Multiple sequence alignment - TraesCS2D01G502600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G502600 chr2D 100.000 5279 0 0 1 5279 596247159 596252437 0.000000e+00 9749.0
1 TraesCS2D01G502600 chr2B 90.963 2180 113 44 1 2128 725106362 725108509 0.000000e+00 2857.0
2 TraesCS2D01G502600 chr2B 93.140 860 49 10 2875 3725 725109248 725110106 0.000000e+00 1253.0
3 TraesCS2D01G502600 chr2B 95.767 567 19 5 3726 4288 725110681 725111246 0.000000e+00 909.0
4 TraesCS2D01G502600 chr2B 88.122 724 28 24 2126 2828 725108564 725109250 0.000000e+00 808.0
5 TraesCS2D01G502600 chr2B 82.828 198 26 6 5080 5272 725111809 725112003 2.530000e-38 171.0
6 TraesCS2D01G502600 chr2B 100.000 49 0 0 4340 4388 725111328 725111376 2.020000e-14 91.6
7 TraesCS2D01G502600 chr2A 88.835 1845 108 44 698 2464 729979557 729981381 0.000000e+00 2176.0
8 TraesCS2D01G502600 chr2A 89.068 869 55 19 2875 3725 729981676 729982522 0.000000e+00 1042.0
9 TraesCS2D01G502600 chr2A 90.524 802 34 11 3820 4592 729982609 729983397 0.000000e+00 1022.0
10 TraesCS2D01G502600 chr2A 88.949 742 25 18 1 695 729978663 729979394 0.000000e+00 863.0
11 TraesCS2D01G502600 chr2A 97.087 206 6 0 2623 2828 729981473 729981678 1.090000e-91 348.0
12 TraesCS2D01G502600 chr2A 85.251 339 42 6 4923 5258 729983522 729983855 5.060000e-90 342.0
13 TraesCS2D01G502600 chr7D 82.254 417 64 5 3870 4278 540367218 540366804 8.410000e-93 351.0
14 TraesCS2D01G502600 chr7D 76.847 203 35 7 1297 1496 540369558 540369365 2.600000e-18 104.0
15 TraesCS2D01G502600 chr7D 89.091 55 6 0 1165 1219 479626292 479626238 9.490000e-08 69.4
16 TraesCS2D01G502600 chr7B 81.775 417 66 5 3870 4278 583384575 583384989 1.820000e-89 340.0
17 TraesCS2D01G502600 chr7B 76.442 208 41 5 1290 1496 583382537 583382737 7.230000e-19 106.0
18 TraesCS2D01G502600 chr7B 87.671 73 8 1 1154 1225 583382394 583382466 3.390000e-12 84.2
19 TraesCS2D01G502600 chr7B 90.909 55 5 0 1165 1219 505451459 505451405 2.040000e-09 75.0
20 TraesCS2D01G502600 chr7A 80.952 420 64 10 3870 4278 621566750 621567164 8.530000e-83 318.0
21 TraesCS2D01G502600 chr7A 80.147 136 25 2 1362 1496 621564932 621565066 3.360000e-17 100.0
22 TraesCS2D01G502600 chr7A 97.059 34 0 1 3726 3758 101305932 101305965 7.390000e-04 56.5
23 TraesCS2D01G502600 chr5A 76.355 203 31 12 1032 1228 593352333 593352524 5.630000e-15 93.5
24 TraesCS2D01G502600 chr3D 76.378 127 21 9 1090 1213 95840313 95840193 5.710000e-05 60.2
25 TraesCS2D01G502600 chr4A 92.500 40 0 3 3731 3770 634843691 634843727 3.000000e-03 54.7
26 TraesCS2D01G502600 chr6A 100.000 28 0 0 3726 3753 60973802 60973775 1.000000e-02 52.8
27 TraesCS2D01G502600 chr4B 100.000 28 0 0 3726 3753 620060535 620060562 1.000000e-02 52.8
28 TraesCS2D01G502600 chr3B 100.000 28 0 0 3729 3756 602330622 602330595 1.000000e-02 52.8
29 TraesCS2D01G502600 chr3B 100.000 28 0 0 3726 3753 650837709 650837736 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G502600 chr2D 596247159 596252437 5278 False 9749.000000 9749 100.000000 1 5279 1 chr2D.!!$F1 5278
1 TraesCS2D01G502600 chr2B 725106362 725112003 5641 False 1014.933333 2857 91.803333 1 5272 6 chr2B.!!$F1 5271
2 TraesCS2D01G502600 chr2A 729978663 729983855 5192 False 965.500000 2176 89.952333 1 5258 6 chr2A.!!$F1 5257
3 TraesCS2D01G502600 chr7D 540366804 540369558 2754 True 227.500000 351 79.550500 1297 4278 2 chr7D.!!$R2 2981
4 TraesCS2D01G502600 chr7A 621564932 621567164 2232 False 209.000000 318 80.549500 1362 4278 2 chr7A.!!$F2 2916

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
316 365 0.253327 GTTCTCCGATGAAGCCCCTT 59.747 55.0 0.0 0.0 0.00 3.95 F
794 1039 0.466739 ACCAACGGAACCAACCCTTC 60.467 55.0 0.0 0.0 0.00 3.46 F
2262 3647 0.252103 TGGGAAGCTAGTCGGGTTCT 60.252 55.0 0.0 0.0 41.64 3.01 F
2828 4368 0.033991 GCTTTCCCTCCCTTCCTTCC 60.034 60.0 0.0 0.0 0.00 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1516 1797 0.249398 GGTACGATGGCTGAAGTGGT 59.751 55.0 0.00 0.00 0.00 4.16 R
2509 3921 0.322906 GAGTTTCAGCAGGGAAGGGG 60.323 60.0 0.00 0.00 0.00 4.79 R
3438 5130 1.143813 CATCATAGGGTGGGCCTTCT 58.856 55.0 4.53 1.89 34.45 2.85 R
4757 7087 0.033109 AGGATAACCCCTGCCTTTGC 60.033 55.0 0.00 0.00 34.68 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
316 365 0.253327 GTTCTCCGATGAAGCCCCTT 59.747 55.000 0.00 0.00 0.00 3.95
415 464 3.839778 AGCTCCCCTTACTCTATCACTC 58.160 50.000 0.00 0.00 0.00 3.51
526 610 1.758122 GGATCCCCCGCTGCAAAAT 60.758 57.895 0.00 0.00 0.00 1.82
533 617 1.000731 CCCCGCTGCAAAATTGAAGAA 59.999 47.619 5.29 0.00 35.78 2.52
595 680 2.360949 ATCGATCAGCTCTGCACCGG 62.361 60.000 0.00 0.00 0.00 5.28
687 772 2.586079 CATCCGCGCCGAGATTGT 60.586 61.111 0.00 0.00 0.00 2.71
698 783 1.404986 CCGAGATTGTAAACGGCTGGA 60.405 52.381 0.00 0.00 38.98 3.86
789 1034 2.330041 CGCACCAACGGAACCAAC 59.670 61.111 0.00 0.00 0.00 3.77
793 1038 0.753848 CACCAACGGAACCAACCCTT 60.754 55.000 0.00 0.00 0.00 3.95
794 1039 0.466739 ACCAACGGAACCAACCCTTC 60.467 55.000 0.00 0.00 0.00 3.46
795 1040 1.176619 CCAACGGAACCAACCCTTCC 61.177 60.000 0.00 0.00 34.81 3.46
984 1249 3.388703 GAGCTGAGCTGAGCAGGGG 62.389 68.421 27.28 0.00 39.88 4.79
986 1251 4.486503 CTGAGCTGAGCAGGGGCC 62.487 72.222 7.39 0.00 42.56 5.80
1152 1417 2.782045 CGTCATCTCGCAGCACGTG 61.782 63.158 12.28 12.28 44.19 4.49
1247 1513 0.898320 TCTCTTCCCTTCTTGCTCCG 59.102 55.000 0.00 0.00 0.00 4.63
1287 1553 3.991051 CGTGCCCTGACCGTGACT 61.991 66.667 0.00 0.00 0.00 3.41
1288 1554 2.048127 GTGCCCTGACCGTGACTC 60.048 66.667 0.00 0.00 0.00 3.36
1509 1778 1.673168 GTCGTCTCCCTGGTACGTAT 58.327 55.000 0.00 0.00 37.83 3.06
1510 1779 1.601430 GTCGTCTCCCTGGTACGTATC 59.399 57.143 0.00 0.00 37.83 2.24
1515 1796 2.023695 TCTCCCTGGTACGTATCCCTTT 60.024 50.000 2.79 0.00 0.00 3.11
1516 1797 3.205056 TCTCCCTGGTACGTATCCCTTTA 59.795 47.826 2.79 0.00 0.00 1.85
1520 1801 3.181472 CCTGGTACGTATCCCTTTACCAC 60.181 52.174 2.79 0.00 39.25 4.16
1528 1809 1.440618 TCCCTTTACCACTTCAGCCA 58.559 50.000 0.00 0.00 0.00 4.75
1536 1817 0.806102 CCACTTCAGCCATCGTACCG 60.806 60.000 0.00 0.00 0.00 4.02
1658 1940 3.391382 CACGGACCCCAGGACTCC 61.391 72.222 0.00 0.00 0.00 3.85
1708 1990 0.678366 GTCAGGCTCGTCTCCTCTCA 60.678 60.000 0.00 0.00 0.00 3.27
1847 2259 4.379243 CCAGCTCGCCCGTCAGTT 62.379 66.667 0.00 0.00 0.00 3.16
1861 2273 5.522824 GCCCGTCAGTTACTTTTTAGATAGG 59.477 44.000 0.00 0.00 0.00 2.57
1917 2514 2.193248 GTAGCCATGGTCCAGCCC 59.807 66.667 14.67 0.00 36.04 5.19
1979 2772 0.455005 TGCAGAGTCAGAGAGATGCG 59.545 55.000 0.00 0.00 36.47 4.73
1999 2792 3.077556 AGGGTGGCTCGATCGCTT 61.078 61.111 11.09 0.00 0.00 4.68
2135 3433 4.503314 CGGTTCCGGGGCGAGTAC 62.503 72.222 0.00 0.00 0.00 2.73
2219 3604 3.681835 GCGACAGGGACGTGACCT 61.682 66.667 0.00 0.00 39.43 3.85
2262 3647 0.252103 TGGGAAGCTAGTCGGGTTCT 60.252 55.000 0.00 0.00 41.64 3.01
2314 3704 1.359848 GTCTGTATGTTGCCCGTGAG 58.640 55.000 0.00 0.00 0.00 3.51
2334 3743 4.602259 CGTGACGGGTGCCTGTGT 62.602 66.667 7.52 0.00 35.39 3.72
2459 3871 6.367969 GGTATGGACAATTTAGCCTACATACG 59.632 42.308 0.00 0.00 39.93 3.06
2501 3913 3.481453 GGAGCACCAGGAGAAAATATCC 58.519 50.000 0.00 0.00 37.07 2.59
2504 3916 3.117738 AGCACCAGGAGAAAATATCCCAG 60.118 47.826 0.00 0.00 37.57 4.45
2505 3917 3.217626 CACCAGGAGAAAATATCCCAGC 58.782 50.000 0.00 0.00 37.57 4.85
2508 3920 3.484407 CAGGAGAAAATATCCCAGCAGG 58.516 50.000 0.00 0.00 37.57 4.85
2509 3921 2.158549 AGGAGAAAATATCCCAGCAGGC 60.159 50.000 0.00 0.00 37.57 4.85
2510 3922 2.234143 GAGAAAATATCCCAGCAGGCC 58.766 52.381 0.00 0.00 34.51 5.19
2511 3923 1.133356 AGAAAATATCCCAGCAGGCCC 60.133 52.381 0.00 0.00 34.51 5.80
2512 3924 0.105504 AAAATATCCCAGCAGGCCCC 60.106 55.000 0.00 0.00 34.51 5.80
