Multiple sequence alignment - TraesCS2D01G500200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G500200 chr2D 100.000 3113 0 0 1 3113 594651237 594648125 0.000000e+00 5749.0
1 TraesCS2D01G500200 chr2D 89.866 1046 103 2 981 2023 586855401 586856446 0.000000e+00 1341.0
2 TraesCS2D01G500200 chr2D 96.250 240 7 2 571 809 591307410 591307172 2.910000e-105 392.0
3 TraesCS2D01G500200 chr2D 91.192 193 15 2 3 193 493617559 493617367 8.560000e-66 261.0
4 TraesCS2D01G500200 chr2D 93.023 43 0 1 2047 2086 586856494 586856536 3.350000e-05 60.2
5 TraesCS2D01G500200 chr2B 95.139 1831 63 12 804 2623 722347264 722345449 0.000000e+00 2865.0
6 TraesCS2D01G500200 chr2B 85.759 1271 113 28 981 2191 708354689 708355951 0.000000e+00 1282.0
7 TraesCS2D01G500200 chr2B 82.533 229 27 3 1004 1231 708324833 708325049 4.100000e-44 189.0
8 TraesCS2D01G500200 chr2A 95.528 1677 36 16 802 2456 729208292 729206633 0.000000e+00 2645.0
9 TraesCS2D01G500200 chr2A 85.714 763 65 20 1471 2191 721645157 721645917 0.000000e+00 765.0
10 TraesCS2D01G500200 chr2A 90.244 410 40 0 1033 1442 721644751 721645160 1.270000e-148 536.0
11 TraesCS2D01G500200 chr2A 89.976 409 29 5 2451 2857 729206082 729205684 4.600000e-143 518.0
12 TraesCS2D01G500200 chr2A 95.763 236 8 2 576 809 585704267 585704032 2.270000e-101 379.0
13 TraesCS2D01G500200 chr2A 88.258 264 21 6 2848 3111 729204613 729204360 1.080000e-79 307.0
14 TraesCS2D01G500200 chr2A 85.393 178 9 8 227 400 729208575 729208411 5.340000e-38 169.0
15 TraesCS2D01G500200 chr5D 97.403 231 5 1 580 809 118272900 118272670 2.910000e-105 392.0
16 TraesCS2D01G500200 chr5D 96.581 234 7 1 577 809 543670715 543670948 1.350000e-103 387.0
17 TraesCS2D01G500200 chr5D 95.378 238 10 1 573 809 360025715 360025952 8.150000e-101 377.0
18 TraesCS2D01G500200 chr5D 90.155 193 16 3 3 193 549652061 549651870 6.670000e-62 248.0
19 TraesCS2D01G500200 chr5D 89.637 193 18 2 3 193 513925527 513925719 8.620000e-61 244.0
20 TraesCS2D01G500200 chr6B 96.203 237 7 2 575 809 634640633 634640397 1.350000e-103 387.0
21 TraesCS2D01G500200 chr6B 96.552 232 7 1 579 809 697927457 697927688 1.750000e-102 383.0
22 TraesCS2D01G500200 chr3D 95.062 243 11 1 568 809 100400507 100400749 6.300000e-102 381.0
23 TraesCS2D01G500200 chr1B 94.048 252 9 5 564 809 12756827 12757078 8.150000e-101 377.0
24 TraesCS2D01G500200 chr5A 91.192 193 15 2 3 193 616921394 616921586 8.560000e-66 261.0
25 TraesCS2D01G500200 chr6A 90.674 193 16 2 3 193 591793630 591793822 3.980000e-64 255.0
26 TraesCS2D01G500200 chr3B 89.744 195 16 4 3 195 689696039 689696231 2.400000e-61 246.0
27 TraesCS2D01G500200 chr3B 100.000 32 0 0 1767 1798 239303681 239303712 3.350000e-05 60.2
28 TraesCS2D01G500200 chr4D 89.637 193 18 2 3 193 399536058 399536250 8.620000e-61 244.0
29 TraesCS2D01G500200 chr3A 89.583 192 17 3 3 191 9184284 9184093 1.120000e-59 241.0
30 TraesCS2D01G500200 chr3A 93.023 43 3 0 1756 1798 194701138 194701180 2.590000e-06 63.9
31 TraesCS2D01G500200 chrUn 89.175 194 17 4 3 193 52109752 52109560 4.010000e-59 239.0
32 TraesCS2D01G500200 chr7D 90.698 43 4 0 1755 1797 41440018 41439976 1.210000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G500200 chr2D 594648125 594651237 3112 True 5749.00 5749 100.00000 1 3113 1 chr2D.!!$R3 3112
1 TraesCS2D01G500200 chr2D 586855401 586856536 1135 False 700.60 1341 91.44450 981 2086 2 chr2D.!!$F1 1105
2 TraesCS2D01G500200 chr2B 722345449 722347264 1815 True 2865.00 2865 95.13900 804 2623 1 chr2B.!!$R1 1819
3 TraesCS2D01G500200 chr2B 708354689 708355951 1262 False 1282.00 1282 85.75900 981 2191 1 chr2B.!!$F2 1210
4 TraesCS2D01G500200 chr2A 729204360 729208575 4215 True 909.75 2645 89.78875 227 3111 4 chr2A.!!$R2 2884
5 TraesCS2D01G500200 chr2A 721644751 721645917 1166 False 650.50 765 87.97900 1033 2191 2 chr2A.!!$F1 1158

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
48 49 0.034863 TTGGCGGTAGGGATGTTTCC 60.035 55.0 0.00 0.0 41.77 3.13 F
