Multiple sequence alignment - TraesCS2D01G503800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G503800 chr2D 100.000 4073 0 0 1 4073 598609738 598613810 0.000000e+00 7522.0
1 TraesCS2D01G503800 chr2D 76.677 1282 240 47 1816 3066 595508346 595509599 0.000000e+00 656.0
2 TraesCS2D01G503800 chr2B 95.839 2740 81 11 1338 4073 726463640 726466350 0.000000e+00 4397.0
3 TraesCS2D01G503800 chr2B 78.721 1048 185 28 2040 3066 723429673 723430703 0.000000e+00 665.0
4 TraesCS2D01G503800 chr2B 92.199 423 14 3 874 1277 726463211 726463633 7.590000e-162 580.0
5 TraesCS2D01G503800 chr2B 88.398 181 12 8 13 188 726462874 726463050 4.130000e-50 209.0
6 TraesCS2D01G503800 chr2B 96.907 97 3 0 264 360 726463130 726463226 3.260000e-36 163.0
7 TraesCS2D01G503800 chr2B 80.822 73 11 3 13 83 739499916 739499987 2.000000e-03 54.7
8 TraesCS2D01G503800 chr2A 97.079 2499 45 9 981 3465 732545281 732547765 0.000000e+00 4185.0
9 TraesCS2D01G503800 chr2A 96.270 1126 28 2 981 2092 732507614 732508739 0.000000e+00 1834.0
10 TraesCS2D01G503800 chr2A 95.438 1074 32 3 1033 2092 732519371 732520441 0.000000e+00 1696.0
11 TraesCS2D01G503800 chr2A 98.361 427 7 0 3647 4073 732547927 732548353 0.000000e+00 750.0
12 TraesCS2D01G503800 chr2A 79.698 995 168 24 2086 3066 729568253 729569227 0.000000e+00 688.0
13 TraesCS2D01G503800 chr2A 92.308 377 8 5 1 360 732544845 732545217 2.170000e-142 516.0
14 TraesCS2D01G503800 chr2A 91.755 376 10 10 1 360 732507180 732507550 1.690000e-138 503.0
15 TraesCS2D01G503800 chr2A 97.973 148 2 1 3452 3598 732547782 732547929 5.220000e-64 255.0
16 TraesCS2D01G503800 chr2A 95.833 48 1 1 874 920 732507535 732507582 4.370000e-10 76.8
17 TraesCS2D01G503800 chr2A 95.833 48 1 1 874 920 732545202 732545249 4.370000e-10 76.8
18 TraesCS2D01G503800 chr2A 97.222 36 1 0 3010 3045 766003288 766003253 1.220000e-05 62.1
19 TraesCS2D01G503800 chr2A 94.737 38 2 0 3010 3047 138517679 138517642 4.400000e-05 60.2
20 TraesCS2D01G503800 chr2A 85.000 60 3 4 913 968 732507587 732507644 5.690000e-04 56.5
21 TraesCS2D01G503800 chr2A 85.000 60 3 4 913 968 732545254 732545311 5.690000e-04 56.5
22 TraesCS2D01G503800 chr7D 96.755 493 14 2 384 874 46894984 46895476 0.000000e+00 821.0
23 TraesCS2D01G503800 chr7D 94.695 377 19 1 499 874 619010836 619010460 5.870000e-163 584.0
24 TraesCS2D01G503800 chr5D 93.927 494 27 3 384 874 486290376 486290869 0.000000e+00 743.0
25 TraesCS2D01G503800 chr3A 88.641 493 52 4 384 874 510635520 510636010 7.540000e-167 597.0
26 TraesCS2D01G503800 chrUn 88.260 477 54 2 400 874 34698737 34698261 1.640000e-158 569.0
27 TraesCS2D01G503800 chrUn 100.000 28 0 0 3471 3498 45828162 45828189 7.000000e-03 52.8
28 TraesCS2D01G503800 chrUn 100.000 28 0 0 3471 3498 323578085 323578058 7.000000e-03 52.8
29 TraesCS2D01G503800 chr7A 90.000 410 31 5 3665 4073 236860432 236860032 4.670000e-144 521.0
30 TraesCS2D01G503800 chr7A 97.015 67 2 0 3570 3636 236860488 236860422 3.330000e-21 113.0
31 TraesCS2D01G503800 chr6B 86.279 481 63 3 394 873 114963435 114963913 1.680000e-143 520.0
32 TraesCS2D01G503800 chr6B 84.679 483 73 1 394 875 120332003 120332485 7.920000e-132 481.0
33 TraesCS2D01G503800 chr6B 85.294 204 15 5 3790 3979 54416604 54416806 3.210000e-46 196.0
34 TraesCS2D01G503800 chr6B 91.228 57 5 0 4017 4073 515433500 515433556 1.210000e-10 78.7
35 TraesCS2D01G503800 chr7B 85.242 454 65 2 423 874 61047838 61047385 2.220000e-127 466.0
36 TraesCS2D01G503800 chr7B 90.909 55 2 1 2 56 713436178 713436127 2.030000e-08 71.3
37 TraesCS2D01G503800 chr7B 88.889 54 4 2 3 56 733543035 733543086 9.450000e-07 65.8
38 TraesCS2D01G503800 chr3B 83.851 483 75 3 394 874 767761456 767761937 1.330000e-124 457.0
39 TraesCS2D01G503800 chr3B 79.762 84 13 2 1 83 750461290 750461210 1.580000e-04 58.4
40 TraesCS2D01G503800 chr1A 74.099 1027 209 48 2088 3081 497887781 497886779 1.790000e-98 370.0
41 TraesCS2D01G503800 chr1D 85.385 130 8 8 85 206 340550603 340550477 1.540000e-24 124.0
42 TraesCS2D01G503800 chr5B 90.625 64 6 0 4010 4073 93673778 93673841 7.250000e-13 86.1
43 TraesCS2D01G503800 chr1B 81.308 107 14 3 2963 3066 540338364 540338261 9.380000e-12 82.4
44 TraesCS2D01G503800 chr5A 83.099 71 10 2 15 83 236884423 236884493 3.400000e-06 63.9
45 TraesCS2D01G503800 chr4D 85.000 60 7 2 14 71 357433522 357433581 4.400000e-05 60.2
46 TraesCS2D01G503800 chr3D 100.000 28 0 0 3471 3498 599436732 599436759 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G503800 chr2D 598609738 598613810 4072 False 7522.000000 7522 100.000000 1 4073 1 chr2D.!!$F2 4072
1 TraesCS2D01G503800 chr2D 595508346 595509599 1253 False 656.000000 656 76.677000 1816 3066 1 chr2D.!!$F1 1250
2 TraesCS2D01G503800 chr2B 726462874 726466350 3476 False 1337.250000 4397 93.335750 13 4073 4 chr2B.!!$F3 4060
3 TraesCS2D01G503800 chr2B 723429673 723430703 1030 False 665.000000 665 78.721000 2040 3066 1 chr2B.!!$F1 1026
4 TraesCS2D01G503800 chr2A 732519371 732520441 1070 False 1696.000000 1696 95.438000 1033 2092 1 chr2A.!!$F2 1059
5 TraesCS2D01G503800 chr2A 732544845 732548353 3508 False 973.216667 4185 94.425667 1 4073 6 chr2A.!!$F4 4072
6 TraesCS2D01G503800 chr2A 729568253 729569227 974 False 688.000000 688 79.698000 2086 3066 1 chr2A.!!$F1 980
7 TraesCS2D01G503800 chr2A 732507180 732508739 1559 False 617.575000 1834 92.214500 1 2092 4 chr2A.!!$F3 2091
8 TraesCS2D01G503800 chr1A 497886779 497887781 1002 True 370.000000 370 74.099000 2088 3081 1 chr1A.!!$R1 993

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
517 576 0.034380 CTAGTGGTCGAGGGAGTGGA 60.034 60.0 0.00 0.00 0.0 4.02 F
949 1068 0.038159 CCCTCCTAAATAGAGCGGCG 60.038 60.0 0.51 0.51 0.0 6.46 F
950 1069 0.038159 CCTCCTAAATAGAGCGGCGG 60.038 60.0 9.78 0.00 0.0 6.13 F
2193 2336 0.383231 CCGCATCCCAATTGAAGCTC 59.617 55.0 7.12 0.00 0.0 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1482 1613 0.036294 CCTCCTTTCGGGTCTGTTCC 60.036 60.000 0.00 0.0 36.25 3.62 R
2193 2336 1.955080 CTGTAAGGTACTCCCGGCTAG 59.045 57.143 0.00 0.0 38.49 3.42 R
2244 2387 2.171237 CCTCCACTGGCAATGTGAGATA 59.829 50.000 13.55 0.0 37.60 1.98 R
3369 3535 0.962356 ATTTGGTCGCAAGCAGGGAG 60.962 55.000 0.00 0.0 40.18 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
183 187 4.700037 CGCAGCACAACCGAAAAA 57.300 50.000 0.00 0.00 0.00 1.94
298 357 3.574074 ATGCTGGGCCGCTGTTCTT 62.574 57.895 18.47 0.00 0.00 2.52
344 403 6.504398 CCTGAGAGAAAGTATATAACACGCA 58.496 40.000 0.00 0.00 0.00 5.24
345 404 6.418226 CCTGAGAGAAAGTATATAACACGCAC 59.582 42.308 0.00 0.00 0.00 5.34
346 405 7.096884 TGAGAGAAAGTATATAACACGCACT 57.903 36.000 0.00 0.00 0.00 4.40
347 406 7.194278 TGAGAGAAAGTATATAACACGCACTC 58.806 38.462 0.00 0.00 0.00 3.51
348 407 6.200100 AGAGAAAGTATATAACACGCACTCG 58.800 40.000 0.00 0.00 42.43 4.18
349 408 4.738740 AGAAAGTATATAACACGCACTCGC 59.261 41.667 0.00 0.00 39.84 5.03
350 409 3.009301 AGTATATAACACGCACTCGCC 57.991 47.619 0.00 0.00 39.84 5.54
351 410 1.712350 GTATATAACACGCACTCGCCG 59.288 52.381 0.00 0.00 39.84 6.46
352 411 0.101759 ATATAACACGCACTCGCCGT 59.898 50.000 0.00 0.00 39.84 5.68
353 412 0.523968 TATAACACGCACTCGCCGTC 60.524 55.000 0.00 0.00 39.84 4.79
354 413 3.781586 TATAACACGCACTCGCCGTCC 62.782 57.143 0.00 0.00 39.84 4.79
360 419 4.351938 CACTCGCCGTCCGAACCA 62.352 66.667 0.00 0.00 46.81 3.67
361 420 4.353437 ACTCGCCGTCCGAACCAC 62.353 66.667 0.00 0.00 46.81 4.16
365 424 4.309950 GCCGTCCGAACCACCAGT 62.310 66.667 0.00 0.00 0.00 4.00
366 425 2.424302 CCGTCCGAACCACCAGTT 59.576 61.111 0.00 0.00 43.07 3.16
367 426 1.959226 CCGTCCGAACCACCAGTTG 60.959 63.158 0.00 0.00 39.40 3.16
379 438 3.344703 CCAGTTGGATGGTGCAAGA 57.655 52.632 0.00 0.00 37.39 3.02
380 439 1.843368 CCAGTTGGATGGTGCAAGAT 58.157 50.000 0.00 0.00 37.39 2.40
381 440 2.173519 CCAGTTGGATGGTGCAAGATT 58.826 47.619 0.00 0.00 37.39 2.40
382 441 2.165030 CCAGTTGGATGGTGCAAGATTC 59.835 50.000 0.00 0.00 37.39 2.52
383 442 2.821378 CAGTTGGATGGTGCAAGATTCA 59.179 45.455 0.00 0.00 0.00 2.57
384 443 2.821969 AGTTGGATGGTGCAAGATTCAC 59.178 45.455 0.00 0.00 0.00 3.18
385 444 2.557924 GTTGGATGGTGCAAGATTCACA 59.442 45.455 0.00 0.00 36.22 3.58
386 445 3.090210 TGGATGGTGCAAGATTCACAT 57.910 42.857 0.00 0.00 36.22 3.21
387 446 3.018856 TGGATGGTGCAAGATTCACATC 58.981 45.455 0.00 0.00 36.22 3.06
388 447 2.360165 GGATGGTGCAAGATTCACATCC 59.640 50.000 5.83 5.83 36.26 3.51
389 448 2.885135 TGGTGCAAGATTCACATCCT 57.115 45.000 0.00 0.00 36.22 3.24
390 449 2.439409 TGGTGCAAGATTCACATCCTG 58.561 47.619 0.00 0.00 36.22 3.86
391 450 1.133790 GGTGCAAGATTCACATCCTGC 59.866 52.381 0.00 0.00 44.36 4.85