2539 3951 2.079925 GCTGAAACTCTGTCATGGACC 58.920 52.381 0.00 0.00 0.00 4.46
2540 3952 2.341257 CTGAAACTCTGTCATGGACCG 58.659 52.381 0.00 0.00 0.00 4.79
2541 3953 1.967779 TGAAACTCTGTCATGGACCGA 59.032 47.619 0.00 0.00 0.00 4.69
2542 3954 2.567169 TGAAACTCTGTCATGGACCGAT 59.433 45.455 0.00 0.00 0.00 4.18
2543 3955 2.680312 AACTCTGTCATGGACCGATG 57.320 50.000 0.00 0.00 0.00 3.84
2544 3956 0.826715 ACTCTGTCATGGACCGATGG 59.173 55.000 0.00 0.00 0.00 3.51
2545 3957 1.114627 CTCTGTCATGGACCGATGGA 58.885 55.000 0.00 0.00 0.00 3.41
2546 3958 0.824109 TCTGTCATGGACCGATGGAC 59.176 55.000 0.00 0.00 0.00 4.02
2563 3975 2.106332 CGGCTCCCGCTAAATCGT 59.894 61.111 0.00 0.00 41.17 3.73
2589 4001 4.832266 GGATTACCATGGGAATGCAATACA 59.168 41.667 30.72 0.00 35.97 2.29
2595 4007 3.435105 TGGGAATGCAATACAAATCGC 57.565 42.857 0.00 0.00 34.00 4.58
2611 4023 1.882912 TCGCTGCTGACAAGTTCATT 58.117 45.000 0.00 0.00 32.17 2.57
2614 4026 2.722629 CGCTGCTGACAAGTTCATTTTG 59.277 45.455 0.00 0.00 32.17 2.44
2617 4029 3.708890 TGCTGACAAGTTCATTTTGCTG 58.291 40.909 0.00 0.00 32.17 4.41
2620 4032 3.708890 TGACAAGTTCATTTTGCTGCTG 58.291 40.909 0.00 0.00 0.00 4.41
2814 4354 0.034337 TCCGGTACACCACTGCTTTC 59.966 55.000 0.00 0.00 35.14 2.62
2818 4358 1.610886 GGTACACCACTGCTTTCCCTC 60.611 57.143 0.00 0.00 35.64 4.30
2828 4368 0.033991 GCTTTCCCTCCCTTCCTTCC 60.034 60.000 0.00 0.00 0.00 3.46
2829 4369 0.253327 CTTTCCCTCCCTTCCTTCCG 59.747 60.000 0.00 0.00 0.00 4.30
2830 4370 0.475048 TTTCCCTCCCTTCCTTCCGT 60.475 55.000 0.00 0.00 0.00 4.69
2831 4371 0.908180 TTCCCTCCCTTCCTTCCGTC 60.908 60.000 0.00 0.00 0.00 4.79
2832 4372 2.722201 CCCTCCCTTCCTTCCGTCG 61.722 68.421 0.00 0.00 0.00 5.12
2833 4373 1.982938 CCTCCCTTCCTTCCGTCGT 60.983 63.158 0.00 0.00 0.00 4.34
2834 4374 1.511768 CTCCCTTCCTTCCGTCGTC 59.488 63.158 0.00 0.00 0.00 4.20
2835 4375 1.228644 TCCCTTCCTTCCGTCGTCA 60.229 57.895 0.00 0.00 0.00 4.35
2837 4377 1.080025 CCTTCCTTCCGTCGTCACC 60.080 63.158 0.00 0.00 0.00 4.02
2838 4378 1.663739 CTTCCTTCCGTCGTCACCA 59.336 57.895 0.00 0.00 0.00 4.17
2840 4380 1.393487 TTCCTTCCGTCGTCACCACA 61.393 55.000 0.00 0.00 0.00 4.17
2841 4381 1.663702 CCTTCCGTCGTCACCACAC 60.664 63.158 0.00 0.00 0.00 3.82
2843 4383 2.083835 CTTCCGTCGTCACCACACCT 62.084 60.000 0.00 0.00 0.00 4.00
2844 4384 2.049433 CCGTCGTCACCACACCTC 60.049 66.667 0.00 0.00 0.00 3.85
2845 4385 2.049433 CGTCGTCACCACACCTCC 60.049 66.667 0.00 0.00 0.00 4.30
2846 4386 2.561956 CGTCGTCACCACACCTCCT 61.562 63.158 0.00 0.00 0.00 3.69
2847 4387 1.289380 GTCGTCACCACACCTCCTC 59.711 63.158 0.00 0.00 0.00 3.71
2848 4388 2.258591 CGTCACCACACCTCCTCG 59.741 66.667 0.00 0.00 0.00 4.63
2849 4389 2.048127 GTCACCACACCTCCTCGC 60.048 66.667 0.00 0.00 0.00 5.03
2850 4390 2.523168 TCACCACACCTCCTCGCA 60.523 61.111 0.00 0.00 0.00 5.10
2851 4391 1.913262 TCACCACACCTCCTCGCAT 60.913 57.895 0.00 0.00 0.00 4.73
2852 4392 1.003355 CACCACACCTCCTCGCATT 60.003 57.895 0.00 0.00 0.00 3.56
2853 4393 1.021390 CACCACACCTCCTCGCATTC 61.021 60.000 0.00 0.00 0.00 2.67
2854 4394 1.811266 CCACACCTCCTCGCATTCG 60.811 63.158 0.00 0.00 0.00 3.34
2855 4395 2.125512 ACACCTCCTCGCATTCGC 60.126 61.111 0.00 0.00 35.26 4.70
2856 4396 2.125552 CACCTCCTCGCATTCGCA 60.126 61.111 0.00 0.00 38.40 5.10
2857 4397 1.522355 CACCTCCTCGCATTCGCAT 60.522 57.895 0.00 0.00 38.40 4.73
2858 4398 1.522355 ACCTCCTCGCATTCGCATG 60.522 57.895 0.00 0.00 38.40 4.06
2868 4408 2.554806 CATTCGCATGCACAGTGATT 57.445 45.000 19.57 0.00 0.00 2.57
2869 4409 3.678915 CATTCGCATGCACAGTGATTA 57.321 42.857 19.57 0.00 0.00 1.75
2870 4410 4.018649 CATTCGCATGCACAGTGATTAA 57.981 40.909 19.57 0.00 0.00 1.40
2871 4411 4.413969 CATTCGCATGCACAGTGATTAAA 58.586 39.130 19.57 0.00 0.00 1.52
2872 4412 3.745332 TCGCATGCACAGTGATTAAAG 57.255 42.857 19.57 0.00 0.00 1.85
2873 4413 3.333804 TCGCATGCACAGTGATTAAAGA 58.666 40.909 19.57 0.00 0.00 2.52
2874 4414 3.940852 TCGCATGCACAGTGATTAAAGAT 59.059 39.130 19.57 0.00 0.00 2.40
2875 4415 4.395854 TCGCATGCACAGTGATTAAAGATT 59.604 37.500 19.57 0.00 0.00 2.40
2876 4416 4.731961 CGCATGCACAGTGATTAAAGATTC 59.268 41.667 19.57 0.00 0.00 2.52
2877 4417 5.039333 GCATGCACAGTGATTAAAGATTCC 58.961 41.667 14.21 0.00 0.00 3.01
2903 4443 3.398954 AGCGTTTGCACCGTATTATTG 57.601 42.857 6.80 0.00 46.23 1.90
2908 4448 5.394322 GCGTTTGCACCGTATTATTGTATTC 59.606 40.000 6.80 0.00 42.15 1.75
2909 4449 6.479436 CGTTTGCACCGTATTATTGTATTCA 58.521 36.000 0.00 0.00 0.00 2.57
2911 4451 7.045225 CGTTTGCACCGTATTATTGTATTCAAC 60.045 37.037 0.00 0.00 36.33 3.18
2912 4452 6.986904 TGCACCGTATTATTGTATTCAACA 57.013 33.333 0.00 0.00 36.33 3.33
2913 4453 7.561021 TGCACCGTATTATTGTATTCAACAT 57.439 32.000 0.00 0.00 38.10 2.71
2915 4455 8.126074 TGCACCGTATTATTGTATTCAACATTC 58.874 33.333 0.00 0.00 38.10 2.67
2916 4456 8.126074 GCACCGTATTATTGTATTCAACATTCA 58.874 33.333 0.00 0.00 38.10 2.57
2917 4457 9.650371 CACCGTATTATTGTATTCAACATTCAG 57.350 33.333 0.00 0.00 38.10 3.02
2918 4458 9.391006 ACCGTATTATTGTATTCAACATTCAGT 57.609 29.630 0.00 0.00 38.10 3.41
3022 4577 0.235926 GACAAAGCGGCTCACTGTTC 59.764 55.000 1.45 0.00 0.00 3.18
3028 4583 1.069765 CGGCTCACTGTTCCACACT 59.930 57.895 0.00 0.00 0.00 3.55
3041 4596 0.038892 CCACACTGCACTGCATTTCC 60.039 55.000 3.64 0.00 38.13 3.13
3044 4599 0.524862 CACTGCACTGCATTTCCCTC 59.475 55.000 3.64 0.00 38.13 4.30
3073 4631 1.339055 CGATGAAAAGAGCCTCCCACA 60.339 52.381 0.00 0.00 0.00 4.17
3076 4634 3.243359 TGAAAAGAGCCTCCCACATTT 57.757 42.857 0.00 0.00 0.00 2.32
3139 4697 9.841880 GGTGATAAAACAGAGGTAATTTCTTTC 57.158 33.333 0.00 0.00 0.00 2.62
3171 4729 0.112995 ATGGAGGCCTCTTTTGCACA 59.887 50.000 31.36 19.14 0.00 4.57
3204 4763 4.142966 CCGGAATCTACTTTCGTTGGAAAC 60.143 45.833 0.00 0.00 45.31 2.78
3228 4787 6.082338 CACATAGAAAGTCATGTGCTGTTTC 58.918 40.000 2.11 0.00 43.86 2.78
3340 4900 7.651304 GGATGATAAACTATCTCAGTCACAGTG 59.349 40.741 0.00 0.00 36.04 3.66
3438 5130 1.981853 GCTTGGATTCGGGGCCAAA 60.982 57.895 4.39 0.00 43.09 3.28
3462 5154 0.532862 GCCCACCCTATGATGACACG 60.533 60.000 0.00 0.00 0.00 4.49
3482 5174 7.707464 TGACACGAAATAGAAACAAAGTACTGA 59.293 33.333 0.00 0.00 0.00 3.41
3489 5181 7.778470 ATAGAAACAAAGTACTGATAGCAGC 57.222 36.000 8.16 0.00 46.26 5.25
3530 5222 2.477845 ATTTGGCCCATGCAAAGTTC 57.522 45.000 0.00 0.00 40.13 3.01
3543 5235 3.781079 CAAAGTTCAAAGGACTGTGCA 57.219 42.857 1.24 0.00 0.00 4.57
3544 5236 3.699067 CAAAGTTCAAAGGACTGTGCAG 58.301 45.455 1.24 0.00 0.00 4.41
3725 5417 7.919690 TCTCATTGCTAAAAGTAATTCATCCG 58.080 34.615 0.00 0.00 27.75 4.18
3738 6005 2.347697 TCATCCGTTTCAGTCGACTG 57.652 50.000 34.76 34.76 45.08 3.51
3752 6019 4.632740 GTCGACTGAGACTTAGCAAAAC 57.367 45.455 8.70 0.00 38.09 2.43
3753 6020 3.429207 GTCGACTGAGACTTAGCAAAACC 59.571 47.826 8.70 0.00 38.09 3.27
3781 6050 6.442513 AACTGAAGAACTGTTTTCTCAAGG 57.557 37.500 12.96 3.10 37.37 3.61
3848 6117 3.624326 TTGAATCTGTTTCGTGCCTTG 57.376 42.857 0.00 0.00 37.13 3.61
3864 6134 6.989759 TCGTGCCTTGATTGTGTTACATATAT 59.010 34.615 0.00 0.00 0.00 0.86
3865 6135 7.042119 TCGTGCCTTGATTGTGTTACATATATG 60.042 37.037 11.29 11.29 0.00 1.78
4282 6559 0.801067 CACCGCCGTCAACTAGCTAC 60.801 60.000 0.00 0.00 0.00 3.58
4288 6566 1.531912 CGTCAACTAGCTACCGTTCG 58.468 55.000 0.00 0.00 0.00 3.95
4291 6569 1.200716 TCAACTAGCTACCGTTCGGTG 59.799 52.381 24.37 15.62 39.14 4.94
4301 6579 3.698463 GTTCGGTGCGGTCGTGTG 61.698 66.667 0.00 0.00 0.00 3.82
4310 6599 1.850640 CGGTCGTGTGTGTGTTAGC 59.149 57.895 0.00 0.00 0.00 3.09
4329 6618 2.039951 TTGGGCCCGTAGCTAGGT 59.960 61.111 19.37 0.00 43.05 3.08
4396 6704 1.663643 CTTGTGTGTGTGCGTTAGTGT 59.336 47.619 0.00 0.00 0.00 3.55