782 788 0.035439 AACACATCGCCGGAAATCCT 60.035 50.0 5.05 0.0 0.00 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1341 1366 1.519455 GTACTTGCAGGCGCGATCT 60.519 57.895 12.1 2.76 42.97 2.75 R
2350 2451 0.165295 TCTCACGACGATGACACGAC 59.835 55.000 0.0 0.00 37.03 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.322322 TTGGGTTGTACAGGCTACCG 59.678 55.000 8.08 0.00 35.58 4.02
20 21 1.449070 GGGTTGTACAGGCTACCGC 60.449 63.158 8.08 0.00 35.58 5.68
30 31 4.695560 GCTACCGCCAGTCTGTTT 57.304 55.556 0.00 0.00 0.00 2.83
31 32 2.162716 GCTACCGCCAGTCTGTTTG 58.837 57.895 0.00 0.00 0.00 2.93
32 33 1.298859 GCTACCGCCAGTCTGTTTGG 61.299 60.000 0.00 0.12 38.78 3.28
38 39 2.840974 CCAGTCTGTTTGGCGGTAG 58.159 57.895 0.00 0.00 0.00 3.18
39 40 0.673644 CCAGTCTGTTTGGCGGTAGG 60.674 60.000 0.00 0.00 0.00 3.18
40 41 0.673644 CAGTCTGTTTGGCGGTAGGG 60.674 60.000 0.00 0.00 0.00 3.53
41 42 0.834687 AGTCTGTTTGGCGGTAGGGA 60.835 55.000 0.00 0.00 0.00 4.20
42 43 0.252197 GTCTGTTTGGCGGTAGGGAT 59.748 55.000 0.00 0.00 0.00 3.85
43 44 0.251916 TCTGTTTGGCGGTAGGGATG 59.748 55.000 0.00 0.00 0.00 3.51
44 45 0.035439 CTGTTTGGCGGTAGGGATGT 60.035 55.000 0.00 0.00 0.00 3.06
45 46 0.402504 TGTTTGGCGGTAGGGATGTT 59.597 50.000 0.00 0.00 0.00 2.71
46 47 1.202952 TGTTTGGCGGTAGGGATGTTT 60.203 47.619 0.00 0.00 0.00 2.83
47 48 1.471287 GTTTGGCGGTAGGGATGTTTC 59.529 52.381 0.00 0.00 0.00 2.78
48 49 0.034863 TTGGCGGTAGGGATGTTTCC 60.035 55.000 0.00 0.00 41.77 3.13
49 50 0.912487 TGGCGGTAGGGATGTTTCCT 60.912 55.000 0.00 0.00 42.20 3.36
50 51 1.125633 GGCGGTAGGGATGTTTCCTA 58.874 55.000 0.00 0.00 42.20 2.94
54 55 2.235845 GTAGGGATGTTTCCTACCGC 57.764 55.000 8.64 0.00 46.75 5.68
55 56 1.125633 TAGGGATGTTTCCTACCGCC 58.874 55.000 0.00 0.00 42.20 6.13
56 57 0.912487 AGGGATGTTTCCTACCGCCA 60.912 55.000 0.00 0.00 42.20 5.69
57 58 0.034863 GGGATGTTTCCTACCGCCAA 60.035 55.000 0.00 0.00 42.20 4.52
58 59 1.379527 GGATGTTTCCTACCGCCAAG 58.620 55.000 0.00 0.00 39.14 3.61
59 60 2.017113 GGATGTTTCCTACCGCCAAGG 61.017 57.143 0.00 0.00 41.81 3.61
60 61 4.590280 GGATGTTTCCTACCGCCAAGGT 62.590 54.545 0.00 0.00 44.03 3.50
71 72 2.126372 CCAAGGTCCCTGGGGGTA 59.874 66.667 14.00 0.00 44.74 3.69
72 73 2.001269 CCAAGGTCCCTGGGGGTAG 61.001 68.421 14.00 0.00 44.74 3.18
73 74 2.001269 CAAGGTCCCTGGGGGTAGG 61.001 68.421 14.00 0.00 44.74 3.18
74 75 3.964484 AAGGTCCCTGGGGGTAGGC 62.964 68.421 14.00 0.00 44.74 3.93
75 76 4.433194 GGTCCCTGGGGGTAGGCT 62.433 72.222 14.00 0.00 44.74 4.58
76 77 3.090532 GTCCCTGGGGGTAGGCTG 61.091 72.222 14.00 0.00 44.74 4.85
77 78 3.622263 TCCCTGGGGGTAGGCTGT 61.622 66.667 14.00 0.00 44.74 4.40
78 79 2.614013 CCCTGGGGGTAGGCTGTT 60.614 66.667 4.27 0.00 38.25 3.16
79 80 1.307517 CCCTGGGGGTAGGCTGTTA 60.308 63.158 4.27 0.00 38.25 2.41
80 81 1.632965 CCCTGGGGGTAGGCTGTTAC 61.633 65.000 4.27 0.00 38.25 2.50
81 82 0.912487 CCTGGGGGTAGGCTGTTACA 60.912 60.000 0.00 0.00 0.00 2.41
82 83 0.252197 CTGGGGGTAGGCTGTTACAC 59.748 60.000 0.00 0.00 0.00 2.90
83 84 1.202769 TGGGGGTAGGCTGTTACACC 61.203 60.000 0.00 0.00 44.79 4.16
85 86 2.692960 GGGTAGGCTGTTACACCCT 58.307 57.895 14.08 4.50 46.08 4.34
86 87 1.870064 GGGTAGGCTGTTACACCCTA 58.130 55.000 14.08 2.49 46.08 3.53
87 88 1.483827 GGGTAGGCTGTTACACCCTAC 59.516 57.143 22.28 22.28 46.08 3.18
88 89 2.975732 GTAGGCTGTTACACCCTACC 57.024 55.000 20.62 7.68 43.31 3.18
89 90 1.135721 GTAGGCTGTTACACCCTACCG 59.864 57.143 20.62 0.00 43.31 4.02
90 91 1.449070 GGCTGTTACACCCTACCGC 60.449 63.158 0.00 0.00 0.00 5.68
91 92 1.449070 GCTGTTACACCCTACCGCC 60.449 63.158 0.00 0.00 0.00 6.13
92 93 1.976898 CTGTTACACCCTACCGCCA 59.023 57.895 0.00 0.00 0.00 5.69
93 94 0.539986 CTGTTACACCCTACCGCCAT 59.460 55.000 0.00 0.00 0.00 4.40
94 95 0.250793 TGTTACACCCTACCGCCATG 59.749 55.000 0.00 0.00 0.00 3.66
95 96 0.538118 GTTACACCCTACCGCCATGA 59.462 55.000 0.00 0.00 0.00 3.07
96 97 1.065998 GTTACACCCTACCGCCATGAA 60.066 52.381 0.00 0.00 0.00 2.57
97 98 0.538118 TACACCCTACCGCCATGAAC 59.462 55.000 0.00 0.00 0.00 3.18
98 99 1.451387 CACCCTACCGCCATGAACC 60.451 63.158 0.00 0.00 0.00 3.62
99 100 1.615424 ACCCTACCGCCATGAACCT 60.615 57.895 0.00 0.00 0.00 3.50