392 451 2.089980 GTGCAAGATTCACATCCTGCT 58.910 47.619 7.20 0.00 44.40 4.24
393 452 2.089201 TGCAAGATTCACATCCTGCTG 58.911 47.619 7.20 0.00 44.40 4.41
394 453 1.404391 GCAAGATTCACATCCTGCTGG 59.596 52.381 2.58 2.58 41.85 4.85
395 454 2.942752 GCAAGATTCACATCCTGCTGGA 60.943 50.000 15.40 15.40 41.85 3.86
403 462 3.169378 TCCTGCTGGATGGTGCAA 58.831 55.556 8.48 0.00 38.81 4.08
404 463 1.001764 TCCTGCTGGATGGTGCAAG 60.002 57.895 8.48 0.00 38.81 4.01
405 464 1.001764 CCTGCTGGATGGTGCAAGA 60.002 57.895 2.92 0.00 38.81 3.02
406 465 0.395311 CCTGCTGGATGGTGCAAGAT 60.395 55.000 2.92 0.00 38.81 2.40
407 466 1.471119 CTGCTGGATGGTGCAAGATT 58.529 50.000 0.00 0.00 38.81 2.40
408 467 1.404391 CTGCTGGATGGTGCAAGATTC 59.596 52.381 0.00 0.00 38.81 2.52
409 468 1.272037 TGCTGGATGGTGCAAGATTCA 60.272 47.619 0.00 0.00 36.15 2.57
410 469 2.029623 GCTGGATGGTGCAAGATTCAT 58.970 47.619 0.00 0.00 0.00 2.57
411 470 2.223735 GCTGGATGGTGCAAGATTCATG 60.224 50.000 0.00 0.00 0.00 3.07
412 471 3.021695 CTGGATGGTGCAAGATTCATGT 58.978 45.455 0.00 0.00 0.00 3.21
413 472 2.756207 TGGATGGTGCAAGATTCATGTG 59.244 45.455 0.00 0.00 0.00 3.21
414 473 2.100252 GGATGGTGCAAGATTCATGTGG 59.900 50.000 0.00 0.00 0.00 4.17
415 474 2.583024 TGGTGCAAGATTCATGTGGA 57.417 45.000 0.00 0.00 0.00 4.02
416 475 2.161855 TGGTGCAAGATTCATGTGGAC 58.838 47.619 0.00 0.00 33.30 4.02
417 476 2.161855 GGTGCAAGATTCATGTGGACA 58.838 47.619 7.12 0.00 35.52 4.02
418 477 2.095059 GGTGCAAGATTCATGTGGACAC 60.095 50.000 7.12 0.00 35.52 3.67
419 478 2.095059 GTGCAAGATTCATGTGGACACC 60.095 50.000 0.00 0.00 34.15 4.16
420 479 1.131126 GCAAGATTCATGTGGACACCG 59.869 52.381 0.00 0.00 0.00 4.94
421 480 1.739466 CAAGATTCATGTGGACACCGG 59.261 52.381 0.00 0.00 0.00 5.28
422 481 0.253044 AGATTCATGTGGACACCGGG 59.747 55.000 6.32 0.00 0.00 5.73
423 482 0.748005 GATTCATGTGGACACCGGGG 60.748 60.000 0.00 0.00 0.00 5.73
424 483 1.497309 ATTCATGTGGACACCGGGGT 61.497 55.000 10.56 10.56 0.00 4.95
425 484 0.836830 TTCATGTGGACACCGGGGTA 60.837 55.000 10.83 0.00 0.00 3.69
426 485 0.836830 TCATGTGGACACCGGGGTAA 60.837 55.000 10.83 0.00 0.00 2.85
427 486 0.254747 CATGTGGACACCGGGGTAAT 59.745 55.000 10.83 0.00 0.00 1.89
428 487 0.254747 ATGTGGACACCGGGGTAATG 59.745 55.000 10.83 0.00 0.00 1.90
429 488 1.078001 GTGGACACCGGGGTAATGG 60.078 63.158 10.83 0.00 0.00 3.16
430 489 1.229561 TGGACACCGGGGTAATGGA 60.230 57.895 10.83 0.00 0.00 3.41
431 490 0.841158 TGGACACCGGGGTAATGGAA 60.841 55.000 10.83 0.00 0.00 3.53
432 491 0.328926 GGACACCGGGGTAATGGAAA 59.671 55.000 10.83 0.00 0.00 3.13
433 492 1.680860 GGACACCGGGGTAATGGAAAG 60.681 57.143 10.83 0.00 0.00 2.62
434 493 1.279846 GACACCGGGGTAATGGAAAGA 59.720 52.381 10.83 0.00 0.00 2.52
435 494 1.706305 ACACCGGGGTAATGGAAAGAA 59.294 47.619 8.17 0.00 0.00 2.52
436 495 2.290705 ACACCGGGGTAATGGAAAGAAG 60.291 50.000 8.17 0.00 0.00 2.85
437 496 2.026636 CACCGGGGTAATGGAAAGAAGA 60.027 50.000 6.32 0.00 0.00 2.87
438 497 2.238898 ACCGGGGTAATGGAAAGAAGAG 59.761 50.000 6.32 0.00 0.00 2.85
439 498 2.421529 CCGGGGTAATGGAAAGAAGAGG 60.422 54.545 0.00 0.00 0.00 3.69
440 499 2.504175 CGGGGTAATGGAAAGAAGAGGA 59.496 50.000 0.00 0.00 0.00 3.71
441 500 3.432326 CGGGGTAATGGAAAGAAGAGGAG 60.432 52.174 0.00 0.00 0.00 3.69
442 501 3.117851 GGGGTAATGGAAAGAAGAGGAGG 60.118 52.174 0.00 0.00 0.00 4.30
443 502 3.780850 GGGTAATGGAAAGAAGAGGAGGA 59.219 47.826 0.00 0.00 0.00 3.71
444 503 4.413851 GGGTAATGGAAAGAAGAGGAGGAT 59.586 45.833 0.00 0.00 0.00 3.24
445 504 5.455469 GGGTAATGGAAAGAAGAGGAGGATC 60.455 48.000 0.00 0.00 0.00 3.36
446 505 5.368230 GGTAATGGAAAGAAGAGGAGGATCT 59.632 44.000 0.00 0.00 33.73 2.75
447 506 5.370875 AATGGAAAGAAGAGGAGGATCTG 57.629 43.478 0.00 0.00 33.73 2.90
448 507 2.503356 TGGAAAGAAGAGGAGGATCTGC 59.497 50.000 0.00 0.00 33.73 4.26
449 508 2.482839 GGAAAGAAGAGGAGGATCTGCG 60.483 54.545 0.00 0.00 33.73 5.18
450 509 1.118838 AAGAAGAGGAGGATCTGCGG 58.881 55.000 0.00 0.00 33.73 5.69
451 510 1.068921 GAAGAGGAGGATCTGCGGC 59.931 63.158 0.00 0.00 33.73 6.53
452 511 1.680522 GAAGAGGAGGATCTGCGGCA 61.681 60.000 1.29 1.29 33.73 5.69
453 512 1.684386 AAGAGGAGGATCTGCGGCAG 61.684 60.000 23.72 23.72 33.73 4.85
454 513 3.805891 GAGGAGGATCTGCGGCAGC 62.806 68.421 24.78 11.83 45.41 5.25
464 523 3.966215 GCGGCAGCAGTTTGTAGA 58.034 55.556 3.18 0.00 44.35 2.59
465 524 1.790387 GCGGCAGCAGTTTGTAGAG 59.210 57.895 3.18 0.00 44.35 2.43
466 525 0.670546 GCGGCAGCAGTTTGTAGAGA 60.671 55.000 3.18 0.00 44.35 3.10
467 526 2.009042 GCGGCAGCAGTTTGTAGAGAT 61.009 52.381 3.18 0.00 44.35 2.75
468 527 2.350522 CGGCAGCAGTTTGTAGAGATT 58.649 47.619 0.00 0.00 0.00 2.40
469 528 2.349886 CGGCAGCAGTTTGTAGAGATTC 59.650 50.000 0.00 0.00 0.00 2.52
470 529 3.338249 GGCAGCAGTTTGTAGAGATTCA 58.662 45.455 0.00 0.00 0.00 2.57
471 530 3.373439 GGCAGCAGTTTGTAGAGATTCAG 59.627 47.826 0.00 0.00 0.00 3.02
472 531 3.181512 GCAGCAGTTTGTAGAGATTCAGC 60.182 47.826 0.00 0.00 0.00 4.26
473 532 3.373439 CAGCAGTTTGTAGAGATTCAGCC 59.627 47.826 0.00 0.00 0.00 4.85
474 533 2.349886 GCAGTTTGTAGAGATTCAGCCG 59.650 50.000 0.00 0.00 0.00 5.52
475 534 2.932614 CAGTTTGTAGAGATTCAGCCGG 59.067 50.000 0.00 0.00 0.00 6.13
476 535 2.832129 AGTTTGTAGAGATTCAGCCGGA 59.168 45.455 5.05 0.00 0.00 5.14
477 536 3.260884 AGTTTGTAGAGATTCAGCCGGAA 59.739 43.478 5.05 0.00 40.46 4.30
478 537 3.973206 TTGTAGAGATTCAGCCGGAAA 57.027 42.857 5.05 0.00 39.39 3.13
479 538 3.247006 TGTAGAGATTCAGCCGGAAAC 57.753 47.619 5.05 0.00 39.39 2.78
480 539 2.832129 TGTAGAGATTCAGCCGGAAACT 59.168 45.455 5.05 0.00 40.88 2.66
481 540 4.021229 TGTAGAGATTCAGCCGGAAACTA 58.979 43.478 5.05 0.00 38.59 2.24
482 541 3.528597 AGAGATTCAGCCGGAAACTAC 57.471 47.619 5.05 0.00 38.59 2.73
483 542 2.832129 AGAGATTCAGCCGGAAACTACA 59.168 45.455 5.05 0.00 38.59 2.74
484 543 3.452627 AGAGATTCAGCCGGAAACTACAT 59.547 43.478 5.05 0.00 38.59 2.29
485 544 3.535561 AGATTCAGCCGGAAACTACATG 58.464 45.455 5.05 0.00 36.92 3.21
486 545 2.107950 TTCAGCCGGAAACTACATGG 57.892 50.000 5.05 0.00 30.98 3.66
487 546 0.251916 TCAGCCGGAAACTACATGGG 59.748 55.000 5.05 0.00 0.00 4.00
488 547 1.077716 AGCCGGAAACTACATGGGC 60.078 57.895 5.05 0.00 40.80 5.36
489 548 1.377987 GCCGGAAACTACATGGGCA 60.378 57.895 5.05 0.00 40.24 5.36
490 549 1.376609 GCCGGAAACTACATGGGCAG 61.377 60.000 5.05 0.00 40.24 4.85
491 550 1.376609 CCGGAAACTACATGGGCAGC 61.377 60.000 0.00 0.00 0.00 5.25
492 551 0.392998 CGGAAACTACATGGGCAGCT 60.393 55.000 0.00 0.00 0.00 4.24
493 552 1.383523 GGAAACTACATGGGCAGCTC 58.616 55.000 0.00 0.00 0.00 4.09
494 553 1.009829 GAAACTACATGGGCAGCTCG 58.990 55.000 0.00 0.00 0.00 5.03
495 554 0.392998 AAACTACATGGGCAGCTCGG 60.393 55.000 0.00 0.00 0.00 4.63
496 555 2.590007 CTACATGGGCAGCTCGGC 60.590 66.667 0.00 0.00 40.20 5.54
504 563 4.537433 GCAGCTCGGCCCTAGTGG 62.537 72.222 0.00 0.00 37.09 4.00
505 564 3.077556 CAGCTCGGCCCTAGTGGT 61.078 66.667 0.00 0.00 36.04 4.16
506 565 2.760385 AGCTCGGCCCTAGTGGTC 60.760 66.667 0.00 0.00 36.04 4.02
515 574 2.494677 CCTAGTGGTCGAGGGAGTG 58.505 63.158 0.00 0.00 33.68 3.51
516 575 1.038130 CCTAGTGGTCGAGGGAGTGG 61.038 65.000 0.00 0.00 33.68 4.00
517 576 0.034380 CTAGTGGTCGAGGGAGTGGA 60.034 60.000 0.00 0.00 0.00 4.02
518 577 0.406750 TAGTGGTCGAGGGAGTGGAA 59.593 55.000 0.00 0.00 0.00 3.53
519 578 0.900647 AGTGGTCGAGGGAGTGGAAG 60.901 60.000 0.00 0.00 0.00 3.46
520 579 0.898789 GTGGTCGAGGGAGTGGAAGA 60.899 60.000 0.00 0.00 0.00 2.87
521 580 0.041238 TGGTCGAGGGAGTGGAAGAT 59.959 55.000 0.00 0.00 0.00 2.40
522 581 1.196012 GGTCGAGGGAGTGGAAGATT 58.804 55.000 0.00 0.00 0.00 2.40
523 582 1.137282 GGTCGAGGGAGTGGAAGATTC 59.863 57.143 0.00 0.00 0.00 2.52
524 583 1.103803 TCGAGGGAGTGGAAGATTCG 58.896 55.000 0.00 0.00 0.00 3.34
525 584 0.103208 CGAGGGAGTGGAAGATTCGG 59.897 60.000 0.00 0.00 0.00 4.30
526 585 0.179070 GAGGGAGTGGAAGATTCGGC 60.179 60.000 0.00 0.00 0.00 5.54
527 586 1.521681 GGGAGTGGAAGATTCGGCG 60.522 63.158 0.00 0.00 0.00 6.46
528 587 1.515954 GGAGTGGAAGATTCGGCGA 59.484 57.895 4.99 4.99 0.00 5.54
529 588 0.806492 GGAGTGGAAGATTCGGCGAC 60.806 60.000 10.16 0.00 0.00 5.19
530 589 0.108804 GAGTGGAAGATTCGGCGACA 60.109 55.000 10.16 0.00 0.00 4.35
531 590 0.389948 AGTGGAAGATTCGGCGACAC 60.390 55.000 10.16 13.65 0.00 3.67
532 591 0.389948 GTGGAAGATTCGGCGACACT 60.390 55.000 10.16 9.31 0.00 3.55
533 592 0.320374 TGGAAGATTCGGCGACACTT 59.680 50.000 21.67 21.67 0.00 3.16
534 593 1.546923 TGGAAGATTCGGCGACACTTA 59.453 47.619 21.58 4.37 0.00 2.24
535 594 2.028839 TGGAAGATTCGGCGACACTTAA 60.029 45.455 21.58 13.52 0.00 1.85
536 595 2.997986 GGAAGATTCGGCGACACTTAAA 59.002 45.455 21.58 2.97 0.00 1.52