4432 6744 4.616953 GTTTTGTGGTGGGATTGTGTTAG 58.383 43.478 0.00 0.00 0.00 2.34
4465 6778 1.780309 GGGGATGTGGTATGGAATGGA 59.220 52.381 0.00 0.00 0.00 3.41
4467 6780 3.181418 GGGGATGTGGTATGGAATGGATT 60.181 47.826 0.00 0.00 0.00 3.01
4468 6781 4.044065 GGGGATGTGGTATGGAATGGATTA 59.956 45.833 0.00 0.00 0.00 1.75
4539 6869 1.746220 TGAAAGTGGTGTTCGTTTGGG 59.254 47.619 0.00 0.00 0.00 4.12
4542 6872 0.812412 AGTGGTGTTCGTTTGGGTCG 60.812 55.000 0.00 0.00 0.00 4.79
4550 6880 1.729131 CGTTTGGGTCGCAACATGC 60.729 57.895 1.10 0.00 40.69 4.06
4554 6884 2.672996 GGGTCGCAACATGCCTGT 60.673 61.111 0.00 0.00 41.12 4.00
4561 6891 0.037975 GCAACATGCCTGTCTTTGGG 60.038 55.000 0.00 0.00 37.42 4.12
4577 6907 0.696143 TGGGGTTCCAGGTTCAGTGA 60.696 55.000 0.00 0.00 38.32 3.41
4588 6918 1.464997 GGTTCAGTGATCGCTTGGAAC 59.535 52.381 22.26 22.26 35.20 3.62
4589 6919 2.143122 GTTCAGTGATCGCTTGGAACA 58.857 47.619 24.09 0.92 35.81 3.18
4590 6920 2.744202 GTTCAGTGATCGCTTGGAACAT 59.256 45.455 24.09 0.00 39.30 2.71
4591 6921 3.885724 TCAGTGATCGCTTGGAACATA 57.114 42.857 5.91 0.00 39.30 2.29
4597 6927 4.387256 GTGATCGCTTGGAACATAGATAGC 59.613 45.833 0.00 0.00 39.30 2.97
4632 6962 3.701205 TTATCTCCACAGCAGCAGAAA 57.299 42.857 0.00 0.00 0.00 2.52
4633 6963 2.803030 ATCTCCACAGCAGCAGAAAT 57.197 45.000 0.00 0.00 0.00 2.17
4636 6966 1.129998 CTCCACAGCAGCAGAAATTCG 59.870 52.381 0.00 0.00 0.00 3.34
4640 6970 1.734465 ACAGCAGCAGAAATTCGTAGC 59.266 47.619 0.00 1.07 0.00 3.58
4650 6980 5.554636 CAGAAATTCGTAGCAATCACAGAC 58.445 41.667 0.00 0.00 0.00 3.51
4653 6983 2.941453 TCGTAGCAATCACAGACCTC 57.059 50.000 0.00 0.00 0.00 3.85
4655 6985 1.471676 CGTAGCAATCACAGACCTCCC 60.472 57.143 0.00 0.00 0.00 4.30
4657 6987 1.293062 AGCAATCACAGACCTCCCAT 58.707 50.000 0.00 0.00 0.00 4.00
4658 6988 1.637553 AGCAATCACAGACCTCCCATT 59.362 47.619 0.00 0.00 0.00 3.16
4659 6989 1.747355 GCAATCACAGACCTCCCATTG 59.253 52.381 0.00 0.00 0.00 2.82
4660 6990 2.881403 GCAATCACAGACCTCCCATTGT 60.881 50.000 0.00 0.00 0.00 2.71
4661 6991 3.622206 GCAATCACAGACCTCCCATTGTA 60.622 47.826 0.00 0.00 0.00 2.41
4662 6992 4.785301 CAATCACAGACCTCCCATTGTAT 58.215 43.478 0.00 0.00 0.00 2.29
4663 6993 4.696479 ATCACAGACCTCCCATTGTATC 57.304 45.455 0.00 0.00 0.00 2.24
4666 6996 1.421646 CAGACCTCCCATTGTATCCCC 59.578 57.143 0.00 0.00 0.00 4.81
4667 6997 0.771755 GACCTCCCATTGTATCCCCC 59.228 60.000 0.00 0.00 0.00 5.40
4670 7000 2.020441 ACCTCCCATTGTATCCCCCTTA 60.020 50.000 0.00 0.00 0.00 2.69
4671 7001 2.375509 CCTCCCATTGTATCCCCCTTAC 59.624 54.545 0.00 0.00 0.00 2.34
4672 7002 2.038557 CTCCCATTGTATCCCCCTTACG 59.961 54.545 0.00 0.00 0.00 3.18
4673 7003 1.073284 CCCATTGTATCCCCCTTACGG 59.927 57.143 0.00 0.00 0.00 4.02
4674 7004 2.051692 CCATTGTATCCCCCTTACGGA 58.948 52.381 0.00 0.00 0.00 4.69
4675 7005 2.224450 CCATTGTATCCCCCTTACGGAC 60.224 54.545 0.00 0.00 30.39 4.79
4676 7006 2.555732 TTGTATCCCCCTTACGGACT 57.444 50.000 0.00 0.00 30.39 3.85
4677 7007 1.784358 TGTATCCCCCTTACGGACTG 58.216 55.000 0.00 0.00 30.39 3.51
4679 7009 2.090943 TGTATCCCCCTTACGGACTGAT 60.091 50.000 0.00 0.00 30.39 2.90
4680 7010 1.718280 ATCCCCCTTACGGACTGATC 58.282 55.000 0.00 0.00 30.39 2.92
4681 7011 0.754217 TCCCCCTTACGGACTGATCG 60.754 60.000 0.00 0.00 0.00 3.69
4682 7012 0.754217 CCCCCTTACGGACTGATCGA 60.754 60.000 0.00 0.00 0.00 3.59
4683 7013 1.108776 CCCCTTACGGACTGATCGAA 58.891 55.000 0.00 0.00 0.00 3.71
4684 7014 1.202382 CCCCTTACGGACTGATCGAAC 60.202 57.143 0.00 0.00 0.00 3.95
4685 7015 1.475280 CCCTTACGGACTGATCGAACA 59.525 52.381 0.00 0.00 0.00 3.18
4686 7016 2.094390 CCCTTACGGACTGATCGAACAA 60.094 50.000 0.00 0.00 0.00 2.83
4687 7017 2.921754 CCTTACGGACTGATCGAACAAC 59.078 50.000 0.00 0.00 0.00 3.32
4688 7018 2.642139 TACGGACTGATCGAACAACC 57.358 50.000 0.00 3.00 0.00 3.77
4690 7020 1.336887 ACGGACTGATCGAACAACCAG 60.337 52.381 15.11 8.97 0.00 4.00
4692 7022 1.002087 GGACTGATCGAACAACCAGGT 59.998 52.381 11.67 0.00 0.00 4.00
4693 7023 2.069273 GACTGATCGAACAACCAGGTG 58.931 52.381 0.00 0.00 0.00 4.00
4694 7024 1.691976 ACTGATCGAACAACCAGGTGA 59.308 47.619 0.00 0.00 0.00 4.02
4695 7025 2.069273 CTGATCGAACAACCAGGTGAC 58.931 52.381 0.00 0.00 0.00 3.67
4696 7026 1.270625 TGATCGAACAACCAGGTGACC 60.271 52.381 0.00 0.00 0.00 4.02
4701 7031 2.767505 GAACAACCAGGTGACCAGTAG 58.232 52.381 3.63 0.00 0.00 2.57
4704 7034 0.977395 AACCAGGTGACCAGTAGAGC 59.023 55.000 3.63 0.00 0.00 4.09
4731 7061 1.825090 TGCAAGGCAGATACAAGGTG 58.175 50.000 0.00 0.00 33.32 4.00
4732 7062 0.453390 GCAAGGCAGATACAAGGTGC 59.547 55.000 0.00 0.00 36.42 5.01
4738 7068 1.683943 CAGATACAAGGTGCCCATGG 58.316 55.000 4.14 4.14 0.00 3.66
4748 7078 3.072468 GCCCATGGCTGTGTGCAT 61.072 61.111 6.09 0.00 46.69 3.96
4749 7079 3.072486 GCCCATGGCTGTGTGCATC 62.072 63.158 6.09 0.00 46.69 3.91
4750 7080 2.767445 CCCATGGCTGTGTGCATCG 61.767 63.158 6.09 0.00 45.15 3.84
4751 7081 2.101575 CATGGCTGTGTGCATCGC 59.898 61.111 0.00 0.00 45.15 4.58
4752 7082 3.136123 ATGGCTGTGTGCATCGCC 61.136 61.111 10.43 10.43 45.15 5.54
4756 7086 2.512286 CTGTGTGCATCGCCCGAT 60.512 61.111 0.00 0.00 34.81 4.18
4763 7093 2.717485 CATCGCCCGATGCAAAGG 59.283 61.111 16.48 0.00 44.27 3.11
4764 7094 3.211963 ATCGCCCGATGCAAAGGC 61.212 61.111 13.50 13.50 43.53 4.35
4775 7105 2.504920 GCAAAGGCAGGGGTTATCC 58.495 57.895 0.00 0.00 40.72 2.59
4776 7106 0.033109 GCAAAGGCAGGGGTTATCCT 60.033 55.000 0.00 0.00 40.72 3.24
4777 7107 2.024306 GCAAAGGCAGGGGTTATCCTC 61.024 57.143 0.00 0.00 40.72 3.71
4778 7108 0.927029 AAAGGCAGGGGTTATCCTCC 59.073 55.000 0.00 0.00 33.94 4.30
4779 7109 0.046397 AAGGCAGGGGTTATCCTCCT 59.954 55.000 0.00 0.00 36.60 3.69
4780 7110 0.046397 AGGCAGGGGTTATCCTCCTT 59.954 55.000 0.00 0.00 33.59 3.36
4781 7111 0.927029 GGCAGGGGTTATCCTCCTTT 59.073 55.000 0.00 0.00 33.94 3.11
4782 7112 1.288037 GGCAGGGGTTATCCTCCTTTT 59.712 52.381 0.00 0.00 33.94 2.27
4783 7113 2.656002 GCAGGGGTTATCCTCCTTTTC 58.344 52.381 0.00 0.00 33.94 2.29
4784 7114 2.919228 CAGGGGTTATCCTCCTTTTCG 58.081 52.381 0.00 0.00 33.94 3.46
4785 7115 2.504175 CAGGGGTTATCCTCCTTTTCGA 59.496 50.000 0.00 0.00 33.94 3.71
4786 7116 3.054655 CAGGGGTTATCCTCCTTTTCGAA 60.055 47.826 0.00 0.00 33.94 3.71
4787 7117 3.200165 AGGGGTTATCCTCCTTTTCGAAG 59.800 47.826 0.00 0.00 33.94 3.79
4788 7118 3.199289 GGGGTTATCCTCCTTTTCGAAGA 59.801 47.826 0.00 0.00 35.33 2.87
4789 7119 4.324022 GGGGTTATCCTCCTTTTCGAAGAA 60.324 45.833 0.00 0.00 37.44 2.52
4790 7120 5.250982 GGGTTATCCTCCTTTTCGAAGAAA 58.749 41.667 0.00 0.00 45.90 2.52
4791 7121 5.708697 GGGTTATCCTCCTTTTCGAAGAAAA 59.291 40.000 0.00 7.58 45.90 2.29
4792 7122 6.208007 GGGTTATCCTCCTTTTCGAAGAAAAA 59.792 38.462 8.92 0.00 45.90 1.94
4812 7142 1.422531 AAAAAGATGCAAGGTGCCCA 58.577 45.000 0.00 0.00 44.23 5.36
4813 7143 1.422531 AAAAGATGCAAGGTGCCCAA 58.577 45.000 0.00 0.00 44.23 4.12
4814 7144 1.422531 AAAGATGCAAGGTGCCCAAA 58.577 45.000 0.00 0.00 44.23 3.28
4815 7145 1.422531 AAGATGCAAGGTGCCCAAAA 58.577 45.000 0.00 0.00 44.23 2.44
4816 7146 1.422531 AGATGCAAGGTGCCCAAAAA 58.577 45.000 0.00 0.00 44.23 1.94
4817 7147 1.345415 AGATGCAAGGTGCCCAAAAAG 59.655 47.619 0.00 0.00 44.23 2.27
4818 7148 1.070601 GATGCAAGGTGCCCAAAAAGT 59.929 47.619 0.00 0.00 44.23 2.66
4819 7149 0.463620 TGCAAGGTGCCCAAAAAGTC 59.536 50.000 0.00 0.00 44.23 3.01
4820 7150 0.752658 GCAAGGTGCCCAAAAAGTCT 59.247 50.000 0.00 0.00 37.42 3.24
4821 7151 1.538849 GCAAGGTGCCCAAAAAGTCTG 60.539 52.381 0.00 0.00 37.42 3.51
4822 7152 1.756538 CAAGGTGCCCAAAAAGTCTGT 59.243 47.619 0.00 0.00 0.00 3.41
4823 7153 2.159179 AGGTGCCCAAAAAGTCTGTT 57.841 45.000 0.00 0.00 0.00 3.16
4824 7154 2.031870 AGGTGCCCAAAAAGTCTGTTC 58.968 47.619 0.00 0.00 0.00 3.18