100 101 1.205460 ACCCTACCGCCATGAACCTT 61.205 55.000 0.00 0.00 0.00 3.50
101 102 0.748005 CCCTACCGCCATGAACCTTG 60.748 60.000 0.00 0.00 0.00 3.61
102 103 0.748005 CCTACCGCCATGAACCTTGG 60.748 60.000 0.00 0.00 37.31 3.61
113 114 4.911901 ACCTTGGCGGTAGCAAAA 57.088 50.000 0.00 0.00 46.73 2.44
114 115 3.119225 ACCTTGGCGGTAGCAAAAA 57.881 47.368 0.00 0.00 46.73 1.94
115 116 0.958822 ACCTTGGCGGTAGCAAAAAG 59.041 50.000 0.00 0.00 46.73 2.27
116 117 2.428952 ACCTTGGCGGTAGCAAAAAGG 61.429 52.381 12.53 12.53 46.73 3.11
121 122 1.519408 GCGGTAGCAAAAAGGTCAGA 58.481 50.000 0.00 0.00 44.35 3.27
122 123 2.084546 GCGGTAGCAAAAAGGTCAGAT 58.915 47.619 0.00 0.00 44.35 2.90
123 124 2.096013 GCGGTAGCAAAAAGGTCAGATC 59.904 50.000 0.00 0.00 44.35 2.75
124 125 3.600388 CGGTAGCAAAAAGGTCAGATCT 58.400 45.455 0.00 0.00 0.00 2.75
125 126 4.003648 CGGTAGCAAAAAGGTCAGATCTT 58.996 43.478 0.00 0.00 0.00 2.40
126 127 4.142816 CGGTAGCAAAAAGGTCAGATCTTG 60.143 45.833 0.00 0.00 0.00 3.02
127 128 5.003804 GGTAGCAAAAAGGTCAGATCTTGA 58.996 41.667 0.00 0.00 0.00 3.02
128 129 5.473504 GGTAGCAAAAAGGTCAGATCTTGAA 59.526 40.000 0.00 0.00 37.61 2.69
129 130 6.151817 GGTAGCAAAAAGGTCAGATCTTGAAT 59.848 38.462 0.00 0.00 37.61 2.57
130 131 6.661304 AGCAAAAAGGTCAGATCTTGAATT 57.339 33.333 0.00 0.00 37.61 2.17
131 132 7.059202 AGCAAAAAGGTCAGATCTTGAATTT 57.941 32.000 0.00 0.00 37.61 1.82
132 133 7.503549 AGCAAAAAGGTCAGATCTTGAATTTT 58.496 30.769 0.00 3.68 38.02 1.82
133 134 7.989170 AGCAAAAAGGTCAGATCTTGAATTTTT 59.011 29.630 0.00 16.20 42.15 1.94
191 192 8.686397 AAAAGGATCAAAACACAAAAATTTGC 57.314 26.923 5.82 0.00 41.79 3.68
192 193 6.375945 AGGATCAAAACACAAAAATTTGCC 57.624 33.333 5.82 0.00 41.79 4.52
193 194 5.884792 AGGATCAAAACACAAAAATTTGCCA 59.115 32.000 5.82 0.00 41.79 4.92
194 195 5.970612 GGATCAAAACACAAAAATTTGCCAC 59.029 36.000 5.82 0.00 41.79 5.01
195 196 5.302357 TCAAAACACAAAAATTTGCCACC 57.698 34.783 5.82 0.00 41.79 4.61
196 197 4.094212 CAAAACACAAAAATTTGCCACCG 58.906 39.130 5.82 0.00 41.79 4.94
197 198 1.946745 ACACAAAAATTTGCCACCGG 58.053 45.000 0.00 0.00 41.79 5.28
198 199 1.224965 CACAAAAATTTGCCACCGGG 58.775 50.000 6.32 0.00 41.79 5.73
211 212 4.899239 CCGGGCGAGTGCAGGATC 62.899 72.222 0.00 0.00 45.35 3.36
213 214 4.899239 GGGCGAGTGCAGGATCGG 62.899 72.222 15.31 1.23 45.35 4.18
224 225 3.908081 GGATCGGCGGCGACCTTA 61.908 66.667 37.06 14.94 0.00 2.69
225 226 2.657620 GATCGGCGGCGACCTTAC 60.658 66.667 37.06 20.04 0.00 2.34
231 232 3.466879 CGGCGACCTTACCGTTTC 58.533 61.111 0.00 0.00 44.46 2.78
245 246 2.415168 ACCGTTTCGTACTTGCATGATG 59.585 45.455 6.60 0.00 0.00 3.07
246 247 2.430956 CGTTTCGTACTTGCATGATGC 58.569 47.619 11.12 11.12 45.29 3.91
289 290 4.501714 GCCGTGCCCGTGATCGTA 62.502 66.667 0.00 0.00 35.01 3.43
290 291 2.278596 CCGTGCCCGTGATCGTAG 60.279 66.667 0.00 0.00 35.01 3.51
291 292 2.767445 CCGTGCCCGTGATCGTAGA 61.767 63.158 0.00 0.00 45.75 2.59
292 293 1.298413 CGTGCCCGTGATCGTAGAG 60.298 63.158 0.00 0.00 43.63 2.43
293 294 1.065928 GTGCCCGTGATCGTAGAGG 59.934 63.158 0.00 0.00 43.63 3.69
294 295 2.125326 TGCCCGTGATCGTAGAGGG 61.125 63.158 6.45 6.45 43.63 4.30
313 314 3.323979 AGGGATCAGTCACGTAAACACTT 59.676 43.478 0.00 0.00 31.21 3.16
339 340 8.857694 TTTTTAGGGAGATTCACGTAAAGAAT 57.142 30.769 0.00 0.00 38.35 2.40
340 341 8.857694 TTTTAGGGAGATTCACGTAAAGAATT 57.142 30.769 1.62 0.00 35.93 2.17
341 342 8.857694 TTTAGGGAGATTCACGTAAAGAATTT 57.142 30.769 1.62 0.00 43.42 1.82
342 343 9.947433 TTTAGGGAGATTCACGTAAAGAATTTA 57.053 29.630 1.62 0.00 40.09 1.40
385 388 4.260579 CGTAAAGACTTGATGCACACACAA 60.261 41.667 0.00 0.00 0.00 3.33
386 389 4.717233 AAAGACTTGATGCACACACAAA 57.283 36.364 0.00 0.00 0.00 2.83
387 390 4.717233 AAGACTTGATGCACACACAAAA 57.283 36.364 0.00 0.00 0.00 2.44
388 391 4.717233 AGACTTGATGCACACACAAAAA 57.283 36.364 0.00 0.00 0.00 1.94
445 451 9.836864 AAAGACTTGATGCATGTGATATACTAA 57.163 29.630 2.46 0.00 0.00 2.24
517 523 0.459585 AACAGCTACATACACGGCGG 60.460 55.000 13.24 2.35 0.00 6.13
519 525 0.459585 CAGCTACATACACGGCGGTT 60.460 55.000 13.24 0.00 0.00 4.44
