Multiple sequence alignment - TraesCS2D01G504000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G504000 | chr2D | 100.000 | 7987 | 0 | 0 | 1 | 7987 | 598721234 | 598713248 | 0.000000e+00 | 14750.0 |
1 | TraesCS2D01G504000 | chr2D | 96.037 | 328 | 9 | 1 | 2379 | 2706 | 256674430 | 256674107 | 1.530000e-146 | 531.0 |
2 | TraesCS2D01G504000 | chr2B | 96.211 | 2745 | 83 | 9 | 2839 | 5570 | 726552132 | 726549396 | 0.000000e+00 | 4473.0 |
3 | TraesCS2D01G504000 | chr2B | 93.078 | 2528 | 96 | 31 | 360 | 2842 | 726554701 | 726552208 | 0.000000e+00 | 3626.0 |
4 | TraesCS2D01G504000 | chr2B | 92.870 | 1697 | 58 | 31 | 6302 | 7987 | 726547996 | 726546352 | 0.000000e+00 | 2405.0 |
5 | TraesCS2D01G504000 | chr2B | 94.939 | 494 | 24 | 1 | 5808 | 6300 | 726548534 | 726548041 | 0.000000e+00 | 773.0 |
6 | TraesCS2D01G504000 | chr2B | 96.330 | 109 | 4 | 0 | 5686 | 5794 | 726549019 | 726548911 | 6.370000e-41 | 180.0 |
7 | TraesCS2D01G504000 | chr2A | 93.911 | 2562 | 120 | 24 | 3090 | 5631 | 732586737 | 732584192 | 0.000000e+00 | 3834.0 |
8 | TraesCS2D01G504000 | chr2A | 91.942 | 2209 | 113 | 34 | 5810 | 7987 | 732583047 | 732580873 | 0.000000e+00 | 3033.0 |
9 | TraesCS2D01G504000 | chr2A | 91.289 | 1458 | 61 | 18 | 362 | 1773 | 732589049 | 732587612 | 0.000000e+00 | 1929.0 |
10 | TraesCS2D01G504000 | chr2A | 93.642 | 346 | 22 | 0 | 2362 | 2707 | 633948842 | 633949187 | 1.190000e-142 | 518.0 |
11 | TraesCS2D01G504000 | chr2A | 85.574 | 305 | 26 | 10 | 2065 | 2368 | 732587394 | 732587107 | 3.620000e-78 | 303.0 |
12 | TraesCS2D01G504000 | chr2A | 94.624 | 93 | 5 | 0 | 2932 | 3024 | 732586822 | 732586730 | 2.320000e-30 | 145.0 |
13 | TraesCS2D01G504000 | chr2A | 100.000 | 37 | 0 | 0 | 5686 | 5722 | 732583527 | 732583491 | 1.440000e-07 | 69.4 |
14 | TraesCS2D01G504000 | chr7B | 95.640 | 344 | 12 | 3 | 2367 | 2707 | 330538499 | 330538842 | 4.210000e-152 | 549.0 |
15 | TraesCS2D01G504000 | chr7B | 94.412 | 340 | 19 | 0 | 2368 | 2707 | 92559094 | 92558755 | 2.550000e-144 | 523.0 |
16 | TraesCS2D01G504000 | chr7B | 91.469 | 211 | 18 | 0 | 9 | 219 | 51917420 | 51917210 | 2.820000e-74 | 291.0 |
17 | TraesCS2D01G504000 | chr6B | 95.044 | 343 | 14 | 3 | 2367 | 2706 | 558517497 | 558517155 | 3.280000e-148 | 536.0 |
18 | TraesCS2D01G504000 | chr6B | 94.737 | 342 | 14 | 3 | 2368 | 2706 | 485115424 | 485115764 | 5.490000e-146 | 529.0 |
19 | TraesCS2D01G504000 | chr1A | 93.629 | 361 | 18 | 3 | 2368 | 2727 | 313906529 | 313906885 | 1.180000e-147 | 534.0 |
20 | TraesCS2D01G504000 | chr1A | 96.364 | 55 | 2 | 0 | 6809 | 6863 | 569419322 | 569419376 | 3.070000e-14 | 91.6 |
21 | TraesCS2D01G504000 | chr3B | 92.308 | 364 | 23 | 4 | 2361 | 2721 | 779338846 | 779338485 | 5.530000e-141 | 512.0 |
22 | TraesCS2D01G504000 | chr1B | 92.891 | 211 | 13 | 2 | 9 | 219 | 22267369 | 22267577 | 1.010000e-78 | 305.0 |
23 | TraesCS2D01G504000 | chr6A | 92.417 | 211 | 16 | 0 | 9 | 219 | 235219431 | 235219221 | 1.300000e-77 | 302.0 |
24 | TraesCS2D01G504000 | chr6A | 91.943 | 211 | 16 | 1 | 9 | 219 | 116896297 | 116896088 | 2.180000e-75 | 294.0 |
25 | TraesCS2D01G504000 | chr5D | 92.417 | 211 | 15 | 1 | 9 | 219 | 116908824 | 116909033 | 4.690000e-77 | 300.0 |
26 | TraesCS2D01G504000 | chr3A | 91.589 | 214 | 17 | 1 | 8 | 221 | 119407130 | 119406918 | 2.180000e-75 | 294.0 |
27 | TraesCS2D01G504000 | chr7D | 91.943 | 211 | 14 | 3 | 9 | 219 | 30895055 | 30894848 | 7.840000e-75 | 292.0 |
28 | TraesCS2D01G504000 | chr7A | 91.866 | 209 | 16 | 1 | 8 | 216 | 651435839 | 651436046 | 2.820000e-74 | 291.0 |
29 | TraesCS2D01G504000 | chr6D | 90.498 | 221 | 17 | 3 | 9 | 226 | 412624754 | 412624973 | 1.010000e-73 | 289.0 |
30 | TraesCS2D01G504000 | chr4A | 98.182 | 55 | 1 | 0 | 6809 | 6863 | 624664423 | 624664369 | 6.600000e-16 | 97.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G504000 | chr2D | 598713248 | 598721234 | 7986 | True | 14750.000000 | 14750 | 100.0000 | 1 | 7987 | 1 | chr2D.!!$R2 | 7986 |
1 | TraesCS2D01G504000 | chr2B | 726546352 | 726554701 | 8349 | True | 2291.400000 | 4473 | 94.6856 | 360 | 7987 | 5 | chr2B.!!$R1 | 7627 |
2 | TraesCS2D01G504000 | chr2A | 732580873 | 732589049 | 8176 | True | 1552.233333 | 3834 | 92.8900 | 362 | 7987 | 6 | chr2A.!!$R1 | 7625 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
199 | 200 | 0.022106 | CGTTTAGTTCGCGAGCTTCG | 59.978 | 55.000 | 30.27 | 24.87 | 43.89 | 3.79 | F |
265 | 266 | 0.037590 | AGCAATACAAGTCGGCCCAA | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 | F |
290 | 291 | 0.176680 | CTACACACAGCCTAGCCCAG | 59.823 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 | F |
297 | 298 | 0.322816 | CAGCCTAGCCCAGCAAAGAA | 60.323 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 | F |
298 | 299 | 0.405585 | AGCCTAGCCCAGCAAAGAAA | 59.594 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 | F |
857 | 864 | 0.693622 | TTGTCCCATTTACCTCCGCA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 | F |
2385 | 2543 | 0.742990 | TACTAGCAATGTGCCCGTGC | 60.743 | 55.000 | 0.00 | 0.00 | 46.52 | 5.34 | F |
3408 | 3734 | 0.190815 | AAACCCCAAGCAGGAATGGT | 59.809 | 50.000 | 0.00 | 0.00 | 41.22 | 3.55 | F |
3983 | 4314 | 0.588252 | CAGTTTTCTGCCAGGTCACG | 59.412 | 55.000 | 0.00 | 0.00 | 41.24 | 4.35 | F |
4285 | 4625 | 0.599558 | GTGCAGTCACATGTTGGCAT | 59.400 | 50.000 | 12.00 | 0.00 | 42.66 | 4.40 | F |
5753 | 6760 | 1.000955 | AGGCACAGTGAAGTCGGTTAG | 59.999 | 52.381 | 4.15 | 0.00 | 0.00 | 2.34 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1905 | 1970 | 0.696501 | TTGAGCAGTTCCCTAACCCC | 59.303 | 55.000 | 0.00 | 0.00 | 36.15 | 4.95 | R |
1913 | 1978 | 1.452108 | CCCGGGATTGAGCAGTTCC | 60.452 | 63.158 | 18.48 | 0.00 | 0.00 | 3.62 | R |
2109 | 2264 | 3.517500 | AGTCCAGGAAAGAAGAGATGACC | 59.482 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 | R |
2277 | 2435 | 4.634184 | TGACTCGCTGTAAGGAACTATC | 57.366 | 45.455 | 0.00 | 0.00 | 38.49 | 2.08 | R |
2508 | 2668 | 2.619074 | CCCTCCCTCACCTCATCAAAAC | 60.619 | 54.545 | 0.00 | 0.00 | 0.00 | 2.43 | R |
2591 | 2751 | 1.277557 | AGTTGTGGCCTTTTTGCAACA | 59.722 | 42.857 | 3.32 | 0.00 | 43.34 | 3.33 | R |
3508 | 3834 | 0.179936 | GGTGATGCTTGGAGAGGAGG | 59.820 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 | R |
4537 | 4877 | 0.815734 | CTTCATCACGAGTACCCGGT | 59.184 | 55.000 | 0.75 | 0.00 | 0.00 | 5.28 | R |
5805 | 6815 | 0.038166 | AACCATGGACAACATCGCCT | 59.962 | 50.000 | 21.47 | 0.00 | 37.84 | 5.52 | R |
6251 | 7661 | 0.035439 | ACATTACCCGTTGGCAGAGG | 60.035 | 55.000 | 3.64 | 3.64 | 33.59 | 3.69 | R |
7261 | 8744 | 0.099968 | CAGATTGATTGCAGGGCGTG | 59.900 | 55.000 | 2.14 | 2.14 | 0.00 | 5.34 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
21 | 22 | 3.528532 | ACGCAGCCTGTATTTTACTACC | 58.471 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
22 | 23 | 2.870411 | CGCAGCCTGTATTTTACTACCC | 59.130 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
23 | 24 | 3.211865 | GCAGCCTGTATTTTACTACCCC | 58.788 | 50.000 | 0.00 | 0.00 | 0.00 | 4.95 |
24 | 25 | 3.371166 | GCAGCCTGTATTTTACTACCCCA | 60.371 | 47.826 | 0.00 | 0.00 | 0.00 | 4.96 |
25 | 26 | 4.850680 | CAGCCTGTATTTTACTACCCCAA | 58.149 | 43.478 | 0.00 | 0.00 | 0.00 | 4.12 |
26 | 27 | 5.258051 | CAGCCTGTATTTTACTACCCCAAA | 58.742 | 41.667 | 0.00 | 0.00 | 0.00 | 3.28 |
27 | 28 | 5.712917 | CAGCCTGTATTTTACTACCCCAAAA | 59.287 | 40.000 | 0.00 | 0.00 | 0.00 | 2.44 |
28 | 29 | 6.209788 | CAGCCTGTATTTTACTACCCCAAAAA | 59.790 | 38.462 | 0.00 | 0.00 | 0.00 | 1.94 |
62 | 63 | 6.544038 | TTTTTACCAAGCCTAACGAGTTAC | 57.456 | 37.500 | 0.00 | 0.00 | 0.00 | 2.50 |
63 | 64 | 4.870123 | TTACCAAGCCTAACGAGTTACA | 57.130 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
64 | 65 | 3.036075 | ACCAAGCCTAACGAGTTACAC | 57.964 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
65 | 66 | 1.990563 | CCAAGCCTAACGAGTTACACG | 59.009 | 52.381 | 0.00 | 0.00 | 0.00 | 4.49 |
66 | 67 | 2.352030 | CCAAGCCTAACGAGTTACACGA | 60.352 | 50.000 | 9.40 | 0.00 | 34.70 | 4.35 |
67 | 68 | 2.915463 | CAAGCCTAACGAGTTACACGAG | 59.085 | 50.000 | 9.40 | 0.00 | 34.70 | 4.18 |
68 | 69 | 2.157738 | AGCCTAACGAGTTACACGAGT | 58.842 | 47.619 | 9.40 | 0.00 | 34.70 | 4.18 |
69 | 70 | 3.338249 | AGCCTAACGAGTTACACGAGTA | 58.662 | 45.455 | 9.40 | 0.00 | 34.70 | 2.59 |
70 | 71 | 3.126000 | AGCCTAACGAGTTACACGAGTAC | 59.874 | 47.826 | 9.40 | 0.00 | 34.70 | 2.73 |
71 | 72 | 3.126000 | GCCTAACGAGTTACACGAGTACT | 59.874 | 47.826 | 9.40 | 0.00 | 34.70 | 2.73 |
72 | 73 | 4.726306 | GCCTAACGAGTTACACGAGTACTC | 60.726 | 50.000 | 13.18 | 13.18 | 34.70 | 2.59 |
83 | 84 | 2.376915 | CGAGTACTCGTGAGATCAGC | 57.623 | 55.000 | 32.24 | 0.00 | 46.99 | 4.26 |
84 | 85 | 1.937223 | CGAGTACTCGTGAGATCAGCT | 59.063 | 52.381 | 32.24 | 0.00 | 46.99 | 4.24 |
85 | 86 | 2.033236 | CGAGTACTCGTGAGATCAGCTC | 60.033 | 54.545 | 32.24 | 0.00 | 46.99 | 4.09 |
86 | 87 | 5.404155 | CGAGTACTCGTGAGATCAGCTCG | 62.404 | 56.522 | 32.24 | 7.02 | 46.99 | 5.03 |
96 | 97 | 4.849111 | GAGATCAGCTCGTTTAACTTGG | 57.151 | 45.455 | 0.00 | 0.00 | 33.17 | 3.61 |
97 | 98 | 4.246458 | GAGATCAGCTCGTTTAACTTGGT | 58.754 | 43.478 | 0.00 | 0.00 | 33.17 | 3.67 |
98 | 99 | 4.642429 | AGATCAGCTCGTTTAACTTGGTT | 58.358 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
99 | 100 | 5.063880 | AGATCAGCTCGTTTAACTTGGTTT | 58.936 | 37.500 | 0.00 | 0.00 | 0.00 | 3.27 |
100 | 101 | 4.545823 | TCAGCTCGTTTAACTTGGTTTG | 57.454 | 40.909 | 0.00 | 0.00 | 0.00 | 2.93 |
101 | 102 | 3.942748 | TCAGCTCGTTTAACTTGGTTTGT | 59.057 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
102 | 103 | 5.117584 | TCAGCTCGTTTAACTTGGTTTGTA | 58.882 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
103 | 104 | 5.585445 | TCAGCTCGTTTAACTTGGTTTGTAA | 59.415 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
104 | 105 | 6.093771 | TCAGCTCGTTTAACTTGGTTTGTAAA | 59.906 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
105 | 106 | 6.195798 | CAGCTCGTTTAACTTGGTTTGTAAAC | 59.804 | 38.462 | 0.00 | 0.00 | 38.17 | 2.01 |
106 | 107 | 5.170092 | GCTCGTTTAACTTGGTTTGTAAACG | 59.830 | 40.000 | 17.07 | 17.07 | 46.05 | 3.60 |
109 | 110 | 7.299053 | CGTTTAACTTGGTTTGTAAACGATC | 57.701 | 36.000 | 17.90 | 0.00 | 46.98 | 3.69 |
110 | 111 | 7.127686 | CGTTTAACTTGGTTTGTAAACGATCT | 58.872 | 34.615 | 17.90 | 0.00 | 46.98 | 2.75 |
111 | 112 | 7.641020 | CGTTTAACTTGGTTTGTAAACGATCTT | 59.359 | 33.333 | 17.90 | 0.00 | 46.98 | 2.40 |
112 | 113 | 9.934190 | GTTTAACTTGGTTTGTAAACGATCTTA | 57.066 | 29.630 | 0.00 | 0.00 | 39.77 | 2.10 |