4825 7155 1.269051 GGTGCCCAAAAAGTCTGTTCG 60.269 52.381 0.00 0.00 0.00 3.95
4826 7156 0.383949 TGCCCAAAAAGTCTGTTCGC 59.616 50.000 0.00 0.00 0.00 4.70
4827 7157 0.383949 GCCCAAAAAGTCTGTTCGCA 59.616 50.000 0.00 0.00 0.00 5.10
4828 7158 1.202359 GCCCAAAAAGTCTGTTCGCAA 60.202 47.619 0.00 0.00 0.00 4.85
4829 7159 2.731217 CCCAAAAAGTCTGTTCGCAAG 58.269 47.619 0.00 0.00 0.00 4.01
4830 7160 2.543653 CCCAAAAAGTCTGTTCGCAAGG 60.544 50.000 0.00 0.00 38.47 3.61
4831 7161 2.119457 CAAAAAGTCTGTTCGCAAGGC 58.881 47.619 0.00 0.00 38.47 4.35
4832 7162 1.388547 AAAAGTCTGTTCGCAAGGCA 58.611 45.000 0.00 0.00 38.47 4.75
4833 7163 1.609208 AAAGTCTGTTCGCAAGGCAT 58.391 45.000 0.00 0.00 38.47 4.40
4834 7164 1.160137 AAGTCTGTTCGCAAGGCATC 58.840 50.000 0.00 0.00 38.47 3.91
4835 7165 1.016130 AGTCTGTTCGCAAGGCATCG 61.016 55.000 0.00 0.00 38.47 3.84
4836 7166 1.014044 GTCTGTTCGCAAGGCATCGA 61.014 55.000 0.00 0.00 38.47 3.59
4837 7167 0.320334 TCTGTTCGCAAGGCATCGAA 60.320 50.000 0.00 4.78 41.65 3.71
4838 7168 0.095935 CTGTTCGCAAGGCATCGAAG 59.904 55.000 8.35 0.00 44.04 3.79
4839 7169 0.320334 TGTTCGCAAGGCATCGAAGA 60.320 50.000 8.35 5.43 44.04 2.87
4840 7170 0.796312 GTTCGCAAGGCATCGAAGAA 59.204 50.000 8.35 0.00 44.04 2.52
4841 7171 1.078709 TTCGCAAGGCATCGAAGAAG 58.921 50.000 0.00 0.00 39.43 2.85
4842 7172 0.246360 TCGCAAGGCATCGAAGAAGA 59.754 50.000 0.00 0.00 38.11 2.87
4843 7173 1.078709 CGCAAGGCATCGAAGAAGAA 58.921 50.000 0.00 0.00 43.58 2.52
4844 7174 1.201965 CGCAAGGCATCGAAGAAGAAC 60.202 52.381 0.00 0.00 43.58 3.01
4845 7175 1.806542 GCAAGGCATCGAAGAAGAACA 59.193 47.619 0.00 0.00 43.58 3.18
4846 7176 2.226437 GCAAGGCATCGAAGAAGAACAA 59.774 45.455 0.00 0.00 43.58 2.83
4847 7177 3.304659 GCAAGGCATCGAAGAAGAACAAA 60.305 43.478 0.00 0.00 43.58 2.83
4848 7178 4.470462 CAAGGCATCGAAGAAGAACAAAG 58.530 43.478 0.00 0.00 43.58 2.77
4849 7179 2.485814 AGGCATCGAAGAAGAACAAAGC 59.514 45.455 0.00 0.00 43.58 3.51
4850 7180 2.226437 GGCATCGAAGAAGAACAAAGCA 59.774 45.455 0.00 0.00 43.58 3.91
4851 7181 3.229552 GCATCGAAGAAGAACAAAGCAC 58.770 45.455 0.00 0.00 43.58 4.40
4852 7182 3.473367 CATCGAAGAAGAACAAAGCACG 58.527 45.455 0.00 0.00 43.58 5.34
4853 7183 1.260561 TCGAAGAAGAACAAAGCACGC 59.739 47.619 0.00 0.00 0.00 5.34
4854 7184 1.003972 CGAAGAAGAACAAAGCACGCA 60.004 47.619 0.00 0.00 0.00 5.24
4855 7185 2.644078 GAAGAAGAACAAAGCACGCAG 58.356 47.619 0.00 0.00 0.00 5.18
4856 7186 0.947244 AGAAGAACAAAGCACGCAGG 59.053 50.000 0.00 0.00 0.00 4.85
4857 7187 0.663153 GAAGAACAAAGCACGCAGGT 59.337 50.000 0.00 0.00 0.00 4.00
4858 7188 1.065551 GAAGAACAAAGCACGCAGGTT 59.934 47.619 0.00 0.00 40.25 3.50
4859 7189 1.961793 AGAACAAAGCACGCAGGTTA 58.038 45.000 0.00 0.00 36.83 2.85
4860 7190 1.873591 AGAACAAAGCACGCAGGTTAG 59.126 47.619 0.00 0.00 36.83 2.34
4861 7191 1.871039 GAACAAAGCACGCAGGTTAGA 59.129 47.619 0.00 0.00 36.83 2.10
4862 7192 1.961793 ACAAAGCACGCAGGTTAGAA 58.038 45.000 0.00 0.00 36.83 2.10
4863 7193 2.504367 ACAAAGCACGCAGGTTAGAAT 58.496 42.857 0.00 0.00 36.83 2.40
4864 7194 2.484264 ACAAAGCACGCAGGTTAGAATC 59.516 45.455 0.00 0.00 36.83 2.52
4865 7195 1.359848 AAGCACGCAGGTTAGAATCG 58.640 50.000 0.00 0.00 35.88 3.34
4866 7196 0.530744 AGCACGCAGGTTAGAATCGA 59.469 50.000 0.00 0.00 0.00 3.59
4867 7197 0.645868 GCACGCAGGTTAGAATCGAC 59.354 55.000 0.00 0.00 0.00 4.20
4868 7198 0.914551 CACGCAGGTTAGAATCGACG 59.085 55.000 0.00 0.00 0.00 5.12
4869 7199 0.806868 ACGCAGGTTAGAATCGACGA 59.193 50.000 0.00 0.00 0.00 4.20
4870 7200 1.200716 ACGCAGGTTAGAATCGACGAA 59.799 47.619 0.00 0.00 0.00 3.85
4871 7201 2.256174 CGCAGGTTAGAATCGACGAAA 58.744 47.619 0.00 0.00 0.00 3.46
4872 7202 2.027688 CGCAGGTTAGAATCGACGAAAC 59.972 50.000 0.00 1.24 0.00 2.78
4873 7203 2.347755 GCAGGTTAGAATCGACGAAACC 59.652 50.000 17.59 17.59 39.92 3.27
4874 7204 2.928116 CAGGTTAGAATCGACGAAACCC 59.072 50.000 20.34 7.97 40.39 4.11
4875 7205 2.093816 AGGTTAGAATCGACGAAACCCC 60.094 50.000 20.34 8.85 40.39 4.95
4876 7206 2.274437 GTTAGAATCGACGAAACCCCC 58.726 52.381 0.00 0.00 0.00 5.40
4877 7207 0.457035 TAGAATCGACGAAACCCCCG 59.543 55.000 0.00 0.00 0.00 5.73
4878 7208 1.079612 GAATCGACGAAACCCCCGT 60.080 57.895 0.00 0.00 43.56 5.28
4882 7212 2.431430 GACGAAACCCCCGTCGAC 60.431 66.667 5.18 5.18 45.23 4.20
4883 7213 2.914097 ACGAAACCCCCGTCGACT 60.914 61.111 14.70 0.00 39.64 4.18
4884 7214 2.431942 CGAAACCCCCGTCGACTG 60.432 66.667 14.70 7.04 39.64 3.51
4885 7215 2.739132 GAAACCCCCGTCGACTGT 59.261 61.111 14.70 2.60 0.00 3.55
4886 7216 1.373873 GAAACCCCCGTCGACTGTC 60.374 63.158 14.70 0.00 0.00 3.51
4887 7217 2.091102 GAAACCCCCGTCGACTGTCA 62.091 60.000 14.70 0.00 0.00 3.58
4888 7218 2.373434 AAACCCCCGTCGACTGTCAC 62.373 60.000 14.70 4.70 0.00 3.67
4889 7219 3.299977 CCCCCGTCGACTGTCACA 61.300 66.667 14.70 0.00 0.00 3.58
4890 7220 2.646175 CCCCCGTCGACTGTCACAT 61.646 63.158 14.70 0.00 0.00 3.21
4891 7221 1.446099 CCCCGTCGACTGTCACATG 60.446 63.158 14.70 0.00 0.00 3.21
4892 7222 2.094659 CCCGTCGACTGTCACATGC 61.095 63.158 14.70 0.00 0.00 4.06
4893 7223 1.080501 CCGTCGACTGTCACATGCT 60.081 57.895 14.70 0.00 0.00 3.79
4894 7224 1.073216 CCGTCGACTGTCACATGCTC 61.073 60.000 14.70 0.00 0.00 4.26
4895 7225 0.387239 CGTCGACTGTCACATGCTCA 60.387 55.000 14.70 0.00 0.00 4.26
4896 7226 1.783284 GTCGACTGTCACATGCTCAA 58.217 50.000 8.70 0.00 0.00 3.02
4897 7227 2.341257 GTCGACTGTCACATGCTCAAT 58.659 47.619 8.70 0.00 0.00 2.57
4898 7228 2.738846 GTCGACTGTCACATGCTCAATT 59.261 45.455 8.70 0.00 0.00 2.32
4899 7229 3.187227 GTCGACTGTCACATGCTCAATTT 59.813 43.478 8.70 0.00 0.00 1.82
4900 7230 3.814842 TCGACTGTCACATGCTCAATTTT 59.185 39.130 8.73 0.00 0.00 1.82
4901 7231 4.083855 TCGACTGTCACATGCTCAATTTTC 60.084 41.667 8.73 0.00 0.00 2.29
4902 7232 4.479619 GACTGTCACATGCTCAATTTTCC 58.520 43.478 2.24 0.00 0.00 3.13
4903 7233 3.256631 ACTGTCACATGCTCAATTTTCCC 59.743 43.478 0.00 0.00 0.00 3.97
4904 7234 3.499338 TGTCACATGCTCAATTTTCCCT 58.501 40.909 0.00 0.00 0.00 4.20
4905 7235 3.896888 TGTCACATGCTCAATTTTCCCTT 59.103 39.130 0.00 0.00 0.00 3.95
4906 7236 4.240096 GTCACATGCTCAATTTTCCCTTG 58.760 43.478 0.00 0.00 0.00 3.61
4907 7237 3.896888 TCACATGCTCAATTTTCCCTTGT 59.103 39.130 0.00 0.00 0.00 3.16
4908 7238 4.344679 TCACATGCTCAATTTTCCCTTGTT 59.655 37.500 0.00 0.00 0.00 2.83
4909 7239 4.449743 CACATGCTCAATTTTCCCTTGTTG 59.550 41.667 0.00 0.00 0.00 3.33
4910 7240 3.110447 TGCTCAATTTTCCCTTGTTGC 57.890 42.857 0.00 0.00 0.00 4.17
4911 7241 2.699846 TGCTCAATTTTCCCTTGTTGCT 59.300 40.909 0.00 0.00 0.00 3.91
4912 7242 3.062042 GCTCAATTTTCCCTTGTTGCTG 58.938 45.455 0.00 0.00 0.00 4.41
4913 7243 3.062042 CTCAATTTTCCCTTGTTGCTGC 58.938 45.455 0.00 0.00 0.00 5.25
4914 7244 2.699846 TCAATTTTCCCTTGTTGCTGCT 59.300 40.909 0.00 0.00 0.00 4.24
4915 7245 3.894427 TCAATTTTCCCTTGTTGCTGCTA 59.106 39.130 0.00 0.00 0.00 3.49
4916 7246 4.343526 TCAATTTTCCCTTGTTGCTGCTAA 59.656 37.500 0.00 0.00 0.00 3.09
4917 7247 4.525912 ATTTTCCCTTGTTGCTGCTAAG 57.474 40.909 0.00 3.27 0.00 2.18
4918 7248 2.949177 TTCCCTTGTTGCTGCTAAGA 57.051 45.000 0.00 0.00 0.00 2.10
4919 7249 3.439857 TTCCCTTGTTGCTGCTAAGAT 57.560 42.857 0.00 0.00 0.00 2.40
4920 7250 4.568072 TTCCCTTGTTGCTGCTAAGATA 57.432 40.909 0.00 0.00 0.00 1.98
4921 7251 4.568072 TCCCTTGTTGCTGCTAAGATAA 57.432 40.909 0.00 0.00 0.00 1.75
4926 7256 3.466836 TGTTGCTGCTAAGATAATCCCG 58.533 45.455 0.00 0.00 0.00 5.14
4938 7268 6.927294 AAGATAATCCCGTGAATCTTCAAC 57.073 37.500 0.00 0.00 39.21 3.18
4943 7273 3.664107 TCCCGTGAATCTTCAACTTCAG 58.336 45.455 0.00 0.00 39.21 3.02
4953 7283 9.300681 TGAATCTTCAACTTCAGTTCCAATAAT 57.699 29.630 0.00 0.00 35.83 1.28
4956 7286 8.690203 TCTTCAACTTCAGTTCCAATAATCAA 57.310 30.769 0.00 0.00 35.83 2.57