537 596 3.062234 GGAAGATTCGGCGACACTTAAAG 59.938 47.826 21.58 0.00 0.00 1.85
538 597 2.000447 AGATTCGGCGACACTTAAAGC 59.000 47.619 10.16 0.00 0.00 3.51
539 598 2.000447 GATTCGGCGACACTTAAAGCT 59.000 47.619 10.16 0.00 0.00 3.74
540 599 1.425412 TTCGGCGACACTTAAAGCTC 58.575 50.000 10.16 0.00 0.00 4.09
541 600 0.601558 TCGGCGACACTTAAAGCTCT 59.398 50.000 4.99 0.00 0.00 4.09
542 601 1.000506 TCGGCGACACTTAAAGCTCTT 59.999 47.619 4.99 0.00 0.00 2.85
543 602 1.126846 CGGCGACACTTAAAGCTCTTG 59.873 52.381 0.00 0.00 0.00 3.02
544 603 1.135944 GGCGACACTTAAAGCTCTTGC 60.136 52.381 0.00 0.00 40.05 4.01
554 613 3.882025 GCTCTTGCTTGTCGGGAG 58.118 61.111 0.00 0.00 36.03 4.30
555 614 1.743252 GCTCTTGCTTGTCGGGAGG 60.743 63.158 0.00 0.00 36.03 4.30
556 615 1.743252 CTCTTGCTTGTCGGGAGGC 60.743 63.158 0.00 0.00 0.00 4.70
557 616 3.121030 CTTGCTTGTCGGGAGGCG 61.121 66.667 0.00 0.00 37.19 5.52
558 617 3.883744 CTTGCTTGTCGGGAGGCGT 62.884 63.158 0.00 0.00 37.19 5.68
559 618 3.469863 TTGCTTGTCGGGAGGCGTT 62.470 57.895 0.00 0.00 37.19 4.84
560 619 2.102109 TTGCTTGTCGGGAGGCGTTA 62.102 55.000 0.00 0.00 37.19 3.18
561 620 1.153429 GCTTGTCGGGAGGCGTTAT 60.153 57.895 0.00 0.00 37.19 1.89
562 621 1.152383 GCTTGTCGGGAGGCGTTATC 61.152 60.000 0.00 0.00 37.19 1.75
563 622 0.529992 CTTGTCGGGAGGCGTTATCC 60.530 60.000 0.00 0.00 37.19 2.59
568 627 4.142780 GGAGGCGTTATCCCTTGC 57.857 61.111 0.00 0.00 31.41 4.01
569 628 1.223487 GGAGGCGTTATCCCTTGCA 59.777 57.895 0.00 0.00 31.41 4.08
570 629 0.815615 GGAGGCGTTATCCCTTGCAG 60.816 60.000 0.00 0.00 31.41 4.41
571 630 0.178068 GAGGCGTTATCCCTTGCAGA 59.822 55.000 0.00 0.00 31.41 4.26
572 631 0.618458 AGGCGTTATCCCTTGCAGAA 59.382 50.000 0.00 0.00 0.00 3.02
573 632 1.017387 GGCGTTATCCCTTGCAGAAG 58.983 55.000 0.00 0.00 0.00 2.85
574 633 1.406887 GGCGTTATCCCTTGCAGAAGA 60.407 52.381 0.00 0.00 0.00 2.87
575 634 2.565841 GCGTTATCCCTTGCAGAAGAT 58.434 47.619 0.00 0.00 0.00 2.40
576 635 3.494398 GGCGTTATCCCTTGCAGAAGATA 60.494 47.826 0.00 0.00 0.00 1.98
577 636 4.319177 GCGTTATCCCTTGCAGAAGATAT 58.681 43.478 3.40 0.00 0.00 1.63
578 637 4.153117 GCGTTATCCCTTGCAGAAGATATG 59.847 45.833 3.40 2.03 0.00 1.78
579 638 4.692625 CGTTATCCCTTGCAGAAGATATGG 59.307 45.833 3.40 0.00 0.00 2.74
580 639 3.803186 ATCCCTTGCAGAAGATATGGG 57.197 47.619 0.00 0.00 34.76 4.00
581 640 2.492025 TCCCTTGCAGAAGATATGGGT 58.508 47.619 0.00 0.00 35.00 4.51
582 641 3.664320 TCCCTTGCAGAAGATATGGGTA 58.336 45.455 0.00 0.00 35.00 3.69
583 642 4.242811 TCCCTTGCAGAAGATATGGGTAT 58.757 43.478 0.00 0.00 35.00 2.73
584 643 4.287067 TCCCTTGCAGAAGATATGGGTATC 59.713 45.833 0.00 0.00 37.55 2.24
585 644 4.566488 CCCTTGCAGAAGATATGGGTATCC 60.566 50.000 0.00 0.00 37.94 2.59
592 651 6.465035 GCAGAAGATATGGGTATCCAGAACTT 60.465 42.308 11.59 11.59 45.80 2.66
593 652 7.512992 CAGAAGATATGGGTATCCAGAACTTT 58.487 38.462 12.84 2.13 44.05 2.66
594 653 7.443575 CAGAAGATATGGGTATCCAGAACTTTG 59.556 40.741 12.84 9.49 44.05 2.77
595 654 7.127955 AGAAGATATGGGTATCCAGAACTTTGT 59.872 37.037 12.84 2.41 44.05 2.83
596 655 7.643123 AAGATATGGGTATCCAGAACTTTGTT 58.357 34.615 6.36 0.00 42.28 2.83
597 656 8.778059 AAGATATGGGTATCCAGAACTTTGTTA 58.222 33.333 6.36 0.00 42.28 2.41
601 660 5.417580 TGGGTATCCAGAACTTTGTTATTGC 59.582 40.000 0.00 0.00 38.32 3.56
602 661 5.163550 GGGTATCCAGAACTTTGTTATTGCC 60.164 44.000 0.00 0.00 0.00 4.52
603 662 5.652452 GGTATCCAGAACTTTGTTATTGCCT 59.348 40.000 0.00 0.00 0.00 4.75
604 663 5.904362 ATCCAGAACTTTGTTATTGCCTC 57.096 39.130 0.00 0.00 0.00 4.70
605 664 3.751175 TCCAGAACTTTGTTATTGCCTCG 59.249 43.478 0.00 0.00 0.00 4.63
606 665 3.119849 CCAGAACTTTGTTATTGCCTCGG 60.120 47.826 0.00 0.00 0.00 4.63
607 666 3.751175 CAGAACTTTGTTATTGCCTCGGA 59.249 43.478 0.00 0.00 0.00 4.55
608 667 3.751698 AGAACTTTGTTATTGCCTCGGAC 59.248 43.478 0.00 0.00 0.00 4.79
609 668 3.418684 ACTTTGTTATTGCCTCGGACT 57.581 42.857 0.00 0.00 0.00 3.85
610 669 3.074412 ACTTTGTTATTGCCTCGGACTG 58.926 45.455 0.00 0.00 0.00 3.51
611 670 1.448985 TTGTTATTGCCTCGGACTGC 58.551 50.000 0.00 0.00 0.00 4.40
612 671 0.392461 TGTTATTGCCTCGGACTGCC 60.392 55.000 0.00 0.00 0.00 4.85
613 672 0.392461 GTTATTGCCTCGGACTGCCA 60.392 55.000 0.00 0.00 0.00 4.92
614 673 0.107703 TTATTGCCTCGGACTGCCAG 60.108 55.000 0.00 0.00 0.00 4.85
615 674 2.593468 TATTGCCTCGGACTGCCAGC 62.593 60.000 0.00 0.00 0.00 4.85
617 676 4.704833 GCCTCGGACTGCCAGCAA 62.705 66.667 0.00 0.00 0.00 3.91
618 677 2.435586 CCTCGGACTGCCAGCAAG 60.436 66.667 0.00 0.00 0.00 4.01
619 678 2.345244 CTCGGACTGCCAGCAAGT 59.655 61.111 0.00 0.00 0.00 3.16
620 679 1.739562 CTCGGACTGCCAGCAAGTC 60.740 63.158 11.44 11.44 0.00 3.01
621 680 3.114616 CGGACTGCCAGCAAGTCG 61.115 66.667 12.75 5.42 33.72 4.18
622 681 2.031163 GGACTGCCAGCAAGTCGT 59.969 61.111 12.75 0.38 33.72 4.34
623 682 2.029844 GGACTGCCAGCAAGTCGTC 61.030 63.158 12.75 8.10 33.72 4.20
624 683 1.005630 GACTGCCAGCAAGTCGTCT 60.006 57.895 0.00 0.00 0.00 4.18
625 684 1.005630 ACTGCCAGCAAGTCGTCTC 60.006 57.895 0.00 0.00 0.00 3.36
626 685 1.005748 CTGCCAGCAAGTCGTCTCA 60.006 57.895 0.00 0.00 0.00 3.27
627 686 1.005748 TGCCAGCAAGTCGTCTCAG 60.006 57.895 0.00 0.00 0.00 3.35
628 687 1.290324 GCCAGCAAGTCGTCTCAGA 59.710 57.895 0.00 0.00 0.00 3.27
629 688 0.108424 GCCAGCAAGTCGTCTCAGAT 60.108 55.000 0.00 0.00 0.00 2.90
630 689 1.135139 GCCAGCAAGTCGTCTCAGATA 59.865 52.381 0.00 0.00 0.00 1.98
631 690 2.223923 GCCAGCAAGTCGTCTCAGATAT 60.224 50.000 0.00 0.00 0.00 1.63
632 691 3.637432 CCAGCAAGTCGTCTCAGATATC 58.363 50.000 0.00 0.00 0.00 1.63
633 692 3.067320 CCAGCAAGTCGTCTCAGATATCA 59.933 47.826 5.32 0.00 0.00 2.15
634 693 4.440663 CCAGCAAGTCGTCTCAGATATCAA 60.441 45.833 5.32 0.00 0.00 2.57
635 694 5.288015 CAGCAAGTCGTCTCAGATATCAAT 58.712 41.667 5.32 0.00 0.00 2.57
636 695 6.442112 CAGCAAGTCGTCTCAGATATCAATA 58.558 40.000 5.32 0.00 0.00 1.90
637 696 6.581919 CAGCAAGTCGTCTCAGATATCAATAG 59.418 42.308 5.32 0.00 0.00 1.73
638 697 5.861251 GCAAGTCGTCTCAGATATCAATAGG 59.139 44.000 5.32 0.00 0.00 2.57
639 698 6.294231 GCAAGTCGTCTCAGATATCAATAGGA 60.294 42.308 5.32 0.00 0.00 2.94
640 699 7.304735 CAAGTCGTCTCAGATATCAATAGGAG 58.695 42.308 5.32 4.14 0.00 3.69
641 700 5.943416 AGTCGTCTCAGATATCAATAGGAGG 59.057 44.000 5.32 2.39 0.00 4.30
642 701 5.708230 GTCGTCTCAGATATCAATAGGAGGT 59.292 44.000 5.32 0.00 0.00 3.85
643 702 5.941058 TCGTCTCAGATATCAATAGGAGGTC 59.059 44.000 5.32 1.74 0.00 3.85
644 703 5.707764 CGTCTCAGATATCAATAGGAGGTCA 59.292 44.000 5.32 0.00 0.00 4.02
645 704 6.348950 CGTCTCAGATATCAATAGGAGGTCAC 60.349 46.154 5.32 0.00 0.00 3.67
646 705 6.491745 GTCTCAGATATCAATAGGAGGTCACA 59.508 42.308 5.32 0.00 0.00 3.58
647 706 6.491745 TCTCAGATATCAATAGGAGGTCACAC 59.508 42.308 5.32 0.00 0.00 3.82
648 707 5.241728 TCAGATATCAATAGGAGGTCACACG 59.758 44.000 5.32 0.00 0.00 4.49
649 708 4.524714 AGATATCAATAGGAGGTCACACGG 59.475 45.833 5.32 0.00 0.00 4.94
650 709 1.933021 TCAATAGGAGGTCACACGGT 58.067 50.000 0.00 0.00 0.00 4.83
651 710 3.090210 TCAATAGGAGGTCACACGGTA 57.910 47.619 0.00 0.00 0.00 4.02
652 711 2.756760 TCAATAGGAGGTCACACGGTAC 59.243 50.000 0.00 0.00 0.00 3.34
669 728 3.562505 GGTACGTATGGAGCAGTTATCG 58.437 50.000 0.00 0.00 0.00 2.92
670 729 2.135664 ACGTATGGAGCAGTTATCGC 57.864 50.000 0.00 0.00 0.00 4.58
671 730 1.053048 CGTATGGAGCAGTTATCGCG 58.947 55.000 0.00 0.00 0.00 5.87
672 731 1.419374 GTATGGAGCAGTTATCGCGG 58.581 55.000 6.13 0.00 0.00 6.46
673 732 1.000607 GTATGGAGCAGTTATCGCGGA 60.001 52.381 6.13 0.00 0.00 5.54
674 733 0.464036 ATGGAGCAGTTATCGCGGAA 59.536 50.000 6.13 0.00 0.00 4.30
675 734 0.248012 TGGAGCAGTTATCGCGGAAA 59.752 50.000 6.13 0.00 0.00 3.13
676 735 1.134521 TGGAGCAGTTATCGCGGAAAT 60.135 47.619 6.13 0.00 0.00 2.17
677 736 2.101750 TGGAGCAGTTATCGCGGAAATA 59.898 45.455 6.13 0.00 0.00 1.40
678 737 3.128349 GGAGCAGTTATCGCGGAAATAA 58.872 45.455 6.13 0.00 0.00 1.40
679 738 3.558418 GGAGCAGTTATCGCGGAAATAAA 59.442 43.478 6.13 0.00 0.00 1.40
680 739 4.515432 GAGCAGTTATCGCGGAAATAAAC 58.485 43.478 6.13 2.28 0.00 2.01
681 740 3.311596 AGCAGTTATCGCGGAAATAAACC 59.688 43.478 6.13 0.00 0.00 3.27
682 741 3.311596 GCAGTTATCGCGGAAATAAACCT 59.688 43.478 6.13 0.00 0.00 3.50
683 742 4.201881 GCAGTTATCGCGGAAATAAACCTT 60.202 41.667 6.13 0.00 0.00 3.50
684 743 5.006941 GCAGTTATCGCGGAAATAAACCTTA 59.993 40.000 6.13 0.00 0.00 2.69
685 744 6.646636 CAGTTATCGCGGAAATAAACCTTAG 58.353 40.000 6.13 0.00 0.00 2.18
686 745 6.477688 CAGTTATCGCGGAAATAAACCTTAGA 59.522 38.462 6.13 0.00 0.00 2.10
687 746 6.700520 AGTTATCGCGGAAATAAACCTTAGAG 59.299 38.462 6.13 0.00 0.00 2.43
688 747 3.192466 TCGCGGAAATAAACCTTAGAGC 58.808 45.455 6.13 0.00 0.00 4.09