524 530 1.062365 CATACACGGCGGTTGCATG 59.938 57.895 13.24 3.97 45.35 4.06
539 545 1.089920 GCATGCACGACTCCTGATTT 58.910 50.000 14.21 0.00 0.00 2.17
540 546 2.279741 GCATGCACGACTCCTGATTTA 58.720 47.619 14.21 0.00 0.00 1.40
564 570 2.546373 CGTAGGAAACCAACCGAACTCA 60.546 50.000 0.00 0.00 0.00 3.41
566 572 2.504367 AGGAAACCAACCGAACTCATG 58.496 47.619 0.00 0.00 0.00 3.07
567 573 1.068541 GGAAACCAACCGAACTCATGC 60.069 52.381 0.00 0.00 0.00 4.06
568 574 1.606668 GAAACCAACCGAACTCATGCA 59.393 47.619 0.00 0.00 0.00 3.96
569 575 1.686355 AACCAACCGAACTCATGCAA 58.314 45.000 0.00 0.00 0.00 4.08
570 576 1.238439 ACCAACCGAACTCATGCAAG 58.762 50.000 0.00 0.00 0.00 4.01
571 577 0.109597 CCAACCGAACTCATGCAAGC 60.110 55.000 0.00 0.00 0.00 4.01
572 578 0.453282 CAACCGAACTCATGCAAGCG 60.453 55.000 0.00 0.00 0.00 4.68
573 579 0.602638 AACCGAACTCATGCAAGCGA 60.603 50.000 0.00 0.00 0.00 4.93
574 580 0.602638 ACCGAACTCATGCAAGCGAA 60.603 50.000 0.00 0.00 0.00 4.70
575 581 0.095935 CCGAACTCATGCAAGCGAAG 59.904 55.000 0.00 0.00 0.00 3.79
576 582 0.792640 CGAACTCATGCAAGCGAAGT 59.207 50.000 0.00 0.00 0.00 3.01
577 583 1.195448 CGAACTCATGCAAGCGAAGTT 59.805 47.619 0.00 6.32 0.00 2.66
578 584 2.349817 CGAACTCATGCAAGCGAAGTTT 60.350 45.455 0.00 0.00 0.00 2.66
579 585 3.632189 GAACTCATGCAAGCGAAGTTTT 58.368 40.909 0.00 0.00 0.00 2.43
580 586 3.715628 ACTCATGCAAGCGAAGTTTTT 57.284 38.095 0.00 0.00 0.00 1.94
603 609 3.945981 TTTAGCATCGGTACAGACACA 57.054 42.857 0.00 0.00 0.00 3.72
604 610 3.945981 TTAGCATCGGTACAGACACAA 57.054 42.857 0.00 0.00 0.00 3.33
605 611 2.370281 AGCATCGGTACAGACACAAG 57.630 50.000 0.00 0.00 0.00 3.16
606 612 0.721718 GCATCGGTACAGACACAAGC 59.278 55.000 0.00 0.00 0.00 4.01
607 613 0.992072 CATCGGTACAGACACAAGCG 59.008 55.000 0.00 0.00 35.57 4.68
608 614 0.736325 ATCGGTACAGACACAAGCGC 60.736 55.000 0.00 0.00 34.35 5.92
609 615 1.372997 CGGTACAGACACAAGCGCT 60.373 57.895 2.64 2.64 0.00 5.92
610 616 1.344942 CGGTACAGACACAAGCGCTC 61.345 60.000 12.06 0.00 0.00 5.03
611 617 0.319555 GGTACAGACACAAGCGCTCA 60.320 55.000 12.06 0.00 0.00 4.26
612 618 1.673033 GGTACAGACACAAGCGCTCAT 60.673 52.381 12.06 0.00 0.00 2.90
613 619 2.416836 GGTACAGACACAAGCGCTCATA 60.417 50.000 12.06 0.00 0.00 2.15
614 620 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
615 621 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
616 622 4.327982 ACAGACACAAGCGCTCATATAT 57.672 40.909 12.06 0.00 0.00 0.86
617 623 5.453567 ACAGACACAAGCGCTCATATATA 57.546 39.130 12.06 0.00 0.00 0.86
618 624 5.223382 ACAGACACAAGCGCTCATATATAC 58.777 41.667 12.06 0.00 0.00 1.47
619 625 4.322009 CAGACACAAGCGCTCATATATACG 59.678 45.833 12.06 0.00 0.00 3.06
627 633 3.359654 CGCTCATATATACGCGCATACA 58.640 45.455 5.73 0.00 39.11 2.29
628 634 3.177838 CGCTCATATATACGCGCATACAC 59.822 47.826 5.73 0.00 39.11 2.90
629 635 4.352039 GCTCATATATACGCGCATACACT 58.648 43.478 5.73 0.00 0.00 3.55
630 636 4.438145 GCTCATATATACGCGCATACACTC 59.562 45.833 5.73 0.00 0.00 3.51
631 637 5.554822 TCATATATACGCGCATACACTCA 57.445 39.130 5.73 0.00 0.00 3.41
632 638 5.329493 TCATATATACGCGCATACACTCAC 58.671 41.667 5.73 0.00 0.00 3.51
633 639 2.410785 TATACGCGCATACACTCACC 57.589 50.000 5.73 0.00 0.00 4.02
634 640 0.249322 ATACGCGCATACACTCACCC 60.249 55.000 5.73 0.00 0.00 4.61
635 641 2.287457 TACGCGCATACACTCACCCC 62.287 60.000 5.73 0.00 0.00 4.95
636 642 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
637 643 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
638 644 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
639 645 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
640 646 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
641 647 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
642 648 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
643 649 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
644 650 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
645 651 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
646 652 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