4975 7305 1.972872 ACCACTCAGTTTGCCTCTTG 58.027 50.000 0.00 0.00 0.00 3.02
5006 7336 8.948631 ATTCGTTCATGTACAAGACTGAATAT 57.051 30.769 18.28 9.20 31.92 1.28
5034 7364 7.918643 AGTTGTTTTCAAATTGGCAAAGTATG 58.081 30.769 3.01 1.28 41.76 2.39
5050 7380 8.971321 GGCAAAGTATGTTTATTCATATGCAAG 58.029 33.333 0.00 0.00 36.43 4.01
5051 7381 9.520204 GCAAAGTATGTTTATTCATATGCAAGT 57.480 29.630 0.00 0.00 35.59 3.16
5069 7399 5.152923 CAAGTATGCAACTAGATGCTGTG 57.847 43.478 23.46 11.46 46.54 3.66
5070 7400 4.743057 AGTATGCAACTAGATGCTGTGA 57.257 40.909 23.46 5.92 46.54 3.58
5071 7401 4.437239 AGTATGCAACTAGATGCTGTGAC 58.563 43.478 23.46 15.54 46.54 3.67
5072 7402 2.837532 TGCAACTAGATGCTGTGACA 57.162 45.000 23.46 1.70 46.54 3.58
5086 7416 4.821260 TGCTGTGACAAACAACATGTAGAT 59.179 37.500 0.00 0.00 38.67 1.98
5092 7422 7.443879 TGTGACAAACAACATGTAGATACACAT 59.556 33.333 0.00 0.00 36.26 3.21
5108 7438 3.744660 ACACATCTCAAGGGTTCTTCAC 58.255 45.455 0.00 0.00 0.00 3.18
5111 7441 2.526304 TCTCAAGGGTTCTTCACACG 57.474 50.000 0.00 0.00 31.81 4.49
5116 7446 2.457366 AGGGTTCTTCACACGATGTC 57.543 50.000 0.00 0.00 31.81 3.06
5119 7449 2.615493 GGGTTCTTCACACGATGTCCAT 60.615 50.000 0.00 0.00 0.00 3.41
5122 7452 3.676291 TCTTCACACGATGTCCATGAA 57.324 42.857 0.00 0.00 0.00 2.57
5128 7458 4.081697 TCACACGATGTCCATGAATACAGT 60.082 41.667 0.00 0.00 0.00 3.55
5132 7462 6.040955 ACACGATGTCCATGAATACAGTAGAT 59.959 38.462 0.00 0.00 0.00 1.98
5134 7464 7.752686 CACGATGTCCATGAATACAGTAGATAG 59.247 40.741 0.00 0.00 0.00 2.08
5136 7466 6.013842 TGTCCATGAATACAGTAGATAGCG 57.986 41.667 0.00 0.00 0.00 4.26
5137 7467 5.048013 TGTCCATGAATACAGTAGATAGCGG 60.048 44.000 0.00 0.00 0.00 5.52
5138 7468 5.183331 GTCCATGAATACAGTAGATAGCGGA 59.817 44.000 0.00 0.00 0.00 5.54
5160 7490 6.017934 CGGAGTTTCATTCTTTCTTCTTCACA 60.018 38.462 0.00 0.00 0.00 3.58
5169 7499 6.436843 TCTTTCTTCTTCACAACAAGAACC 57.563 37.500 0.00 0.00 37.45 3.62
5178 7508 0.310854 CAACAAGAACCGGGCACTTC 59.689 55.000 6.32 0.00 0.00 3.01
5248 7583 6.514541 GCAGTAGCAATATCAGCAATCACATT 60.515 38.462 3.33 0.00 41.58 2.71
5258 7593 5.559770 TCAGCAATCACATTAGTTGGAGAA 58.440 37.500 0.00 0.00 0.00 2.87
5261 7596 6.149973 CAGCAATCACATTAGTTGGAGAAGAA 59.850 38.462 0.00 0.00 0.00 2.52
5262 7597 6.373774 AGCAATCACATTAGTTGGAGAAGAAG 59.626 38.462 0.00 0.00 0.00 2.85
5263 7598 6.404074 GCAATCACATTAGTTGGAGAAGAAGG 60.404 42.308 0.00 0.00 0.00 3.46
5264 7599 6.627087 ATCACATTAGTTGGAGAAGAAGGA 57.373 37.500 0.00 0.00 0.00 3.36
5266 7601 6.231211 TCACATTAGTTGGAGAAGAAGGAAC 58.769 40.000 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 1.690985 CTCCCTTCCCCTCTGTCCC 60.691 68.421 0.00 0.00 0.00 4.46
133 141 3.114616 CTGCCTCGTTGCGTCCAG 61.115 66.667 0.00 0.00 0.00 3.86
140 148 4.170062 CATGCCGCTGCCTCGTTG 62.170 66.667 0.00 0.00 36.33 4.10
141 149 4.704833 ACATGCCGCTGCCTCGTT 62.705 61.111 0.00 0.00 36.33 3.85
244 286 1.399440 GCATGCACCATGTCTACAGTG 59.601 52.381 14.21 0.00 43.10 3.66
316 365 2.126228 CGTGCCGGAGCGACTAAA 60.126 61.111 5.05 0.00 44.31 1.85
415 464 1.661112 GCTAGGAGTACTTGCTTTGCG 59.339 52.381 1.04 0.00 43.35 4.85
526 610 7.880624 CGTTTTTCGTTGATTTCTTTCTTCAA 58.119 30.769 0.00 0.00 34.52 2.69
553 637 8.131100 CGATGAGCACTTGTGGATTTATTTATT 58.869 33.333 2.81 0.00 0.00 1.40
554 638 7.498900 TCGATGAGCACTTGTGGATTTATTTAT 59.501 33.333 2.81 0.00 0.00 1.40
687 772 1.180456 TCGTGGACTCCAGCCGTTTA 61.180 55.000 0.00 0.00 32.34 2.01
721 966 1.660607 CGATGTGAACGGGAACATGAG 59.339 52.381 0.00 0.00 37.15 2.90
787 1032 0.643822 TATAGGACCGGGGAAGGGTT 59.356 55.000 6.32 0.00 38.07 4.11
789 1034 2.934263 TATATAGGACCGGGGAAGGG 57.066 55.000 6.32 0.00 35.02 3.95
793 1038 2.174210 CGAGGATATATAGGACCGGGGA 59.826 54.545 6.32 0.00 0.00 4.81
794 1039 2.584236 CGAGGATATATAGGACCGGGG 58.416 57.143 6.32 0.00 0.00 5.73
795 1040 1.955080 GCGAGGATATATAGGACCGGG 59.045 57.143 6.32 0.00 0.00 5.73
985 1250 2.398554 CCATTGCCGGTCGAACAGG 61.399 63.158 1.90 3.93 36.48 4.00
986 1251 3.039202 GCCATTGCCGGTCGAACAG 62.039 63.158 1.90 0.00 0.00 3.16
1182 1447 1.219393 GTGGAAGAAGAGGCGGAGG 59.781 63.158 0.00 0.00 0.00 4.30
1225 1490 1.546476 GAGCAAGAAGGGAAGAGACGA 59.454 52.381 0.00 0.00 0.00 4.20
1509 1778 1.440618 TGGCTGAAGTGGTAAAGGGA 58.559 50.000 0.00 0.00 0.00 4.20
1510 1779 2.369394 GATGGCTGAAGTGGTAAAGGG 58.631 52.381 0.00 0.00 0.00 3.95
1515 1796 1.479323 GGTACGATGGCTGAAGTGGTA 59.521 52.381 0.00 0.00 0.00 3.25
1516 1797 0.249398 GGTACGATGGCTGAAGTGGT 59.751 55.000 0.00 0.00 0.00 4.16
1536 1817 2.959372 GGCCCTTGTTTACACGGC 59.041 61.111 10.35 10.35 39.56 5.68
1588 1870 2.640421 CGCTCTAGCTCCCTACGC 59.360 66.667 0.00 0.00 39.32 4.42
1589 1871 2.262303 CCCGCTCTAGCTCCCTACG 61.262 68.421 0.00 0.00 39.32 3.51
1658 1940 1.135315 CCAGGACTTGCGCATTTCG 59.865 57.895 12.75 2.62 42.12 3.46
1708 1990 1.000646 GGGTCACGGAGGAGAGAGT 60.001 63.158 0.00 0.00 0.00 3.24
1847 2259 3.450578 CGCGGTGCCTATCTAAAAAGTA 58.549 45.455 0.00 0.00 0.00 2.24
1979 2772 4.899239 CGATCGAGCCACCCTGCC 62.899 72.222 10.26 0.00 0.00 4.85
2209 3594 2.743636 TCTCATTTCAGGTCACGTCC 57.256 50.000 0.00 0.00 0.00 4.79
2317 3707 4.602259 ACACAGGCACCCGTCACG 62.602 66.667 0.00 0.00 0.00 4.35
2318 3708 2.665185 GACACAGGCACCCGTCAC 60.665 66.667 0.00 0.00 0.00 3.67
2320 3710 2.357517 CAGACACAGGCACCCGTC 60.358 66.667 0.00 0.00 0.00 4.79
2321 3711 3.161450 ACAGACACAGGCACCCGT 61.161 61.111 0.00 0.00 0.00 5.28
2323 3713 1.302033 CTCACAGACACAGGCACCC 60.302 63.158 0.00 0.00 0.00 4.61
2325 3715 0.601311 GTCCTCACAGACACAGGCAC 60.601 60.000 0.00 0.00 36.73 5.01
2326 3716 1.748403 GTCCTCACAGACACAGGCA 59.252 57.895 0.00 0.00 36.73 4.75
2328 3718 1.373497 GCGTCCTCACAGACACAGG 60.373 63.158 0.00 0.00 36.52 4.00
2334 3743 2.601666 AGGCAGCGTCCTCACAGA 60.602 61.111 0.00 0.00 0.00 3.41
2386 3798 4.324267 ACTCTACGGAATGGAAACTTTGG 58.676 43.478 0.00 0.00 0.00 3.28
2459 3871 3.458779 GAGGAGCACTCGTATCGTATC 57.541 52.381 0.00 0.00 36.29 2.24
2505 3917 4.437587 CAGCAGGGAAGGGGCCTG 62.438 72.222 0.84 0.00 34.99 4.85
2508 3920 1.979155 GTTTCAGCAGGGAAGGGGC 60.979 63.158 0.00 0.00 0.00 5.80
2509 3921 0.322906 GAGTTTCAGCAGGGAAGGGG 60.323 60.000 0.00 0.00 0.00 4.79
2510 3922 0.695347 AGAGTTTCAGCAGGGAAGGG 59.305 55.000 0.00 0.00 0.00 3.95
2511 3923 1.072965 ACAGAGTTTCAGCAGGGAAGG 59.927 52.381 0.00 0.00 0.00 3.46
2512 3924 2.224378 TGACAGAGTTTCAGCAGGGAAG 60.224 50.000 0.00 0.00 0.00 3.46
2563 3975 4.805140 TGCATTCCCATGGTAATCCTTA 57.195 40.909 11.73 0.00 34.23 2.69
2577 3989 2.791004 GCAGCGATTTGTATTGCATTCC 59.209 45.455 0.00 0.00 42.66 3.01
2580 3992 2.684374 TCAGCAGCGATTTGTATTGCAT 59.316 40.909 0.00 0.00 42.66 3.96
2589 4001 2.221169 TGAACTTGTCAGCAGCGATTT 58.779 42.857 0.00 0.00 0.00 2.17
2595 4007 3.734231 CAGCAAAATGAACTTGTCAGCAG 59.266 43.478 0.00 0.00 40.43 4.24
2611 4023 5.530915 AGTCTACAATAACAACAGCAGCAAA 59.469 36.000 0.00 0.00 0.00 3.68
2614 4026 4.142816 CCAGTCTACAATAACAACAGCAGC 60.143 45.833 0.00 0.00 0.00 5.25
2617 4029 3.181520 CGCCAGTCTACAATAACAACAGC 60.182 47.826 0.00 0.00 0.00 4.40
2620 4032 2.676342 CCCGCCAGTCTACAATAACAAC 59.324 50.000 0.00 0.00 0.00 3.32
2814 4354 2.722201 CGACGGAAGGAAGGGAGGG 61.722 68.421 0.00 0.00 0.00 4.30
2818 4358 1.080025 GTGACGACGGAAGGAAGGG 60.080 63.158 0.00 0.00 0.00 3.95
2828 4368 2.049433 GGAGGTGTGGTGACGACG 60.049 66.667 0.00 0.00 0.00 5.12
2829 4369 1.289380 GAGGAGGTGTGGTGACGAC 59.711 63.158 0.00 0.00 0.00 4.34
2830 4370 2.265904 CGAGGAGGTGTGGTGACGA 61.266 63.158 0.00 0.00 0.00 4.20
2831 4371 2.258591 CGAGGAGGTGTGGTGACG 59.741 66.667 0.00 0.00 0.00 4.35
2832 4372 2.048127 GCGAGGAGGTGTGGTGAC 60.048 66.667 0.00 0.00 0.00 3.67
2833 4373 1.480212 AATGCGAGGAGGTGTGGTGA 61.480 55.000 0.00 0.00 0.00 4.02