689 748 3.118884 TCGCGGAAATAAACCTTAGAGCT 60.119 43.478 6.13 0.00 0.00 4.09
690 749 3.621715 CGCGGAAATAAACCTTAGAGCTT 59.378 43.478 0.00 0.00 0.00 3.74
691 750 4.260253 CGCGGAAATAAACCTTAGAGCTTC 60.260 45.833 0.00 0.00 0.00 3.86
692 751 4.876679 GCGGAAATAAACCTTAGAGCTTCT 59.123 41.667 0.00 0.00 0.00 2.85
693 752 5.354513 GCGGAAATAAACCTTAGAGCTTCTT 59.645 40.000 0.00 0.00 0.00 2.52
694 753 6.457122 GCGGAAATAAACCTTAGAGCTTCTTC 60.457 42.308 0.00 0.00 0.00 2.87
695 754 6.037281 CGGAAATAAACCTTAGAGCTTCTTCC 59.963 42.308 0.00 0.00 0.00 3.46
696 755 7.113437 GGAAATAAACCTTAGAGCTTCTTCCT 58.887 38.462 0.00 0.00 0.00 3.36
697 756 7.612244 GGAAATAAACCTTAGAGCTTCTTCCTT 59.388 37.037 0.00 0.00 0.00 3.36
698 757 8.941995 AAATAAACCTTAGAGCTTCTTCCTTT 57.058 30.769 0.00 0.00 0.00 3.11
699 758 8.568676 AATAAACCTTAGAGCTTCTTCCTTTC 57.431 34.615 0.00 0.00 0.00 2.62
700 759 5.568620 AACCTTAGAGCTTCTTCCTTTCA 57.431 39.130 0.00 0.00 0.00 2.69
701 760 5.770685 ACCTTAGAGCTTCTTCCTTTCAT 57.229 39.130 0.00 0.00 0.00 2.57
702 761 6.133253 ACCTTAGAGCTTCTTCCTTTCATT 57.867 37.500 0.00 0.00 0.00 2.57
703 762 5.942826 ACCTTAGAGCTTCTTCCTTTCATTG 59.057 40.000 0.00 0.00 0.00 2.82
704 763 5.942826 CCTTAGAGCTTCTTCCTTTCATTGT 59.057 40.000 0.00 0.00 0.00 2.71
705 764 7.106239 CCTTAGAGCTTCTTCCTTTCATTGTA 58.894 38.462 0.00 0.00 0.00 2.41
706 765 7.772757 CCTTAGAGCTTCTTCCTTTCATTGTAT 59.227 37.037 0.00 0.00 0.00 2.29
707 766 9.171877 CTTAGAGCTTCTTCCTTTCATTGTATT 57.828 33.333 0.00 0.00 0.00 1.89
708 767 9.520515 TTAGAGCTTCTTCCTTTCATTGTATTT 57.479 29.630 0.00 0.00 0.00 1.40
709 768 8.414629 AGAGCTTCTTCCTTTCATTGTATTTT 57.585 30.769 0.00 0.00 0.00 1.82
710 769 8.864087 AGAGCTTCTTCCTTTCATTGTATTTTT 58.136 29.630 0.00 0.00 0.00 1.94
729 788 4.536364 TTTTCTTTTGAGAGTCGTGCTG 57.464 40.909 0.00 0.00 0.00 4.41
730 789 2.890808 TCTTTTGAGAGTCGTGCTGT 57.109 45.000 0.00 0.00 0.00 4.40
731 790 2.473816 TCTTTTGAGAGTCGTGCTGTG 58.526 47.619 0.00 0.00 0.00 3.66
732 791 2.100749 TCTTTTGAGAGTCGTGCTGTGA 59.899 45.455 0.00 0.00 0.00 3.58
733 792 2.595124 TTTGAGAGTCGTGCTGTGAA 57.405 45.000 0.00 0.00 0.00 3.18
734 793 2.820059 TTGAGAGTCGTGCTGTGAAT 57.180 45.000 0.00 0.00 0.00 2.57
735 794 2.820059 TGAGAGTCGTGCTGTGAATT 57.180 45.000 0.00 0.00 0.00 2.17
736 795 3.934457 TGAGAGTCGTGCTGTGAATTA 57.066 42.857 0.00 0.00 0.00 1.40
737 796 4.456280 TGAGAGTCGTGCTGTGAATTAT 57.544 40.909 0.00 0.00 0.00 1.28
738 797 4.176271 TGAGAGTCGTGCTGTGAATTATG 58.824 43.478 0.00 0.00 0.00 1.90
739 798 4.082245 TGAGAGTCGTGCTGTGAATTATGA 60.082 41.667 0.00 0.00 0.00 2.15
740 799 4.820897 AGAGTCGTGCTGTGAATTATGAA 58.179 39.130 0.00 0.00 0.00 2.57
741 800 4.867047 AGAGTCGTGCTGTGAATTATGAAG 59.133 41.667 0.00 0.00 0.00 3.02
742 801 3.372206 AGTCGTGCTGTGAATTATGAAGC 59.628 43.478 0.00 0.00 0.00 3.86
743 802 3.125146 GTCGTGCTGTGAATTATGAAGCA 59.875 43.478 0.00 0.00 41.36 3.91
748 807 6.367686 TGCTGTGAATTATGAAGCACATAG 57.632 37.500 0.00 0.00 41.64 2.23
749 808 5.882000 TGCTGTGAATTATGAAGCACATAGT 59.118 36.000 0.00 0.12 41.64 2.12
750 809 6.375174 TGCTGTGAATTATGAAGCACATAGTT 59.625 34.615 9.91 9.91 41.70 2.24
751 810 7.094248 TGCTGTGAATTATGAAGCACATAGTTT 60.094 33.333 10.91 6.87 40.03 2.66
752 811 8.397906 GCTGTGAATTATGAAGCACATAGTTTA 58.602 33.333 10.91 6.43 40.03 2.01
753 812 9.926751 CTGTGAATTATGAAGCACATAGTTTAG 57.073 33.333 10.91 7.92 40.03 1.85
754 813 8.397906 TGTGAATTATGAAGCACATAGTTTAGC 58.602 33.333 10.91 0.00 40.03 3.09
755 814 7.857885 GTGAATTATGAAGCACATAGTTTAGCC 59.142 37.037 10.91 2.98 40.03 3.93
756 815 7.555914 TGAATTATGAAGCACATAGTTTAGCCA 59.444 33.333 10.91 4.75 40.03 4.75
757 816 7.880160 ATTATGAAGCACATAGTTTAGCCAA 57.120 32.000 4.36 0.00 41.64 4.52
758 817 5.824904 ATGAAGCACATAGTTTAGCCAAG 57.175 39.130 0.00 0.00 37.46 3.61
759 818 4.651778 TGAAGCACATAGTTTAGCCAAGT 58.348 39.130 0.00 0.00 0.00 3.16
760 819 5.070001 TGAAGCACATAGTTTAGCCAAGTT 58.930 37.500 0.00 0.00 0.00 2.66
761 820 5.534654 TGAAGCACATAGTTTAGCCAAGTTT 59.465 36.000 0.00 0.00 0.00 2.66
762 821 6.040391 TGAAGCACATAGTTTAGCCAAGTTTT 59.960 34.615 0.00 0.00 0.00 2.43
763 822 6.405278 AGCACATAGTTTAGCCAAGTTTTT 57.595 33.333 0.00 0.00 0.00 1.94
781 840 2.749340 TTTTTCGAGAGGTCCGGGA 58.251 52.632 0.00 0.00 0.00 5.14
782 841 0.606604 TTTTTCGAGAGGTCCGGGAG 59.393 55.000 0.00 0.00 0.00 4.30
795 854 3.637273 GGGAGGCCACGTCTGGTT 61.637 66.667 5.01 0.00 40.17 3.67
796 855 2.430367 GGAGGCCACGTCTGGTTT 59.570 61.111 5.01 0.00 40.17 3.27
797 856 1.966451 GGAGGCCACGTCTGGTTTG 60.966 63.158 5.01 0.00 40.17 2.93
798 857 1.966451 GAGGCCACGTCTGGTTTGG 60.966 63.158 5.01 0.00 40.17 3.28
800 859 4.025401 GCCACGTCTGGTTTGGCG 62.025 66.667 0.00 0.00 46.11 5.69
801 860 4.025401 CCACGTCTGGTTTGGCGC 62.025 66.667 0.00 0.00 32.03 6.53
802 861 2.972505 CACGTCTGGTTTGGCGCT 60.973 61.111 7.64 0.00 0.00 5.92
803 862 2.665185 ACGTCTGGTTTGGCGCTC 60.665 61.111 7.64 0.00 0.00 5.03
804 863 3.423154 CGTCTGGTTTGGCGCTCC 61.423 66.667 7.64 5.94 0.00 4.70
805 864 2.032681 GTCTGGTTTGGCGCTCCT 59.967 61.111 7.64 0.00 0.00 3.69
806 865 2.035442 GTCTGGTTTGGCGCTCCTC 61.035 63.158 7.64 0.00 0.00 3.71
807 866 2.032528 CTGGTTTGGCGCTCCTCA 59.967 61.111 7.64 0.00 0.00 3.86
808 867 1.377725 CTGGTTTGGCGCTCCTCAT 60.378 57.895 7.64 0.00 0.00 2.90
809 868 1.651240 CTGGTTTGGCGCTCCTCATG 61.651 60.000 7.64 0.00 0.00 3.07
810 869 1.377202 GGTTTGGCGCTCCTCATGA 60.377 57.895 7.64 0.00 0.00 3.07
811 870 1.648467 GGTTTGGCGCTCCTCATGAC 61.648 60.000 7.64 0.00 0.00 3.06
812 871 1.377202 TTTGGCGCTCCTCATGACC 60.377 57.895 7.64 0.00 0.00 4.02
813 872 2.123248 TTTGGCGCTCCTCATGACCA 62.123 55.000 7.64 0.00 0.00 4.02
814 873 2.202987 GGCGCTCCTCATGACCAG 60.203 66.667 7.64 0.00 0.00 4.00
815 874 2.725312 GGCGCTCCTCATGACCAGA 61.725 63.158 7.64 0.00 0.00 3.86
816 875 1.227205 GCGCTCCTCATGACCAGAG 60.227 63.158 0.00 7.87 0.00 3.35
817 876 1.670949 GCGCTCCTCATGACCAGAGA 61.671 60.000 14.12 0.00 35.09 3.10
818 877 1.039068 CGCTCCTCATGACCAGAGAT 58.961 55.000 14.12 0.00 35.09 2.75
819 878 1.269673 CGCTCCTCATGACCAGAGATG 60.270 57.143 14.12 4.70 35.09 2.90
820 879 1.761784 GCTCCTCATGACCAGAGATGT 59.238 52.381 14.12 0.00 35.09 3.06
821 880 2.961741 GCTCCTCATGACCAGAGATGTA 59.038 50.000 14.12 0.00 35.09 2.29
822 881 3.577848 GCTCCTCATGACCAGAGATGTAT 59.422 47.826 14.12 0.00 35.09 2.29
823 882 4.321899 GCTCCTCATGACCAGAGATGTATC 60.322 50.000 14.12 0.00 35.09 2.24
824 883 4.155709 TCCTCATGACCAGAGATGTATCC 58.844 47.826 0.00 0.00 35.09 2.59
825 884 3.260380 CCTCATGACCAGAGATGTATCCC 59.740 52.174 0.00 0.00 35.09 3.85
826 885 3.899980 CTCATGACCAGAGATGTATCCCA 59.100 47.826 0.00 0.00 35.09 4.37
827 886 3.643320 TCATGACCAGAGATGTATCCCAC 59.357 47.826 0.00 0.00 0.00 4.61
828 887 3.404869 TGACCAGAGATGTATCCCACT 57.595 47.619 0.00 0.00 0.00 4.00
829 888 3.300388 TGACCAGAGATGTATCCCACTC 58.700 50.000 0.00 0.00 0.00 3.51
830 889 2.630580 GACCAGAGATGTATCCCACTCC 59.369 54.545 0.00 0.00 0.00 3.85
831 890 2.023015 ACCAGAGATGTATCCCACTCCA 60.023 50.000 0.00 0.00 0.00 3.86
832 891 3.246301 CCAGAGATGTATCCCACTCCAT 58.754 50.000 0.00 0.00 0.00 3.41
833 892 3.007723 CCAGAGATGTATCCCACTCCATG 59.992 52.174 0.00 0.00 0.00 3.66
834 893 3.645212 CAGAGATGTATCCCACTCCATGT 59.355 47.826 0.00 0.00 0.00 3.21
835 894 3.645212 AGAGATGTATCCCACTCCATGTG 59.355 47.826 0.00 0.00 45.80 3.21
845 904 2.346803 CACTCCATGTGGACTTTACGG 58.653 52.381 0.00 0.00 42.68 4.02
846 905 2.028476 CACTCCATGTGGACTTTACGGA 60.028 50.000 0.00 0.00 42.68 4.69
847 906 2.635915 ACTCCATGTGGACTTTACGGAA 59.364 45.455 0.00 0.00 39.78 4.30
848 907 3.263425 ACTCCATGTGGACTTTACGGAAT 59.737 43.478 0.00 0.00 39.78 3.01
849 908 4.468510 ACTCCATGTGGACTTTACGGAATA 59.531 41.667 0.00 0.00 39.78 1.75
850 909 5.046159 ACTCCATGTGGACTTTACGGAATAA 60.046 40.000 0.00 0.00 39.78 1.40
851 910 5.806818 TCCATGTGGACTTTACGGAATAAA 58.193 37.500 0.00 0.00 39.78 1.40
852 911 5.644636 TCCATGTGGACTTTACGGAATAAAC 59.355 40.000 0.00 0.00 39.78 2.01
853 912 5.646360 CCATGTGGACTTTACGGAATAAACT 59.354 40.000 0.00 0.00 37.39 2.66
854 913 6.150474 CCATGTGGACTTTACGGAATAAACTT 59.850 38.462 0.00 0.00 37.39 2.66
855 914 6.548441 TGTGGACTTTACGGAATAAACTTG 57.452 37.500 0.00 0.00 0.00 3.16
856 915 5.470777 TGTGGACTTTACGGAATAAACTTGG 59.529 40.000 0.00 0.00 0.00 3.61
857 916 5.471116 GTGGACTTTACGGAATAAACTTGGT 59.529 40.000 0.00 0.00 0.00 3.67
858 917 6.016860 GTGGACTTTACGGAATAAACTTGGTT 60.017 38.462 0.00 0.00 0.00 3.67
859 918 6.546772 TGGACTTTACGGAATAAACTTGGTTT 59.453 34.615 1.37 1.37 39.24 3.27
860 919 7.068470 TGGACTTTACGGAATAAACTTGGTTTT 59.932 33.333 0.99 0.00 37.01 2.43
861 920 7.922278 GGACTTTACGGAATAAACTTGGTTTTT 59.078 33.333 0.99 0.00 37.01 1.94