129 | 130 | 9.994432 | AACGATCTTAAATTAAATCTCAGCTTG | 57.006 | 29.630 | 0.00 | 0.00 | 0.00 | 4.01 |
130 | 131 | 8.616076 | ACGATCTTAAATTAAATCTCAGCTTGG | 58.384 | 33.333 | 0.00 | 0.00 | 0.00 | 3.61 |
131 | 132 | 7.589221 | CGATCTTAAATTAAATCTCAGCTTGGC | 59.411 | 37.037 | 0.00 | 0.00 | 0.00 | 4.52 |
132 | 133 | 7.944729 | TCTTAAATTAAATCTCAGCTTGGCT | 57.055 | 32.000 | 0.00 | 0.00 | 40.77 | 4.75 |
133 | 134 | 7.989826 | TCTTAAATTAAATCTCAGCTTGGCTC | 58.010 | 34.615 | 0.00 | 0.00 | 36.40 | 4.70 |
134 | 135 | 4.889832 | AATTAAATCTCAGCTTGGCTCG | 57.110 | 40.909 | 0.00 | 0.00 | 36.40 | 5.03 |
135 | 136 | 3.334583 | TTAAATCTCAGCTTGGCTCGT | 57.665 | 42.857 | 0.00 | 0.00 | 36.40 | 4.18 |
136 | 137 | 2.191128 | AAATCTCAGCTTGGCTCGTT | 57.809 | 45.000 | 0.00 | 0.00 | 36.40 | 3.85 |
137 | 138 | 3.334583 | AAATCTCAGCTTGGCTCGTTA | 57.665 | 42.857 | 0.00 | 0.00 | 36.40 | 3.18 |
138 | 139 | 3.550437 | AATCTCAGCTTGGCTCGTTAT | 57.450 | 42.857 | 0.00 | 0.00 | 36.40 | 1.89 |
139 | 140 | 3.550437 | ATCTCAGCTTGGCTCGTTATT | 57.450 | 42.857 | 0.00 | 0.00 | 36.40 | 1.40 |
140 | 141 | 3.334583 | TCTCAGCTTGGCTCGTTATTT | 57.665 | 42.857 | 0.00 | 0.00 | 36.40 | 1.40 |
141 | 142 | 3.674997 | TCTCAGCTTGGCTCGTTATTTT | 58.325 | 40.909 | 0.00 | 0.00 | 36.40 | 1.82 |
142 | 143 | 4.072131 | TCTCAGCTTGGCTCGTTATTTTT | 58.928 | 39.130 | 0.00 | 0.00 | 36.40 | 1.94 |
160 | 161 | 4.624721 | TTTTTGAGTTCGAGTCGATTCG | 57.375 | 40.909 | 22.71 | 22.71 | 41.79 | 3.34 |
161 | 162 | 3.547649 | TTTGAGTTCGAGTCGATTCGA | 57.452 | 42.857 | 26.49 | 26.49 | 46.86 | 3.71 |
165 | 166 | 2.707646 | TCGAGTCGATTCGAGCCG | 59.292 | 61.111 | 26.49 | 15.02 | 44.00 | 5.52 |
166 | 167 | 1.812507 | TCGAGTCGATTCGAGCCGA | 60.813 | 57.895 | 26.49 | 21.24 | 44.00 | 5.54 |
167 | 168 | 1.368255 | CGAGTCGATTCGAGCCGAG | 60.368 | 63.158 | 24.13 | 0.00 | 43.03 | 4.63 |
168 | 169 | 1.722677 | GAGTCGATTCGAGCCGAGT | 59.277 | 57.895 | 9.42 | 15.57 | 40.67 | 4.18 |
169 | 170 | 0.316360 | GAGTCGATTCGAGCCGAGTC | 60.316 | 60.000 | 21.86 | 21.86 | 44.50 | 3.36 |
170 | 171 | 1.025113 | AGTCGATTCGAGCCGAGTCA | 61.025 | 55.000 | 9.42 | 5.22 | 41.49 | 3.41 |
171 | 172 | 0.862283 | GTCGATTCGAGCCGAGTCAC | 60.862 | 60.000 | 9.42 | 11.09 | 41.49 | 3.67 |
172 | 173 | 1.934956 | CGATTCGAGCCGAGTCACG | 60.935 | 63.158 | 16.14 | 9.19 | 41.49 | 4.35 |
173 | 174 | 1.428219 | GATTCGAGCCGAGTCACGA | 59.572 | 57.895 | 12.77 | 0.00 | 45.77 | 4.35 |
174 | 175 | 0.590230 | GATTCGAGCCGAGTCACGAG | 60.590 | 60.000 | 12.77 | 0.00 | 45.77 | 4.18 |
175 | 176 | 2.600122 | ATTCGAGCCGAGTCACGAGC | 62.600 | 60.000 | 0.00 | 0.00 | 45.77 | 5.03 |
176 | 177 | 3.805307 | CGAGCCGAGTCACGAGCT | 61.805 | 66.667 | 5.61 | 5.61 | 45.57 | 4.09 |
177 | 178 | 2.461945 | CGAGCCGAGTCACGAGCTA | 61.462 | 63.158 | 5.84 | 0.00 | 44.01 | 3.32 |
178 | 179 | 1.062845 | GAGCCGAGTCACGAGCTAC | 59.937 | 63.158 | 5.84 | 0.00 | 44.01 | 3.58 |
179 | 180 | 1.370587 | GAGCCGAGTCACGAGCTACT | 61.371 | 60.000 | 5.84 | 0.00 | 44.01 | 2.57 |
180 | 181 | 1.062845 | GCCGAGTCACGAGCTACTC | 59.937 | 63.158 | 4.54 | 4.54 | 45.77 | 2.59 |
192 | 193 | 1.838943 | GAGCTACTCGTTTAGTTCGCG | 59.161 | 52.381 | 0.00 | 0.00 | 39.80 | 5.87 |
193 | 194 | 1.466167 | AGCTACTCGTTTAGTTCGCGA | 59.534 | 47.619 | 3.71 | 3.71 | 39.80 | 5.87 |
196 | 197 | 3.017232 | CTCGTTTAGTTCGCGAGCT | 57.983 | 52.632 | 28.32 | 28.32 | 44.03 | 4.09 |
197 | 198 | 1.337821 | CTCGTTTAGTTCGCGAGCTT | 58.662 | 50.000 | 30.27 | 14.52 | 44.03 | 3.74 |
198 | 199 | 1.317904 | CTCGTTTAGTTCGCGAGCTTC | 59.682 | 52.381 | 30.27 | 18.62 | 44.03 | 3.86 |
199 | 200 | 0.022106 | CGTTTAGTTCGCGAGCTTCG | 59.978 | 55.000 | 30.27 | 24.87 | 43.89 | 3.79 |
200 | 201 | 1.334054 | GTTTAGTTCGCGAGCTTCGA | 58.666 | 50.000 | 30.27 | 14.13 | 43.74 | 3.71 |
201 | 202 | 1.317904 | GTTTAGTTCGCGAGCTTCGAG | 59.682 | 52.381 | 30.27 | 7.36 | 43.74 | 4.04 |
202 | 203 | 0.797249 | TTAGTTCGCGAGCTTCGAGC | 60.797 | 55.000 | 30.27 | 14.89 | 43.74 | 5.03 |
227 | 228 | 3.410631 | TTTTCAGCCCTAATCGTGACA | 57.589 | 42.857 | 0.00 | 0.00 | 0.00 | 3.58 |
228 | 229 | 3.410631 | TTTCAGCCCTAATCGTGACAA | 57.589 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
229 | 230 | 3.410631 | TTCAGCCCTAATCGTGACAAA | 57.589 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
230 | 231 | 3.410631 | TCAGCCCTAATCGTGACAAAA | 57.589 | 42.857 | 0.00 | 0.00 | 0.00 | 2.44 |
231 | 232 | 3.334691 | TCAGCCCTAATCGTGACAAAAG | 58.665 | 45.455 | 0.00 | 0.00 | 0.00 | 2.27 |
232 | 233 | 2.084546 | AGCCCTAATCGTGACAAAAGC | 58.915 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
233 | 234 | 2.084546 | GCCCTAATCGTGACAAAAGCT | 58.915 | 47.619 | 0.00 | 0.00 | 0.00 | 3.74 |
234 | 235 | 3.055385 | AGCCCTAATCGTGACAAAAGCTA | 60.055 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
235 | 236 | 3.063588 | GCCCTAATCGTGACAAAAGCTAC | 59.936 | 47.826 | 0.00 | 0.00 | 0.00 | 3.58 |
236 | 237 | 4.250464 | CCCTAATCGTGACAAAAGCTACA | 58.750 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
237 | 238 | 4.876107 | CCCTAATCGTGACAAAAGCTACAT | 59.124 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
238 | 239 | 5.220662 | CCCTAATCGTGACAAAAGCTACATG | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 3.21 |
239 | 240 | 5.351465 | CCTAATCGTGACAAAAGCTACATGT | 59.649 | 40.000 | 2.69 | 2.69 | 0.00 | 3.21 |
240 | 241 | 4.668576 | ATCGTGACAAAAGCTACATGTG | 57.331 | 40.909 | 9.11 | 0.00 | 0.00 | 3.21 |
241 | 242 | 3.462982 | TCGTGACAAAAGCTACATGTGT | 58.537 | 40.909 | 9.11 | 0.00 | 0.00 | 3.72 |
242 | 243 | 3.493129 | TCGTGACAAAAGCTACATGTGTC | 59.507 | 43.478 | 9.11 | 6.02 | 39.22 | 3.67 |
243 | 244 | 3.494626 | CGTGACAAAAGCTACATGTGTCT | 59.505 | 43.478 | 9.11 | 1.99 | 39.45 | 3.41 |
244 | 245 | 4.376413 | CGTGACAAAAGCTACATGTGTCTC | 60.376 | 45.833 | 9.11 | 5.59 | 39.45 | 3.36 |
245 | 246 | 3.740832 | TGACAAAAGCTACATGTGTCTCG | 59.259 | 43.478 | 9.11 | 1.05 | 39.45 | 4.04 |
246 | 247 | 3.987868 | GACAAAAGCTACATGTGTCTCGA | 59.012 | 43.478 | 9.11 | 0.00 | 36.50 | 4.04 |
247 | 248 | 3.990469 | ACAAAAGCTACATGTGTCTCGAG | 59.010 | 43.478 | 9.11 | 5.93 | 0.00 | 4.04 |
248 | 249 | 2.285827 | AAGCTACATGTGTCTCGAGC | 57.714 | 50.000 | 9.11 | 8.33 | 0.00 | 5.03 |
249 | 250 | 1.177401 | AGCTACATGTGTCTCGAGCA | 58.823 | 50.000 | 16.25 | 6.50 | 30.51 | 4.26 |
250 | 251 | 1.546029 | AGCTACATGTGTCTCGAGCAA | 59.454 | 47.619 | 16.25 | 0.00 | 30.51 | 3.91 |
251 | 252 | 2.167281 | AGCTACATGTGTCTCGAGCAAT | 59.833 | 45.455 | 16.25 | 3.71 | 30.51 | 3.56 |
252 | 253 | 3.381590 | AGCTACATGTGTCTCGAGCAATA | 59.618 | 43.478 | 16.25 | 2.93 | 30.51 | 1.90 |
253 | 254 | 3.487574 | GCTACATGTGTCTCGAGCAATAC | 59.512 | 47.826 | 9.11 | 0.73 | 0.00 | 1.89 |
254 | 255 | 3.592898 | ACATGTGTCTCGAGCAATACA | 57.407 | 42.857 | 7.81 | 6.86 | 0.00 | 2.29 |
255 | 256 | 3.925379 | ACATGTGTCTCGAGCAATACAA | 58.075 | 40.909 | 7.81 | 0.00 | 0.00 | 2.41 |
256 | 257 | 3.928992 | ACATGTGTCTCGAGCAATACAAG | 59.071 | 43.478 | 7.81 | 6.16 | 0.00 | 3.16 |
257 | 258 | 3.660501 | TGTGTCTCGAGCAATACAAGT | 57.339 | 42.857 | 7.81 | 0.00 | 0.00 | 3.16 |
258 | 259 | 3.575630 | TGTGTCTCGAGCAATACAAGTC | 58.424 | 45.455 | 7.81 | 0.00 | 0.00 | 3.01 |
259 | 260 | 2.594654 | GTGTCTCGAGCAATACAAGTCG | 59.405 | 50.000 | 7.81 | 0.00 | 0.00 | 4.18 |
260 | 261 | 2.186076 | GTCTCGAGCAATACAAGTCGG | 58.814 | 52.381 | 7.81 | 0.00 | 33.21 | 4.79 |
261 | 262 | 0.924090 | CTCGAGCAATACAAGTCGGC | 59.076 | 55.000 | 0.00 | 0.00 | 33.21 | 5.54 |
262 | 263 | 0.459585 | TCGAGCAATACAAGTCGGCC | 60.460 | 55.000 | 0.00 | 0.00 | 33.21 | 6.13 |
263 | 264 | 1.429148 | CGAGCAATACAAGTCGGCCC | 61.429 | 60.000 | 0.00 | 0.00 | 0.00 | 5.80 |
264 | 265 | 0.392461 | GAGCAATACAAGTCGGCCCA | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
265 | 266 | 0.037590 | AGCAATACAAGTCGGCCCAA | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
266 | 267 | 0.885196 | GCAATACAAGTCGGCCCAAA | 59.115 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
267 | 268 | 1.402325 | GCAATACAAGTCGGCCCAAAC | 60.402 | 52.381 | 0.00 | 0.00 | 0.00 | 2.93 |
268 | 269 | 1.135803 | CAATACAAGTCGGCCCAAACG | 60.136 | 52.381 | 0.00 | 0.00 | 0.00 | 3.60 |
269 | 270 | 0.322322 | ATACAAGTCGGCCCAAACGA | 59.678 | 50.000 | 0.00 | 0.00 | 38.13 | 3.85 |
270 | 271 | 0.320073 | TACAAGTCGGCCCAAACGAG | 60.320 | 55.000 | 0.00 | 0.00 | 41.50 | 4.18 |
271 | 272 | 2.668550 | AAGTCGGCCCAAACGAGC | 60.669 | 61.111 | 0.00 | 0.00 | 41.50 | 5.03 |
272 | 273 | 3.178540 | AAGTCGGCCCAAACGAGCT | 62.179 | 57.895 | 0.00 | 0.00 | 41.50 | 4.09 |
273 | 274 | 1.823169 | AAGTCGGCCCAAACGAGCTA | 61.823 | 55.000 | 0.00 | 0.00 | 41.50 | 3.32 |
274 | 275 | 2.098831 | GTCGGCCCAAACGAGCTAC | 61.099 | 63.158 | 0.00 | 0.00 | 41.50 | 3.58 |
275 | 276 | 2.047655 | CGGCCCAAACGAGCTACA | 60.048 | 61.111 | 0.00 | 0.00 | 0.00 | 2.74 |
276 | 277 | 2.388232 | CGGCCCAAACGAGCTACAC | 61.388 | 63.158 | 0.00 | 0.00 | 0.00 | 2.90 |
277 | 278 | 1.302192 | GGCCCAAACGAGCTACACA | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 3.72 |
278 | 279 | 1.574702 | GGCCCAAACGAGCTACACAC | 61.575 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
279 | 280 | 0.882927 | GCCCAAACGAGCTACACACA | 60.883 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
280 | 281 | 1.148310 | CCCAAACGAGCTACACACAG | 58.852 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
281 | 282 | 0.512952 | CCAAACGAGCTACACACAGC | 59.487 | 55.000 | 0.00 | 0.00 | 42.12 | 4.40 |
282 | 283 | 0.512952 | CAAACGAGCTACACACAGCC | 59.487 | 55.000 | 0.00 | 0.00 | 42.84 | 4.85 |
283 | 284 | 0.393077 | AAACGAGCTACACACAGCCT | 59.607 | 50.000 | 0.00 | 0.00 | 42.84 | 4.58 |
284 | 285 | 1.254026 | AACGAGCTACACACAGCCTA | 58.746 | 50.000 | 0.00 | 0.00 | 42.84 | 3.93 |
285 | 286 | 0.811915 | ACGAGCTACACACAGCCTAG | 59.188 | 55.000 | 0.00 | 0.00 | 42.84 | 3.02 |
286 | 287 | 0.526524 | CGAGCTACACACAGCCTAGC | 60.527 | 60.000 | 0.00 | 0.00 | 42.84 | 3.42 |
287 | 288 | 0.179097 | GAGCTACACACAGCCTAGCC | 60.179 | 60.000 | 0.00 | 0.00 | 42.84 | 3.93 |
288 | 289 | 1.153349 | GCTACACACAGCCTAGCCC | 60.153 | 63.158 | 0.00 | 0.00 | 35.40 | 5.19 |
289 | 290 | 1.899437 | GCTACACACAGCCTAGCCCA | 61.899 | 60.000 | 0.00 | 0.00 | 35.40 | 5.36 |
290 | 291 | 0.176680 | CTACACACAGCCTAGCCCAG | 59.823 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
291 | 292 | 1.899437 | TACACACAGCCTAGCCCAGC | 61.899 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
292 | 293 | 2.930019 | ACACAGCCTAGCCCAGCA | 60.930 | 61.111 | 0.00 | 0.00 | 0.00 | 4.41 |
293 | 294 | 2.352422 | CACAGCCTAGCCCAGCAA | 59.648 | 61.111 | 0.00 | 0.00 | 0.00 | 3.91 |