2834 4374 1.003355 AATGCGAGGAGGTGTGGTG 60.003 57.895 0.00 0.00 0.00 4.17
2835 4375 1.296715 GAATGCGAGGAGGTGTGGT 59.703 57.895 0.00 0.00 0.00 4.16
2837 4377 2.456119 GCGAATGCGAGGAGGTGTG 61.456 63.158 0.00 0.00 40.82 3.82
2838 4378 2.125512 GCGAATGCGAGGAGGTGT 60.126 61.111 0.00 0.00 40.82 4.16
2849 4389 2.554806 AATCACTGTGCATGCGAATG 57.445 45.000 14.09 8.85 0.00 2.67
2850 4390 4.395854 TCTTTAATCACTGTGCATGCGAAT 59.604 37.500 14.09 0.00 0.00 3.34
2851 4391 3.750652 TCTTTAATCACTGTGCATGCGAA 59.249 39.130 14.09 2.23 0.00 4.70
2852 4392 3.333804 TCTTTAATCACTGTGCATGCGA 58.666 40.909 14.09 3.74 0.00 5.10
2853 4393 3.745332 TCTTTAATCACTGTGCATGCG 57.255 42.857 14.09 0.76 0.00 4.73
2854 4394 5.039333 GGAATCTTTAATCACTGTGCATGC 58.961 41.667 11.82 11.82 0.00 4.06
2855 4395 6.446781 AGGAATCTTTAATCACTGTGCATG 57.553 37.500 2.12 0.00 0.00 4.06
2856 4396 5.295292 CGAGGAATCTTTAATCACTGTGCAT 59.705 40.000 2.12 0.00 0.00 3.96
2857 4397 4.631377 CGAGGAATCTTTAATCACTGTGCA 59.369 41.667 2.12 0.00 0.00 4.57
2858 4398 4.631813 ACGAGGAATCTTTAATCACTGTGC 59.368 41.667 2.12 0.00 0.00 4.57
2859 4399 6.727824 AACGAGGAATCTTTAATCACTGTG 57.272 37.500 0.17 0.17 0.00 3.66
2860 4400 6.535508 GCTAACGAGGAATCTTTAATCACTGT 59.464 38.462 0.00 0.00 0.00 3.55
2861 4401 6.291849 CGCTAACGAGGAATCTTTAATCACTG 60.292 42.308 0.00 0.00 43.93 3.66
2862 4402 5.749109 CGCTAACGAGGAATCTTTAATCACT 59.251 40.000 0.00 0.00 43.93 3.41
2863 4403 5.519206 ACGCTAACGAGGAATCTTTAATCAC 59.481 40.000 0.00 0.00 43.93 3.06
2864 4404 5.657474 ACGCTAACGAGGAATCTTTAATCA 58.343 37.500 0.00 0.00 43.93 2.57
2865 4405 6.585389 AACGCTAACGAGGAATCTTTAATC 57.415 37.500 0.00 0.00 43.93 1.75
2866 4406 6.674760 GCAAACGCTAACGAGGAATCTTTAAT 60.675 38.462 0.00 0.00 43.93 1.40
2867 4407 5.390145 GCAAACGCTAACGAGGAATCTTTAA 60.390 40.000 0.00 0.00 43.93 1.52
2868 4408 4.092383 GCAAACGCTAACGAGGAATCTTTA 59.908 41.667 0.00 0.00 43.93 1.85
2869 4409 3.120304 GCAAACGCTAACGAGGAATCTTT 60.120 43.478 0.00 0.00 43.93 2.52
2870 4410 2.415512 GCAAACGCTAACGAGGAATCTT 59.584 45.455 0.00 0.00 43.93 2.40
2871 4411 2.000447 GCAAACGCTAACGAGGAATCT 59.000 47.619 0.00 0.00 43.93 2.40
2872 4412 1.730064 TGCAAACGCTAACGAGGAATC 59.270 47.619 0.00 0.00 43.93 2.52
2873 4413 1.463444 GTGCAAACGCTAACGAGGAAT 59.537 47.619 0.00 0.00 43.93 3.01
2874 4414 0.863144 GTGCAAACGCTAACGAGGAA 59.137 50.000 0.00 0.00 43.93 3.36
2875 4415 0.947180 GGTGCAAACGCTAACGAGGA 60.947 55.000 0.00 0.00 43.93 3.71
2876 4416 1.495951 GGTGCAAACGCTAACGAGG 59.504 57.895 0.00 0.00 43.93 4.63
2877 4417 1.129809 CGGTGCAAACGCTAACGAG 59.870 57.895 0.00 0.00 43.93 4.18
2903 4443 7.549488 ACCTACTGCTTACTGAATGTTGAATAC 59.451 37.037 0.00 0.00 0.00 1.89
2908 4448 5.700832 TCAACCTACTGCTTACTGAATGTTG 59.299 40.000 0.00 0.00 0.00 3.33
2909 4449 5.865085 TCAACCTACTGCTTACTGAATGTT 58.135 37.500 0.00 0.00 0.00 2.71
2911 4451 5.233050 CGATCAACCTACTGCTTACTGAATG 59.767 44.000 0.00 0.00 0.00 2.67
2912 4452 5.352284 CGATCAACCTACTGCTTACTGAAT 58.648 41.667 0.00 0.00 0.00 2.57
2913 4453 4.744570 CGATCAACCTACTGCTTACTGAA 58.255 43.478 0.00 0.00 0.00 3.02
2915 4455 2.860735 GCGATCAACCTACTGCTTACTG 59.139 50.000 0.00 0.00 0.00 2.74
2916 4456 2.496070 TGCGATCAACCTACTGCTTACT 59.504 45.455 0.00 0.00 0.00 2.24
2917 4457 2.860735 CTGCGATCAACCTACTGCTTAC 59.139 50.000 0.00 0.00 0.00 2.34
2918 4458 2.738643 GCTGCGATCAACCTACTGCTTA 60.739 50.000 0.00 0.00 0.00 3.09
2919 4459 2.009042 GCTGCGATCAACCTACTGCTT 61.009 52.381 0.00 0.00 0.00 3.91
2920 4460 0.460987 GCTGCGATCAACCTACTGCT 60.461 55.000 0.00 0.00 0.00 4.24
2921 4461 1.756375 CGCTGCGATCAACCTACTGC 61.756 60.000 18.66 0.00 0.00 4.40
2922 4462 1.756375 GCGCTGCGATCAACCTACTG 61.756 60.000 28.07 0.00 0.00 2.74
3022 4577 0.038892 GGAAATGCAGTGCAGTGTGG 60.039 55.000 24.20 0.00 43.65 4.17
3028 4583 2.877097 TAAGAGGGAAATGCAGTGCA 57.123 45.000 22.22 22.22 44.86 4.57
3041 4596 6.969473 GGCTCTTTTCATCGAAAAATAAGAGG 59.031 38.462 19.89 9.27 40.34 3.69
3044 4599 6.969473 GGAGGCTCTTTTCATCGAAAAATAAG 59.031 38.462 15.23 0.00 40.34 1.73
3073 4631 6.720012 ACTTTCGAAGCAAACAAAACAAAT 57.280 29.167 0.00 0.00 0.00 2.32
3076 4634 6.184580 TCTACTTTCGAAGCAAACAAAACA 57.815 33.333 0.00 0.00 0.00 2.83
3149 4707 1.895131 TGCAAAAGAGGCCTCCATTTC 59.105 47.619 29.54 18.22 0.00 2.17
3171 4729 1.761198 GTAGATTCCGGGCCTGTTACT 59.239 52.381 11.58 6.91 0.00 2.24
3208 4767 4.756642 CAGGAAACAGCACATGACTTTCTA 59.243 41.667 0.00 0.00 29.19 2.10
3228 4787 6.945938 ACTTGCTAGTAGTACTATGTCAGG 57.054 41.667 10.46 11.11 31.21 3.86
3340 4900 2.899838 TGTCTTGTGTGCCCGTGC 60.900 61.111 0.00 0.00 38.26 5.34
3438 5130 1.143813 CATCATAGGGTGGGCCTTCT 58.856 55.000 4.53 1.89 34.45 2.85
3482 5174 6.294176 CCAGTTTAGTCAAAAGTTGCTGCTAT 60.294 38.462 0.00 0.00 0.00 2.97
3489 5181 4.647424 TGGCCAGTTTAGTCAAAAGTTG 57.353 40.909 0.00 0.00 0.00 3.16
3530 5222 1.521450 CCTGCCTGCACAGTCCTTTG 61.521 60.000 3.87 0.00 35.83 2.77
3738 6005 6.018507 TCAGTTTTACGGTTTTGCTAAGTCTC 60.019 38.462 0.00 0.00 0.00 3.36
3740 6007 6.051646 TCAGTTTTACGGTTTTGCTAAGTC 57.948 37.500 0.00 0.00 0.00 3.01
3750 6017 6.505044 AAACAGTTCTTCAGTTTTACGGTT 57.495 33.333 0.00 0.00 33.12 4.44
3752 6019 6.782150 AGAAAACAGTTCTTCAGTTTTACGG 58.218 36.000 0.00 0.00 42.72 4.02
3753 6020 7.461107 TGAGAAAACAGTTCTTCAGTTTTACG 58.539 34.615 0.00 0.00 42.72 3.18
3826 6095 3.626028 AGGCACGAAACAGATTCAAAC 57.374 42.857 0.00 0.00 37.96 2.93
3848 6117 6.486657 ACCTGTGGCATATATGTAACACAATC 59.513 38.462 25.62 10.72 37.99 2.67
4288 6566 3.636043 CACACACACGACCGCACC 61.636 66.667 0.00 0.00 0.00 5.01
4291 6569 1.850640 CTAACACACACACGACCGC 59.149 57.895 0.00 0.00 0.00 5.68
4310 6599 2.808206 CCTAGCTACGGGCCCAAGG 61.808 68.421 24.92 13.75 43.05 3.61
4317 6606 0.899720 TTCACCAACCTAGCTACGGG 59.100 55.000 12.18 5.95 0.00 5.28
4396 6704 2.410392 CACAAAACGTAGCGTATGAGCA 59.590 45.455 12.14 0.00 39.99 4.26
4432 6744 2.101917 CACATCCCCATCAAAGAATGGC 59.898 50.000 0.00 0.00 44.17 4.40
4465 6778 8.988934 CAGCGTAATTACCATGTGACTAATAAT 58.011 33.333 10.01 0.00 0.00 1.28
4467 6780 7.718525 TCAGCGTAATTACCATGTGACTAATA 58.281 34.615 10.01 0.00 0.00 0.98
4468 6781 6.578944 TCAGCGTAATTACCATGTGACTAAT 58.421 36.000 10.01 0.00 0.00 1.73
4514 6844 2.218603 ACGAACACCACTTTCACATCC 58.781 47.619 0.00 0.00 0.00 3.51
4516 6846 3.181491 CCAAACGAACACCACTTTCACAT 60.181 43.478 0.00 0.00 0.00 3.21
4539 6869 0.593128 AAAGACAGGCATGTTGCGAC 59.407 50.000 5.07 0.00 46.21 5.19
4542 6872 0.037975 CCCAAAGACAGGCATGTTGC 60.038 55.000 5.07 0.00 40.68 4.17
4550 6880 0.251341 CCTGGAACCCCAAAGACAGG 60.251 60.000 0.00 0.00 42.98 4.00
4554 6884 1.144913 CTGAACCTGGAACCCCAAAGA 59.855 52.381 0.00 0.00 42.98 2.52
4561 6891 1.726853 CGATCACTGAACCTGGAACC 58.273 55.000 0.00 0.00 0.00 3.62
4577 6907 4.281941 TGAGCTATCTATGTTCCAAGCGAT 59.718 41.667 0.00 0.00 35.17 4.58
4588 6918 8.604640 AAACTGATTGACATGAGCTATCTATG 57.395 34.615 0.00 0.00 0.00 2.23
4590 6920 9.920133 GATAAACTGATTGACATGAGCTATCTA 57.080 33.333 0.00 0.00 0.00 1.98
4591 6921 8.649591 AGATAAACTGATTGACATGAGCTATCT 58.350 33.333 0.00 0.00 0.00 1.98
4597 6927 6.820152 TGTGGAGATAAACTGATTGACATGAG 59.180 38.462 0.00 0.00 0.00 2.90
4632 6962 3.430929 GGAGGTCTGTGATTGCTACGAAT 60.431 47.826 0.00 0.00 0.00 3.34
4633 6963 2.094182 GGAGGTCTGTGATTGCTACGAA 60.094 50.000 0.00 0.00 0.00 3.85
4636 6966 1.555075 TGGGAGGTCTGTGATTGCTAC 59.445 52.381 0.00 0.00 0.00 3.58
4640 6970 3.077484 ACAATGGGAGGTCTGTGATTG 57.923 47.619 0.00 0.00 0.00 2.67
4650 6980 1.534338 AAGGGGGATACAATGGGAGG 58.466 55.000 0.00 0.00 39.74 4.30
4653 6983 2.561478 CGTAAGGGGGATACAATGGG 57.439 55.000 0.00 0.00 39.74 4.00
4667 6997 2.921754 GGTTGTTCGATCAGTCCGTAAG 59.078 50.000 0.00 0.00 0.00 2.34
