGCTTATGCATAGCTTTGGT 59.050 47.619 19.26 0.00 39.64 3.67
2315 3837 1.267806 CCCGCTTATGCATAGCTTTGG 59.732 52.381 19.26 14.77 39.64 3.28
2316 3838 1.267806 CCCCGCTTATGCATAGCTTTG 59.732 52.381 19.26 0.00 39.64 2.77
2317 3839 1.142870 TCCCCGCTTATGCATAGCTTT 59.857 47.619 19.26 0.00 39.64 3.51
2318 3840 0.764890 TCCCCGCTTATGCATAGCTT 59.235 50.000 19.26 0.00 39.64 3.74
2319 3841 0.764890 TTCCCCGCTTATGCATAGCT 59.235 50.000 19.26 0.00 39.64 3.32
2320 3842 1.604604 TTTCCCCGCTTATGCATAGC 58.395 50.000 6.50 11.44 39.64 2.97
2321 3843 3.380004 TGTTTTTCCCCGCTTATGCATAG 59.620 43.478 6.50 2.95 39.64 2.23
2322 3844 3.357203 TGTTTTTCCCCGCTTATGCATA 58.643 40.909 1.16 1.16 39.64 3.14
2323 3845 2.175202 TGTTTTTCCCCGCTTATGCAT 58.825 42.857 3.79 3.79 39.64 3.96
2324 3846 1.621992 TGTTTTTCCCCGCTTATGCA 58.378 45.000 1.16 0.00 39.64 3.96
2325 3847 2.165437 TGATGTTTTTCCCCGCTTATGC 59.835 45.455 0.00 0.00 0.00 3.14
2326 3848 4.448537 TTGATGTTTTTCCCCGCTTATG 57.551 40.909 0.00 0.00 0.00 1.90
2327 3849 4.620567 GCTTTGATGTTTTTCCCCGCTTAT 60.621 41.667 0.00 0.00 0.00 1.73
2328 3850 3.305744 GCTTTGATGTTTTTCCCCGCTTA 60.306 43.478 0.00 0.00 0.00 3.09
2329 3851 2.547855 GCTTTGATGTTTTTCCCCGCTT 60.548 45.455 0.00 0.00 0.00 4.68
2330 3852 1.000843 GCTTTGATGTTTTTCCCCGCT 59.999 47.619 0.00 0.00 0.00 5.52
2331 3853 1.428448 GCTTTGATGTTTTTCCCCGC 58.572 50.000 0.00 0.00 0.00 6.13
2332 3854 1.268352 TCGCTTTGATGTTTTTCCCCG 59.732 47.619 0.00 0.00 0.00 5.73
2333 3855 3.057019 GTTCGCTTTGATGTTTTTCCCC 58.943 45.455 0.00 0.00 0.00 4.81
2334 3856 3.712187 TGTTCGCTTTGATGTTTTTCCC 58.288 40.909 0.00 0.00 0.00 3.97
2335 3857 5.710613 TTTGTTCGCTTTGATGTTTTTCC 57.289 34.783 0.00 0.00 0.00 3.13
2336 3858 7.527183 GCTAATTTGTTCGCTTTGATGTTTTTC 59.473 33.333 0.00 0.00 0.00 2.29
2337 3859 7.010923 TGCTAATTTGTTCGCTTTGATGTTTTT 59.989 29.630 0.00 0.00 0.00 1.94
2338 3860 6.478344 TGCTAATTTGTTCGCTTTGATGTTTT 59.522 30.769 0.00 0.00 0.00 2.43
2339 3861 5.982516 TGCTAATTTGTTCGCTTTGATGTTT 59.017 32.000 0.00 0.00 0.00 2.83
2340 3862 5.527951 TGCTAATTTGTTCGCTTTGATGTT 58.472 33.333 0.00 0.00 0.00 2.71
2341 3863 5.119931 TGCTAATTTGTTCGCTTTGATGT 57.880 34.783 0.00 0.00 0.00 3.06
2342 3864 6.505265 CGATTGCTAATTTGTTCGCTTTGATG 60.505 38.462 0.00 0.00 0.00 3.07
2343 3865 5.512788 CGATTGCTAATTTGTTCGCTTTGAT 59.487 36.000 0.00 0.00 0.00 2.57
2344 3866 4.851014 CGATTGCTAATTTGTTCGCTTTGA 59.149 37.500 0.00 0.00 0.00 2.69
2345 3867 4.851014 TCGATTGCTAATTTGTTCGCTTTG 59.149 37.500 0.00 0.00 0.00 2.77
2346 3868 4.851558 GTCGATTGCTAATTTGTTCGCTTT 59.148 37.500 0.00 0.00 0.00 3.51