647 653 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
648 654 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
649 655 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
650 656 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
651 657 1.358725 CCCCTATGAACGCACACACG 61.359 60.000 0.00 0.00 39.50 4.49
658 664 2.279650 ACGCACACACGTACACCC 60.280 61.111 0.00 0.00 46.19 4.61
659 665 2.028484 CGCACACACGTACACCCT 59.972 61.111 0.00 0.00 0.00 4.34
660 666 1.286570 CGCACACACGTACACCCTA 59.713 57.895 0.00 0.00 0.00 3.53
661 667 1.005294 CGCACACACGTACACCCTAC 61.005 60.000 0.00 0.00 0.00 3.18
662 668 0.668401 GCACACACGTACACCCTACC 60.668 60.000 0.00 0.00 0.00 3.18
663 669 0.037975 CACACACGTACACCCTACCC 60.038 60.000 0.00 0.00 0.00 3.69
664 670 1.187567 ACACACGTACACCCTACCCC 61.188 60.000 0.00 0.00 0.00 4.95
665 671 0.901580 CACACGTACACCCTACCCCT 60.902 60.000 0.00 0.00 0.00 4.79
666 672 0.704076 ACACGTACACCCTACCCCTA 59.296 55.000 0.00 0.00 0.00 3.53
667 673 1.288932 ACACGTACACCCTACCCCTAT 59.711 52.381 0.00 0.00 0.00 2.57
668 674 1.684983 CACGTACACCCTACCCCTATG 59.315 57.143 0.00 0.00 0.00 2.23
669 675 1.570501 ACGTACACCCTACCCCTATGA 59.429 52.381 0.00 0.00 0.00 2.15
670 676 2.236766 CGTACACCCTACCCCTATGAG 58.763 57.143 0.00 0.00 0.00 2.90
671 677 1.969208 GTACACCCTACCCCTATGAGC 59.031 57.143 0.00 0.00 0.00 4.26
672 678 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
673 679 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
674 680 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
675 681 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
676 682 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
677 683 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
678 684 0.639943 TACCCCTATGAGCACCTCCA 59.360 55.000 0.00 0.00 0.00 3.86
679 685 0.692419 ACCCCTATGAGCACCTCCAG 60.692 60.000 0.00 0.00 0.00 3.86
680 686 0.399091 CCCCTATGAGCACCTCCAGA 60.399 60.000 0.00 0.00 0.00 3.86
681 687 1.047002 CCCTATGAGCACCTCCAGAG 58.953 60.000 0.00 0.00 0.00 3.35
682 688 1.412217 CCCTATGAGCACCTCCAGAGA 60.412 57.143 0.00 0.00 0.00 3.10
683 689 1.686052 CCTATGAGCACCTCCAGAGAC 59.314 57.143 0.00 0.00 0.00 3.36
684 690 2.665165 CTATGAGCACCTCCAGAGACT 58.335 52.381 0.00 0.00 0.00 3.24
685 691 1.193323 ATGAGCACCTCCAGAGACTG 58.807 55.000 0.00 0.00 0.00 3.51
686 692 0.113190 TGAGCACCTCCAGAGACTGA 59.887 55.000 0.00 0.00 32.44 3.41
687 693 0.817013 GAGCACCTCCAGAGACTGAG 59.183 60.000 0.00 0.00 32.44 3.35
688 694 1.217779 GCACCTCCAGAGACTGAGC 59.782 63.158 0.00 0.00 32.44 4.26
689 695 1.896694 CACCTCCAGAGACTGAGCC 59.103 63.158 0.00 0.00 32.44 4.70
690 696 1.680651 ACCTCCAGAGACTGAGCCG 60.681 63.158 0.00 0.00 32.44 5.52
691 697 2.422231 CCTCCAGAGACTGAGCCGG 61.422 68.421 0.00 0.00 32.44 6.13
692 698 3.071206 TCCAGAGACTGAGCCGGC 61.071 66.667 21.89 21.89 32.44 6.13
693 699 3.385384 CCAGAGACTGAGCCGGCA 61.385 66.667 31.54 7.98 32.44 5.69
694 700 2.729479 CCAGAGACTGAGCCGGCAT 61.729 63.158 31.54 14.28 32.44 4.40
695 701 1.395045 CCAGAGACTGAGCCGGCATA 61.395 60.000 31.54 16.21 32.44 3.14
696 702 0.678395 CAGAGACTGAGCCGGCATAT 59.322 55.000 31.54 8.11 32.44 1.78
697 703 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
698 704 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
699 705 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
700 706 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
701 707 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
702 708 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
703 709 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
704 710 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
705 711 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
706 712 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
707 713 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
708 714 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
709 715 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
710 716 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