4670 7000 0.677288 TGGTTGTTCGATCAGTCCGT 59.323 50.000 12.08 0.00 0.00 4.69
4671 7001 1.350193 CTGGTTGTTCGATCAGTCCG 58.650 55.000 12.08 0.00 0.00 4.79
4672 7002 1.002087 ACCTGGTTGTTCGATCAGTCC 59.998 52.381 0.00 10.76 0.00 3.85
4673 7003 2.069273 CACCTGGTTGTTCGATCAGTC 58.931 52.381 0.00 0.00 0.00 3.51
4674 7004 1.691976 TCACCTGGTTGTTCGATCAGT 59.308 47.619 0.00 0.00 0.00 3.41
4675 7005 2.069273 GTCACCTGGTTGTTCGATCAG 58.931 52.381 0.00 0.00 0.00 2.90
4676 7006 1.270625 GGTCACCTGGTTGTTCGATCA 60.271 52.381 0.00 0.00 0.00 2.92
4677 7007 1.270625 TGGTCACCTGGTTGTTCGATC 60.271 52.381 0.00 0.00 0.00 3.69
4679 7009 0.105964 CTGGTCACCTGGTTGTTCGA 59.894 55.000 0.00 0.00 0.00 3.71
4680 7010 0.179056 ACTGGTCACCTGGTTGTTCG 60.179 55.000 5.59 0.00 0.00 3.95
4681 7011 2.367567 TCTACTGGTCACCTGGTTGTTC 59.632 50.000 5.59 0.00 0.00 3.18
4682 7012 2.368875 CTCTACTGGTCACCTGGTTGTT 59.631 50.000 5.59 0.00 0.00 2.83
4683 7013 1.971357 CTCTACTGGTCACCTGGTTGT 59.029 52.381 5.59 0.00 0.00 3.32
4684 7014 1.338200 GCTCTACTGGTCACCTGGTTG 60.338 57.143 5.59 1.14 0.00 3.77
4685 7015 0.977395 GCTCTACTGGTCACCTGGTT 59.023 55.000 5.59 0.00 0.00 3.67
4686 7016 0.115349 AGCTCTACTGGTCACCTGGT 59.885 55.000 5.59 0.00 0.00 4.00
4687 7017 0.820871 GAGCTCTACTGGTCACCTGG 59.179 60.000 6.43 0.00 34.88 4.45
4688 7018 0.820871 GGAGCTCTACTGGTCACCTG 59.179 60.000 14.64 0.00 36.30 4.00
4690 7020 1.205893 CTTGGAGCTCTACTGGTCACC 59.794 57.143 14.64 0.00 36.30 4.02
4692 7022 0.898320 GCTTGGAGCTCTACTGGTCA 59.102 55.000 14.64 0.00 38.45 4.02
4693 7023 3.750828 GCTTGGAGCTCTACTGGTC 57.249 57.895 14.64 0.00 38.45 4.02
4732 7062 2.767445 CGATGCACACAGCCATGGG 61.767 63.158 15.13 0.00 44.83 4.00
4733 7063 2.795973 CGATGCACACAGCCATGG 59.204 61.111 7.63 7.63 44.83 3.66
4734 7064 2.101575 GCGATGCACACAGCCATG 59.898 61.111 0.00 0.00 44.83 3.66
4739 7069 2.512286 ATCGGGCGATGCACACAG 60.512 61.111 0.00 0.00 32.98 3.66
4740 7070 2.819154 CATCGGGCGATGCACACA 60.819 61.111 0.00 0.00 44.27 3.72
4754 7084 5.851143 AGGATAACCCCTGCCTTTGCATC 62.851 52.174 0.00 0.00 41.39 3.91
4755 7085 4.045088 AGGATAACCCCTGCCTTTGCAT 62.045 50.000 0.00 0.00 41.39 3.96
4756 7086 2.751795 AGGATAACCCCTGCCTTTGCA 61.752 52.381 0.00 0.00 40.49 4.08
4757 7087 0.033109 AGGATAACCCCTGCCTTTGC 60.033 55.000 0.00 0.00 34.68 3.68
4758 7088 1.410224 GGAGGATAACCCCTGCCTTTG 60.410 57.143 0.00 0.00 38.55 2.77
4759 7089 0.927029 GGAGGATAACCCCTGCCTTT 59.073 55.000 0.00 0.00 38.55 3.11
4761 7091 0.046397 AAGGAGGATAACCCCTGCCT 59.954 55.000 0.00 0.00 44.66 4.75
4762 7092 0.927029 AAAGGAGGATAACCCCTGCC 59.073 55.000 0.00 0.00 44.66 4.85
4763 7093 2.656002 GAAAAGGAGGATAACCCCTGC 58.344 52.381 0.00 0.00 44.01 4.85
4764 7094 2.504175 TCGAAAAGGAGGATAACCCCTG 59.496 50.000 0.72 0.00 37.09 4.45
4765 7095 2.841795 TCGAAAAGGAGGATAACCCCT 58.158 47.619 0.00 0.00 38.08 4.79
4766 7096 3.199289 TCTTCGAAAAGGAGGATAACCCC 59.801 47.826 0.00 0.00 33.17 4.95
4767 7097 4.482952 TCTTCGAAAAGGAGGATAACCC 57.517 45.455 0.00 0.00 33.17 4.11
4768 7098 6.812879 TTTTCTTCGAAAAGGAGGATAACC 57.187 37.500 0.00 0.00 33.03 2.85
4806 7136 1.864029 GCGAACAGACTTTTTGGGCAC 60.864 52.381 0.00 0.00 0.00 5.01
4807 7137 0.383949 GCGAACAGACTTTTTGGGCA 59.616 50.000 0.00 0.00 0.00 5.36
4808 7138 0.383949 TGCGAACAGACTTTTTGGGC 59.616 50.000 0.00 0.00 0.00 5.36
4809 7139 2.543653 CCTTGCGAACAGACTTTTTGGG 60.544 50.000 0.00 0.00 0.00 4.12
4810 7140 2.731217 CCTTGCGAACAGACTTTTTGG 58.269 47.619 0.00 0.00 0.00 3.28
4811 7141 2.119457 GCCTTGCGAACAGACTTTTTG 58.881 47.619 0.00 0.00 0.00 2.44
4812 7142 1.748493 TGCCTTGCGAACAGACTTTTT 59.252 42.857 0.00 0.00 0.00 1.94
4813 7143 1.388547 TGCCTTGCGAACAGACTTTT 58.611 45.000 0.00 0.00 0.00 2.27
4814 7144 1.537202 GATGCCTTGCGAACAGACTTT 59.463 47.619 0.00 0.00 0.00 2.66
4815 7145 1.160137 GATGCCTTGCGAACAGACTT 58.840 50.000 0.00 0.00 0.00 3.01
4816 7146 1.016130 CGATGCCTTGCGAACAGACT 61.016 55.000 0.00 0.00 0.00 3.24
4817 7147 1.014044 TCGATGCCTTGCGAACAGAC 61.014 55.000 0.00 0.00 33.04 3.51
4818 7148 0.320334 TTCGATGCCTTGCGAACAGA 60.320 50.000 0.00 0.00 41.07 3.41
4819 7149 0.095935 CTTCGATGCCTTGCGAACAG 59.904 55.000 0.00 0.00 41.07 3.16
4820 7150 0.320334 TCTTCGATGCCTTGCGAACA 60.320 50.000 0.00 0.00 41.07 3.18
4821 7151 0.796312 TTCTTCGATGCCTTGCGAAC 59.204 50.000 0.00 0.00 41.07 3.95
4822 7152 1.078709 CTTCTTCGATGCCTTGCGAA 58.921 50.000 0.00 0.00 43.36 4.70
4823 7153 0.246360 TCTTCTTCGATGCCTTGCGA 59.754 50.000 0.00 0.00 34.32 5.10
4824 7154 1.078709 TTCTTCTTCGATGCCTTGCG 58.921 50.000 0.00 0.00 0.00 4.85
4825 7155 1.806542 TGTTCTTCTTCGATGCCTTGC 59.193 47.619 0.00 0.00 0.00 4.01
4826 7156 4.470462 CTTTGTTCTTCTTCGATGCCTTG 58.530 43.478 0.00 0.00 0.00 3.61
4827 7157 3.057946 GCTTTGTTCTTCTTCGATGCCTT 60.058 43.478 0.00 0.00 0.00 4.35
4828 7158 2.485814 GCTTTGTTCTTCTTCGATGCCT 59.514 45.455 0.00 0.00 0.00 4.75
4829 7159 2.226437 TGCTTTGTTCTTCTTCGATGCC 59.774 45.455 0.00 0.00 0.00 4.40
4830 7160 3.229552 GTGCTTTGTTCTTCTTCGATGC 58.770 45.455 0.00 0.00 0.00 3.91
4831 7161 3.473367 CGTGCTTTGTTCTTCTTCGATG 58.527 45.455 0.00 0.00 0.00 3.84
4832 7162 2.096218 GCGTGCTTTGTTCTTCTTCGAT 60.096 45.455 0.00 0.00 0.00 3.59
4833 7163 1.260561 GCGTGCTTTGTTCTTCTTCGA 59.739 47.619 0.00 0.00 0.00 3.71
4834 7164 1.003972 TGCGTGCTTTGTTCTTCTTCG 60.004 47.619 0.00 0.00 0.00 3.79
4835 7165 2.603173 CCTGCGTGCTTTGTTCTTCTTC 60.603 50.000 0.00 0.00 0.00 2.87
4836 7166 1.334869 CCTGCGTGCTTTGTTCTTCTT 59.665 47.619 0.00 0.00 0.00 2.52
4837 7167 0.947244 CCTGCGTGCTTTGTTCTTCT 59.053 50.000 0.00 0.00 0.00 2.85
4838 7168 0.663153 ACCTGCGTGCTTTGTTCTTC 59.337 50.000 0.00 0.00 0.00 2.87
4839 7169 1.102978 AACCTGCGTGCTTTGTTCTT 58.897 45.000 0.00 0.00 0.00 2.52
4840 7170 1.873591 CTAACCTGCGTGCTTTGTTCT 59.126 47.619 0.00 0.00 0.00 3.01
4841 7171 1.871039 TCTAACCTGCGTGCTTTGTTC 59.129 47.619 0.00 0.00 0.00 3.18
4842 7172 1.961793 TCTAACCTGCGTGCTTTGTT 58.038 45.000 0.00 0.00 0.00 2.83
4843 7173 1.961793 TTCTAACCTGCGTGCTTTGT 58.038 45.000 0.00 0.00 0.00 2.83
4844 7174 2.474526 CGATTCTAACCTGCGTGCTTTG 60.475 50.000 0.00 0.00 0.00 2.77
4845 7175 1.732259 CGATTCTAACCTGCGTGCTTT 59.268 47.619 0.00 0.00 0.00 3.51
4846 7176 1.067142 TCGATTCTAACCTGCGTGCTT 60.067 47.619 0.00 0.00 0.00 3.91
4847 7177 0.530744 TCGATTCTAACCTGCGTGCT 59.469 50.000 0.00 0.00 0.00 4.40
4848 7178 0.645868 GTCGATTCTAACCTGCGTGC 59.354 55.000 0.00 0.00 0.00 5.34
4849 7179 0.914551 CGTCGATTCTAACCTGCGTG 59.085 55.000 0.00 0.00 0.00 5.34
4850 7180 0.806868 TCGTCGATTCTAACCTGCGT 59.193 50.000 0.00 0.00 0.00 5.24
4851 7181 1.904144 TTCGTCGATTCTAACCTGCG 58.096 50.000 0.00 0.00 0.00 5.18
4852 7182 2.347755 GGTTTCGTCGATTCTAACCTGC 59.652 50.000 16.03 0.00 36.25 4.85
4853 7183 2.928116 GGGTTTCGTCGATTCTAACCTG 59.072 50.000 20.43 0.00 38.59 4.00
4854 7184 2.093816 GGGGTTTCGTCGATTCTAACCT 60.094 50.000 20.43 0.00 38.59 3.50
4855 7185 2.274437 GGGGTTTCGTCGATTCTAACC 58.726 52.381 15.30 15.30 37.98 2.85
4856 7186 2.274437 GGGGGTTTCGTCGATTCTAAC 58.726 52.381 0.00 0.00 0.00 2.34
4857 7187 1.135024 CGGGGGTTTCGTCGATTCTAA 60.135 52.381 0.00 0.00 0.00 2.10
4858 7188 0.457035 CGGGGGTTTCGTCGATTCTA 59.543 55.000 0.00 0.00 0.00 2.10
4859 7189 1.217244 CGGGGGTTTCGTCGATTCT 59.783 57.895 0.00 0.00 0.00 2.40
4860 7190 1.079612 ACGGGGGTTTCGTCGATTC 60.080 57.895 0.00 0.00 35.87 2.52
4861 7191 1.079612 GACGGGGGTTTCGTCGATT 60.080 57.895 0.00 0.00 45.53 3.34
4862 7192 2.575461 GACGGGGGTTTCGTCGAT 59.425 61.111 0.00 0.00 45.53 3.59
4866 7196 2.914097 AGTCGACGGGGGTTTCGT 60.914 61.111 10.46 0.00 44.03 3.85
4867 7197 2.431942 CAGTCGACGGGGGTTTCG 60.432 66.667 10.46 0.00 36.55 3.46