862 921 8.861033 ACTTTACGGAATAAACTTGGTTTTTC 57.139 30.769 0.99 5.62 37.01 2.29
863 922 7.922278 ACTTTACGGAATAAACTTGGTTTTTCC 59.078 33.333 9.56 9.56 38.18 3.13
864 923 5.204409 ACGGAATAAACTTGGTTTTTCCC 57.796 39.130 12.64 10.97 38.23 3.97
865 924 4.039488 ACGGAATAAACTTGGTTTTTCCCC 59.961 41.667 12.64 10.23 38.23 4.81
866 925 4.282449 CGGAATAAACTTGGTTTTTCCCCT 59.718 41.667 12.64 0.00 38.23 4.79
867 926 5.477637 CGGAATAAACTTGGTTTTTCCCCTA 59.522 40.000 12.64 0.01 38.23 3.53
868 927 6.015265 CGGAATAAACTTGGTTTTTCCCCTAA 60.015 38.462 12.64 0.00 38.23 2.69
869 928 7.471679 CGGAATAAACTTGGTTTTTCCCCTAAA 60.472 37.037 12.64 0.00 38.23 1.85
870 929 8.212312 GGAATAAACTTGGTTTTTCCCCTAAAA 58.788 33.333 8.73 0.00 37.09 1.52
871 930 9.616156 GAATAAACTTGGTTTTTCCCCTAAAAA 57.384 29.630 0.99 0.00 43.20 1.94
940 1059 2.503824 CTTCCCCTTCCCCTCCTAAAT 58.496 52.381 0.00 0.00 0.00 1.40
941 1060 3.637920 CCTTCCCCTTCCCCTCCTAAATA 60.638 52.174 0.00 0.00 0.00 1.40
942 1061 3.362372 TCCCCTTCCCCTCCTAAATAG 57.638 52.381 0.00 0.00 0.00 1.73
943 1062 2.876221 TCCCCTTCCCCTCCTAAATAGA 59.124 50.000 0.00 0.00 0.00 1.98
944 1063 3.116317 TCCCCTTCCCCTCCTAAATAGAG 60.116 52.174 0.00 0.00 0.00 2.43
945 1064 2.640332 CCCTTCCCCTCCTAAATAGAGC 59.360 54.545 0.00 0.00 0.00 4.09
946 1065 2.300437 CCTTCCCCTCCTAAATAGAGCG 59.700 54.545 0.00 0.00 0.00 5.03
947 1066 2.011122 TCCCCTCCTAAATAGAGCGG 57.989 55.000 0.00 0.00 31.63 5.52
948 1067 0.321996 CCCCTCCTAAATAGAGCGGC 59.678 60.000 0.00 0.00 0.00 6.53
949 1068 0.038159 CCCTCCTAAATAGAGCGGCG 60.038 60.000 0.51 0.51 0.00 6.46
950 1069 0.038159 CCTCCTAAATAGAGCGGCGG 60.038 60.000 9.78 0.00 0.00 6.13
951 1070 0.667792 CTCCTAAATAGAGCGGCGGC 60.668 60.000 9.78 8.43 40.37 6.53
952 1071 2.022129 CCTAAATAGAGCGGCGGCG 61.022 63.158 28.70 28.70 46.35 6.46
953 1072 2.022129 CTAAATAGAGCGGCGGCGG 61.022 63.158 33.02 14.77 46.35 6.13
954 1073 2.694829 CTAAATAGAGCGGCGGCGGT 62.695 60.000 36.38 36.38 46.35 5.68
955 1074 1.454572 TAAATAGAGCGGCGGCGGTA 61.455 55.000 35.87 22.24 46.35 4.02
956 1075 2.694829 AAATAGAGCGGCGGCGGTAG 62.695 60.000 35.87 6.65 46.35 3.18
1026 1145 2.472909 GGCAGGGAATTCGAAGGCG 61.473 63.158 3.35 0.00 39.35 5.52
1214 1333 1.066143 GCTGTCGGAAAAGATCAGGGA 60.066 52.381 0.00 0.00 0.00 4.20
1367 1498 1.269517 GGAGCTGCTCGATCTGTTAGG 60.270 57.143 22.25 0.00 0.00 2.69
1659 1790 1.146263 GAATGAGTACCTGCCCCGG 59.854 63.158 0.00 0.00 0.00 5.73
1799 1930 2.041405 GGAGGAGGTGGAGAGGGG 60.041 72.222 0.00 0.00 0.00 4.79
1888 2019 0.762418 TATATGGGGGCACGACAAGG 59.238 55.000 0.00 0.00 0.00 3.61
1893 2024 1.228154 GGGGCACGACAAGGACTTT 60.228 57.895 0.00 0.00 0.00 2.66
2007 2141 9.203163 GTACCATATAAGTAATCTGGCCTCTAT 57.797 37.037 3.32 0.00 35.66 1.98
2193 2336 0.383231 CCGCATCCCAATTGAAGCTC 59.617 55.000 7.12 0.00 0.00 4.09
2244 2387 6.696411 TCCATTAAAATCTCGGCAACAAAAT 58.304 32.000 0.00 0.00 0.00 1.82
2306 2449 0.248539 GAGATACTGCGGACCGTCAC 60.249 60.000 16.73 0.00 0.00 3.67
2656 2816 2.347490 GCTGGGAGCAACTTCGGA 59.653 61.111 0.00 0.00 41.89 4.55
3369 3535 4.579869 TGGCTCTCTGTTTATGTTCCTTC 58.420 43.478 0.00 0.00 0.00 3.46
3595 3793 1.308216 CTTCCCCCTCCCTGACCAT 60.308 63.158 0.00 0.00 0.00 3.55
3603 3801 2.202987 CCCTGACCATGCTCGCTC 60.203 66.667 0.00 0.00 0.00 5.03
3638 3836 4.021925 ACCTCGCAGCTTCCCCAC 62.022 66.667 0.00 0.00 0.00 4.61
3640 3838 4.379243 CTCGCAGCTTCCCCACGT 62.379 66.667 0.00 0.00 0.00 4.49
3641 3839 4.373116 TCGCAGCTTCCCCACGTC 62.373 66.667 0.00 0.00 0.00 4.34
3784 3983 3.118112 GCTCATCCTTCTTTCTCCATGGA 60.118 47.826 15.27 15.27 0.00 3.41
4031 4230 6.944290 ACACAAATCTGAAATGATTCTGGAGA 59.056 34.615 0.76 0.00 35.82 3.71
4034 4233 7.614583 ACAAATCTGAAATGATTCTGGAGACAT 59.385 33.333 0.76 0.00 36.22 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
135 139 0.250770 GGAAAAAGACCGGCCTCTGT 60.251 55.000 0.00 0.00 0.00 3.41
258 264 2.047655 CCGAAGTGGCGCCTACAA 60.048 61.111 29.70 3.37 0.00 2.41
298 357 3.161450 GCCCGGCCCAGTAGATCA 61.161 66.667 0.00 0.00 0.00 2.92
344 403 4.353437 GTGGTTCGGACGGCGAGT 62.353 66.667 16.62 0.00 0.00 4.18
348 407 3.819877 AACTGGTGGTTCGGACGGC 62.820 63.158 0.00 0.00 31.69 5.68
349 408 1.959226 CAACTGGTGGTTCGGACGG 60.959 63.158 0.00 0.00 35.74 4.79
350 409 1.959226 CCAACTGGTGGTTCGGACG 60.959 63.158 2.79 0.00 43.20 4.79
351 410 4.058797 CCAACTGGTGGTTCGGAC 57.941 61.111 2.79 0.00 43.20 4.79
361 420 1.843368 ATCTTGCACCATCCAACTGG 58.157 50.000 0.00 0.00 42.35 4.00
362 421 2.821378 TGAATCTTGCACCATCCAACTG 59.179 45.455 0.00 0.00 0.00 3.16
363 422 2.821969 GTGAATCTTGCACCATCCAACT 59.178 45.455 0.00 0.00 0.00 3.16
364 423 2.557924 TGTGAATCTTGCACCATCCAAC 59.442 45.455 0.00 0.00 35.43 3.77
365 424 2.874014 TGTGAATCTTGCACCATCCAA 58.126 42.857 0.00 0.00 35.43 3.53
366 425 2.583024 TGTGAATCTTGCACCATCCA 57.417 45.000 0.00 0.00 35.43 3.41
367 426 2.360165 GGATGTGAATCTTGCACCATCC 59.640 50.000 0.00 0.00 37.09 3.51
368 427 3.066342 CAGGATGTGAATCTTGCACCATC 59.934 47.826 0.00 0.00 35.43 3.51
369 428 3.021695 CAGGATGTGAATCTTGCACCAT 58.978 45.455 0.00 0.00 35.43 3.55
370 429 2.439409 CAGGATGTGAATCTTGCACCA 58.561 47.619 0.00 0.00 35.43 4.17
375 434 2.995283 TCCAGCAGGATGTGAATCTTG 58.005 47.619 0.00 0.00 39.61 3.02
387 446 0.395311 ATCTTGCACCATCCAGCAGG 60.395 55.000 0.00 0.00 42.39 4.85
388 447 1.404391 GAATCTTGCACCATCCAGCAG 59.596 52.381 0.00 0.00 42.39 4.24
389 448 1.272037 TGAATCTTGCACCATCCAGCA 60.272 47.619 0.00 0.00 39.32 4.41
390 449 1.466856 TGAATCTTGCACCATCCAGC 58.533 50.000 0.00 0.00 0.00 4.85
391 450 3.021695 ACATGAATCTTGCACCATCCAG 58.978 45.455 0.00 0.00 0.00 3.86
392 451 2.756207 CACATGAATCTTGCACCATCCA 59.244 45.455 0.00 0.00 0.00 3.41
393 452 2.100252 CCACATGAATCTTGCACCATCC 59.900 50.000 0.00 0.00 0.00 3.51
394 453 3.018856 TCCACATGAATCTTGCACCATC 58.981 45.455 0.00 0.00 0.00 3.51
395 454 2.756760 GTCCACATGAATCTTGCACCAT 59.243 45.455 0.00 0.00 0.00 3.55
396 455 2.161855 GTCCACATGAATCTTGCACCA 58.838 47.619 0.00 0.00 0.00 4.17
397 456 2.095059 GTGTCCACATGAATCTTGCACC 60.095 50.000 0.00 0.00 0.00 5.01
398 457 2.095059 GGTGTCCACATGAATCTTGCAC 60.095 50.000 0.00 0.00 0.00 4.57
399 458 2.161855 GGTGTCCACATGAATCTTGCA 58.838 47.619 0.00 0.00 0.00 4.08
400 459 1.131126 CGGTGTCCACATGAATCTTGC 59.869 52.381 0.00 0.00 0.00 4.01
401 460 1.739466 CCGGTGTCCACATGAATCTTG 59.261 52.381 0.00 0.00 0.00 3.02
402 461 1.340017 CCCGGTGTCCACATGAATCTT 60.340 52.381 0.00 0.00 0.00 2.40
403 462 0.253044 CCCGGTGTCCACATGAATCT 59.747 55.000 0.00 0.00 0.00 2.40
404 463 0.748005 CCCCGGTGTCCACATGAATC 60.748 60.000 0.00 0.00 0.00 2.52
405 464 1.302949 CCCCGGTGTCCACATGAAT 59.697 57.895 0.00 0.00 0.00 2.57
406 465 0.836830 TACCCCGGTGTCCACATGAA 60.837 55.000 0.00 0.00 0.00 2.57
407 466 0.836830 TTACCCCGGTGTCCACATGA 60.837 55.000 0.00 0.00 0.00 3.07
408 467 0.254747 ATTACCCCGGTGTCCACATG 59.745 55.000 0.00 0.00 0.00 3.21
409 468 0.254747 CATTACCCCGGTGTCCACAT 59.745 55.000 0.00 0.00 0.00 3.21
410 469 1.680487 CATTACCCCGGTGTCCACA 59.320 57.895 0.00 0.00 0.00 4.17
411 470 1.078001 CCATTACCCCGGTGTCCAC 60.078 63.158 0.00 0.00 0.00 4.02
412 471 0.841158 TTCCATTACCCCGGTGTCCA 60.841 55.000 0.00 0.00 0.00 4.02
413 472 0.328926 TTTCCATTACCCCGGTGTCC 59.671 55.000 0.00 0.00 0.00 4.02
414 473 1.279846 TCTTTCCATTACCCCGGTGTC 59.720 52.381 0.00 0.00 0.00 3.67
415 474 1.364269 TCTTTCCATTACCCCGGTGT 58.636 50.000 0.00 0.00 0.00 4.16
416 475 2.026636 TCTTCTTTCCATTACCCCGGTG 60.027 50.000 0.00 0.00 0.00 4.94
417 476 2.238898 CTCTTCTTTCCATTACCCCGGT 59.761 50.000 0.00 0.00 0.00 5.28
418 477 2.421529 CCTCTTCTTTCCATTACCCCGG 60.422 54.545 0.00 0.00 0.00 5.73
419 478 2.504175 TCCTCTTCTTTCCATTACCCCG 59.496 50.000 0.00 0.00 0.00 5.73
420 479 3.117851 CCTCCTCTTCTTTCCATTACCCC 60.118 52.174 0.00 0.00 0.00 4.95
421 480 3.780850 TCCTCCTCTTCTTTCCATTACCC 59.219 47.826 0.00 0.00 0.00 3.69
422 481 5.368230 AGATCCTCCTCTTCTTTCCATTACC 59.632 44.000 0.00 0.00 0.00 2.85
423 482 6.287525 CAGATCCTCCTCTTCTTTCCATTAC 58.712 44.000 0.00 0.00 0.00 1.89
424 483 5.163258 GCAGATCCTCCTCTTCTTTCCATTA 60.163 44.000 0.00 0.00 0.00 1.90
425 484 4.385088 GCAGATCCTCCTCTTCTTTCCATT 60.385 45.833 0.00 0.00 0.00 3.16
426 485 3.136260 GCAGATCCTCCTCTTCTTTCCAT 59.864 47.826 0.00 0.00 0.00 3.41
427 486 2.503356 GCAGATCCTCCTCTTCTTTCCA 59.497 50.000 0.00 0.00 0.00 3.53
428 487 2.482839 CGCAGATCCTCCTCTTCTTTCC 60.483 54.545 0.00 0.00 0.00 3.13
429 488 2.482839 CCGCAGATCCTCCTCTTCTTTC 60.483 54.545 0.00 0.00 0.00 2.62
430 489 1.484240 CCGCAGATCCTCCTCTTCTTT 59.516 52.381 0.00 0.00 0.00 2.52
431 490 1.118838 CCGCAGATCCTCCTCTTCTT 58.881 55.000 0.00 0.00 0.00 2.52