2347 3869 4.083537 TGTCGATTGCTAATTTGTTCGCTT 60.084 37.500 0.00 0.00 0.00 4.68
2348 3870 3.435327 TGTCGATTGCTAATTTGTTCGCT 59.565 39.130 0.00 0.00 0.00 4.93
2349 3871 3.742786 TGTCGATTGCTAATTTGTTCGC 58.257 40.909 0.00 0.00 0.00 4.70
2350 3872 5.851177 AGTTTGTCGATTGCTAATTTGTTCG 59.149 36.000 0.00 0.00 0.00 3.95
2351 3873 7.801315 TGTAGTTTGTCGATTGCTAATTTGTTC 59.199 33.333 0.00 0.00 0.00 3.18
2352 3874 7.644490 TGTAGTTTGTCGATTGCTAATTTGTT 58.356 30.769 0.00 0.00 0.00 2.83
2353 3875 7.197071 TGTAGTTTGTCGATTGCTAATTTGT 57.803 32.000 0.00 0.00 0.00 2.83
2354 3876 8.673626 ATTGTAGTTTGTCGATTGCTAATTTG 57.326 30.769 0.00 0.00 0.00 2.32
2357 3879 9.935682 CATTATTGTAGTTTGTCGATTGCTAAT 57.064 29.630 0.00 0.00 0.00 1.73
2358 3880 9.157104 TCATTATTGTAGTTTGTCGATTGCTAA 57.843 29.630 0.00 0.00 0.00 3.09
2359 3881 8.600625 GTCATTATTGTAGTTTGTCGATTGCTA 58.399 33.333 0.00 0.00 0.00 3.49
2360 3882 7.414098 GGTCATTATTGTAGTTTGTCGATTGCT 60.414 37.037 0.00 0.00 0.00 3.91
2361 3883 6.687105 GGTCATTATTGTAGTTTGTCGATTGC 59.313 38.462 0.00 0.00 0.00 3.56
2362 3884 7.747888 TGGTCATTATTGTAGTTTGTCGATTG 58.252 34.615 0.00 0.00 0.00 2.67
2363 3885 7.915293 TGGTCATTATTGTAGTTTGTCGATT 57.085 32.000 0.00 0.00 0.00 3.34
2364 3886 8.506168 AATGGTCATTATTGTAGTTTGTCGAT 57.494 30.769 0.00 0.00 0.00 3.59
2365 3887 7.915293 AATGGTCATTATTGTAGTTTGTCGA 57.085 32.000 0.00 0.00 0.00 4.20
2385 3907 1.058284 CCATGGCCCCCATTTAATGG 58.942 55.000 16.56 16.56 42.23 3.16
2386 3908 1.805180 ACCATGGCCCCCATTTAATG 58.195 50.000 13.04 0.00 42.23 1.90
2387 3909 2.522273 ACTACCATGGCCCCCATTTAAT 59.478 45.455 13.04 0.00 42.23 1.40
2388 3910 1.933765 ACTACCATGGCCCCCATTTAA 59.066 47.619 13.04 0.00 42.23 1.52
2389 3911 1.216678 CACTACCATGGCCCCCATTTA 59.783 52.381 13.04 0.00 42.23 1.40
2392 3914 0.702356 ATCACTACCATGGCCCCCAT 60.702 55.000 13.04 0.00 46.37 4.00
2393 3915 1.308657 ATCACTACCATGGCCCCCA 60.309 57.895 13.04 0.00 38.19 4.96
2396 3918 0.179018 GACCATCACTACCATGGCCC 60.179 60.000 13.04 0.00 44.32 5.80
2398 3920 0.532862 CCGACCATCACTACCATGGC 60.533 60.000 13.04 0.00 44.32 4.40
2400 3922 1.757118 AGACCGACCATCACTACCATG 59.243 52.381 0.00 0.00 0.00 3.66
2404 3926 1.183549 ACCAGACCGACCATCACTAC 58.816 55.000 0.00 0.00 0.00 2.73
2405 3927 1.548719 CAACCAGACCGACCATCACTA 59.451 52.381 0.00 0.00 0.00 2.74
2407 3929 0.034896 ACAACCAGACCGACCATCAC 59.965 55.000 0.00 0.00 0.00 3.06
2414 3936 1.069513 ACGAAATGACAACCAGACCGA 59.930 47.619 0.00 0.00 0.00 4.69
2419 3941 4.041723 GGAACAAACGAAATGACAACCAG 58.958 43.478 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.