711 717 5.587844 GCCGGCATATCATCTTGAGATTTAT 59.412 40.000 24.80 0.00 31.21 1.40
712 718 6.457934 GCCGGCATATCATCTTGAGATTTATG 60.458 42.308 24.80 12.28 34.43 1.90
713 719 6.820152 CCGGCATATCATCTTGAGATTTATGA 59.180 38.462 17.06 5.24 33.82 2.15
714 720 7.335171 CCGGCATATCATCTTGAGATTTATGAA 59.665 37.037 17.06 0.00 33.82 2.57
715 721 8.388853 CGGCATATCATCTTGAGATTTATGAAG 58.611 37.037 17.06 10.18 33.82 3.02
716 722 9.228949 GGCATATCATCTTGAGATTTATGAAGT 57.771 33.333 17.06 0.00 33.82 3.01
720 726 8.674263 ATCATCTTGAGATTTATGAAGTCACC 57.326 34.615 0.00 0.00 32.47 4.02
721 727 7.623630 TCATCTTGAGATTTATGAAGTCACCA 58.376 34.615 0.00 0.00 31.21 4.17
722 728 8.270030 TCATCTTGAGATTTATGAAGTCACCAT 58.730 33.333 0.00 0.00 31.21 3.55
723 729 9.551734 CATCTTGAGATTTATGAAGTCACCATA 57.448 33.333 0.00 0.00 31.21 2.74
724 730 9.775854 ATCTTGAGATTTATGAAGTCACCATAG 57.224 33.333 0.00 0.00 0.00 2.23
725 731 8.206867 TCTTGAGATTTATGAAGTCACCATAGG 58.793 37.037 0.00 0.00 0.00 2.57
726 732 6.291377 TGAGATTTATGAAGTCACCATAGGC 58.709 40.000 0.00 0.00 0.00 3.93
727 733 5.300752 AGATTTATGAAGTCACCATAGGCG 58.699 41.667 0.00 0.00 0.00 5.52
728 734 2.526304 TATGAAGTCACCATAGGCGC 57.474 50.000 0.00 0.00 0.00 6.53
729 735 0.179045 ATGAAGTCACCATAGGCGCC 60.179 55.000 21.89 21.89 0.00 6.53
730 736 1.264749 TGAAGTCACCATAGGCGCCT 61.265 55.000 34.85 34.85 0.00 5.52
731 737 0.530870 GAAGTCACCATAGGCGCCTC 60.531 60.000 36.73 17.40 0.00 4.70
732 738 2.279517 GTCACCATAGGCGCCTCG 60.280 66.667 36.73 25.26 0.00 4.63
733 739 2.758327 TCACCATAGGCGCCTCGT 60.758 61.111 36.73 24.45 0.00 4.18
734 740 2.279517 CACCATAGGCGCCTCGTC 60.280 66.667 36.73 1.08 0.00 4.20
735 741 3.900892 ACCATAGGCGCCTCGTCG 61.901 66.667 36.73 21.01 36.23 5.12
736 742 3.900892 CCATAGGCGCCTCGTCGT 61.901 66.667 36.73 11.27 36.23 4.34
737 743 2.353607 CATAGGCGCCTCGTCGTC 60.354 66.667 36.73 0.00 36.23 4.20
738 744 3.950254 ATAGGCGCCTCGTCGTCG 61.950 66.667 36.73 0.00 39.34 5.12
759 765 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
760 766 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
761 767 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
762 768 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
763 769 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
764 770 1.420430 ACGTCTCCTCCCACTGAAAA 58.580 50.000 0.00 0.00 0.00 2.29
765 771 1.070289 ACGTCTCCTCCCACTGAAAAC 59.930 52.381 0.00 0.00 0.00 2.43
766 772 1.070134 CGTCTCCTCCCACTGAAAACA 59.930 52.381 0.00 0.00 0.00 2.83
767 773 2.495084 GTCTCCTCCCACTGAAAACAC 58.505 52.381 0.00 0.00 0.00 3.32
768 774 2.123589 TCTCCTCCCACTGAAAACACA 58.876 47.619 0.00 0.00 0.00 3.72
769 775 2.711009 TCTCCTCCCACTGAAAACACAT 59.289 45.455 0.00 0.00 0.00 3.21
770 776 3.077359 CTCCTCCCACTGAAAACACATC 58.923 50.000 0.00 0.00 0.00 3.06
771 777 1.806542 CCTCCCACTGAAAACACATCG 59.193 52.381 0.00 0.00 0.00 3.84
772 778 1.197721 CTCCCACTGAAAACACATCGC 59.802 52.381 0.00 0.00 0.00 4.58
773 779 0.240945 CCCACTGAAAACACATCGCC 59.759 55.000 0.00 0.00 0.00 5.54
774 780 0.110238 CCACTGAAAACACATCGCCG 60.110 55.000 0.00 0.00 0.00 6.46
775 781 0.110238 CACTGAAAACACATCGCCGG 60.110 55.000 0.00 0.00 0.00 6.13
776 782 0.250124 ACTGAAAACACATCGCCGGA 60.250 50.000 5.05 0.00 0.00 5.14
777 783 0.871722 CTGAAAACACATCGCCGGAA 59.128 50.000 5.05 0.00 0.00 4.30
778 784 1.265635 CTGAAAACACATCGCCGGAAA 59.734 47.619 5.05 0.00 0.00 3.13
779 785 1.883275 TGAAAACACATCGCCGGAAAT 59.117 42.857 5.05 0.00 0.00 2.17
780 786 2.095466 TGAAAACACATCGCCGGAAATC 60.095 45.455 5.05 0.00 0.00 2.17
781 787 0.808755 AAACACATCGCCGGAAATCC 59.191 50.000 5.05 0.00 0.00 3.01
782 788 0.035439 AACACATCGCCGGAAATCCT 60.035 50.000 5.05 0.00 0.00 3.24
783 789 0.744414 ACACATCGCCGGAAATCCTG 60.744 55.000 5.05 0.00 0.00 3.86
784 790 0.461870 CACATCGCCGGAAATCCTGA 60.462 55.000 5.05 0.00 0.00 3.86
785 791 0.251916 ACATCGCCGGAAATCCTGAA 59.748 50.000 5.05 0.00 0.00 3.02
786 792 1.339631 ACATCGCCGGAAATCCTGAAA 60.340 47.619 5.05 0.00 0.00 2.69
787 793 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