432 491 1.398958 GCCGCAGATCCTCCTCTTCT 61.399 60.000 0.00 0.00 0.00 2.85
433 492 1.068921 GCCGCAGATCCTCCTCTTC 59.931 63.158 0.00 0.00 0.00 2.87
434 493 1.684386 CTGCCGCAGATCCTCCTCTT 61.684 60.000 15.74 0.00 32.44 2.85
435 494 2.042537 TGCCGCAGATCCTCCTCT 60.043 61.111 0.00 0.00 0.00 3.69
436 495 2.420890 CTGCCGCAGATCCTCCTC 59.579 66.667 15.74 0.00 32.44 3.71
437 496 3.859414 GCTGCCGCAGATCCTCCT 61.859 66.667 24.80 0.00 32.44 3.69
438 497 4.166888 TGCTGCCGCAGATCCTCC 62.167 66.667 24.80 5.54 42.25 4.30
446 505 0.950555 CTCTACAAACTGCTGCCGCA 60.951 55.000 1.88 1.88 45.60 5.69
447 506 0.670546 TCTCTACAAACTGCTGCCGC 60.671 55.000 0.00 0.00 0.00 6.53
448 507 2.015736 ATCTCTACAAACTGCTGCCG 57.984 50.000 0.00 0.00 0.00 5.69
449 508 3.338249 TGAATCTCTACAAACTGCTGCC 58.662 45.455 0.00 0.00 0.00 4.85
450 509 3.181512 GCTGAATCTCTACAAACTGCTGC 60.182 47.826 0.00 0.00 0.00 5.25
451 510 3.373439 GGCTGAATCTCTACAAACTGCTG 59.627 47.826 0.00 0.00 0.00 4.41
452 511 3.604582 GGCTGAATCTCTACAAACTGCT 58.395 45.455 0.00 0.00 0.00 4.24
453 512 2.349886 CGGCTGAATCTCTACAAACTGC 59.650 50.000 0.00 0.00 0.00 4.40
454 513 2.932614 CCGGCTGAATCTCTACAAACTG 59.067 50.000 0.00 0.00 0.00 3.16
455 514 2.832129 TCCGGCTGAATCTCTACAAACT 59.168 45.455 0.00 0.00 0.00 2.66
456 515 3.247006 TCCGGCTGAATCTCTACAAAC 57.753 47.619 0.00 0.00 0.00 2.93
457 516 3.973206 TTCCGGCTGAATCTCTACAAA 57.027 42.857 0.00 0.00 0.00 2.83
458 517 3.260884 AGTTTCCGGCTGAATCTCTACAA 59.739 43.478 0.00 0.00 28.86 2.41
459 518 2.832129 AGTTTCCGGCTGAATCTCTACA 59.168 45.455 0.00 0.00 28.86 2.74
460 519 3.528597 AGTTTCCGGCTGAATCTCTAC 57.471 47.619 0.00 0.00 28.86 2.59
461 520 4.021229 TGTAGTTTCCGGCTGAATCTCTA 58.979 43.478 0.00 1.58 35.25 2.43
462 521 2.832129 TGTAGTTTCCGGCTGAATCTCT 59.168 45.455 0.00 2.37 35.25 3.10
463 522 3.247006 TGTAGTTTCCGGCTGAATCTC 57.753 47.619 0.00 0.88 35.25 2.75
464 523 3.535561 CATGTAGTTTCCGGCTGAATCT 58.464 45.455 0.00 7.30 36.98 2.40
465 524 2.614057 CCATGTAGTTTCCGGCTGAATC 59.386 50.000 0.00 0.00 31.67 2.52
466 525 2.643551 CCATGTAGTTTCCGGCTGAAT 58.356 47.619 0.00 0.00 31.67 2.57
467 526 1.339631 CCCATGTAGTTTCCGGCTGAA 60.340 52.381 0.00 0.00 0.00 3.02
468 527 0.251916 CCCATGTAGTTTCCGGCTGA 59.748 55.000 0.00 0.00 0.00 4.26
469 528 1.376609 GCCCATGTAGTTTCCGGCTG 61.377 60.000 0.00 0.00 33.50 4.85
470 529 1.077716 GCCCATGTAGTTTCCGGCT 60.078 57.895 0.00 0.00 33.50 5.52
471 530 1.376609 CTGCCCATGTAGTTTCCGGC 61.377 60.000 0.00 0.00 36.91 6.13
472 531 1.376609 GCTGCCCATGTAGTTTCCGG 61.377 60.000 0.00 0.00 0.00 5.14
473 532 0.392998 AGCTGCCCATGTAGTTTCCG 60.393 55.000 0.00 0.00 0.00 4.30
474 533 1.383523 GAGCTGCCCATGTAGTTTCC 58.616 55.000 0.00 0.00 0.00 3.13
475 534 1.009829 CGAGCTGCCCATGTAGTTTC 58.990 55.000 0.00 0.00 0.00 2.78
476 535 0.392998 CCGAGCTGCCCATGTAGTTT 60.393 55.000 0.00 0.00 0.00 2.66
477 536 1.221840 CCGAGCTGCCCATGTAGTT 59.778 57.895 0.00 0.00 0.00 2.24
478 537 2.903357 CCGAGCTGCCCATGTAGT 59.097 61.111 0.00 0.00 0.00 2.73
479 538 2.590007 GCCGAGCTGCCCATGTAG 60.590 66.667 0.00 0.00 0.00 2.74
480 539 4.175337 GGCCGAGCTGCCCATGTA 62.175 66.667 3.64 0.00 46.11 2.29
487 546 4.537433 CCACTAGGGCCGAGCTGC 62.537 72.222 14.10 0.00 0.00 5.25
488 547 3.077556 ACCACTAGGGCCGAGCTG 61.078 66.667 14.10 10.75 42.05 4.24
489 548 2.760385 GACCACTAGGGCCGAGCT 60.760 66.667 14.10 0.00 42.05 4.09
490 549 4.208686 CGACCACTAGGGCCGAGC 62.209 72.222 14.10 0.00 41.31 5.03
491 550 2.439701 TCGACCACTAGGGCCGAG 60.440 66.667 12.54 12.54 41.31 4.63
492 551 2.439701 CTCGACCACTAGGGCCGA 60.440 66.667 0.00 8.04 41.31 5.54
493 552 3.528370 CCTCGACCACTAGGGCCG 61.528 72.222 0.00 0.00 41.31 6.13
494 553 3.155167 CCCTCGACCACTAGGGCC 61.155 72.222 0.00 0.00 45.91 5.80
497 556 1.038130 CCACTCCCTCGACCACTAGG 61.038 65.000 0.00 0.00 42.21 3.02
498 557 0.034380 TCCACTCCCTCGACCACTAG 60.034 60.000 0.00 0.00 0.00 2.57
499 558 0.406750 TTCCACTCCCTCGACCACTA 59.593 55.000 0.00 0.00 0.00 2.74
500 559 0.900647 CTTCCACTCCCTCGACCACT 60.901 60.000 0.00 0.00 0.00 4.00
501 560 0.898789 TCTTCCACTCCCTCGACCAC 60.899 60.000 0.00 0.00 0.00 4.16
502 561 0.041238 ATCTTCCACTCCCTCGACCA 59.959 55.000 0.00 0.00 0.00 4.02
503 562 1.137282 GAATCTTCCACTCCCTCGACC 59.863 57.143 0.00 0.00 0.00 4.79
504 563 1.202313 CGAATCTTCCACTCCCTCGAC 60.202 57.143 0.00 0.00 0.00 4.20
505 564 1.103803 CGAATCTTCCACTCCCTCGA 58.896 55.000 0.00 0.00 0.00 4.04
506 565 0.103208 CCGAATCTTCCACTCCCTCG 59.897 60.000 0.00 0.00 0.00 4.63
507 566 0.179070 GCCGAATCTTCCACTCCCTC 60.179 60.000 0.00 0.00 0.00 4.30
508 567 1.908483 GCCGAATCTTCCACTCCCT 59.092 57.895 0.00 0.00 0.00 4.20
509 568 1.521681 CGCCGAATCTTCCACTCCC 60.522 63.158 0.00 0.00 0.00 4.30
510 569 0.806492 GTCGCCGAATCTTCCACTCC 60.806 60.000 0.00 0.00 0.00 3.85
511 570 0.108804 TGTCGCCGAATCTTCCACTC 60.109 55.000 0.00 0.00 0.00 3.51
512 571 0.389948 GTGTCGCCGAATCTTCCACT 60.390 55.000 0.00 0.00 0.00 4.00
513 572 0.389948 AGTGTCGCCGAATCTTCCAC 60.390 55.000 0.00 0.00 0.00 4.02
514 573 0.320374 AAGTGTCGCCGAATCTTCCA 59.680 50.000 0.00 0.00 0.00 3.53
515 574 2.288961 TAAGTGTCGCCGAATCTTCC 57.711 50.000 8.01 0.00 0.00 3.46
516 575 3.483738 GCTTTAAGTGTCGCCGAATCTTC 60.484 47.826 8.01 0.00 0.00 2.87
517 576 2.415512 GCTTTAAGTGTCGCCGAATCTT 59.584 45.455 9.34 9.34 0.00 2.40
518 577 2.000447 GCTTTAAGTGTCGCCGAATCT 59.000 47.619 0.00 0.00 0.00 2.40
519 578 2.000447 AGCTTTAAGTGTCGCCGAATC 59.000 47.619 0.00 0.00 0.00 2.52
520 579 2.000447 GAGCTTTAAGTGTCGCCGAAT 59.000 47.619 0.00 0.00 0.00 3.34
521 580 1.000506 AGAGCTTTAAGTGTCGCCGAA 59.999 47.619 0.00 0.00 0.00 4.30
522 581 0.601558 AGAGCTTTAAGTGTCGCCGA 59.398 50.000 0.00 0.00 0.00 5.54
523 582 1.126846 CAAGAGCTTTAAGTGTCGCCG 59.873 52.381 0.00 0.00 0.00 6.46
524 583 1.135944 GCAAGAGCTTTAAGTGTCGCC 60.136 52.381 0.00 0.00 37.91 5.54
525 584 2.233738 GCAAGAGCTTTAAGTGTCGC 57.766 50.000 0.00 0.00 37.91 5.19
537 596 1.743252 CCTCCCGACAAGCAAGAGC 60.743 63.158 0.00 0.00 42.56 4.09
538 597 1.743252 GCCTCCCGACAAGCAAGAG 60.743 63.158 0.00 0.00 0.00 2.85
539 598 2.347490 GCCTCCCGACAAGCAAGA 59.653 61.111 0.00 0.00 0.00 3.02
540 599 3.121030 CGCCTCCCGACAAGCAAG 61.121 66.667 0.00 0.00 40.02 4.01
541 600 2.102109 TAACGCCTCCCGACAAGCAA 62.102 55.000 0.00 0.00 41.02 3.91
542 601 1.895020 ATAACGCCTCCCGACAAGCA 61.895 55.000 0.00 0.00 41.02 3.91
543 602 1.152383 GATAACGCCTCCCGACAAGC 61.152 60.000 0.00 0.00 41.02 4.01
544 603 0.529992 GGATAACGCCTCCCGACAAG 60.530 60.000 0.00 0.00 41.02 3.16
545 604 1.518774 GGATAACGCCTCCCGACAA 59.481 57.895 0.00 0.00 41.02 3.18
546 605 2.428925 GGGATAACGCCTCCCGACA 61.429 63.158 2.12 0.00 42.94 4.35
547 606 2.420466 GGGATAACGCCTCCCGAC 59.580 66.667 2.12 0.00 42.94 4.79
551 610 0.815615 CTGCAAGGGATAACGCCTCC 60.816 60.000 0.00 0.00 0.00 4.30
552 611 0.178068 TCTGCAAGGGATAACGCCTC 59.822 55.000 0.00 0.00 0.00 4.70
553 612 0.618458 TTCTGCAAGGGATAACGCCT 59.382 50.000 0.00 0.00 0.00 5.52
554 613 1.017387 CTTCTGCAAGGGATAACGCC 58.983 55.000 0.00 0.00 0.00 5.68
555 614 2.024176 TCTTCTGCAAGGGATAACGC 57.976 50.000 0.00 0.00 0.00 4.84
556 615 4.692625 CCATATCTTCTGCAAGGGATAACG 59.307 45.833 6.36 0.00 34.63 3.18
557 616 5.006386 CCCATATCTTCTGCAAGGGATAAC 58.994 45.833 0.00 0.00 36.96 1.89
558 617 4.665009 ACCCATATCTTCTGCAAGGGATAA 59.335 41.667 0.00 0.00 38.21 1.75
559 618 4.242811 ACCCATATCTTCTGCAAGGGATA 58.757 43.478 0.00 0.00 38.21 2.59
560 619 3.059097 ACCCATATCTTCTGCAAGGGAT 58.941 45.455 0.00 0.00 38.21 3.85
561 620 2.492025 ACCCATATCTTCTGCAAGGGA 58.508 47.619 0.00 0.00 38.21 4.20
562 621 4.566488 GGATACCCATATCTTCTGCAAGGG 60.566 50.000 0.00 0.00 37.85 3.95
563 622 4.042062 TGGATACCCATATCTTCTGCAAGG 59.958 45.833 0.00 0.00 37.58 3.61
564 623 5.012458 TCTGGATACCCATATCTTCTGCAAG 59.988 44.000 0.00 0.00 42.59 4.01
565 624 4.907269 TCTGGATACCCATATCTTCTGCAA 59.093 41.667 0.00 0.00 42.59 4.08
566 625 4.492646 TCTGGATACCCATATCTTCTGCA 58.507 43.478 0.00 0.00 42.59 4.41
567 626 5.012561 AGTTCTGGATACCCATATCTTCTGC 59.987 44.000 0.00 0.00 42.59 4.26
568 627 6.678568 AGTTCTGGATACCCATATCTTCTG 57.321 41.667 0.00 0.00 42.59 3.02
569 628 7.127955 ACAAAGTTCTGGATACCCATATCTTCT 59.872 37.037 0.00 0.00 42.59 2.85
570 629 7.283329 ACAAAGTTCTGGATACCCATATCTTC 58.717 38.462 0.00 0.00 42.59 2.87
571 630 7.213178 ACAAAGTTCTGGATACCCATATCTT 57.787 36.000 0.00 0.00 42.59 2.40
572 631 6.831664 ACAAAGTTCTGGATACCCATATCT 57.168 37.500 0.00 0.00 42.59 1.98
573 632 9.574516 AATAACAAAGTTCTGGATACCCATATC 57.425 33.333 0.00 0.00 42.59 1.63
574 633 9.354673 CAATAACAAAGTTCTGGATACCCATAT 57.645 33.333 0.00 0.00 42.59 1.78
575 634 7.284489 GCAATAACAAAGTTCTGGATACCCATA 59.716 37.037 0.00 0.00 42.59 2.74