294 | 295 | 1.303561 | CACAGCCTAGCCCAGCAAA | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 3.68 |
295 | 296 | 1.001641 | ACAGCCTAGCCCAGCAAAG | 60.002 | 57.895 | 0.00 | 0.00 | 0.00 | 2.77 |
296 | 297 | 1.300963 | CAGCCTAGCCCAGCAAAGA | 59.699 | 57.895 | 0.00 | 0.00 | 0.00 | 2.52 |
297 | 298 | 0.322816 | CAGCCTAGCCCAGCAAAGAA | 60.323 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
298 | 299 | 0.405585 | AGCCTAGCCCAGCAAAGAAA | 59.594 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
299 | 300 | 1.006400 | AGCCTAGCCCAGCAAAGAAAT | 59.994 | 47.619 | 0.00 | 0.00 | 0.00 | 2.17 |
300 | 301 | 2.242196 | AGCCTAGCCCAGCAAAGAAATA | 59.758 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
301 | 302 | 2.359214 | GCCTAGCCCAGCAAAGAAATAC | 59.641 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
302 | 303 | 2.952310 | CCTAGCCCAGCAAAGAAATACC | 59.048 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
303 | 304 | 2.907458 | AGCCCAGCAAAGAAATACCT | 57.093 | 45.000 | 0.00 | 0.00 | 0.00 | 3.08 |
304 | 305 | 3.175438 | AGCCCAGCAAAGAAATACCTT | 57.825 | 42.857 | 0.00 | 0.00 | 0.00 | 3.50 |
305 | 306 | 2.827921 | AGCCCAGCAAAGAAATACCTTG | 59.172 | 45.455 | 0.00 | 0.00 | 0.00 | 3.61 |
306 | 307 | 2.675032 | GCCCAGCAAAGAAATACCTTGC | 60.675 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
307 | 308 | 2.094026 | CCCAGCAAAGAAATACCTTGCC | 60.094 | 50.000 | 2.58 | 0.00 | 0.00 | 4.52 |
308 | 309 | 2.415893 | CCAGCAAAGAAATACCTTGCCG | 60.416 | 50.000 | 2.58 | 0.00 | 0.00 | 5.69 |
309 | 310 | 1.202348 | AGCAAAGAAATACCTTGCCGC | 59.798 | 47.619 | 2.58 | 0.00 | 0.00 | 6.53 |
310 | 311 | 1.202348 | GCAAAGAAATACCTTGCCGCT | 59.798 | 47.619 | 0.00 | 0.00 | 0.00 | 5.52 |
311 | 312 | 2.732282 | GCAAAGAAATACCTTGCCGCTC | 60.732 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
312 | 313 | 2.749621 | CAAAGAAATACCTTGCCGCTCT | 59.250 | 45.455 | 0.00 | 0.00 | 0.00 | 4.09 |
313 | 314 | 2.789409 | AGAAATACCTTGCCGCTCTT | 57.211 | 45.000 | 0.00 | 0.00 | 0.00 | 2.85 |
314 | 315 | 3.906720 | AGAAATACCTTGCCGCTCTTA | 57.093 | 42.857 | 0.00 | 0.00 | 0.00 | 2.10 |
315 | 316 | 4.423625 | AGAAATACCTTGCCGCTCTTAT | 57.576 | 40.909 | 0.00 | 0.00 | 0.00 | 1.73 |
316 | 317 | 4.781934 | AGAAATACCTTGCCGCTCTTATT | 58.218 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
317 | 318 | 5.193679 | AGAAATACCTTGCCGCTCTTATTT | 58.806 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
318 | 319 | 4.900635 | AATACCTTGCCGCTCTTATTTG | 57.099 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
319 | 320 | 2.200373 | ACCTTGCCGCTCTTATTTGT | 57.800 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
320 | 321 | 2.514803 | ACCTTGCCGCTCTTATTTGTT | 58.485 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
321 | 322 | 2.890945 | ACCTTGCCGCTCTTATTTGTTT | 59.109 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
322 | 323 | 3.320826 | ACCTTGCCGCTCTTATTTGTTTT | 59.679 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
323 | 324 | 3.920412 | CCTTGCCGCTCTTATTTGTTTTC | 59.080 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
324 | 325 | 3.196007 | TGCCGCTCTTATTTGTTTTCG | 57.804 | 42.857 | 0.00 | 0.00 | 0.00 | 3.46 |
325 | 326 | 2.809119 | TGCCGCTCTTATTTGTTTTCGA | 59.191 | 40.909 | 0.00 | 0.00 | 0.00 | 3.71 |
326 | 327 | 3.251245 | TGCCGCTCTTATTTGTTTTCGAA | 59.749 | 39.130 | 0.00 | 0.00 | 0.00 | 3.71 |
327 | 328 | 4.223659 | GCCGCTCTTATTTGTTTTCGAAA | 58.776 | 39.130 | 6.47 | 6.47 | 0.00 | 3.46 |
328 | 329 | 4.677832 | GCCGCTCTTATTTGTTTTCGAAAA | 59.322 | 37.500 | 19.08 | 19.08 | 0.00 | 2.29 |
329 | 330 | 5.174216 | GCCGCTCTTATTTGTTTTCGAAAAA | 59.826 | 36.000 | 24.04 | 10.25 | 0.00 | 1.94 |
330 | 331 | 6.128929 | GCCGCTCTTATTTGTTTTCGAAAAAT | 60.129 | 34.615 | 24.04 | 16.35 | 0.00 | 1.82 |
331 | 332 | 7.437124 | CCGCTCTTATTTGTTTTCGAAAAATC | 58.563 | 34.615 | 24.04 | 13.67 | 0.00 | 2.17 |
332 | 333 | 7.151256 | CGCTCTTATTTGTTTTCGAAAAATCG | 58.849 | 34.615 | 24.04 | 10.09 | 0.00 | 3.34 |
333 | 334 | 6.942767 | GCTCTTATTTGTTTTCGAAAAATCGC | 59.057 | 34.615 | 24.04 | 12.64 | 0.00 | 4.58 |
334 | 335 | 7.358023 | GCTCTTATTTGTTTTCGAAAAATCGCA | 60.358 | 33.333 | 24.04 | 15.00 | 0.00 | 5.10 |
335 | 336 | 8.341477 | TCTTATTTGTTTTCGAAAAATCGCAA | 57.659 | 26.923 | 24.04 | 19.46 | 0.00 | 4.85 |
336 | 337 | 8.476142 | TCTTATTTGTTTTCGAAAAATCGCAAG | 58.524 | 29.630 | 24.04 | 21.13 | 0.00 | 4.01 |
354 | 355 | 7.627585 | TCGCAAGACGTAACATATAATAACC | 57.372 | 36.000 | 0.00 | 0.00 | 45.01 | 2.85 |
355 | 356 | 7.201835 | TCGCAAGACGTAACATATAATAACCA | 58.798 | 34.615 | 0.00 | 0.00 | 45.01 | 3.67 |
356 | 357 | 7.380333 | TCGCAAGACGTAACATATAATAACCAG | 59.620 | 37.037 | 0.00 | 0.00 | 45.01 | 4.00 |
357 | 358 | 7.358931 | CGCAAGACGTAACATATAATAACCAGG | 60.359 | 40.741 | 0.00 | 0.00 | 43.02 | 4.45 |
358 | 359 | 7.095355 | GCAAGACGTAACATATAATAACCAGGG | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 4.45 |
485 | 487 | 4.096003 | ATTCGTCCACCCGCCCAG | 62.096 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
594 | 596 | 3.196913 | TACGCACCGTCGCTGTTCA | 62.197 | 57.895 | 0.00 | 0.00 | 41.54 | 3.18 |
597 | 599 | 1.145759 | CGCACCGTCGCTGTTCATAT | 61.146 | 55.000 | 0.00 | 0.00 | 0.00 | 1.78 |
598 | 600 | 1.847818 | GCACCGTCGCTGTTCATATA | 58.152 | 50.000 | 0.00 | 0.00 | 0.00 | 0.86 |
599 | 601 | 1.521423 | GCACCGTCGCTGTTCATATAC | 59.479 | 52.381 | 0.00 | 0.00 | 0.00 | 1.47 |
600 | 602 | 2.798499 | GCACCGTCGCTGTTCATATACT | 60.798 | 50.000 | 0.00 | 0.00 | 0.00 | 2.12 |
601 | 603 | 3.043586 | CACCGTCGCTGTTCATATACTC | 58.956 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
602 | 604 | 2.034305 | ACCGTCGCTGTTCATATACTCC | 59.966 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
603 | 605 | 2.293677 | CCGTCGCTGTTCATATACTCCT | 59.706 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
604 | 606 | 3.556513 | CGTCGCTGTTCATATACTCCTC | 58.443 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
605 | 607 | 3.609644 | CGTCGCTGTTCATATACTCCTCC | 60.610 | 52.174 | 0.00 | 0.00 | 0.00 | 4.30 |
606 | 608 | 3.570550 | GTCGCTGTTCATATACTCCTCCT | 59.429 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
622 | 624 | 3.169099 | CCTCCTACATCGGAATCTGGAT | 58.831 | 50.000 | 0.00 | 0.00 | 31.44 | 3.41 |
648 | 651 | 7.037873 | TGGAGGTTACCAGTTAACATTACTCAT | 60.038 | 37.037 | 8.61 | 0.00 | 41.87 | 2.90 |
653 | 656 | 5.175859 | ACCAGTTAACATTACTCATCCGTG | 58.824 | 41.667 | 8.61 | 0.00 | 0.00 | 4.94 |
697 | 703 | 2.666190 | CACACCCGTCACAGCCAG | 60.666 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
698 | 704 | 4.626081 | ACACCCGTCACAGCCAGC | 62.626 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
712 | 718 | 4.559063 | CAGCTGGGCCCGATGGAG | 62.559 | 72.222 | 19.37 | 9.80 | 0.00 | 3.86 |
857 | 864 | 0.693622 | TTGTCCCATTTACCTCCGCA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
877 | 897 | 4.641645 | CCGCAACCAGTCCCTGCA | 62.642 | 66.667 | 0.00 | 0.00 | 35.78 | 4.41 |
878 | 898 | 2.594303 | CGCAACCAGTCCCTGCAA | 60.594 | 61.111 | 0.00 | 0.00 | 35.78 | 4.08 |
886 | 906 | 4.284550 | GTCCCTGCAAGTGGGCCA | 62.285 | 66.667 | 0.00 | 0.00 | 44.23 | 5.36 |
1030 | 1061 | 2.997897 | GTCACACGCTCCCCCTCT | 60.998 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
1312 | 1377 | 2.754658 | GAGGAGGACGGCTCCGAA | 60.755 | 66.667 | 15.95 | 0.00 | 45.24 | 4.30 |
1366 | 1431 | 1.750399 | CCCCCATTGTCTCCGCTTG | 60.750 | 63.158 | 0.00 | 0.00 | 0.00 | 4.01 |
1394 | 1459 | 2.202623 | CGTGTAGTGAGCTCCGGC | 60.203 | 66.667 | 12.15 | 1.36 | 39.06 | 6.13 |
1532 | 1597 | 7.042051 | TCGGTTTTGACTTCTCAAATTAGAGTG | 60.042 | 37.037 | 0.00 | 0.00 | 44.24 | 3.51 |
1584 | 1649 | 1.812571 | CTGTTGGCAGTAATGGTGGAC | 59.187 | 52.381 | 0.00 | 0.00 | 37.92 | 4.02 |
1588 | 1653 | 1.644786 | GGCAGTAATGGTGGACGCAC | 61.645 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1722 | 1787 | 5.527951 | TGTGGAATTTGAAAATTGAGACGG | 58.472 | 37.500 | 5.76 | 0.00 | 38.64 | 4.79 |
1764 | 1829 | 2.173569 | ACCTCAGTCAAGAGCTTTGGTT | 59.826 | 45.455 | 8.23 | 0.00 | 34.26 | 3.67 |
1775 | 1840 | 4.464947 | AGAGCTTTGGTTAGACTTGCTTT | 58.535 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
1797 | 1862 | 7.523873 | GCTTTATTTTGAGTGGGAAGCTACTTT | 60.524 | 37.037 | 0.00 | 0.00 | 36.15 | 2.66 |
1824 | 1889 | 8.383175 | GGAGGTACTATTTGGAATGAATATGGA | 58.617 | 37.037 | 0.00 | 0.00 | 41.55 | 3.41 |
1833 | 1898 | 6.211587 | TGGAATGAATATGGAAGTTGCTTG | 57.788 | 37.500 | 0.00 | 0.00 | 0.00 | 4.01 |
1887 | 1952 | 7.725844 | AGGTATTTGGAATGAATATGGGAGTTC | 59.274 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
1890 | 1955 | 6.773976 | TTGGAATGAATATGGGAGTTCAAC | 57.226 | 37.500 | 0.00 | 0.00 | 37.82 | 3.18 |
1891 | 1956 | 6.078456 | TGGAATGAATATGGGAGTTCAACT | 57.922 | 37.500 | 0.00 | 0.00 | 37.82 | 3.16 |
1905 | 1970 | 4.557205 | AGTTCAACTAGTTAGTTCTGGCG | 58.443 | 43.478 | 8.04 | 0.00 | 44.19 | 5.69 |
1913 | 1978 | 0.906775 | TTAGTTCTGGCGGGGTTAGG | 59.093 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
1944 | 2009 | 2.710096 | TCCCGGGTTCAGAAATGATC | 57.290 | 50.000 | 22.86 | 0.00 | 0.00 | 2.92 |
1945 | 2010 | 1.912731 | TCCCGGGTTCAGAAATGATCA | 59.087 | 47.619 | 22.86 | 0.00 | 0.00 | 2.92 |
1947 | 2012 | 3.088532 | CCCGGGTTCAGAAATGATCAAA | 58.911 | 45.455 | 14.18 | 0.00 | 0.00 | 2.69 |
1948 | 2013 | 3.701040 | CCCGGGTTCAGAAATGATCAAAT | 59.299 | 43.478 | 14.18 | 0.00 | 0.00 | 2.32 |
1949 | 2014 | 4.440525 | CCCGGGTTCAGAAATGATCAAATG | 60.441 | 45.833 | 14.18 | 0.00 | 0.00 | 2.32 |
1950 | 2015 | 4.398988 | CCGGGTTCAGAAATGATCAAATGA | 59.601 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
1951 | 2016 | 5.068198 | CCGGGTTCAGAAATGATCAAATGAT | 59.932 | 40.000 | 0.00 | 0.00 | 37.51 | 2.45 |
1952 | 2017 | 5.975344 | CGGGTTCAGAAATGATCAAATGATG | 59.025 | 40.000 | 0.00 | 0.00 | 34.37 | 3.07 |
1953 | 2018 | 6.278363 | GGGTTCAGAAATGATCAAATGATGG | 58.722 | 40.000 | 0.00 | 0.00 | 34.37 | 3.51 |
1954 | 2019 | 6.097270 | GGGTTCAGAAATGATCAAATGATGGA | 59.903 | 38.462 | 0.00 | 0.00 | 34.37 | 3.41 |
1955 | 2020 | 7.364056 | GGGTTCAGAAATGATCAAATGATGGAA | 60.364 | 37.037 | 0.00 | 0.00 | 34.37 | 3.53 |
1965 | 2030 | 7.541162 | TGATCAAATGATGGAAAATCTGTCAC | 58.459 | 34.615 | 0.00 | 0.00 | 34.37 | 3.67 |
1967 | 2032 | 7.528996 | TCAAATGATGGAAAATCTGTCACTT | 57.471 | 32.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2109 | 2264 | 1.466167 | CTTTGACCTCAGTTGCATCGG | 59.534 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