788 794 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
789 795 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
790 796 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
791 797 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
792 798 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
793 799 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
794 800 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
795 801 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
796 802 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
831 838 5.107133 CGAAGTTGTAACGTGATTATCCCT 58.893 41.667 0.00 0.00 0.00 4.20
832 839 6.267817 CGAAGTTGTAACGTGATTATCCCTA 58.732 40.000 0.00 0.00 0.00 3.53
1937 1983 2.987547 GGACTCCACCGTGGACGA 60.988 66.667 16.73 0.00 42.67 4.20
1979 2025 1.592400 TACTCGTGCAAGGACCTCGG 61.592 60.000 0.00 0.00 0.00 4.63
2216 2311 3.058914 GTGGGTTGTATAATGCTGATCGC 60.059 47.826 3.07 3.07 39.77 4.58
2217 2312 2.157668 GGGTTGTATAATGCTGATCGCG 59.842 50.000 0.00 0.00 43.27 5.87
2238 2337 5.672856 CGCGATATAGCTTTGTTTTCTGTTC 59.327 40.000 0.00 0.00 34.40 3.18
2282 2381 8.466798 GTTAATTAGGTTATTGGTGTGCTGAAT 58.533 33.333 0.00 0.00 0.00 2.57
2284 2383 6.909550 TTAGGTTATTGGTGTGCTGAATTT 57.090 33.333 0.00 0.00 0.00 1.82
2322 2423 9.823647 CCATACTCCATAGTATATTAAGCAAGG 57.176 37.037 0.00 0.00 45.32 3.61
2346 2447 4.508124 GTCCAGTTTATGATAGTTGCCTCG 59.492 45.833 0.00 0.00 0.00 4.63
2349 2450 4.508124 CAGTTTATGATAGTTGCCTCGGTC 59.492 45.833 0.00 0.00 0.00 4.79
2350 2451 3.364889 TTATGATAGTTGCCTCGGTCG 57.635 47.619 0.00 0.00 0.00 4.79
2385 2489 6.454318 CGTCGTGAGAAAGAATTTGATACCTG 60.454 42.308 0.00 0.00 45.01 4.00
2407 2511 5.670485 TGTGTAGTTAGGCTATTGGTCATG 58.330 41.667 0.00 0.00 31.50 3.07
2410 2514 5.661312 TGTAGTTAGGCTATTGGTCATGTCT 59.339 40.000 0.00 0.00 31.50 3.41
2447 2553 5.398176 TTGAGTTTGCACTTTACACTACG 57.602 39.130 0.00 0.00 31.22 3.51
2449 2555 2.220133 AGTTTGCACTTTACACTACGCG 59.780 45.455 3.53 3.53 0.00 6.01
2471 3133 6.139169 CGCGTGATATGTAAGAATTTGCTTTC 59.861 38.462 0.00 0.00 0.00 2.62
2472 3134 6.966632 GCGTGATATGTAAGAATTTGCTTTCA 59.033 34.615 0.00 0.00 31.28 2.69
2473 3135 7.044706 GCGTGATATGTAAGAATTTGCTTTCAC 60.045 37.037 0.00 0.00 29.81 3.18
2475 3137 7.962918 GTGATATGTAAGAATTTGCTTTCACGT 59.037 33.333 0.00 0.00 29.81 4.49
2492 3154 3.188873 TCACGTTGTTCTTGGTTTTCGTT 59.811 39.130 0.00 0.00 0.00 3.85
2494 3156 3.058085 ACGTTGTTCTTGGTTTTCGTTGT 60.058 39.130 0.00 0.00 0.00 3.32
2496 3158 4.029750 CGTTGTTCTTGGTTTTCGTTGTTC 59.970 41.667 0.00 0.00 0.00 3.18
2545 3208 7.712797 TCTATTGTTCTTTTCAAAACCTGTCC 58.287 34.615 0.00 0.00 0.00 4.02
2546 3209 5.993748 TTGTTCTTTTCAAAACCTGTCCT 57.006 34.783 0.00 0.00 0.00 3.85
2561 3224 5.497474 ACCTGTCCTTATTTGTCGCTTAAT 58.503 37.500 0.00 0.00 0.00 1.40
2563 3226 5.817816 CCTGTCCTTATTTGTCGCTTAATCT 59.182 40.000 0.00 0.00 0.00 2.40
2616 3279 6.206634 TGGAAAAAGCGACAGAGATTACAAAT 59.793 34.615 0.00 0.00 0.00 2.32
2624 3288 6.307155 CGACAGAGATTACAAATCAAACACC 58.693 40.000 2.74 0.00 0.00 4.16
2640 3304 5.355630 TCAAACACCGAGAAGAAAAACATGA 59.644 36.000 0.00 0.00 0.00 3.07
2656 3320 4.675063 ACATGACCAAGAAATTAGGGGT 57.325 40.909 0.00 0.00 33.78 4.95
2668 3332 1.411741 TTAGGGGTCTAAGGGAGGGT 58.588 55.000 0.00 0.00 32.23 4.34
2672 3336 0.034380 GGGTCTAAGGGAGGGTTTGC 60.034 60.000 0.00 0.00 0.00 3.68
2692 3356 6.730960 TTGCGTCAGTTTTAAGTTATAGGG 57.269 37.500 0.00 0.00 0.00 3.53
2715 3379 3.026707 TCTGAGGTTGATCATCGGGTA 57.973 47.619 0.00 0.00 34.42 3.69
2717 3381 3.967326 TCTGAGGTTGATCATCGGGTATT 59.033 43.478 0.00 0.00 34.42 1.89
2720 3384 4.202253 TGAGGTTGATCATCGGGTATTGAG 60.202 45.833 0.00 0.00 0.00 3.02
2731 3395 2.291465 CGGGTATTGAGACAATGCATGG 59.709 50.000 0.00 0.00 0.00 3.66
2764 3428 7.009174 GCCCAATTGTTGTGAAATAACTAATCG 59.991 37.037 4.43 0.00 38.88 3.34
2799 3463 1.108776 GACCTCTGGGCATACGTGTA 58.891 55.000 0.00 0.00 35.63 2.90
2821 3485 1.875262 GCATTGGCGTCACACATCA 59.125 52.632 0.00 0.00 0.00 3.07
2831 3495 4.495472 GGCGTCACACATCAAATTAAATCG 59.505 41.667 0.00 0.00 0.00 3.34