576 635 6.096846 GCAATAACAAAGTTCTGGATACCCAT 59.903 38.462 0.00 0.00 42.59 4.00
577 636 5.417580 GCAATAACAAAGTTCTGGATACCCA 59.582 40.000 0.00 0.00 40.95 4.51
578 637 5.163550 GGCAATAACAAAGTTCTGGATACCC 60.164 44.000 0.00 0.00 0.00 3.69
579 638 5.652452 AGGCAATAACAAAGTTCTGGATACC 59.348 40.000 0.00 0.00 0.00 2.73
580 639 6.456988 CGAGGCAATAACAAAGTTCTGGATAC 60.457 42.308 0.00 0.00 0.00 2.24
581 640 5.584649 CGAGGCAATAACAAAGTTCTGGATA 59.415 40.000 0.00 0.00 0.00 2.59
582 641 4.396166 CGAGGCAATAACAAAGTTCTGGAT 59.604 41.667 0.00 0.00 0.00 3.41
583 642 3.751175 CGAGGCAATAACAAAGTTCTGGA 59.249 43.478 0.00 0.00 0.00 3.86
584 643 3.119849 CCGAGGCAATAACAAAGTTCTGG 60.120 47.826 0.00 0.00 0.00 3.86
585 644 3.751175 TCCGAGGCAATAACAAAGTTCTG 59.249 43.478 0.00 0.00 0.00 3.02
586 645 3.751698 GTCCGAGGCAATAACAAAGTTCT 59.248 43.478 0.00 0.00 0.00 3.01
587 646 3.751698 AGTCCGAGGCAATAACAAAGTTC 59.248 43.478 0.00 0.00 0.00 3.01
588 647 3.502211 CAGTCCGAGGCAATAACAAAGTT 59.498 43.478 0.00 0.00 0.00 2.66
589 648 3.074412 CAGTCCGAGGCAATAACAAAGT 58.926 45.455 0.00 0.00 0.00 2.66
590 649 2.159517 GCAGTCCGAGGCAATAACAAAG 60.160 50.000 0.00 0.00 0.00 2.77
591 650 1.810151 GCAGTCCGAGGCAATAACAAA 59.190 47.619 0.00 0.00 0.00 2.83
592 651 1.448985 GCAGTCCGAGGCAATAACAA 58.551 50.000 0.00 0.00 0.00 2.83
593 652 0.392461 GGCAGTCCGAGGCAATAACA 60.392 55.000 0.00 0.00 0.00 2.41
594 653 0.392461 TGGCAGTCCGAGGCAATAAC 60.392 55.000 0.00 0.00 38.71 1.89
595 654 0.107703 CTGGCAGTCCGAGGCAATAA 60.108 55.000 6.28 0.00 41.25 1.40
596 655 1.522092 CTGGCAGTCCGAGGCAATA 59.478 57.895 6.28 0.00 41.25 1.90
597 656 2.270205 CTGGCAGTCCGAGGCAAT 59.730 61.111 6.28 0.00 41.25 3.56
598 657 4.704833 GCTGGCAGTCCGAGGCAA 62.705 66.667 17.16 0.00 41.25 4.52
600 659 4.704833 TTGCTGGCAGTCCGAGGC 62.705 66.667 17.16 0.46 34.14 4.70
601 660 2.435586 CTTGCTGGCAGTCCGAGG 60.436 66.667 17.16 0.00 34.14 4.63
602 661 1.739562 GACTTGCTGGCAGTCCGAG 60.740 63.158 17.16 11.64 34.14 4.63
603 662 2.343758 GACTTGCTGGCAGTCCGA 59.656 61.111 17.16 0.00 34.14 4.55
604 663 3.114616 CGACTTGCTGGCAGTCCG 61.115 66.667 17.16 8.77 34.14 4.79
605 664 2.029844 GACGACTTGCTGGCAGTCC 61.030 63.158 17.16 0.20 0.00 3.85
606 665 1.005630 AGACGACTTGCTGGCAGTC 60.006 57.895 17.16 9.10 0.00 3.51
607 666 1.005630 GAGACGACTTGCTGGCAGT 60.006 57.895 17.16 0.00 0.00 4.40
608 667 1.005748 TGAGACGACTTGCTGGCAG 60.006 57.895 10.94 10.94 0.00 4.85
609 668 1.005748 CTGAGACGACTTGCTGGCA 60.006 57.895 0.00 0.00 0.00 4.92
610 669 0.108424 ATCTGAGACGACTTGCTGGC 60.108 55.000 0.00 0.00 0.00 4.85
611 670 3.067320 TGATATCTGAGACGACTTGCTGG 59.933 47.826 3.98 0.00 0.00 4.85
612 671 4.298744 TGATATCTGAGACGACTTGCTG 57.701 45.455 3.98 0.00 0.00 4.41
613 672 4.991153 TTGATATCTGAGACGACTTGCT 57.009 40.909 3.98 0.00 0.00 3.91
614 673 5.861251 CCTATTGATATCTGAGACGACTTGC 59.139 44.000 3.98 0.00 0.00 4.01
615 674 7.208225 TCCTATTGATATCTGAGACGACTTG 57.792 40.000 3.98 0.00 0.00 3.16
616 675 6.432783 CCTCCTATTGATATCTGAGACGACTT 59.567 42.308 3.98 0.00 0.00 3.01
617 676 5.943416 CCTCCTATTGATATCTGAGACGACT 59.057 44.000 3.98 0.00 0.00 4.18
618 677 5.708230 ACCTCCTATTGATATCTGAGACGAC 59.292 44.000 3.98 0.00 0.00 4.34
619 678 5.882040 ACCTCCTATTGATATCTGAGACGA 58.118 41.667 3.98 0.00 0.00 4.20
620 679 5.707764 TGACCTCCTATTGATATCTGAGACG 59.292 44.000 3.98 0.00 0.00 4.18
621 680 6.491745 TGTGACCTCCTATTGATATCTGAGAC 59.508 42.308 3.98 0.00 0.00 3.36
622 681 6.491745 GTGTGACCTCCTATTGATATCTGAGA 59.508 42.308 3.98 0.00 0.00 3.27
623 682 6.569418 CGTGTGACCTCCTATTGATATCTGAG 60.569 46.154 3.98 2.77 0.00 3.35
624 683 5.241728 CGTGTGACCTCCTATTGATATCTGA 59.758 44.000 3.98 0.00 0.00 3.27
625 684 5.465051 CGTGTGACCTCCTATTGATATCTG 58.535 45.833 3.98 0.00 0.00 2.90
626 685 4.524714 CCGTGTGACCTCCTATTGATATCT 59.475 45.833 3.98 0.00 0.00 1.98
627 686 4.281182 ACCGTGTGACCTCCTATTGATATC 59.719 45.833 0.00 0.00 0.00 1.63
628 687 4.223953 ACCGTGTGACCTCCTATTGATAT 58.776 43.478 0.00 0.00 0.00 1.63
629 688 3.638860 ACCGTGTGACCTCCTATTGATA 58.361 45.455 0.00 0.00 0.00 2.15
630 689 2.467880 ACCGTGTGACCTCCTATTGAT 58.532 47.619 0.00 0.00 0.00 2.57
631 690 1.933021 ACCGTGTGACCTCCTATTGA 58.067 50.000 0.00 0.00 0.00 2.57
632 691 2.479049 CGTACCGTGTGACCTCCTATTG 60.479 54.545 0.00 0.00 0.00 1.90
633 692 1.747355 CGTACCGTGTGACCTCCTATT 59.253 52.381 0.00 0.00 0.00 1.73
634 693 1.340405 ACGTACCGTGTGACCTCCTAT 60.340 52.381 0.00 0.00 39.18 2.57
635 694 0.036732 ACGTACCGTGTGACCTCCTA 59.963 55.000 0.00 0.00 39.18 2.94
636 695 0.036732 TACGTACCGTGTGACCTCCT 59.963 55.000 0.00 0.00 41.39 3.69
637 696 1.098050 ATACGTACCGTGTGACCTCC 58.902 55.000 0.00 0.00 41.39 4.30
643 702 0.171679 TGCTCCATACGTACCGTGTG 59.828 55.000 0.00 6.55 45.77 3.82
644 703 0.454600 CTGCTCCATACGTACCGTGT 59.545 55.000 0.00 0.00 41.39 4.49
645 704 0.454600 ACTGCTCCATACGTACCGTG 59.545 55.000 0.00 0.00 41.39 4.94
646 705 1.180029 AACTGCTCCATACGTACCGT 58.820 50.000 0.00 0.00 44.35 4.83
647 706 3.562505 GATAACTGCTCCATACGTACCG 58.437 50.000 0.00 0.00 0.00 4.02
648 707 3.562505 CGATAACTGCTCCATACGTACC 58.437 50.000 0.00 0.00 0.00 3.34
649 708 2.978489 GCGATAACTGCTCCATACGTAC 59.022 50.000 0.00 0.00 0.00 3.67
650 709 2.350102 CGCGATAACTGCTCCATACGTA 60.350 50.000 0.00 0.00 0.00 3.57
651 710 1.599667 CGCGATAACTGCTCCATACGT 60.600 52.381 0.00 0.00 0.00 3.57
652 711 1.053048 CGCGATAACTGCTCCATACG 58.947 55.000 0.00 0.00 0.00 3.06
653 712 1.000607 TCCGCGATAACTGCTCCATAC 60.001 52.381 8.23 0.00 0.00 2.39
654 713 1.324383 TCCGCGATAACTGCTCCATA 58.676 50.000 8.23 0.00 0.00 2.74
655 714 0.464036 TTCCGCGATAACTGCTCCAT 59.536 50.000 8.23 0.00 0.00 3.41
656 715 0.248012 TTTCCGCGATAACTGCTCCA 59.752 50.000 8.23 0.00 0.00 3.86
657 716 1.583054 ATTTCCGCGATAACTGCTCC 58.417 50.000 8.23 0.00 0.00 4.70
658 717 4.515432 GTTTATTTCCGCGATAACTGCTC 58.485 43.478 8.23 0.00 0.00 4.26
659 718 3.311596 GGTTTATTTCCGCGATAACTGCT 59.688 43.478 8.23 0.00 0.00 4.24
660 719 3.311596 AGGTTTATTTCCGCGATAACTGC 59.688 43.478 8.23 0.00 0.00 4.40
661 720 5.479716 AAGGTTTATTTCCGCGATAACTG 57.520 39.130 8.23 0.00 0.00 3.16
662 721 6.576185 TCTAAGGTTTATTTCCGCGATAACT 58.424 36.000 8.23 0.00 0.00 2.24
663 722 6.563567 GCTCTAAGGTTTATTTCCGCGATAAC 60.564 42.308 8.23 2.10 0.00 1.89
664 723 5.464389 GCTCTAAGGTTTATTTCCGCGATAA 59.536 40.000 8.23 0.24 0.00 1.75
665 724 4.986659 GCTCTAAGGTTTATTTCCGCGATA 59.013 41.667 8.23 0.00 0.00 2.92
666 725 3.808174 GCTCTAAGGTTTATTTCCGCGAT 59.192 43.478 8.23 0.00 0.00 4.58
667 726 3.118884 AGCTCTAAGGTTTATTTCCGCGA 60.119 43.478 8.23 0.00 0.00 5.87
668 727 3.195661 AGCTCTAAGGTTTATTTCCGCG 58.804 45.455 0.00 0.00 0.00 6.46
669 728 4.876679 AGAAGCTCTAAGGTTTATTTCCGC 59.123 41.667 0.00 0.00 35.86 5.54
670 729 6.037281 GGAAGAAGCTCTAAGGTTTATTTCCG 59.963 42.308 11.45 0.00 35.86 4.30
671 730 7.113437 AGGAAGAAGCTCTAAGGTTTATTTCC 58.887 38.462 15.43 15.43 39.06 3.13
672 731 8.568676 AAGGAAGAAGCTCTAAGGTTTATTTC 57.431 34.615 0.00 0.00 35.86 2.17
673 732 8.941995 AAAGGAAGAAGCTCTAAGGTTTATTT 57.058 30.769 0.00 0.00 35.86 1.40
674 733 8.164070 TGAAAGGAAGAAGCTCTAAGGTTTATT 58.836 33.333 0.00 0.00 35.86 1.40
675 734 7.690256 TGAAAGGAAGAAGCTCTAAGGTTTAT 58.310 34.615 0.00 0.00 35.86 1.40
676 735 7.074653 TGAAAGGAAGAAGCTCTAAGGTTTA 57.925 36.000 0.00 0.00 35.86 2.01
677 736 5.941788 TGAAAGGAAGAAGCTCTAAGGTTT 58.058 37.500 0.00 0.00 35.86 3.27
678 737 5.568620 TGAAAGGAAGAAGCTCTAAGGTT 57.431 39.130 0.00 0.00 38.85 3.50
679 738 5.770685 ATGAAAGGAAGAAGCTCTAAGGT 57.229 39.130 0.00 0.00 0.00 3.50
680 739 5.942826 ACAATGAAAGGAAGAAGCTCTAAGG 59.057 40.000 0.00 0.00 0.00 2.69
681 740 8.729805 ATACAATGAAAGGAAGAAGCTCTAAG 57.270 34.615 0.00 0.00 0.00 2.18
682 741 9.520515 AAATACAATGAAAGGAAGAAGCTCTAA 57.479 29.630 0.00 0.00 0.00 2.10
683 742 9.520515 AAAATACAATGAAAGGAAGAAGCTCTA 57.479 29.630 0.00 0.00 0.00 2.43
684 743 8.414629 AAAATACAATGAAAGGAAGAAGCTCT 57.585 30.769 0.00 0.00 0.00 4.09
707 766 4.394920 ACAGCACGACTCTCAAAAGAAAAA 59.605 37.500 0.00 0.00 0.00 1.94
708 767 3.938963 ACAGCACGACTCTCAAAAGAAAA 59.061 39.130 0.00 0.00 0.00 2.29
709 768 3.309682 CACAGCACGACTCTCAAAAGAAA 59.690 43.478 0.00 0.00 0.00 2.52
710 769 2.866156 CACAGCACGACTCTCAAAAGAA 59.134 45.455 0.00 0.00 0.00 2.52
711 770 2.100749 TCACAGCACGACTCTCAAAAGA 59.899 45.455 0.00 0.00 0.00 2.52
712 771 2.473816 TCACAGCACGACTCTCAAAAG 58.526 47.619 0.00 0.00 0.00 2.27
713 772 2.595124 TCACAGCACGACTCTCAAAA 57.405 45.000 0.00 0.00 0.00 2.44
714 773 2.595124 TTCACAGCACGACTCTCAAA 57.405 45.000 0.00 0.00 0.00 2.69
715 774 2.820059 ATTCACAGCACGACTCTCAA 57.180 45.000 0.00 0.00 0.00 3.02