4868 7198 1.373873 GACAGTCGACGGGGGTTTC 60.374 63.158 19.84 4.21 0.00 2.78
4869 7199 2.135581 TGACAGTCGACGGGGGTTT 61.136 57.895 19.84 0.00 0.00 3.27
4870 7200 2.522436 TGACAGTCGACGGGGGTT 60.522 61.111 19.84 0.00 0.00 4.11
4871 7201 3.300765 GTGACAGTCGACGGGGGT 61.301 66.667 19.84 12.10 0.00 4.95
4872 7202 2.646175 ATGTGACAGTCGACGGGGG 61.646 63.158 19.84 9.04 0.00 5.40
4873 7203 1.446099 CATGTGACAGTCGACGGGG 60.446 63.158 19.84 11.47 0.00 5.73
4874 7204 2.094659 GCATGTGACAGTCGACGGG 61.095 63.158 19.84 13.94 0.00 5.28
4875 7205 1.073216 GAGCATGTGACAGTCGACGG 61.073 60.000 14.42 14.42 0.00 4.79
4876 7206 0.387239 TGAGCATGTGACAGTCGACG 60.387 55.000 10.46 7.86 0.00 5.12
4877 7207 1.783284 TTGAGCATGTGACAGTCGAC 58.217 50.000 7.70 7.70 0.00 4.20
4878 7208 2.749280 ATTGAGCATGTGACAGTCGA 57.251 45.000 0.00 0.00 0.00 4.20
4879 7209 3.818961 AAATTGAGCATGTGACAGTCG 57.181 42.857 0.00 0.00 0.00 4.18
4880 7210 4.479619 GGAAAATTGAGCATGTGACAGTC 58.520 43.478 0.00 0.00 0.00 3.51
4881 7211 3.256631 GGGAAAATTGAGCATGTGACAGT 59.743 43.478 0.00 0.00 0.00 3.55
4882 7212 3.508793 AGGGAAAATTGAGCATGTGACAG 59.491 43.478 0.00 0.00 0.00 3.51
4883 7213 3.499338 AGGGAAAATTGAGCATGTGACA 58.501 40.909 0.00 0.00 0.00 3.58
4884 7214 4.240096 CAAGGGAAAATTGAGCATGTGAC 58.760 43.478 0.00 0.00 0.00 3.67
4885 7215 3.896888 ACAAGGGAAAATTGAGCATGTGA 59.103 39.130 0.00 0.00 0.00 3.58
4886 7216 4.261578 ACAAGGGAAAATTGAGCATGTG 57.738 40.909 0.00 0.00 0.00 3.21
4887 7217 4.634199 CAACAAGGGAAAATTGAGCATGT 58.366 39.130 0.00 0.00 0.00 3.21
4888 7218 3.434299 GCAACAAGGGAAAATTGAGCATG 59.566 43.478 0.00 0.00 34.63 4.06
4889 7219 3.325716 AGCAACAAGGGAAAATTGAGCAT 59.674 39.130 9.27 0.00 35.90 3.79
4890 7220 2.699846 AGCAACAAGGGAAAATTGAGCA 59.300 40.909 9.27 0.00 35.90 4.26
4891 7221 3.062042 CAGCAACAAGGGAAAATTGAGC 58.938 45.455 0.00 0.00 34.67 4.26
4892 7222 3.062042 GCAGCAACAAGGGAAAATTGAG 58.938 45.455 0.00 0.00 0.00 3.02
4893 7223 2.699846 AGCAGCAACAAGGGAAAATTGA 59.300 40.909 0.00 0.00 0.00 2.57
4894 7224 3.116079 AGCAGCAACAAGGGAAAATTG 57.884 42.857 0.00 0.00 0.00 2.32
4895 7225 4.588528 TCTTAGCAGCAACAAGGGAAAATT 59.411 37.500 0.00 0.00 0.00 1.82
4896 7226 4.151883 TCTTAGCAGCAACAAGGGAAAAT 58.848 39.130 0.00 0.00 0.00 1.82
4897 7227 3.561143 TCTTAGCAGCAACAAGGGAAAA 58.439 40.909 0.00 0.00 0.00 2.29
4898 7228 3.222173 TCTTAGCAGCAACAAGGGAAA 57.778 42.857 0.00 0.00 0.00 3.13
4899 7229 2.949177 TCTTAGCAGCAACAAGGGAA 57.051 45.000 0.00 0.00 0.00 3.97
4900 7230 4.568072 TTATCTTAGCAGCAACAAGGGA 57.432 40.909 0.00 0.00 0.00 4.20
4901 7231 4.276926 GGATTATCTTAGCAGCAACAAGGG 59.723 45.833 0.00 0.00 0.00 3.95
4902 7232 4.276926 GGGATTATCTTAGCAGCAACAAGG 59.723 45.833 0.00 0.00 0.00 3.61
4903 7233 4.024556 CGGGATTATCTTAGCAGCAACAAG 60.025 45.833 0.00 0.00 0.00 3.16
4904 7234 3.876914 CGGGATTATCTTAGCAGCAACAA 59.123 43.478 0.00 0.00 0.00 2.83
4905 7235 3.118408 ACGGGATTATCTTAGCAGCAACA 60.118 43.478 0.00 0.00 0.00 3.33
4906 7236 3.248602 CACGGGATTATCTTAGCAGCAAC 59.751 47.826 0.00 0.00 0.00 4.17
4907 7237 3.133901 TCACGGGATTATCTTAGCAGCAA 59.866 43.478 0.00 0.00 0.00 3.91
4908 7238 2.698274 TCACGGGATTATCTTAGCAGCA 59.302 45.455 0.00 0.00 0.00 4.41
4909 7239 3.386768 TCACGGGATTATCTTAGCAGC 57.613 47.619 0.00 0.00 0.00 5.25
4910 7240 5.788450 AGATTCACGGGATTATCTTAGCAG 58.212 41.667 0.00 0.00 0.00 4.24
4911 7241 5.808366 AGATTCACGGGATTATCTTAGCA 57.192 39.130 0.00 0.00 0.00 3.49
4912 7242 6.223852 TGAAGATTCACGGGATTATCTTAGC 58.776 40.000 13.33 4.72 37.44 3.09
4913 7243 7.928706 AGTTGAAGATTCACGGGATTATCTTAG 59.071 37.037 13.33 0.00 37.44 2.18
4914 7244 7.792032 AGTTGAAGATTCACGGGATTATCTTA 58.208 34.615 13.33 0.00 37.44 2.10
4915 7245 6.653989 AGTTGAAGATTCACGGGATTATCTT 58.346 36.000 13.25 13.25 39.39 2.40
4916 7246 6.240549 AGTTGAAGATTCACGGGATTATCT 57.759 37.500 0.00 0.00 36.83 1.98
4917 7247 6.538742 TGAAGTTGAAGATTCACGGGATTATC 59.461 38.462 0.00 0.00 36.83 1.75
4918 7248 6.414732 TGAAGTTGAAGATTCACGGGATTAT 58.585 36.000 0.00 0.00 36.83 1.28
4919 7249 5.800296 TGAAGTTGAAGATTCACGGGATTA 58.200 37.500 0.00 0.00 36.83 1.75
4920 7250 4.651778 TGAAGTTGAAGATTCACGGGATT 58.348 39.130 0.00 0.00 36.83 3.01
4921 7251 4.256920 CTGAAGTTGAAGATTCACGGGAT 58.743 43.478 0.00 0.00 36.83 3.85
4926 7256 6.377327 TTGGAACTGAAGTTGAAGATTCAC 57.623 37.500 0.00 0.00 38.56 3.18
4938 7268 6.430925 TGAGTGGTTGATTATTGGAACTGAAG 59.569 38.462 0.00 0.00 0.00 3.02
4943 7273 6.575162 AACTGAGTGGTTGATTATTGGAAC 57.425 37.500 0.00 0.00 0.00 3.62
4953 7283 1.490490 AGAGGCAAACTGAGTGGTTGA 59.510 47.619 1.41 0.00 45.82 3.18
4956 7286 1.477558 CCAAGAGGCAAACTGAGTGGT 60.478 52.381 0.00 0.00 0.00 4.16
4975 7305 6.037172 AGTCTTGTACATGAACGAATAATGCC 59.963 38.462 12.62 0.00 0.00 4.40
5011 7341 7.856145 ACATACTTTGCCAATTTGAAAACAA 57.144 28.000 0.00 0.00 0.00 2.83
5012 7342 7.856145 AACATACTTTGCCAATTTGAAAACA 57.144 28.000 0.00 0.00 0.00 2.83
5017 7347 9.941325 ATGAATAAACATACTTTGCCAATTTGA 57.059 25.926 0.00 0.00 0.00 2.69
5050 7380 4.183865 TGTCACAGCATCTAGTTGCATAC 58.816 43.478 24.07 16.38 45.23 2.39
5051 7381 4.470334 TGTCACAGCATCTAGTTGCATA 57.530 40.909 24.07 6.86 45.23 3.14
5053 7383 2.837532 TGTCACAGCATCTAGTTGCA 57.162 45.000 24.07 4.31 45.23 4.08
5054 7384 3.250762 TGTTTGTCACAGCATCTAGTTGC 59.749 43.478 16.51 16.51 43.09 4.17
5055 7385 5.207768 GTTGTTTGTCACAGCATCTAGTTG 58.792 41.667 0.00 0.00 36.63 3.16
5056 7386 4.881273 TGTTGTTTGTCACAGCATCTAGTT 59.119 37.500 0.00 0.00 41.36 2.24
5057 7387 4.450976 TGTTGTTTGTCACAGCATCTAGT 58.549 39.130 0.00 0.00 41.36 2.57
5064 7394 4.811555 TCTACATGTTGTTTGTCACAGC 57.188 40.909 2.30 0.00 36.48 4.40
5066 7396 6.763610 TGTGTATCTACATGTTGTTTGTCACA 59.236 34.615 2.30 11.68 38.63 3.58
5067 7397 7.184800 TGTGTATCTACATGTTGTTTGTCAC 57.815 36.000 2.30 9.53 38.63 3.67
5068 7398 7.877612 AGATGTGTATCTACATGTTGTTTGTCA 59.122 33.333 2.30 2.12 41.82 3.58
5069 7399 8.256611 AGATGTGTATCTACATGTTGTTTGTC 57.743 34.615 2.30 0.00 41.82 3.18
5070 7400 7.877612 TGAGATGTGTATCTACATGTTGTTTGT 59.122 33.333 2.30 0.00 43.63 2.83
5071 7401 8.255394 TGAGATGTGTATCTACATGTTGTTTG 57.745 34.615 2.30 0.00 43.63 2.93
5072 7402 8.846943 TTGAGATGTGTATCTACATGTTGTTT 57.153 30.769 2.30 0.00 43.63 2.83
5086 7416 4.346709 TGTGAAGAACCCTTGAGATGTGTA 59.653 41.667 0.00 0.00 31.62 2.90
5092 7422 2.036387 TCGTGTGAAGAACCCTTGAGA 58.964 47.619 0.00 0.00 31.62 3.27
5108 7438 5.831997 TCTACTGTATTCATGGACATCGTG 58.168 41.667 0.00 0.00 0.00 4.35
5111 7441 6.749578 CGCTATCTACTGTATTCATGGACATC 59.250 42.308 0.00 0.00 0.00 3.06
5116 7446 5.184096 ACTCCGCTATCTACTGTATTCATGG 59.816 44.000 0.00 0.00 0.00 3.66
5119 7449 6.320418 TGAAACTCCGCTATCTACTGTATTCA 59.680 38.462 0.00 0.00 0.00 2.57
5122 7452 6.902771 ATGAAACTCCGCTATCTACTGTAT 57.097 37.500 0.00 0.00 0.00 2.29
5128 7458 7.113658 AGAAAGAATGAAACTCCGCTATCTA 57.886 36.000 0.00 0.00 0.00 1.98
5132 7462 5.794894 AGAAGAAAGAATGAAACTCCGCTA 58.205 37.500 0.00 0.00 0.00 4.26
5134 7464 5.049405 TGAAGAAGAAAGAATGAAACTCCGC 60.049 40.000 0.00 0.00 0.00 5.54
5136 7466 7.264373 TGTGAAGAAGAAAGAATGAAACTCC 57.736 36.000 0.00 0.00 0.00 3.85
5137 7467 8.184192 TGTTGTGAAGAAGAAAGAATGAAACTC 58.816 33.333 0.00 0.00 0.00 3.01
5138 7468 8.055279 TGTTGTGAAGAAGAAAGAATGAAACT 57.945 30.769 0.00 0.00 0.00 2.66
5160 7490 1.164041 CGAAGTGCCCGGTTCTTGTT 61.164 55.000 0.00 0.00 0.00 2.83
5178 7508 1.516386 CTACTGTAGCCACCACGCG 60.516 63.158 3.53 3.53 0.00 6.01
5229 7559 6.639686 CCAACTAATGTGATTGCTGATATTGC 59.360 38.462 0.00 0.00 0.00 3.56
5235 7568 5.164620 TCTCCAACTAATGTGATTGCTGA 57.835 39.130 0.00 0.00 0.00 4.26
5248 7583 6.289064 GTCAAAGTTCCTTCTTCTCCAACTA 58.711 40.000 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.