2161 | 2316 | 3.969553 | TGTCCTCACACTGCTATCTACT | 58.030 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2262 | 2420 | 3.499918 | CAGATGGAAATGAAGATACCCGC | 59.500 | 47.826 | 0.00 | 0.00 | 0.00 | 6.13 |
2263 | 2421 | 3.136443 | AGATGGAAATGAAGATACCCGCA | 59.864 | 43.478 | 0.00 | 0.00 | 0.00 | 5.69 |
2277 | 2435 | 0.937304 | CCCGCAATACTCATGGAACG | 59.063 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2385 | 2543 | 0.742990 | TACTAGCAATGTGCCCGTGC | 60.743 | 55.000 | 0.00 | 0.00 | 46.52 | 5.34 |
2442 | 2601 | 7.381139 | TGTTCACAAACTTGAAAGAAAACACTC | 59.619 | 33.333 | 0.00 | 0.00 | 37.24 | 3.51 |
2508 | 2668 | 5.180117 | CACTCAAAATATATTCCTCGGGCTG | 59.820 | 44.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2586 | 2746 | 2.490903 | CAAATTGGAGCAGAGAAGTGGG | 59.509 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2591 | 2751 | 1.488393 | GGAGCAGAGAAGTGGGCTATT | 59.512 | 52.381 | 0.00 | 0.00 | 36.59 | 1.73 |
2618 | 2778 | 3.595190 | AAAAGGCCACAACTTACCTCT | 57.405 | 42.857 | 5.01 | 0.00 | 0.00 | 3.69 |
2623 | 2783 | 2.224548 | GGCCACAACTTACCTCTCAGTT | 60.225 | 50.000 | 0.00 | 0.00 | 33.29 | 3.16 |
2661 | 2821 | 2.972625 | TGGTCAGAAATGACGGATGAC | 58.027 | 47.619 | 2.56 | 0.00 | 39.57 | 3.06 |
2665 | 2825 | 4.437239 | GTCAGAAATGACGGATGACAGAT | 58.563 | 43.478 | 0.00 | 0.00 | 39.97 | 2.90 |
2674 | 2834 | 3.031013 | ACGGATGACAGATACACCATCA | 58.969 | 45.455 | 0.00 | 0.00 | 37.67 | 3.07 |
2707 | 2867 | 9.349713 | ACTGAGTCTTTTATAGGAGTAGAGATG | 57.650 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
2708 | 2868 | 9.349713 | CTGAGTCTTTTATAGGAGTAGAGATGT | 57.650 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
2733 | 2893 | 8.425491 | GTGCGTGCTAATATGTATAGTTAGTTG | 58.575 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
2734 | 2894 | 8.354426 | TGCGTGCTAATATGTATAGTTAGTTGA | 58.646 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
2920 | 3246 | 7.550906 | GGTCTTGTGAGCTTCTATAATGAACTT | 59.449 | 37.037 | 0.00 | 0.00 | 37.68 | 2.66 |
2925 | 3251 | 9.719355 | TGTGAGCTTCTATAATGAACTTTAACA | 57.281 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
3017 | 3343 | 7.728847 | ATAATGAACTGCAGCGACATATTTA | 57.271 | 32.000 | 15.27 | 7.77 | 0.00 | 1.40 |
3053 | 3379 | 7.821359 | TGAATCAGAGGAAAGACAAAGTGATAG | 59.179 | 37.037 | 0.00 | 0.00 | 0.00 | 2.08 |
3106 | 3432 | 1.609061 | GGCTCTCTTTAGCAGTGCACA | 60.609 | 52.381 | 21.04 | 0.90 | 44.64 | 4.57 |
3127 | 3453 | 4.884164 | ACAGCTAAGAAAAGAGTGCAGTTT | 59.116 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
3343 | 3669 | 5.591643 | AAAGCTATTACAGTCACGTGTTG | 57.408 | 39.130 | 16.51 | 16.92 | 31.46 | 3.33 |
3408 | 3734 | 0.190815 | AAACCCCAAGCAGGAATGGT | 59.809 | 50.000 | 0.00 | 0.00 | 41.22 | 3.55 |
3508 | 3834 | 2.437413 | CTGGTAACTTTTCTCCTGGCC | 58.563 | 52.381 | 0.00 | 0.00 | 37.61 | 5.36 |
3591 | 3917 | 3.020274 | GGAAGAGAAAAGGCAGGGATTC | 58.980 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3618 | 3944 | 1.588239 | AGCCTGAAGATCATGGACCA | 58.412 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3749 | 4080 | 4.218635 | TGGTTGCTTCTGTTGTTGTTTACA | 59.781 | 37.500 | 0.00 | 0.00 | 34.12 | 2.41 |
3785 | 4116 | 2.092753 | TCTCATGCAGGACCTCAAATCC | 60.093 | 50.000 | 0.00 | 0.00 | 36.38 | 3.01 |
3814 | 4145 | 3.619038 | GGTTCTCCTGTCGATTTAGCAAG | 59.381 | 47.826 | 0.00 | 0.00 | 0.00 | 4.01 |
3884 | 4215 | 4.019681 | AGTCGGAGATTTAAATCACCACCA | 60.020 | 41.667 | 31.37 | 18.56 | 43.67 | 4.17 |
3983 | 4314 | 0.588252 | CAGTTTTCTGCCAGGTCACG | 59.412 | 55.000 | 0.00 | 0.00 | 41.24 | 4.35 |
4196 | 4529 | 4.329801 | TGCATTTGCTATTGACTGTAGACG | 59.670 | 41.667 | 3.94 | 0.00 | 42.66 | 4.18 |
4249 | 4582 | 9.433317 | GTGACCGTATTTGATATAAACATGTTG | 57.567 | 33.333 | 12.82 | 0.00 | 0.00 | 3.33 |
4283 | 4623 | 4.950744 | GTGCAGTCACATGTTGGC | 57.049 | 55.556 | 0.00 | 0.00 | 42.66 | 4.52 |
4284 | 4624 | 2.032170 | GTGCAGTCACATGTTGGCA | 58.968 | 52.632 | 0.00 | 0.57 | 42.66 | 4.92 |
4285 | 4625 | 0.599558 | GTGCAGTCACATGTTGGCAT | 59.400 | 50.000 | 12.00 | 0.00 | 42.66 | 4.40 |
4394 | 4734 | 3.388676 | TCTTAAGGTCGACACCAAGGAAA | 59.611 | 43.478 | 18.91 | 0.00 | 46.68 | 3.13 |
4400 | 4740 | 2.940410 | GTCGACACCAAGGAAAACTTCA | 59.060 | 45.455 | 11.55 | 0.00 | 37.29 | 3.02 |
4429 | 4769 | 4.645136 | AGTTCCAACTTCTGGGAAAACTTC | 59.355 | 41.667 | 0.00 | 0.00 | 46.44 | 3.01 |
4468 | 4808 | 6.602179 | TCACATTAGATTTTCTGAAACTGCG | 58.398 | 36.000 | 1.58 | 0.00 | 0.00 | 5.18 |
4496 | 4836 | 1.754803 | CTAAGTCGAGGCACCATGGTA | 59.245 | 52.381 | 19.28 | 0.00 | 0.00 | 3.25 |
4537 | 4877 | 8.996651 | TTGATAATGGTGTCTCTATACTCTCA | 57.003 | 34.615 | 0.00 | 0.00 | 0.00 | 3.27 |
4806 | 5146 | 5.637810 | GTGAGTCGTGAATTTTCCTGTATCA | 59.362 | 40.000 | 0.00 | 0.00 | 0.00 | 2.15 |
4871 | 5211 | 2.875296 | TGATTGTATAAGCATGGCCCC | 58.125 | 47.619 | 0.00 | 0.00 | 0.00 | 5.80 |
5086 | 5432 | 7.174772 | TGAAATTCTGCTCAGTTTGCTATAACA | 59.825 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
5214 | 5561 | 2.774234 | AGATGAGGTACCACATGGGAAG | 59.226 | 50.000 | 26.98 | 0.00 | 41.15 | 3.46 |
5305 | 5652 | 2.092323 | TGCTACATACTGCTCTGTCGT | 58.908 | 47.619 | 0.00 | 0.00 | 0.00 | 4.34 |
5346 | 5693 | 1.984570 | TGCTACGGAAGAGGCTGCT | 60.985 | 57.895 | 0.00 | 0.00 | 34.51 | 4.24 |
5352 | 5699 | 1.078567 | GGAAGAGGCTGCTGACCAG | 60.079 | 63.158 | 0.00 | 0.00 | 44.67 | 4.00 |
5459 | 5806 | 9.920946 | TCCTTGCTGGAATAAATCTAAACTTAT | 57.079 | 29.630 | 0.00 | 0.00 | 42.94 | 1.73 |
5512 | 5859 | 9.170734 | TGTTCAATCAAATTGATTTTGTTTGGA | 57.829 | 25.926 | 17.65 | 8.21 | 44.03 | 3.53 |
5513 | 5860 | 9.437045 | GTTCAATCAAATTGATTTTGTTTGGAC | 57.563 | 29.630 | 17.65 | 15.61 | 44.03 | 4.02 |
5515 | 5862 | 7.992033 | TCAATCAAATTGATTTTGTTTGGACCT | 59.008 | 29.630 | 17.65 | 0.00 | 44.03 | 3.85 |
5579 | 5952 | 7.824779 | GTCAACCCTCTTTTAGTCATCTTGTAT | 59.175 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
5584 | 5957 | 7.121168 | CCCTCTTTTAGTCATCTTGTATGCAAA | 59.879 | 37.037 | 0.00 | 0.00 | 33.73 | 3.68 |
5585 | 5958 | 8.514594 | CCTCTTTTAGTCATCTTGTATGCAAAA | 58.485 | 33.333 | 0.00 | 0.00 | 33.73 | 2.44 |
5628 | 6001 | 5.765182 | ACAGCCATGGTGAGCTATTTATTAC | 59.235 | 40.000 | 14.67 | 0.00 | 37.18 | 1.89 |
5649 | 6022 | 4.646572 | ACCAAAGGAAGTCATCAAGAGTC | 58.353 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
5656 | 6029 | 1.821753 | AGTCATCAAGAGTCAGACCCG | 59.178 | 52.381 | 0.00 | 0.00 | 0.00 | 5.28 |
5660 | 6033 | 3.056536 | TCATCAAGAGTCAGACCCGAAAG | 60.057 | 47.826 | 0.00 | 0.00 | 0.00 | 2.62 |
5678 | 6051 | 6.701432 | CGAAAGGTTACAAATACGAAGACT | 57.299 | 37.500 | 0.00 | 0.00 | 0.00 | 3.24 |
5679 | 6052 | 7.113704 | CGAAAGGTTACAAATACGAAGACTT | 57.886 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5680 | 6053 | 8.231304 | CGAAAGGTTACAAATACGAAGACTTA | 57.769 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
5681 | 6054 | 8.866956 | CGAAAGGTTACAAATACGAAGACTTAT | 58.133 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
5682 | 6055 | 9.968743 | GAAAGGTTACAAATACGAAGACTTATG | 57.031 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
5683 | 6056 | 9.498176 | AAAGGTTACAAATACGAAGACTTATGT | 57.502 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
5753 | 6760 | 1.000955 | AGGCACAGTGAAGTCGGTTAG | 59.999 | 52.381 | 4.15 | 0.00 | 0.00 | 2.34 |
5794 | 6804 | 4.163458 | AGCCGATTCCTGTGACCTAAATTA | 59.837 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
5795 | 6805 | 4.272748 | GCCGATTCCTGTGACCTAAATTAC | 59.727 | 45.833 | 0.00 | 0.00 | 0.00 | 1.89 |
5796 | 6806 | 5.424757 | CCGATTCCTGTGACCTAAATTACA | 58.575 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
5797 | 6807 | 5.523916 | CCGATTCCTGTGACCTAAATTACAG | 59.476 | 44.000 | 0.00 | 0.00 | 40.06 | 2.74 |
5798 | 6808 | 6.106673 | CGATTCCTGTGACCTAAATTACAGT | 58.893 | 40.000 | 0.00 | 0.00 | 39.02 | 3.55 |
5799 | 6809 | 6.036083 | CGATTCCTGTGACCTAAATTACAGTG | 59.964 | 42.308 | 0.00 | 0.00 | 39.02 | 3.66 |
5800 | 6810 | 6.428083 | TTCCTGTGACCTAAATTACAGTGA | 57.572 | 37.500 | 0.00 | 0.00 | 39.02 | 3.41 |
5802 | 6812 | 6.464222 | TCCTGTGACCTAAATTACAGTGAAG | 58.536 | 40.000 | 0.00 | 0.00 | 39.02 | 3.02 |
5804 | 6814 | 6.710744 | CCTGTGACCTAAATTACAGTGAAGTT | 59.289 | 38.462 | 0.00 | 0.00 | 39.02 | 2.66 |
5805 | 6815 | 7.876068 | CCTGTGACCTAAATTACAGTGAAGTTA | 59.124 | 37.037 | 0.00 | 0.00 | 39.02 | 2.24 |
5806 | 6816 | 8.827177 | TGTGACCTAAATTACAGTGAAGTTAG | 57.173 | 34.615 | 0.00 | 6.38 | 36.95 | 2.34 |
5840 | 7247 | 6.426633 | GTCCATGGTTAACAATTTTTCCCAAG | 59.573 | 38.462 | 12.58 | 0.00 | 0.00 | 3.61 |
5887 | 7296 | 2.025321 | AGTTGTCCTTTCGGGCCATATT | 60.025 | 45.455 | 4.39 | 0.00 | 32.45 | 1.28 |
5888 | 7297 | 2.341846 | TGTCCTTTCGGGCCATATTC | 57.658 | 50.000 | 4.39 | 0.00 | 32.45 | 1.75 |
6144 | 7554 | 2.960384 | TGATGGCTTTGCTGATTATGGG | 59.040 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
6170 | 7580 | 3.795688 | TCCAGAATCAAGAGCAAAGGT | 57.204 | 42.857 | 0.00 | 0.00 | 0.00 | 3.50 |
6294 | 7704 | 9.964303 | TGTGATATGTGCAAACCATTTTATATC | 57.036 | 29.630 | 0.00 | 0.00 | 0.00 | 1.63 |
6347 | 7801 | 7.043192 | GCATTTAGATGTGTGGCATTAATTGTC | 60.043 | 37.037 | 0.00 | 0.00 | 38.06 | 3.18 |
6355 | 7809 | 6.488344 | TGTGTGGCATTAATTGTCTCTTTGTA | 59.512 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
6357 | 7811 | 6.714810 | TGTGGCATTAATTGTCTCTTTGTACT | 59.285 | 34.615 | 0.00 | 0.00 | 0.00 | 2.73 |
6461 | 7915 | 1.892474 | GCTGTGCCTCCCAACAATAAA | 59.108 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
6542 | 7996 | 3.015516 | GGTTTCAGAGAAACCGGCA | 57.984 | 52.632 | 21.66 | 0.00 | 40.10 | 5.69 |
6565 | 8019 | 3.713858 | TGGTAAGTCTGTCGAAAACGA | 57.286 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
6668 | 8122 | 1.767681 | AGGGCATCATGAAGAGGAGTC | 59.232 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
6676 | 8130 | 3.053320 | TCATGAAGAGGAGTCTAGGAGCA | 60.053 | 47.826 | 0.00 | 0.00 | 30.45 | 4.26 |
6681 | 8135 | 0.820871 | AGGAGTCTAGGAGCAAAGCG | 59.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.68 |
6704 | 8158 | 1.287425 | GTTATACCAGGTCGCAGTGC | 58.713 | 55.000 | 4.58 | 4.58 | 0.00 | 4.40 |
6729 | 8184 | 4.513406 | AATATTAACGGCCCCAAGAAGA | 57.487 | 40.909 | 0.00 | 0.00 | 0.00 | 2.87 |
6744 | 8199 | 2.826488 | AGAAGAGGGGCGCTATGATAT | 58.174 | 47.619 | 7.64 | 0.00 | 0.00 | 1.63 |
7054 | 8516 | 8.152898 | GCATTGCCACTATCCATATCATATCTA | 58.847 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
7057 | 8519 | 9.666191 | TTGCCACTATCCATATCATATCTATCT | 57.334 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
7058 | 8520 | 9.086758 | TGCCACTATCCATATCATATCTATCTG | 57.913 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