716 775 2.820059 AATTCACAGCACGACTCTCA 57.180 45.000 0.00 0.00 0.00 3.27
717 776 4.424626 TCATAATTCACAGCACGACTCTC 58.575 43.478 0.00 0.00 0.00 3.20
718 777 4.456280 TCATAATTCACAGCACGACTCT 57.544 40.909 0.00 0.00 0.00 3.24
719 778 4.493220 GCTTCATAATTCACAGCACGACTC 60.493 45.833 0.00 0.00 0.00 3.36
720 779 3.372206 GCTTCATAATTCACAGCACGACT 59.628 43.478 0.00 0.00 0.00 4.18
721 780 3.125146 TGCTTCATAATTCACAGCACGAC 59.875 43.478 0.00 0.00 35.56 4.34
722 781 3.333804 TGCTTCATAATTCACAGCACGA 58.666 40.909 0.00 0.00 35.56 4.35
723 782 3.745332 TGCTTCATAATTCACAGCACG 57.255 42.857 0.00 0.00 35.56 5.34
725 784 5.882000 ACTATGTGCTTCATAATTCACAGCA 59.118 36.000 0.00 0.00 41.90 4.41
726 785 6.369059 ACTATGTGCTTCATAATTCACAGC 57.631 37.500 0.00 0.00 41.90 4.40
727 786 9.926751 CTAAACTATGTGCTTCATAATTCACAG 57.073 33.333 0.00 0.00 41.90 3.66
728 787 8.397906 GCTAAACTATGTGCTTCATAATTCACA 58.602 33.333 0.00 0.00 42.66 3.58
729 788 7.857885 GGCTAAACTATGTGCTTCATAATTCAC 59.142 37.037 4.37 0.00 38.38 3.18
730 789 7.555914 TGGCTAAACTATGTGCTTCATAATTCA 59.444 33.333 4.37 0.00 38.38 2.57
731 790 7.930217 TGGCTAAACTATGTGCTTCATAATTC 58.070 34.615 4.37 0.00 38.38 2.17
732 791 7.880160 TGGCTAAACTATGTGCTTCATAATT 57.120 32.000 4.37 0.00 38.38 1.40
733 792 7.557719 ACTTGGCTAAACTATGTGCTTCATAAT 59.442 33.333 4.37 0.00 38.38 1.28
734 793 6.884295 ACTTGGCTAAACTATGTGCTTCATAA 59.116 34.615 4.37 0.00 38.38 1.90
735 794 6.414732 ACTTGGCTAAACTATGTGCTTCATA 58.585 36.000 0.00 0.00 37.91 2.15
736 795 5.256474 ACTTGGCTAAACTATGTGCTTCAT 58.744 37.500 0.00 0.00 40.25 2.57
737 796 4.651778 ACTTGGCTAAACTATGTGCTTCA 58.348 39.130 0.00 0.00 0.00 3.02
738 797 5.629079 AACTTGGCTAAACTATGTGCTTC 57.371 39.130 0.00 0.00 0.00 3.86
739 798 6.405278 AAAACTTGGCTAAACTATGTGCTT 57.595 33.333 0.00 0.00 0.00 3.91
740 799 6.405278 AAAAACTTGGCTAAACTATGTGCT 57.595 33.333 0.00 0.00 0.00 4.40
763 822 0.606604 CTCCCGGACCTCTCGAAAAA 59.393 55.000 0.73 0.00 0.00 1.94
764 823 1.255667 CCTCCCGGACCTCTCGAAAA 61.256 60.000 0.73 0.00 0.00 2.29
765 824 1.681327 CCTCCCGGACCTCTCGAAA 60.681 63.158 0.73 0.00 0.00 3.46
766 825 2.044252 CCTCCCGGACCTCTCGAA 60.044 66.667 0.73 0.00 0.00 3.71
767 826 4.816984 GCCTCCCGGACCTCTCGA 62.817 72.222 0.73 0.00 0.00 4.04
769 828 4.779733 TGGCCTCCCGGACCTCTC 62.780 72.222 0.73 0.00 37.62 3.20
785 844 2.954753 GAGCGCCAAACCAGACGTG 61.955 63.158 2.29 0.00 0.00 4.49
786 845 2.665185 GAGCGCCAAACCAGACGT 60.665 61.111 2.29 0.00 0.00 4.34
787 846 3.423154 GGAGCGCCAAACCAGACG 61.423 66.667 2.29 0.00 0.00 4.18
788 847 2.032681 AGGAGCGCCAAACCAGAC 59.967 61.111 9.88 0.00 36.29 3.51
789 848 1.841302 ATGAGGAGCGCCAAACCAGA 61.841 55.000 9.88 0.00 36.29 3.86
790 849 1.377725 ATGAGGAGCGCCAAACCAG 60.378 57.895 9.88 0.00 36.29 4.00
791 850 1.675310 CATGAGGAGCGCCAAACCA 60.675 57.895 9.88 1.15 36.29 3.67
792 851 1.377202 TCATGAGGAGCGCCAAACC 60.377 57.895 9.88 2.72 36.29 3.27
793 852 1.648467 GGTCATGAGGAGCGCCAAAC 61.648 60.000 9.88 0.03 36.29 2.93
794 853 1.377202 GGTCATGAGGAGCGCCAAA 60.377 57.895 9.88 0.00 36.29 3.28
795 854 2.268920 GGTCATGAGGAGCGCCAA 59.731 61.111 9.88 0.00 36.29 4.52
800 859 1.761784 ACATCTCTGGTCATGAGGAGC 59.238 52.381 0.00 0.00 44.35 4.70
801 860 4.220382 GGATACATCTCTGGTCATGAGGAG 59.780 50.000 0.00 4.83 32.78 3.69
802 861 4.155709 GGATACATCTCTGGTCATGAGGA 58.844 47.826 0.00 0.00 32.78 3.71
803 862 3.260380 GGGATACATCTCTGGTCATGAGG 59.740 52.174 0.00 0.00 39.74 3.86
804 863 3.899980 TGGGATACATCTCTGGTCATGAG 59.100 47.826 0.00 0.00 39.74 2.90
805 864 3.643320 GTGGGATACATCTCTGGTCATGA 59.357 47.826 0.00 0.00 39.74 3.07
806 865 3.645212 AGTGGGATACATCTCTGGTCATG 59.355 47.826 0.00 0.00 39.74 3.07
807 866 3.900601 GAGTGGGATACATCTCTGGTCAT 59.099 47.826 0.00 0.00 35.77 3.06
808 867 3.300388 GAGTGGGATACATCTCTGGTCA 58.700 50.000 0.00 0.00 35.77 4.02
809 868 2.630580 GGAGTGGGATACATCTCTGGTC 59.369 54.545 0.00 0.00 37.76 4.02
810 869 2.023015 TGGAGTGGGATACATCTCTGGT 60.023 50.000 0.00 0.00 37.76 4.00
811 870 2.682594 TGGAGTGGGATACATCTCTGG 58.317 52.381 0.00 0.00 37.76 3.86
812 871 3.645212 ACATGGAGTGGGATACATCTCTG 59.355 47.826 0.00 0.00 37.76 3.35
813 872 3.645212 CACATGGAGTGGGATACATCTCT 59.355 47.826 0.00 0.00 44.69 3.10
814 873 4.000331 CACATGGAGTGGGATACATCTC 58.000 50.000 0.00 0.00 44.69 2.75
825 884 2.028476 TCCGTAAAGTCCACATGGAGTG 60.028 50.000 9.06 0.00 46.74 3.51
827 886 3.328382 TTCCGTAAAGTCCACATGGAG 57.672 47.619 0.00 0.00 46.49 3.86
828 887 3.992943 ATTCCGTAAAGTCCACATGGA 57.007 42.857 0.00 0.00 43.08 3.41
829 888 5.646360 AGTTTATTCCGTAAAGTCCACATGG 59.354 40.000 0.00 0.00 31.75 3.66
830 889 6.737254 AGTTTATTCCGTAAAGTCCACATG 57.263 37.500 0.00 0.00 31.75 3.21
831 890 6.150474 CCAAGTTTATTCCGTAAAGTCCACAT 59.850 38.462 0.00 0.00 35.40 3.21
832 891 5.470777 CCAAGTTTATTCCGTAAAGTCCACA 59.529 40.000 0.00 0.00 35.40 4.17
833 892 5.471116 ACCAAGTTTATTCCGTAAAGTCCAC 59.529 40.000 0.00 0.00 35.40 4.02
834 893 5.623169 ACCAAGTTTATTCCGTAAAGTCCA 58.377 37.500 0.00 0.00 35.40 4.02
835 894 6.564709 AACCAAGTTTATTCCGTAAAGTCC 57.435 37.500 0.00 0.00 35.40 3.85
836 895 8.861033 AAAAACCAAGTTTATTCCGTAAAGTC 57.139 30.769 0.00 0.00 35.40 3.01
837 896 7.922278 GGAAAAACCAAGTTTATTCCGTAAAGT 59.078 33.333 13.39 0.00 37.50 2.66
838 897 7.383029 GGGAAAAACCAAGTTTATTCCGTAAAG 59.617 37.037 17.79 0.00 39.95 1.85
839 898 7.208777 GGGAAAAACCAAGTTTATTCCGTAAA 58.791 34.615 17.79 0.00 39.95 2.01
840 899 6.239261 GGGGAAAAACCAAGTTTATTCCGTAA 60.239 38.462 17.79 0.00 39.95 3.18
841 900 5.243507 GGGGAAAAACCAAGTTTATTCCGTA 59.756 40.000 17.79 0.00 39.95 4.02
842 901 4.039488 GGGGAAAAACCAAGTTTATTCCGT 59.961 41.667 17.79 0.00 39.95 4.69
843 902 4.282449 AGGGGAAAAACCAAGTTTATTCCG 59.718 41.667 17.79 0.00 39.95 4.30
844 903 5.818678 AGGGGAAAAACCAAGTTTATTCC 57.181 39.130 16.99 16.99 39.28 3.01
845 904 9.616156 TTTTTAGGGGAAAAACCAAGTTTATTC 57.384 29.630 0.00 1.26 41.16 1.75
869 928 1.501337 GGTTCGGACGGCGAGTTTTT 61.501 55.000 16.62 0.00 0.00 1.94
870 929 1.957695 GGTTCGGACGGCGAGTTTT 60.958 57.895 16.62 0.00 0.00 2.43
871 930 2.356673 GGTTCGGACGGCGAGTTT 60.357 61.111 16.62 0.00 0.00 2.66
872 931 4.712425 CGGTTCGGACGGCGAGTT 62.712 66.667 16.62 0.00 0.00 3.01
964 1083 4.735132 TTCTTCTCCACGCCGCCG 62.735 66.667 0.00 0.00 41.14 6.46
965 1084 2.358247 TTTCTTCTCCACGCCGCC 60.358 61.111 0.00 0.00 0.00 6.13
966 1085 2.391389 CCTTTCTTCTCCACGCCGC 61.391 63.158 0.00 0.00 0.00 6.53
967 1086 0.737715 CTCCTTTCTTCTCCACGCCG 60.738 60.000 0.00 0.00 0.00 6.46
968 1087 0.391793 CCTCCTTTCTTCTCCACGCC 60.392 60.000 0.00 0.00 0.00 5.68
969 1088 0.608640 TCCTCCTTTCTTCTCCACGC 59.391 55.000 0.00 0.00 0.00 5.34
970 1089 1.402984 CGTCCTCCTTTCTTCTCCACG 60.403 57.143 0.00 0.00 0.00 4.94
971 1090 1.066787 CCGTCCTCCTTTCTTCTCCAC 60.067 57.143 0.00 0.00 0.00 4.02
972 1091 1.267121 CCGTCCTCCTTTCTTCTCCA 58.733 55.000 0.00 0.00 0.00 3.86
973 1092 0.537653 CCCGTCCTCCTTTCTTCTCC 59.462 60.000 0.00 0.00 0.00 3.71
974 1093 0.108089 GCCCGTCCTCCTTTCTTCTC 60.108 60.000 0.00 0.00 0.00 2.87
975 1094 1.889530 CGCCCGTCCTCCTTTCTTCT 61.890 60.000 0.00 0.00 0.00 2.85
976 1095 1.448013 CGCCCGTCCTCCTTTCTTC 60.448 63.158 0.00 0.00 0.00 2.87
977 1096 2.663196 CGCCCGTCCTCCTTTCTT 59.337 61.111 0.00 0.00 0.00 2.52
978 1097 3.391382 CCGCCCGTCCTCCTTTCT 61.391 66.667 0.00 0.00 0.00 2.52
1482 1613 0.036294 CCTCCTTTCGGGTCTGTTCC 60.036 60.000 0.00 0.00 36.25 3.62
1494 1625 3.958860 ACTGCCGCTGCCTCCTTT 61.959 61.111 0.00 0.00 36.33 3.11
1799 1930 5.300034 TCCATGGAAGATTTGCATATGTGTC 59.700 40.000 13.46 0.00 39.89 3.67
1888 2019 4.329462 ACTCACTCTGGTCTTCAAAGTC 57.671 45.455 0.00 0.00 0.00 3.01
1893 2024 4.499188 CGTGTTTACTCACTCTGGTCTTCA 60.499 45.833 0.00 0.00 36.33 3.02
2007 2141 8.941995 AGTATTGAGTTAGACCTATCATGCTA 57.058 34.615 0.00 0.00 0.00 3.49
2193 2336 1.955080 CTGTAAGGTACTCCCGGCTAG 59.045 57.143 0.00 0.00 38.49 3.42
2244 2387 2.171237 CCTCCACTGGCAATGTGAGATA 59.829 50.000 13.55 0.00 37.60 1.98
2306 2449 2.413837 CGAAGGAATATAGGGTTGCGG 58.586 52.381 0.00 0.00 0.00 5.69
2656 2816 2.432510 GGATAGTAGCCTGCACTGACTT 59.567 50.000 0.00 0.00 0.00 3.01
3369 3535 0.962356 ATTTGGTCGCAAGCAGGGAG 60.962 55.000 0.00 0.00 40.18 4.30
3641 3839 4.824166 GAGTTGCATGGCAGCGCG 62.824 66.667 0.00 0.00 44.23 6.86
3642 3840 4.487412 GGAGTTGCATGGCAGCGC 62.487 66.667 0.00 0.00 44.23 5.92
3644 3842 3.818787 CGGGAGTTGCATGGCAGC 61.819 66.667 0.00 0.00 40.61 5.25
3720 3919 4.215908 GGACTCAAGGAAGGGAAAAAGTT 58.784 43.478 0.00 0.00 0.00 2.66
3784 3983 2.350514 GCAGCAGGCAGGAACTCT 59.649 61.111 0.00 0.00 43.97 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.