7059 | 8521 | 9.087871 | GCCACTATCCATATCATATCTATCTGT | 57.912 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
7207 | 8673 | 3.262420 | CTCGTATGGGTCAAACTCTTGG | 58.738 | 50.000 | 0.00 | 0.00 | 33.01 | 3.61 |
7275 | 8758 | 1.750018 | CCATCACGCCCTGCAATCA | 60.750 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
7383 | 8870 | 0.320771 | AAGCGTCACATCAGTCCACC | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
7402 | 8889 | 1.396301 | CCGAGAAAAGATCTGCACTGC | 59.604 | 52.381 | 0.00 | 0.00 | 38.96 | 4.40 |
7403 | 8890 | 2.071540 | CGAGAAAAGATCTGCACTGCA | 58.928 | 47.619 | 3.11 | 3.11 | 38.96 | 4.41 |
7408 | 8895 | 0.250597 | AAGATCTGCACTGCACTGCA | 60.251 | 50.000 | 18.27 | 18.27 | 45.06 | 4.41 |
7410 | 8897 | 0.954449 | GATCTGCACTGCACTGCACT | 60.954 | 55.000 | 15.89 | 7.47 | 42.36 | 4.40 |
7411 | 8898 | 1.235281 | ATCTGCACTGCACTGCACTG | 61.235 | 55.000 | 15.89 | 8.67 | 42.36 | 3.66 |
7412 | 8899 | 3.538028 | CTGCACTGCACTGCACTGC | 62.538 | 63.158 | 22.02 | 22.02 | 44.42 | 4.40 |
7413 | 8900 | 3.285215 | GCACTGCACTGCACTGCT | 61.285 | 61.111 | 21.70 | 0.00 | 42.21 | 4.24 |
7415 | 8902 | 1.890510 | CACTGCACTGCACTGCTCA | 60.891 | 57.895 | 17.53 | 0.00 | 38.07 | 4.26 |
7416 | 8903 | 1.072678 | ACTGCACTGCACTGCTCAT | 59.927 | 52.632 | 17.53 | 2.66 | 38.07 | 2.90 |
7417 | 8904 | 0.322648 | ACTGCACTGCACTGCTCATA | 59.677 | 50.000 | 17.53 | 0.00 | 38.07 | 2.15 |
7418 | 8905 | 0.725686 | CTGCACTGCACTGCTCATAC | 59.274 | 55.000 | 17.53 | 0.00 | 38.07 | 2.39 |
7419 | 8906 | 0.674581 | TGCACTGCACTGCTCATACC | 60.675 | 55.000 | 17.53 | 0.00 | 38.07 | 2.73 |
7547 | 9040 | 2.016318 | TCACATCATGACCCAAATCGC | 58.984 | 47.619 | 0.00 | 0.00 | 29.99 | 4.58 |
7549 | 9042 | 1.298602 | CATCATGACCCAAATCGCGA | 58.701 | 50.000 | 13.09 | 13.09 | 0.00 | 5.87 |
7599 | 9092 | 3.767230 | CCGTTGCAGACAGACGCG | 61.767 | 66.667 | 3.53 | 3.53 | 35.60 | 6.01 |
7650 | 9143 | 1.999071 | GCCGGTTATTGCAATGCCGA | 61.999 | 55.000 | 36.79 | 15.06 | 39.17 | 5.54 |
7739 | 9234 | 2.646930 | ACATGACATGTGCCGATGATT | 58.353 | 42.857 | 20.21 | 0.00 | 43.01 | 2.57 |
7807 | 9302 | 8.512138 | ACTGGTTTACTGCTACATGTTATTTTC | 58.488 | 33.333 | 2.30 | 0.00 | 0.00 | 2.29 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 3.528532 | GGTAGTAAAATACAGGCTGCGT | 58.471 | 45.455 | 15.89 | 0.00 | 0.00 | 5.24 |
1 | 2 | 2.870411 | GGGTAGTAAAATACAGGCTGCG | 59.130 | 50.000 | 15.89 | 0.00 | 0.00 | 5.18 |
2 | 3 | 3.211865 | GGGGTAGTAAAATACAGGCTGC | 58.788 | 50.000 | 15.89 | 0.00 | 0.00 | 5.25 |
3 | 4 | 4.497291 | TGGGGTAGTAAAATACAGGCTG | 57.503 | 45.455 | 14.16 | 14.16 | 0.00 | 4.85 |
4 | 5 | 5.523883 | TTTGGGGTAGTAAAATACAGGCT | 57.476 | 39.130 | 0.00 | 0.00 | 0.00 | 4.58 |
5 | 6 | 6.593268 | TTTTTGGGGTAGTAAAATACAGGC | 57.407 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
39 | 40 | 6.018016 | GTGTAACTCGTTAGGCTTGGTAAAAA | 60.018 | 38.462 | 0.00 | 0.00 | 0.00 | 1.94 |
40 | 41 | 5.466393 | GTGTAACTCGTTAGGCTTGGTAAAA | 59.534 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
41 | 42 | 4.990426 | GTGTAACTCGTTAGGCTTGGTAAA | 59.010 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
42 | 43 | 4.559153 | GTGTAACTCGTTAGGCTTGGTAA | 58.441 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
43 | 44 | 3.366273 | CGTGTAACTCGTTAGGCTTGGTA | 60.366 | 47.826 | 0.00 | 0.00 | 31.75 | 3.25 |
44 | 45 | 2.608752 | CGTGTAACTCGTTAGGCTTGGT | 60.609 | 50.000 | 0.00 | 0.00 | 31.75 | 3.67 |
45 | 46 | 1.990563 | CGTGTAACTCGTTAGGCTTGG | 59.009 | 52.381 | 0.00 | 0.00 | 31.75 | 3.61 |
46 | 47 | 2.915463 | CTCGTGTAACTCGTTAGGCTTG | 59.085 | 50.000 | 0.00 | 0.00 | 31.75 | 4.01 |
47 | 48 | 2.555757 | ACTCGTGTAACTCGTTAGGCTT | 59.444 | 45.455 | 0.00 | 0.00 | 31.75 | 4.35 |
48 | 49 | 2.157738 | ACTCGTGTAACTCGTTAGGCT | 58.842 | 47.619 | 0.00 | 0.00 | 31.75 | 4.58 |
49 | 50 | 2.626088 | ACTCGTGTAACTCGTTAGGC | 57.374 | 50.000 | 0.00 | 0.00 | 31.75 | 3.93 |
50 | 51 | 4.491602 | CGAGTACTCGTGTAACTCGTTAGG | 60.492 | 50.000 | 32.24 | 3.28 | 46.99 | 2.69 |
51 | 52 | 4.563335 | CGAGTACTCGTGTAACTCGTTAG | 58.437 | 47.826 | 32.24 | 3.91 | 46.99 | 2.34 |
52 | 53 | 4.568229 | CGAGTACTCGTGTAACTCGTTA | 57.432 | 45.455 | 32.24 | 0.00 | 46.99 | 3.18 |
53 | 54 | 3.446184 | CGAGTACTCGTGTAACTCGTT | 57.554 | 47.619 | 32.24 | 0.00 | 46.99 | 3.85 |
64 | 65 | 2.033236 | GAGCTGATCTCACGAGTACTCG | 60.033 | 54.545 | 36.93 | 36.93 | 44.15 | 4.18 |
65 | 66 | 2.033236 | CGAGCTGATCTCACGAGTACTC | 60.033 | 54.545 | 13.18 | 13.18 | 41.98 | 2.59 |
66 | 67 | 1.937223 | CGAGCTGATCTCACGAGTACT | 59.063 | 52.381 | 0.00 | 0.00 | 41.98 | 2.73 |
67 | 68 | 1.666700 | ACGAGCTGATCTCACGAGTAC | 59.333 | 52.381 | 0.00 | 0.00 | 41.98 | 2.73 |
68 | 69 | 2.025589 | ACGAGCTGATCTCACGAGTA | 57.974 | 50.000 | 0.00 | 0.00 | 41.98 | 2.59 |
69 | 70 | 1.169577 | AACGAGCTGATCTCACGAGT | 58.830 | 50.000 | 0.00 | 0.00 | 41.98 | 4.18 |
70 | 71 | 2.270275 | AAACGAGCTGATCTCACGAG | 57.730 | 50.000 | 0.00 | 0.00 | 41.98 | 4.18 |
71 | 72 | 3.190744 | AGTTAAACGAGCTGATCTCACGA | 59.809 | 43.478 | 0.00 | 0.00 | 41.98 | 4.35 |
72 | 73 | 3.502920 | AGTTAAACGAGCTGATCTCACG | 58.497 | 45.455 | 0.00 | 0.00 | 41.98 | 4.35 |
73 | 74 | 4.092091 | CCAAGTTAAACGAGCTGATCTCAC | 59.908 | 45.833 | 0.00 | 0.00 | 41.98 | 3.51 |
74 | 75 | 4.245660 | CCAAGTTAAACGAGCTGATCTCA | 58.754 | 43.478 | 0.00 | 0.00 | 41.98 | 3.27 |
75 | 76 | 4.246458 | ACCAAGTTAAACGAGCTGATCTC | 58.754 | 43.478 | 0.00 | 0.00 | 38.47 | 2.75 |
76 | 77 | 4.273148 | ACCAAGTTAAACGAGCTGATCT | 57.727 | 40.909 | 0.00 | 0.00 | 0.00 | 2.75 |
77 | 78 | 5.147162 | CAAACCAAGTTAAACGAGCTGATC | 58.853 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
78 | 79 | 4.578928 | ACAAACCAAGTTAAACGAGCTGAT | 59.421 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
79 | 80 | 3.942748 | ACAAACCAAGTTAAACGAGCTGA | 59.057 | 39.130 | 0.00 | 0.00 | 0.00 | 4.26 |
80 | 81 | 4.287238 | ACAAACCAAGTTAAACGAGCTG | 57.713 | 40.909 | 0.00 | 0.00 | 0.00 | 4.24 |
81 | 82 | 6.260377 | GTTTACAAACCAAGTTAAACGAGCT | 58.740 | 36.000 | 0.00 | 0.00 | 32.82 | 4.09 |
82 | 83 | 5.170092 | CGTTTACAAACCAAGTTAAACGAGC | 59.830 | 40.000 | 16.52 | 0.00 | 46.98 | 5.03 |
83 | 84 | 6.706239 | CGTTTACAAACCAAGTTAAACGAG | 57.294 | 37.500 | 16.52 | 0.00 | 46.98 | 4.18 |
85 | 86 | 7.127686 | AGATCGTTTACAAACCAAGTTAAACG | 58.872 | 34.615 | 15.73 | 15.73 | 46.05 | 3.60 |
86 | 87 | 8.845942 | AAGATCGTTTACAAACCAAGTTAAAC | 57.154 | 30.769 | 0.00 | 0.00 | 35.51 | 2.01 |
103 | 104 | 9.994432 | CAAGCTGAGATTTAATTTAAGATCGTT | 57.006 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
104 | 105 | 8.616076 | CCAAGCTGAGATTTAATTTAAGATCGT | 58.384 | 33.333 | 0.00 | 0.00 | 0.00 | 3.73 |
105 | 106 | 7.589221 | GCCAAGCTGAGATTTAATTTAAGATCG | 59.411 | 37.037 | 0.00 | 0.00 | 0.00 | 3.69 |
106 | 107 | 8.628280 | AGCCAAGCTGAGATTTAATTTAAGATC | 58.372 | 33.333 | 0.00 | 0.00 | 37.57 | 2.75 |
107 | 108 | 8.530804 | AGCCAAGCTGAGATTTAATTTAAGAT | 57.469 | 30.769 | 0.00 | 0.00 | 37.57 | 2.40 |
108 | 109 | 7.201644 | CGAGCCAAGCTGAGATTTAATTTAAGA | 60.202 | 37.037 | 0.00 | 0.00 | 39.88 | 2.10 |
109 | 110 | 6.909357 | CGAGCCAAGCTGAGATTTAATTTAAG | 59.091 | 38.462 | 0.00 | 0.00 | 39.88 | 1.85 |
110 | 111 | 6.374333 | ACGAGCCAAGCTGAGATTTAATTTAA | 59.626 | 34.615 | 0.00 | 0.00 | 39.88 | 1.52 |
111 | 112 | 5.880332 | ACGAGCCAAGCTGAGATTTAATTTA | 59.120 | 36.000 | 0.00 | 0.00 | 39.88 | 1.40 |
112 | 113 | 4.702131 | ACGAGCCAAGCTGAGATTTAATTT | 59.298 | 37.500 | 0.00 | 0.00 | 39.88 | 1.82 |
113 | 114 | 4.265073 | ACGAGCCAAGCTGAGATTTAATT | 58.735 | 39.130 | 0.00 | 0.00 | 39.88 | 1.40 |
114 | 115 | 3.878778 | ACGAGCCAAGCTGAGATTTAAT | 58.121 | 40.909 | 0.00 | 0.00 | 39.88 | 1.40 |
115 | 116 | 3.334583 | ACGAGCCAAGCTGAGATTTAA | 57.665 | 42.857 | 0.00 | 0.00 | 39.88 | 1.52 |
116 | 117 | 3.334583 | AACGAGCCAAGCTGAGATTTA | 57.665 | 42.857 | 0.00 | 0.00 | 39.88 | 1.40 |
117 | 118 | 2.191128 | AACGAGCCAAGCTGAGATTT | 57.809 | 45.000 | 0.00 | 0.00 | 39.88 | 2.17 |
118 | 119 | 3.550437 | ATAACGAGCCAAGCTGAGATT | 57.450 | 42.857 | 0.00 | 0.00 | 39.88 | 2.40 |
119 | 120 | 3.550437 | AATAACGAGCCAAGCTGAGAT | 57.450 | 42.857 | 0.00 | 0.00 | 39.88 | 2.75 |
120 | 121 | 3.334583 | AAATAACGAGCCAAGCTGAGA | 57.665 | 42.857 | 0.00 | 0.00 | 39.88 | 3.27 |
121 | 122 | 4.425577 | AAAAATAACGAGCCAAGCTGAG | 57.574 | 40.909 | 0.00 | 0.00 | 39.88 | 3.35 |
139 | 140 | 4.292599 | TCGAATCGACTCGAACTCAAAAA | 58.707 | 39.130 | 17.53 | 0.00 | 44.49 | 1.94 |
140 | 141 | 3.892522 | TCGAATCGACTCGAACTCAAAA | 58.107 | 40.909 | 17.53 | 0.00 | 44.49 | 2.44 |
141 | 142 | 3.489444 | CTCGAATCGACTCGAACTCAAA | 58.511 | 45.455 | 20.20 | 0.00 | 46.53 | 2.69 |
142 | 143 | 2.728225 | GCTCGAATCGACTCGAACTCAA | 60.728 | 50.000 | 20.20 | 0.00 | 46.53 | 3.02 |
143 | 144 | 1.202043 | GCTCGAATCGACTCGAACTCA | 60.202 | 52.381 | 20.20 | 0.00 | 46.53 | 3.41 |
144 | 145 | 1.458746 | GCTCGAATCGACTCGAACTC | 58.541 | 55.000 | 20.20 | 8.53 | 46.53 | 3.01 |
145 | 146 | 0.099082 | GGCTCGAATCGACTCGAACT | 59.901 | 55.000 | 20.20 | 0.00 | 46.53 | 3.01 |
146 | 147 | 1.194896 | CGGCTCGAATCGACTCGAAC | 61.195 | 60.000 | 20.20 | 15.50 | 46.53 | 3.95 |
147 | 148 | 1.062047 | CGGCTCGAATCGACTCGAA | 59.938 | 57.895 | 20.20 | 4.48 | 46.53 | 3.71 |
148 | 149 | 1.763200 | CTCGGCTCGAATCGACTCGA | 61.763 | 60.000 | 18.71 | 18.71 | 45.22 | 4.04 |
149 | 150 | 1.368255 | CTCGGCTCGAATCGACTCG | 60.368 | 63.158 | 10.51 | 10.51 | 40.25 | 4.18 |
150 | 151 | 0.316360 | GACTCGGCTCGAATCGACTC | 60.316 | 60.000 | 0.00 | 0.00 | 34.74 | 3.36 |
151 | 152 | 1.025113 | TGACTCGGCTCGAATCGACT | 61.025 | 55.000 | 0.00 | 0.00 | 34.78 | 4.18 |
152 | 153 | 0.862283 | GTGACTCGGCTCGAATCGAC | 60.862 | 60.000 | 0.00 | 0.00 | 34.78 | 4.20 |
153 | 154 | 1.428219 | GTGACTCGGCTCGAATCGA | 59.572 | 57.895 | 4.91 | 4.91 | 34.78 | 3.59 |
154 | 155 | 1.934956 | CGTGACTCGGCTCGAATCG | 60.935 | 63.158 | 0.00 | 0.00 | 34.78 | 3.34 |
155 | 156 | 0.590230 | CTCGTGACTCGGCTCGAATC | 60.590 | 60.000 | 0.00 | 0.08 | 40.32 | 2.52 |
156 | 157 | 1.429825 | CTCGTGACTCGGCTCGAAT | 59.570 | 57.895 | 0.00 | 0.00 | 40.32 | 3.34 |
157 | 158 | 2.868196 | CTCGTGACTCGGCTCGAA | 59.132 | 61.111 | 0.00 | 0.00 | 40.32 | 3.71 |
158 | 159 | 2.847435 | TAGCTCGTGACTCGGCTCGA | 62.847 | 60.000 | 13.56 | 0.00 | 42.01 | 4.04 |
159 | 160 | 2.461945 | TAGCTCGTGACTCGGCTCG | 61.462 | 63.158 | 13.56 | 0.00 | 42.01 | 5.03 |
160 | 161 | 1.062845 | GTAGCTCGTGACTCGGCTC | 59.937 | 63.158 | 13.56 | 5.64 | 42.01 | 4.70 |
161 | 162 | 1.370587 | GAGTAGCTCGTGACTCGGCT | 61.371 | 60.000 | 14.29 | 14.29 | 43.93 | 5.52 |
162 | 163 | 1.062845 | GAGTAGCTCGTGACTCGGC | 59.937 | 63.158 | 0.00 | 0.27 | 40.32 | 5.54 |
172 | 173 | 1.838943 | CGCGAACTAAACGAGTAGCTC | 59.161 | 52.381 | 0.00 | 0.00 | 37.44 | 4.09 |
173 | 174 | 1.466167 | TCGCGAACTAAACGAGTAGCT | 59.534 | 47.619 | 6.20 | 0.00 | 37.44 | 3.32 |
174 | 175 | 1.838943 | CTCGCGAACTAAACGAGTAGC | 59.161 | 52.381 | 11.33 | 0.00 | 46.19 | 3.58 |
179 | 180 | 1.334054 | GAAGCTCGCGAACTAAACGA | 58.666 | 50.000 | 13.17 | 0.00 | 0.00 | 3.85 |
180 | 181 | 0.022106 | CGAAGCTCGCGAACTAAACG | 59.978 | 55.000 | 13.17 | 14.37 | 31.14 | 3.60 |
181 | 182 | 1.317904 | CTCGAAGCTCGCGAACTAAAC | 59.682 | 52.381 | 13.17 | 6.81 | 40.21 | 2.01 |
182 | 183 | 1.614385 | CTCGAAGCTCGCGAACTAAA | 58.386 | 50.000 | 13.17 | 0.57 | 40.21 | 1.85 |
183 | 184 | 0.797249 | GCTCGAAGCTCGCGAACTAA | 60.797 | 55.000 | 13.17 | 0.93 | 40.21 | 2.24 |
184 | 185 | 1.226323 | GCTCGAAGCTCGCGAACTA | 60.226 | 57.895 | 13.17 | 0.00 | 40.21 | 2.24 |
185 | 186 | 2.505118 | GCTCGAAGCTCGCGAACT | 60.505 | 61.111 | 11.33 | 8.63 | 40.21 | 3.01 |
206 | 207 | 3.745799 | TGTCACGATTAGGGCTGAAAAA | 58.254 | 40.909 | 0.00 | 0.00 | 0.00 | 1.94 |
207 | 208 | 3.410631 | TGTCACGATTAGGGCTGAAAA | 57.589 | 42.857 | 0.00 | 0.00 | 0.00 | 2.29 |
208 | 209 | 3.410631 | TTGTCACGATTAGGGCTGAAA | 57.589 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
209 | 210 | 3.410631 | TTTGTCACGATTAGGGCTGAA | 57.589 | 42.857 | 0.00 | 0.00 | 0.00 | 3.02 |
210 | 211 | 3.334691 | CTTTTGTCACGATTAGGGCTGA | 58.665 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
211 | 212 | 2.159517 | GCTTTTGTCACGATTAGGGCTG | 60.160 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
212 | 213 | 2.084546 | GCTTTTGTCACGATTAGGGCT | 58.915 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
213 | 214 | 2.084546 | AGCTTTTGTCACGATTAGGGC | 58.915 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
214 | 215 | 4.250464 | TGTAGCTTTTGTCACGATTAGGG | 58.750 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
215 | 216 | 5.351465 | ACATGTAGCTTTTGTCACGATTAGG | 59.649 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
216 | 217 | 6.128553 | ACACATGTAGCTTTTGTCACGATTAG | 60.129 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
217 | 218 | 5.699001 | ACACATGTAGCTTTTGTCACGATTA | 59.301 | 36.000 | 0.00 | 0.00 | 0.00 | 1.75 |
218 | 219 | 4.515191 | ACACATGTAGCTTTTGTCACGATT | 59.485 | 37.500 | 0.00 | 0.00 | 0.00 | 3.34 |
219 | 220 | 4.065088 | ACACATGTAGCTTTTGTCACGAT | 58.935 | 39.130 | 0.00 | 0.00 | 0.00 | 3.73 |
220 | 221 | 3.462982 | ACACATGTAGCTTTTGTCACGA | 58.537 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
221 | 222 | 3.494626 | AGACACATGTAGCTTTTGTCACG | 59.505 | 43.478 | 0.00 | 0.00 | 39.26 | 4.35 |
222 | 223 | 4.376413 | CGAGACACATGTAGCTTTTGTCAC | 60.376 | 45.833 | 0.00 | 0.00 | 39.26 | 3.67 |
223 | 224 | 3.740832 | CGAGACACATGTAGCTTTTGTCA | 59.259 | 43.478 | 0.00 | 0.00 | 39.26 | 3.58 |
224 | 225 | 3.987868 | TCGAGACACATGTAGCTTTTGTC | 59.012 | 43.478 | 0.00 | 0.00 | 37.45 | 3.18 |
225 | 226 | 3.990092 | TCGAGACACATGTAGCTTTTGT | 58.010 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
226 | 227 | 3.181526 | GCTCGAGACACATGTAGCTTTTG | 60.182 | 47.826 | 18.75 | 0.00 | 0.00 | 2.44 |
227 | 228 | 2.996621 | GCTCGAGACACATGTAGCTTTT | 59.003 | 45.455 | 18.75 | 0.00 | 0.00 | 2.27 |
228 | 229 | 2.029020 | TGCTCGAGACACATGTAGCTTT | 60.029 | 45.455 | 18.75 | 0.00 | 29.76 | 3.51 |
229 | 230 | 1.546029 | TGCTCGAGACACATGTAGCTT | 59.454 | 47.619 | 18.75 | 0.00 | 29.76 | 3.74 |
230 | 231 | 1.177401 | TGCTCGAGACACATGTAGCT | 58.823 | 50.000 | 18.75 | 8.20 | 29.76 | 3.32 |
231 | 232 | 1.996292 | TTGCTCGAGACACATGTAGC | 58.004 | 50.000 | 18.75 | 8.75 | 0.00 | 3.58 |
232 | 233 | 4.672409 | TGTATTGCTCGAGACACATGTAG | 58.328 | 43.478 | 18.75 | 0.00 | 0.00 | 2.74 |
233 | 234 | 4.712122 | TGTATTGCTCGAGACACATGTA | 57.288 | 40.909 | 18.75 | 0.00 | 0.00 | 2.29 |
234 | 235 | 3.592898 | TGTATTGCTCGAGACACATGT | 57.407 | 42.857 | 18.75 | 0.00 | 0.00 | 3.21 |
235 | 236 | 3.928992 | ACTTGTATTGCTCGAGACACATG | 59.071 | 43.478 | 18.75 | 15.96 | 0.00 | 3.21 |
236 | 237 | 4.177026 | GACTTGTATTGCTCGAGACACAT | 58.823 | 43.478 | 18.75 | 11.65 | 0.00 | 3.21 |
237 | 238 | 3.575630 | GACTTGTATTGCTCGAGACACA | 58.424 | 45.455 | 18.75 | 10.45 | 0.00 | 3.72 |
238 | 239 | 2.594654 | CGACTTGTATTGCTCGAGACAC | 59.405 | 50.000 | 18.75 | 7.84 | 0.00 | 3.67 |
239 | 240 | 2.415491 | CCGACTTGTATTGCTCGAGACA | 60.415 | 50.000 | 18.75 | 11.13 | 0.00 | 3.41 |
240 | 241 | 2.186076 | CCGACTTGTATTGCTCGAGAC | 58.814 | 52.381 | 18.75 | 8.32 | 0.00 | 3.36 |
241 | 242 | 1.469251 | GCCGACTTGTATTGCTCGAGA | 60.469 | 52.381 | 18.75 | 0.00 | 0.00 | 4.04 |
242 | 243 | 0.924090 | GCCGACTTGTATTGCTCGAG | 59.076 | 55.000 | 8.45 | 8.45 | 0.00 | 4.04 |
243 | 244 | 0.459585 | GGCCGACTTGTATTGCTCGA | 60.460 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
244 | 245 | 1.429148 | GGGCCGACTTGTATTGCTCG | 61.429 | 60.000 | 0.00 | 0.00 | 0.00 | 5.03 |
245 | 246 | 0.392461 | TGGGCCGACTTGTATTGCTC | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
246 | 247 | 0.037590 | TTGGGCCGACTTGTATTGCT | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
247 | 248 | 0.885196 | TTTGGGCCGACTTGTATTGC | 59.115 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
248 | 249 | 1.135803 | CGTTTGGGCCGACTTGTATTG | 60.136 | 52.381 | 0.00 | 0.00 | 0.00 | 1.90 |
249 | 250 | 1.161843 | CGTTTGGGCCGACTTGTATT | 58.838 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
250 | 251 | 0.322322 | TCGTTTGGGCCGACTTGTAT | 59.678 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
251 | 252 | 0.320073 | CTCGTTTGGGCCGACTTGTA | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 2.41 |
252 | 253 | 1.597027 | CTCGTTTGGGCCGACTTGT | 60.597 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
253 | 254 | 2.966309 | GCTCGTTTGGGCCGACTTG | 61.966 | 63.158 | 0.00 | 0.00 | 0.00 | 3.16 |
254 | 255 | 1.823169 | TAGCTCGTTTGGGCCGACTT | 61.823 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
255 | 256 | 2.280552 | TAGCTCGTTTGGGCCGACT | 61.281 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
256 | 257 | 2.098831 | GTAGCTCGTTTGGGCCGAC | 61.099 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
257 | 258 | 2.263540 | GTAGCTCGTTTGGGCCGA | 59.736 | 61.111 | 0.00 | 0.00 | 0.00 | 5.54 |
258 | 259 | 2.047655 | TGTAGCTCGTTTGGGCCG | 60.048 | 61.111 | 0.00 | 0.00 | 0.00 | 6.13 |
259 | 260 | 1.302192 | TGTGTAGCTCGTTTGGGCC | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 5.80 |
260 | 261 | 0.882927 | TGTGTGTAGCTCGTTTGGGC | 60.883 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
261 | 262 | 1.148310 | CTGTGTGTAGCTCGTTTGGG | 58.852 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
262 | 263 | 0.512952 | GCTGTGTGTAGCTCGTTTGG | 59.487 | 55.000 | 0.00 | 0.00 | 40.52 | 3.28 |
263 | 264 | 0.512952 | GGCTGTGTGTAGCTCGTTTG | 59.487 | 55.000 | 0.00 | 0.00 | 43.22 | 2.93 |
264 | 265 | 0.393077 | AGGCTGTGTGTAGCTCGTTT | 59.607 | 50.000 | 0.00 | 0.00 | 43.22 | 3.60 |
265 | 266 | 1.202582 | CTAGGCTGTGTGTAGCTCGTT | 59.797 | 52.381 | 0.00 | 0.00 | 43.22 | 3.85 |
266 | 267 | 0.811915 | CTAGGCTGTGTGTAGCTCGT | 59.188 | 55.000 | 0.00 | 0.00 | 43.22 | 4.18 |
267 | 268 | 0.526524 | GCTAGGCTGTGTGTAGCTCG | 60.527 | 60.000 | 0.00 | 0.00 | 43.22 | 5.03 |
268 | 269 | 0.179097 | GGCTAGGCTGTGTGTAGCTC | 60.179 | 60.000 | 9.46 | 0.00 | 43.22 | 4.09 |
269 | 270 | 1.617947 | GGGCTAGGCTGTGTGTAGCT | 61.618 | 60.000 | 16.80 | 0.00 | 43.22 | 3.32 |
270 | 271 | 1.153349 | GGGCTAGGCTGTGTGTAGC | 60.153 | 63.158 | 16.80 | 0.00 | 42.94 | 3.58 |
271 | 272 | 0.176680 | CTGGGCTAGGCTGTGTGTAG | 59.823 | 60.000 | 16.80 | 0.52 | 0.00 | 2.74 |
272 | 273 | 1.899437 | GCTGGGCTAGGCTGTGTGTA | 61.899 | 60.000 | 16.80 | 0.00 | 0.00 | 2.90 |
273 | 274 | 3.072476 | CTGGGCTAGGCTGTGTGT | 58.928 | 61.111 | 16.80 | 0.00 | 0.00 | 3.72 |
274 | 275 | 2.437359 | GCTGGGCTAGGCTGTGTG | 60.437 | 66.667 | 16.80 | 3.59 | 0.00 | 3.82 |
275 | 276 | 2.067932 | TTTGCTGGGCTAGGCTGTGT | 62.068 | 55.000 | 16.80 | 0.00 | 0.00 | 3.72 |
276 | 277 | 1.303561 | TTTGCTGGGCTAGGCTGTG | 60.304 | 57.895 | 16.80 | 7.69 | 0.00 | 3.66 |
277 | 278 | 1.001641 | CTTTGCTGGGCTAGGCTGT | 60.002 | 57.895 | 16.80 | 0.00 | 0.00 | 4.40 |
278 | 279 | 0.322816 | TTCTTTGCTGGGCTAGGCTG | 60.323 | 55.000 | 16.80 | 10.49 | 0.00 | 4.85 |
279 | 280 | 0.405585 | TTTCTTTGCTGGGCTAGGCT | 59.594 | 50.000 | 16.80 | 0.00 | 0.00 | 4.58 |
280 | 281 | 1.478631 | ATTTCTTTGCTGGGCTAGGC | 58.521 | 50.000 | 8.00 | 8.00 | 0.00 | 3.93 |
281 | 282 | 2.952310 | GGTATTTCTTTGCTGGGCTAGG | 59.048 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
282 | 283 | 3.891049 | AGGTATTTCTTTGCTGGGCTAG | 58.109 | 45.455 | 0.00 | 0.00 | 0.00 | 3.42 |
283 | 284 | 4.016444 | CAAGGTATTTCTTTGCTGGGCTA | 58.984 | 43.478 | 0.00 | 0.00 | 0.00 | 3.93 |
284 | 285 | 2.827921 | CAAGGTATTTCTTTGCTGGGCT | 59.172 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
285 | 286 | 3.236632 | CAAGGTATTTCTTTGCTGGGC | 57.763 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
291 | 292 | 2.749621 | AGAGCGGCAAGGTATTTCTTTG | 59.250 | 45.455 | 1.45 | 0.00 | 36.42 | 2.77 |
292 | 293 | 3.073274 | AGAGCGGCAAGGTATTTCTTT | 57.927 | 42.857 | 1.45 | 0.00 | 0.00 | 2.52 |
293 | 294 | 2.789409 | AGAGCGGCAAGGTATTTCTT | 57.211 | 45.000 | 1.45 | 0.00 | 0.00 | 2.52 |
294 | 295 | 2.789409 | AAGAGCGGCAAGGTATTTCT | 57.211 | 45.000 | 1.45 | 0.00 | 0.00 | 2.52 |
295 | 296 | 5.163652 | ACAAATAAGAGCGGCAAGGTATTTC | 60.164 | 40.000 | 1.45 | 0.00 | 33.48 | 2.17 |
296 | 297 | 4.705023 | ACAAATAAGAGCGGCAAGGTATTT | 59.295 | 37.500 | 1.45 | 4.22 | 33.48 | 1.40 |
297 | 298 | 4.270008 | ACAAATAAGAGCGGCAAGGTATT | 58.730 | 39.130 | 1.45 | 0.00 | 35.76 | 1.89 |
298 | 299 | 3.886123 | ACAAATAAGAGCGGCAAGGTAT | 58.114 | 40.909 | 1.45 | 0.00 | 0.00 | 2.73 |
299 | 300 | 3.343941 | ACAAATAAGAGCGGCAAGGTA | 57.656 | 42.857 | 1.45 | 0.00 | 0.00 | 3.08 |
300 | 301 | 2.200373 | ACAAATAAGAGCGGCAAGGT | 57.800 | 45.000 | 1.45 | 0.00 | 0.00 | 3.50 |
301 | 302 | 3.575965 | AAACAAATAAGAGCGGCAAGG | 57.424 | 42.857 | 1.45 | 0.00 | 0.00 | 3.61 |
302 | 303 | 3.603770 | CGAAAACAAATAAGAGCGGCAAG | 59.396 | 43.478 | 1.45 | 0.00 | 0.00 | 4.01 |
303 | 304 | 3.251245 | TCGAAAACAAATAAGAGCGGCAA | 59.749 | 39.130 | 1.45 | 0.00 | 0.00 | 4.52 |
304 | 305 | 2.809119 | TCGAAAACAAATAAGAGCGGCA | 59.191 | 40.909 | 1.45 | 0.00 | 0.00 | 5.69 |
305 | 306 | 3.465122 | TCGAAAACAAATAAGAGCGGC | 57.535 | 42.857 | 0.00 | 0.00 | 0.00 | 6.53 |
306 | 307 | 6.741448 | TTTTTCGAAAACAAATAAGAGCGG | 57.259 | 33.333 | 22.41 | 0.00 | 0.00 | 5.52 |
307 | 308 | 7.151256 | CGATTTTTCGAAAACAAATAAGAGCG | 58.849 | 34.615 | 22.41 | 15.31 | 34.64 | 5.03 |
308 | 309 | 6.942767 | GCGATTTTTCGAAAACAAATAAGAGC | 59.057 | 34.615 | 22.41 | 12.07 | 34.64 | 4.09 |
309 | 310 | 7.991736 | TGCGATTTTTCGAAAACAAATAAGAG | 58.008 | 30.769 | 22.41 | 6.80 | 34.64 | 2.85 |
310 | 311 | 7.916128 | TGCGATTTTTCGAAAACAAATAAGA | 57.084 | 28.000 | 22.41 | 6.35 | 34.64 | 2.10 |
311 | 312 | 8.476142 | TCTTGCGATTTTTCGAAAACAAATAAG | 58.524 | 29.630 | 22.41 | 20.63 | 34.64 | 1.73 |
312 | 313 | 8.263269 | GTCTTGCGATTTTTCGAAAACAAATAA | 58.737 | 29.630 | 22.41 | 13.67 | 34.64 | 1.40 |
313 | 314 | 7.356881 | CGTCTTGCGATTTTTCGAAAACAAATA | 60.357 | 33.333 | 22.41 | 8.54 | 44.77 | 1.40 |
314 | 315 | 6.559521 | CGTCTTGCGATTTTTCGAAAACAAAT | 60.560 | 34.615 | 22.41 | 13.69 | 44.77 | 2.32 |
315 | 316 | 5.275510 | CGTCTTGCGATTTTTCGAAAACAAA | 60.276 | 36.000 | 22.41 | 9.29 | 44.77 | 2.83 |
316 | 317 | 4.203361 | CGTCTTGCGATTTTTCGAAAACAA | 59.797 | 37.500 | 22.41 | 19.75 | 44.77 | 2.83 |
317 | 318 | 3.721798 | CGTCTTGCGATTTTTCGAAAACA | 59.278 | 39.130 | 22.41 | 14.17 | 44.77 | 2.83 |
318 | 319 | 3.722289 | ACGTCTTGCGATTTTTCGAAAAC | 59.278 | 39.130 | 22.41 | 11.78 | 44.77 | 2.43 |
319 | 320 | 3.942739 | ACGTCTTGCGATTTTTCGAAAA | 58.057 | 36.364 | 19.08 | 19.08 | 44.77 | 2.29 |
320 | 321 | 3.595709 | ACGTCTTGCGATTTTTCGAAA | 57.404 | 38.095 | 6.47 | 6.47 | 44.77 | 3.46 |
321 | 322 | 4.025896 | TGTTACGTCTTGCGATTTTTCGAA | 60.026 | 37.500 | 0.00 | 0.00 | 44.77 | 3.71 |
322 | 323 | 3.490155 | TGTTACGTCTTGCGATTTTTCGA | 59.510 | 39.130 | 0.00 | 0.00 | 44.77 | 3.71 |
323 | 324 | 3.790058 | TGTTACGTCTTGCGATTTTTCG | 58.210 | 40.909 | 0.00 | 0.00 | 44.77 | 3.46 |
324 | 325 | 9.646336 | ATTATATGTTACGTCTTGCGATTTTTC | 57.354 | 29.630 | 0.00 | 0.00 | 44.77 | 2.29 |
328 | 329 | 8.706035 | GGTTATTATATGTTACGTCTTGCGATT | 58.294 | 33.333 | 0.00 | 0.00 | 44.77 | 3.34 |
329 | 330 | 7.868922 | TGGTTATTATATGTTACGTCTTGCGAT | 59.131 | 33.333 | 0.00 | 0.00 | 44.77 | 4.58 |
330 | 331 | 7.201835 | TGGTTATTATATGTTACGTCTTGCGA | 58.798 | 34.615 | 0.00 | 0.00 | 44.77 | 5.10 |
332 | 333 | 7.095355 | CCCTGGTTATTATATGTTACGTCTTGC | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 4.01 |
333 | 334 | 8.145767 | TCCCTGGTTATTATATGTTACGTCTTG | 58.854 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
334 | 335 | 8.253867 | TCCCTGGTTATTATATGTTACGTCTT | 57.746 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
335 | 336 | 7.844493 | TCCCTGGTTATTATATGTTACGTCT | 57.156 | 36.000 | 0.00 | 0.00 | 0.00 | 4.18 |
336 | 337 | 8.768019 | GTTTCCCTGGTTATTATATGTTACGTC | 58.232 | 37.037 | 0.00 | 0.00 | 0.00 | 4.34 |
337 | 338 | 7.439056 | CGTTTCCCTGGTTATTATATGTTACGT | 59.561 | 37.037 | 0.00 | 0.00 | 0.00 | 3.57 |
338 | 339 | 7.439056 | ACGTTTCCCTGGTTATTATATGTTACG | 59.561 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
339 | 340 | 8.553696 | CACGTTTCCCTGGTTATTATATGTTAC | 58.446 | 37.037 | 0.00 | 0.00 | 0.00 | 2.50 |
340 | 341 | 8.484575 | TCACGTTTCCCTGGTTATTATATGTTA | 58.515 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
341 | 342 | 7.340256 | TCACGTTTCCCTGGTTATTATATGTT | 58.660 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
342 | 343 | 6.891388 | TCACGTTTCCCTGGTTATTATATGT | 58.109 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
343 | 344 | 7.979444 | ATCACGTTTCCCTGGTTATTATATG | 57.021 | 36.000 | 0.00 | 0.00 | 0.00 | 1.78 |
344 | 345 | 7.386848 | CGAATCACGTTTCCCTGGTTATTATAT | 59.613 | 37.037 | 0.00 | 0.00 | 37.22 | 0.86 |
345 | 346 | 6.702723 | CGAATCACGTTTCCCTGGTTATTATA | 59.297 | 38.462 | 0.00 | 0.00 | 37.22 | 0.98 |
346 | 347 | 5.526111 | CGAATCACGTTTCCCTGGTTATTAT | 59.474 | 40.000 | 0.00 | 0.00 | 37.22 | 1.28 |
347 | 348 | 4.871557 | CGAATCACGTTTCCCTGGTTATTA | 59.128 | 41.667 | 0.00 | 0.00 | 37.22 | 0.98 |
348 | 349 | 3.687698 | CGAATCACGTTTCCCTGGTTATT | 59.312 | 43.478 | 0.00 | 0.00 | 37.22 | 1.40 |
349 | 350 | 3.267483 | CGAATCACGTTTCCCTGGTTAT | 58.733 | 45.455 | 0.00 | 0.00 | 37.22 | 1.89 |
350 | 351 | 2.690786 | CGAATCACGTTTCCCTGGTTA | 58.309 | 47.619 | 0.00 | 0.00 | 37.22 | 2.85 |
351 | 352 | 1.519408 | CGAATCACGTTTCCCTGGTT | 58.481 | 50.000 | 0.00 | 0.00 | 37.22 | 3.67 |
352 | 353 | 0.953960 | GCGAATCACGTTTCCCTGGT | 60.954 | 55.000 | 0.00 | 0.00 | 44.60 | 4.00 |
353 | 354 | 0.673644 | AGCGAATCACGTTTCCCTGG | 60.674 | 55.000 | 0.00 | 0.00 | 44.60 | 4.45 |
354 | 355 | 0.443869 | CAGCGAATCACGTTTCCCTG | 59.556 | 55.000 | 1.40 | 1.40 | 44.60 | 4.45 |
355 | 356 | 1.298859 | GCAGCGAATCACGTTTCCCT | 61.299 | 55.000 | 0.00 | 0.00 | 44.60 | 4.20 |
356 | 357 | 1.134694 | GCAGCGAATCACGTTTCCC | 59.865 | 57.895 | 0.00 | 0.00 | 44.60 | 3.97 |
357 | 358 | 0.447801 | ATGCAGCGAATCACGTTTCC | 59.552 | 50.000 | 0.00 | 0.00 | 44.60 | 3.13 |
358 | 359 | 2.694043 | GTATGCAGCGAATCACGTTTC | 58.306 | 47.619 | 0.00 | 0.00 | 44.60 | 2.78 |
458 | 459 | 3.638484 | GGGTGGACGAATGTTTTTCTTG | 58.362 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
554 | 556 | 6.037172 | CGTAGGTTTGGGTAAATGAATGAGAG | 59.963 | 42.308 | 0.00 | 0.00 | 0.00 | 3.20 |
594 | 596 | 6.831353 | CAGATTCCGATGTAGGAGGAGTATAT | 59.169 | 42.308 | 0.00 | 0.00 | 41.98 | 0.86 |
597 | 599 | 4.399219 | CAGATTCCGATGTAGGAGGAGTA | 58.601 | 47.826 | 0.00 | 0.00 | 41.98 | 2.59 |
598 | 600 | 3.226777 | CAGATTCCGATGTAGGAGGAGT | 58.773 | 50.000 | 0.00 | 0.00 | 41.98 | 3.85 |
599 | 601 | 2.560542 | CCAGATTCCGATGTAGGAGGAG | 59.439 | 54.545 | 0.00 | 0.00 | 41.98 | 3.69 |
600 | 602 | 2.177016 | TCCAGATTCCGATGTAGGAGGA | 59.823 | 50.000 | 0.00 | 0.00 | 41.98 | 3.71 |
601 | 603 | 2.598565 | TCCAGATTCCGATGTAGGAGG | 58.401 | 52.381 | 0.00 | 0.00 | 41.98 | 4.30 |
602 | 604 | 3.056250 | CCATCCAGATTCCGATGTAGGAG | 60.056 | 52.174 | 9.36 | 0.00 | 41.98 | 3.69 |
603 | 605 | 2.899900 | CCATCCAGATTCCGATGTAGGA | 59.100 | 50.000 | 9.36 | 0.00 | 38.79 | 2.94 |
604 | 606 | 2.899900 | TCCATCCAGATTCCGATGTAGG | 59.100 | 50.000 | 9.36 | 0.00 | 35.17 | 3.18 |
605 | 607 | 3.056250 | CCTCCATCCAGATTCCGATGTAG | 60.056 | 52.174 | 9.36 | 4.62 | 35.17 | 2.74 |
606 | 608 | 2.899900 | CCTCCATCCAGATTCCGATGTA | 59.100 | 50.000 | 9.36 | 0.00 | 35.17 | 2.29 |
622 | 624 | 6.270463 | TGAGTAATGTTAACTGGTAACCTCCA | 59.730 | 38.462 | 12.73 | 0.00 | 41.35 | 3.86 |
648 | 651 | 4.293648 | CGAGGGTGTGTGCACGGA | 62.294 | 66.667 | 13.13 | 0.00 | 46.13 | 4.69 |
1096 | 1161 | 3.873883 | GATCCGTCGCCGTCGTCT | 61.874 | 66.667 | 2.78 | 0.00 | 36.96 | 4.18 |
1366 | 1431 | 2.045131 | ACTACACGGAGAGGGCGAC | 61.045 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
1394 | 1459 | 2.023461 | CGACCGAGCGCACTAGAG | 59.977 | 66.667 | 11.47 | 0.00 | 0.00 | 2.43 |
1395 | 1460 | 2.249557 | GAACGACCGAGCGCACTAGA | 62.250 | 60.000 | 11.47 | 0.00 | 33.86 | 2.43 |
1532 | 1597 | 4.309933 | AGCAGCCAAATTCAAAAACTAGC | 58.690 | 39.130 | 0.00 | 0.00 | 0.00 | 3.42 |
1582 | 1647 | 4.077188 | GCTCGGCACTTGTGCGTC | 62.077 | 66.667 | 17.87 | 5.91 | 35.24 | 5.19 |
1764 | 1829 | 6.539173 | TCCCACTCAAAATAAAGCAAGTCTA | 58.461 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1775 | 1840 | 5.710099 | CCAAAGTAGCTTCCCACTCAAAATA | 59.290 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
1797 | 1862 | 8.163408 | CCATATTCATTCCAAATAGTACCTCCA | 58.837 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
1887 | 1952 | 2.618053 | CCCGCCAGAACTAACTAGTTG | 58.382 | 52.381 | 18.56 | 10.41 | 45.84 | 3.16 |
1890 | 1955 | 1.192428 | ACCCCGCCAGAACTAACTAG | 58.808 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1891 | 1956 | 1.648116 | AACCCCGCCAGAACTAACTA | 58.352 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1905 | 1970 | 0.696501 | TTGAGCAGTTCCCTAACCCC | 59.303 | 55.000 | 0.00 | 0.00 | 36.15 | 4.95 |
1913 | 1978 | 1.452108 | CCCGGGATTGAGCAGTTCC | 60.452 | 63.158 | 18.48 | 0.00 | 0.00 | 3.62 |
1944 | 2009 | 9.865321 | AATAAGTGACAGATTTTCCATCATTTG | 57.135 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
1947 | 2012 | 8.812513 | TGAATAAGTGACAGATTTTCCATCAT | 57.187 | 30.769 | 0.00 | 0.00 | 0.00 | 2.45 |
1948 | 2013 | 8.634335 | TTGAATAAGTGACAGATTTTCCATCA | 57.366 | 30.769 | 0.00 | 0.00 | 0.00 | 3.07 |
1951 | 2016 | 9.076781 | TGAATTGAATAAGTGACAGATTTTCCA | 57.923 | 29.630 | 0.00 | 0.00 | 0.00 | 3.53 |
2029 | 2094 | 8.840321 | GCAGCATTCTAGTATTTCTAAAATGGA | 58.160 | 33.333 | 0.00 | 0.00 | 37.48 | 3.41 |
2109 | 2264 | 3.517500 | AGTCCAGGAAAGAAGAGATGACC | 59.482 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
2277 | 2435 | 4.634184 | TGACTCGCTGTAAGGAACTATC | 57.366 | 45.455 | 0.00 | 0.00 | 38.49 | 2.08 |
2508 | 2668 | 2.619074 | CCCTCCCTCACCTCATCAAAAC | 60.619 | 54.545 | 0.00 | 0.00 | 0.00 | 2.43 |
2586 | 2746 | 2.480037 | GTGGCCTTTTTGCAACAATAGC | 59.520 | 45.455 | 3.32 | 5.30 | 35.16 | 2.97 |
2591 | 2751 | 1.277557 | AGTTGTGGCCTTTTTGCAACA | 59.722 | 42.857 | 3.32 | 0.00 | 43.34 | 3.33 |
2661 | 2821 | 4.573607 | CAGTTGGTGATGATGGTGTATCTG | 59.426 | 45.833 | 0.00 | 0.00 | 36.71 | 2.90 |
2665 | 2825 | 3.582647 | ACTCAGTTGGTGATGATGGTGTA | 59.417 | 43.478 | 0.00 | 0.00 | 33.51 | 2.90 |
2674 | 2834 | 7.181125 | ACTCCTATAAAAGACTCAGTTGGTGAT | 59.819 | 37.037 | 0.00 | 0.00 | 33.51 | 3.06 |
2707 | 2867 | 8.425491 | CAACTAACTATACATATTAGCACGCAC | 58.575 | 37.037 | 0.00 | 0.00 | 30.45 | 5.34 |
2708 | 2868 | 8.354426 | TCAACTAACTATACATATTAGCACGCA | 58.646 | 33.333 | 0.00 | 0.00 | 30.45 | 5.24 |
2884 | 3210 | 2.693069 | CTCACAAGACCCACATCAGTC | 58.307 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
3065 | 3391 | 5.046448 | AGCCAATCAGAGCTATAATCTCCAG | 60.046 | 44.000 | 0.00 | 0.00 | 37.64 | 3.86 |
3106 | 3432 | 5.126067 | TCAAACTGCACTCTTTTCTTAGCT | 58.874 | 37.500 | 0.00 | 0.00 | 0.00 | 3.32 |
3343 | 3669 | 3.734293 | GCTTCAGGAAATGCTGAATCTGC | 60.734 | 47.826 | 16.21 | 12.89 | 38.66 | 4.26 |
3408 | 3734 | 3.696051 | GCCAAGCTCCAGTAAAATCATGA | 59.304 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
3508 | 3834 | 0.179936 | GGTGATGCTTGGAGAGGAGG | 59.820 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3618 | 3944 | 4.168922 | CACATCAGTGTTCAATGTGCAT | 57.831 | 40.909 | 9.08 | 0.00 | 42.51 | 3.96 |
3677 | 4004 | 5.724854 | ACCTAAGAGTTCAAGGCTATAACCA | 59.275 | 40.000 | 7.94 | 0.00 | 33.42 | 3.67 |
3749 | 4080 | 4.866508 | CATGAGATGCCAAGCCATTAAT | 57.133 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
3785 | 4116 | 3.516578 | GACAGGAGAACCCTTGTCG | 57.483 | 57.895 | 0.00 | 0.00 | 44.85 | 4.35 |
3884 | 4215 | 6.928348 | TCATTAATATGTACTCCACCGGAT | 57.072 | 37.500 | 9.46 | 0.00 | 33.34 | 4.18 |
3956 | 4287 | 1.754226 | TGGCAGAAAACTGTTGTTCCC | 59.246 | 47.619 | 0.00 | 0.27 | 34.96 | 3.97 |
3983 | 4314 | 5.075858 | TCACAAATTCTGGCAATTCCATC | 57.924 | 39.130 | 0.00 | 0.00 | 45.50 | 3.51 |
4003 | 4334 | 6.179756 | TCAAAAACTAGGCTGAGCATAATCA | 58.820 | 36.000 | 6.82 | 0.00 | 0.00 | 2.57 |
4004 | 4335 | 6.238593 | CCTCAAAAACTAGGCTGAGCATAATC | 60.239 | 42.308 | 6.82 | 0.00 | 35.09 | 1.75 |
4242 | 4575 | 7.279090 | CACAATTTTCATGCCATATCAACATGT | 59.721 | 33.333 | 0.00 | 0.00 | 41.51 | 3.21 |
4249 | 4582 | 5.353938 | ACTGCACAATTTTCATGCCATATC | 58.646 | 37.500 | 0.00 | 0.00 | 38.63 | 1.63 |
4281 | 4621 | 4.186159 | AGAAATAAAGCATGCAACATGCC | 58.814 | 39.130 | 24.69 | 10.72 | 44.23 | 4.40 |
4282 | 4622 | 7.473027 | AATAGAAATAAAGCATGCAACATGC | 57.527 | 32.000 | 21.98 | 21.83 | 45.29 | 4.06 |
4375 | 4715 | 3.135167 | AGTTTTCCTTGGTGTCGACCTTA | 59.865 | 43.478 | 14.12 | 0.00 | 43.58 | 2.69 |
4394 | 4734 | 5.893824 | AGAAGTTGGAACTGGAAATGAAGTT | 59.106 | 36.000 | 0.00 | 0.00 | 39.66 | 2.66 |
4468 | 4808 | 1.204941 | TGCCTCGACTTAGAAGCTTCC | 59.795 | 52.381 | 22.81 | 6.22 | 0.00 | 3.46 |
4496 | 4836 | 8.109634 | ACCATTATCAAACAATCTGGAAGTAGT | 58.890 | 33.333 | 0.00 | 0.00 | 33.76 | 2.73 |
4537 | 4877 | 0.815734 | CTTCATCACGAGTACCCGGT | 59.184 | 55.000 | 0.75 | 0.00 | 0.00 | 5.28 |
4580 | 4920 | 7.355778 | GTGTGTAAAGAAGAAATCTCACCTTG | 58.644 | 38.462 | 0.00 | 0.00 | 37.42 | 3.61 |
4729 | 5069 | 1.310933 | GGAGCACTCATTGGCTGGTG | 61.311 | 60.000 | 0.00 | 0.00 | 41.22 | 4.17 |
4806 | 5146 | 7.573710 | TCTGGTGTATCTAAATTACTGCCATT | 58.426 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
4871 | 5211 | 4.442706 | AGGGACTGTAGATAATGTTTGCG | 58.557 | 43.478 | 0.00 | 0.00 | 37.18 | 4.85 |
5305 | 5652 | 7.661437 | AGCACTGAGACAGTTCAATATTGTTAA | 59.339 | 33.333 | 14.97 | 0.55 | 42.59 | 2.01 |
5346 | 5693 | 5.026121 | ACAGATTTATCTCCACTCTGGTCA | 58.974 | 41.667 | 0.00 | 0.00 | 39.03 | 4.02 |
5352 | 5699 | 3.471680 | GGGCACAGATTTATCTCCACTC | 58.528 | 50.000 | 0.00 | 0.00 | 34.22 | 3.51 |
5512 | 5859 | 4.899352 | ATCACTCTAAAGCAAGTCAGGT | 57.101 | 40.909 | 0.00 | 0.00 | 0.00 | 4.00 |
5513 | 5860 | 6.166279 | TGTTATCACTCTAAAGCAAGTCAGG | 58.834 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5515 | 5862 | 7.615403 | AGATGTTATCACTCTAAAGCAAGTCA | 58.385 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
5595 | 5968 | 3.291584 | TCACCATGGCTGTTTTGTTACA | 58.708 | 40.909 | 13.04 | 0.00 | 0.00 | 2.41 |
5601 | 5974 | 2.584835 | TAGCTCACCATGGCTGTTTT | 57.415 | 45.000 | 13.04 | 0.00 | 39.31 | 2.43 |
5602 | 5975 | 2.814805 | ATAGCTCACCATGGCTGTTT | 57.185 | 45.000 | 13.04 | 0.00 | 39.31 | 2.83 |
5603 | 5976 | 2.814805 | AATAGCTCACCATGGCTGTT | 57.185 | 45.000 | 13.04 | 4.72 | 39.31 | 3.16 |
5604 | 5977 | 2.814805 | AAATAGCTCACCATGGCTGT | 57.185 | 45.000 | 13.04 | 0.00 | 39.31 | 4.40 |
5605 | 5978 | 5.182001 | GGTAATAAATAGCTCACCATGGCTG | 59.818 | 44.000 | 13.04 | 9.79 | 39.31 | 4.85 |
5606 | 5979 | 5.163099 | TGGTAATAAATAGCTCACCATGGCT | 60.163 | 40.000 | 13.04 | 5.45 | 41.92 | 4.75 |
5628 | 6001 | 4.645535 | TGACTCTTGATGACTTCCTTTGG | 58.354 | 43.478 | 0.00 | 0.00 | 0.00 | 3.28 |
5656 | 6029 | 9.968743 | CATAAGTCTTCGTATTTGTAACCTTTC | 57.031 | 33.333 | 0.00 | 0.00 | 0.00 | 2.62 |
5660 | 6033 | 9.578439 | ACTACATAAGTCTTCGTATTTGTAACC | 57.422 | 33.333 | 0.00 | 0.00 | 30.33 | 2.85 |
5675 | 6048 | 8.861101 | GTCACATGTTTGTCTACTACATAAGTC | 58.139 | 37.037 | 0.00 | 0.00 | 38.10 | 3.01 |
5677 | 6050 | 8.988064 | AGTCACATGTTTGTCTACTACATAAG | 57.012 | 34.615 | 0.00 | 0.00 | 38.10 | 1.73 |
5678 | 6051 | 9.772973 | AAAGTCACATGTTTGTCTACTACATAA | 57.227 | 29.630 | 0.00 | 0.00 | 38.10 | 1.90 |
5679 | 6052 | 9.772973 | AAAAGTCACATGTTTGTCTACTACATA | 57.227 | 29.630 | 0.00 | 0.00 | 38.10 | 2.29 |
5680 | 6053 | 8.677148 | AAAAGTCACATGTTTGTCTACTACAT | 57.323 | 30.769 | 0.00 | 0.00 | 38.10 | 2.29 |
5681 | 6054 | 8.500753 | AAAAAGTCACATGTTTGTCTACTACA | 57.499 | 30.769 | 0.00 | 0.00 | 32.34 | 2.74 |
5753 | 6760 | 1.804748 | GCTACTGCTGGTTGGTTACAC | 59.195 | 52.381 | 0.00 | 0.00 | 36.03 | 2.90 |
5794 | 6804 | 3.067106 | CAACATCGCCTAACTTCACTGT | 58.933 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
5795 | 6805 | 3.067106 | ACAACATCGCCTAACTTCACTG | 58.933 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
5796 | 6806 | 3.326747 | GACAACATCGCCTAACTTCACT | 58.673 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
5797 | 6807 | 2.415512 | GGACAACATCGCCTAACTTCAC | 59.584 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
5798 | 6808 | 2.037902 | TGGACAACATCGCCTAACTTCA | 59.962 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
5799 | 6809 | 2.695359 | TGGACAACATCGCCTAACTTC | 58.305 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
5800 | 6810 | 2.851263 | TGGACAACATCGCCTAACTT | 57.149 | 45.000 | 0.00 | 0.00 | 0.00 | 2.66 |
5802 | 6812 | 1.670811 | CCATGGACAACATCGCCTAAC | 59.329 | 52.381 | 5.56 | 0.00 | 37.84 | 2.34 |
5804 | 6814 | 0.908910 | ACCATGGACAACATCGCCTA | 59.091 | 50.000 | 21.47 | 0.00 | 37.84 | 3.93 |
5805 | 6815 | 0.038166 | AACCATGGACAACATCGCCT | 59.962 | 50.000 | 21.47 | 0.00 | 37.84 | 5.52 |
5806 | 6816 | 1.745232 | TAACCATGGACAACATCGCC | 58.255 | 50.000 | 21.47 | 0.00 | 37.84 | 5.54 |
5840 | 7247 | 5.303971 | AGCCATGAATAATGAGACAGTAGC | 58.696 | 41.667 | 0.00 | 0.00 | 38.72 | 3.58 |
5887 | 7296 | 7.415095 | CCATCATGCTGAAAATAAGTTTACCGA | 60.415 | 37.037 | 0.00 | 0.00 | 0.00 | 4.69 |
5888 | 7297 | 6.692681 | CCATCATGCTGAAAATAAGTTTACCG | 59.307 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
5913 | 7322 | 5.047377 | TGTTGAGGGGATGCTTAACAAAATC | 60.047 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
6106 | 7516 | 5.011125 | AGCCATCATAAGCGTGAATAGTAGT | 59.989 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
6251 | 7661 | 0.035439 | ACATTACCCGTTGGCAGAGG | 60.035 | 55.000 | 3.64 | 3.64 | 33.59 | 3.69 |
6294 | 7704 | 9.760077 | AAATTACTCTACAAATAGTATGACGGG | 57.240 | 33.333 | 0.00 | 0.00 | 30.93 | 5.28 |
6324 | 7778 | 7.611467 | AGAGACAATTAATGCCACACATCTAAA | 59.389 | 33.333 | 0.00 | 0.00 | 38.34 | 1.85 |
6347 | 7801 | 3.993081 | CCAGAAGACTGCAGTACAAAGAG | 59.007 | 47.826 | 21.73 | 6.77 | 42.25 | 2.85 |
6355 | 7809 | 1.550327 | TCGATCCAGAAGACTGCAGT | 58.450 | 50.000 | 21.88 | 21.88 | 42.25 | 4.40 |
6357 | 7811 | 2.100418 | CTGATCGATCCAGAAGACTGCA | 59.900 | 50.000 | 22.31 | 0.00 | 42.25 | 4.41 |
6565 | 8019 | 0.693049 | AACTGAATCCTTCCCAGCGT | 59.307 | 50.000 | 0.00 | 0.00 | 0.00 | 5.07 |
6668 | 8122 | 4.946784 | ATAACAAACGCTTTGCTCCTAG | 57.053 | 40.909 | 9.44 | 0.00 | 44.39 | 3.02 |
6676 | 8130 | 3.434299 | CGACCTGGTATAACAAACGCTTT | 59.566 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
6681 | 8135 | 3.124636 | CACTGCGACCTGGTATAACAAAC | 59.875 | 47.826 | 0.00 | 0.00 | 0.00 | 2.93 |
6704 | 8158 | 4.710324 | TCTTGGGGCCGTTAATATTAGTG | 58.290 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
6729 | 8184 | 2.023888 | ACCTAGATATCATAGCGCCCCT | 60.024 | 50.000 | 2.29 | 0.00 | 0.00 | 4.79 |
6733 | 8188 | 8.675504 | TCTAGTTAAACCTAGATATCATAGCGC | 58.324 | 37.037 | 0.00 | 0.00 | 38.76 | 5.92 |
6985 | 8444 | 3.861276 | ACATGCACTGTCAATCAATGG | 57.139 | 42.857 | 0.00 | 0.00 | 29.94 | 3.16 |
7040 | 8502 | 9.406113 | CAGACAGACAGATAGATATGATATGGA | 57.594 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
7045 | 8507 | 9.761504 | CAAAACAGACAGACAGATAGATATGAT | 57.238 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
7046 | 8508 | 8.200120 | CCAAAACAGACAGACAGATAGATATGA | 58.800 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
7054 | 8516 | 3.213206 | TGCCAAAACAGACAGACAGAT | 57.787 | 42.857 | 0.00 | 0.00 | 0.00 | 2.90 |
7055 | 8517 | 2.708216 | TGCCAAAACAGACAGACAGA | 57.292 | 45.000 | 0.00 | 0.00 | 0.00 | 3.41 |
7056 | 8518 | 3.567164 | AGAATGCCAAAACAGACAGACAG | 59.433 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
7057 | 8519 | 3.554934 | AGAATGCCAAAACAGACAGACA | 58.445 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
7058 | 8520 | 5.412594 | TCATAGAATGCCAAAACAGACAGAC | 59.587 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
7059 | 8521 | 5.559770 | TCATAGAATGCCAAAACAGACAGA | 58.440 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
7060 | 8522 | 5.885230 | TCATAGAATGCCAAAACAGACAG | 57.115 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
7207 | 8673 | 0.609406 | GGCCAGGGGAGAAGAACAAC | 60.609 | 60.000 | 0.00 | 0.00 | 0.00 | 3.32 |
7261 | 8744 | 0.099968 | CAGATTGATTGCAGGGCGTG | 59.900 | 55.000 | 2.14 | 2.14 | 0.00 | 5.34 |
7275 | 8758 | 3.262660 | TGAGCAGTCAAGATGGACAGATT | 59.737 | 43.478 | 0.00 | 0.00 | 40.29 | 2.40 |
7383 | 8870 | 2.071540 | TGCAGTGCAGATCTTTTCTCG | 58.928 | 47.619 | 15.37 | 0.00 | 33.32 | 4.04 |
7402 | 8889 | 1.086067 | CCGGTATGAGCAGTGCAGTG | 61.086 | 60.000 | 19.20 | 17.56 | 0.00 | 3.66 |
7403 | 8890 | 1.219124 | CCGGTATGAGCAGTGCAGT | 59.781 | 57.895 | 19.20 | 4.99 | 0.00 | 4.40 |
7408 | 8895 | 4.800914 | GCAAGATATTCCGGTATGAGCAGT | 60.801 | 45.833 | 0.00 | 0.00 | 0.00 | 4.40 |
7410 | 8897 | 3.664107 | GCAAGATATTCCGGTATGAGCA | 58.336 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
7411 | 8898 | 2.668457 | CGCAAGATATTCCGGTATGAGC | 59.332 | 50.000 | 0.00 | 0.00 | 43.02 | 4.26 |
7412 | 8899 | 2.668457 | GCGCAAGATATTCCGGTATGAG | 59.332 | 50.000 | 0.30 | 0.00 | 43.02 | 2.90 |
7413 | 8900 | 2.036604 | TGCGCAAGATATTCCGGTATGA | 59.963 | 45.455 | 8.16 | 0.00 | 43.02 | 2.15 |
7415 | 8902 | 2.037251 | ACTGCGCAAGATATTCCGGTAT | 59.963 | 45.455 | 13.05 | 0.00 | 43.02 | 2.73 |
7416 | 8903 | 1.411246 | ACTGCGCAAGATATTCCGGTA | 59.589 | 47.619 | 13.05 | 0.00 | 43.02 | 4.02 |
7417 | 8904 | 0.178068 | ACTGCGCAAGATATTCCGGT | 59.822 | 50.000 | 13.05 | 0.00 | 43.02 | 5.28 |
7418 | 8905 | 1.299541 | AACTGCGCAAGATATTCCGG | 58.700 | 50.000 | 13.05 | 0.00 | 43.02 | 5.14 |
7419 | 8906 | 2.286418 | GGAAACTGCGCAAGATATTCCG | 60.286 | 50.000 | 13.05 | 0.00 | 43.02 | 4.30 |
7547 | 9040 | 3.244249 | GGATCTTTCAGGATAAGGGGTCG | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 4.79 |
7549 | 9042 | 3.056832 | GGGATCTTTCAGGATAAGGGGT | 58.943 | 50.000 | 0.00 | 0.00 | 0.00 | 4.95 |
7599 | 9092 | 1.227380 | CCTAGGATCGTGCTGTGCC | 60.227 | 63.158 | 1.05 | 0.00 | 0.00 | 5.01 |
7650 | 9143 | 2.250485 | CCTTGTCGTCGTCGTCGT | 59.750 | 61.111 | 11.41 | 0.00 | 38.33 | 4.34 |
7739 | 9234 | 1.357137 | TCCATTAGCCGCCATGGATA | 58.643 | 50.000 | 18.40 | 0.00 | 43.44 | 2.59 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.