2838 3502 8.611757 TCACACATCAAATTAAATCGTATCCTG 58.388 33.333 0.00 0.00 0.00 3.86
2913 4657 8.044908 AGAAAATAATGAAGAAGGCATGCAATT 58.955 29.630 21.36 13.67 0.00 2.32
2925 4669 5.979993 AGGCATGCAATTCAAACATGATAA 58.020 33.333 21.36 0.00 43.04 1.75
2926 4670 6.588204 AGGCATGCAATTCAAACATGATAAT 58.412 32.000 21.36 0.00 43.04 1.28
2927 4671 6.481976 AGGCATGCAATTCAAACATGATAATG 59.518 34.615 21.36 0.00 43.04 1.90
2969 4713 1.098712 AGCAAAAACAGGGCGTTCGA 61.099 50.000 0.00 0.00 36.59 3.71
2988 4732 2.411031 CGACAGCAATTTGTACACCGTC 60.411 50.000 0.00 0.00 0.00 4.79
2993 4737 2.031157 GCAATTTGTACACCGTCAAGCT 60.031 45.455 0.00 0.00 0.00 3.74
2996 4740 1.860676 TTGTACACCGTCAAGCTGAC 58.139 50.000 0.00 0.00 43.65 3.51
3016 4760 3.406764 ACCATTCAGTCAGAGCTTGTTC 58.593 45.455 0.00 0.00 0.00 3.18
3022 4766 2.922387 CAGTCAGAGCTTGTTCAGATCG 59.078 50.000 0.00 0.00 43.32 3.69
3027 4771 2.037772 AGAGCTTGTTCAGATCGGTGTT 59.962 45.455 0.00 0.00 43.32 3.32
3028 4772 2.808543 GAGCTTGTTCAGATCGGTGTTT 59.191 45.455 0.00 0.00 0.00 2.83
3029 4773 3.214328 AGCTTGTTCAGATCGGTGTTTT 58.786 40.909 0.00 0.00 0.00 2.43
3033 4777 2.032377 TGTTCAGATCGGTGTTTTTCGC 60.032 45.455 0.00 0.00 0.00 4.70
3034 4778 0.787787 TCAGATCGGTGTTTTTCGCG 59.212 50.000 0.00 0.00 0.00 5.87
3035 4779 0.789383 CAGATCGGTGTTTTTCGCGC 60.789 55.000 0.00 0.00 0.00 6.86
3036 4780 1.511254 GATCGGTGTTTTTCGCGCC 60.511 57.895 0.00 0.00 0.00 6.53
3037 4781 1.908066 GATCGGTGTTTTTCGCGCCT 61.908 55.000 0.00 0.00 34.56 5.52
3038 4782 1.908066 ATCGGTGTTTTTCGCGCCTC 61.908 55.000 0.00 0.00 34.56 4.70
3039 4783 2.604174 CGGTGTTTTTCGCGCCTCT 61.604 57.895 0.00 0.00 34.56 3.69
3040 4784 1.082104 GGTGTTTTTCGCGCCTCTG 60.082 57.895 0.00 0.00 33.96 3.35
3041 4785 1.082104 GTGTTTTTCGCGCCTCTGG 60.082 57.895 0.00 0.00 0.00 3.86
3042 4786 2.126850 GTTTTTCGCGCCTCTGGC 60.127 61.111 0.00 0.00 46.75 4.85
3094 4838 1.507562 TCGTGCCATGTACTTGTGTG 58.492 50.000 7.86 0.00 0.00 3.82
3100 4844 1.167851 CATGTACTTGTGTGCTGGGG 58.832 55.000 0.62 0.00 0.00 4.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.322322 CGGTAGCCTGTACAACCCAA 59.678 55.000 8.54 0.00 0.00 4.12
1 2 1.976898 CGGTAGCCTGTACAACCCA 59.023 57.895 8.54 0.00 0.00 4.51
2 3 1.449070 GCGGTAGCCTGTACAACCC 60.449 63.158 8.54 0.00 37.42 4.11
3 4 4.196965 GCGGTAGCCTGTACAACC 57.803 61.111 4.60 4.60 37.42 3.77
13 14 1.298859 CCAAACAGACTGGCGGTAGC 61.299 60.000 7.51 0.00 44.18 3.58
14 15 2.840974 CCAAACAGACTGGCGGTAG 58.159 57.895 7.51 0.00 0.00 3.18
20 21 0.673644 CCTACCGCCAAACAGACTGG 60.674 60.000 7.51 0.00 36.99 4.00
21 22 0.673644 CCCTACCGCCAAACAGACTG 60.674 60.000 0.00 0.00 0.00 3.51
22 23 0.834687 TCCCTACCGCCAAACAGACT 60.835 55.000 0.00 0.00 0.00 3.24
23 24 0.252197 ATCCCTACCGCCAAACAGAC 59.748 55.000 0.00 0.00 0.00 3.51
24 25 0.251916 CATCCCTACCGCCAAACAGA 59.748 55.000 0.00 0.00 0.00 3.41
25 26 0.035439 ACATCCCTACCGCCAAACAG 60.035 55.000 0.00 0.00 0.00 3.16
26 27 0.402504 AACATCCCTACCGCCAAACA 59.597 50.000 0.00 0.00 0.00 2.83
27 28 1.471287 GAAACATCCCTACCGCCAAAC 59.529 52.381 0.00 0.00 0.00 2.93
28 29 1.614850 GGAAACATCCCTACCGCCAAA 60.615 52.381 0.00 0.00 0.00 3.28
29 30 0.034863 GGAAACATCCCTACCGCCAA 60.035 55.000 0.00 0.00 0.00 4.52
30 31 0.912487 AGGAAACATCCCTACCGCCA 60.912 55.000 0.00 0.00 30.92 5.69
31 32 1.125633 TAGGAAACATCCCTACCGCC 58.874 55.000 0.00 0.00 35.30 6.13
32 33 2.235845 GTAGGAAACATCCCTACCGC 57.764 55.000 7.86 0.00 46.52 5.68
36 37 1.125633 GGCGGTAGGAAACATCCCTA 58.874 55.000 0.00 0.00 35.30 3.53
37 38 0.912487 TGGCGGTAGGAAACATCCCT 60.912 55.000 0.00 0.00 37.80 4.20
38 39 0.034863 TTGGCGGTAGGAAACATCCC 60.035 55.000 0.00 0.00 0.00 3.85
39 40 1.379527 CTTGGCGGTAGGAAACATCC 58.620 55.000 0.00 0.00 0.00 3.51
40 41 1.339727 ACCTTGGCGGTAGGAAACATC 60.340 52.381 7.07 0.00 46.73 3.06
41 42 0.696501 ACCTTGGCGGTAGGAAACAT 59.303 50.000 7.07 0.00 46.73 2.71
42 43 2.147695 ACCTTGGCGGTAGGAAACA 58.852 52.632 7.07 0.00 46.73 2.83
62 63 0.912487 TGTAACAGCCTACCCCCAGG 60.912 60.000 0.00 0.00 38.86 4.45
63 64 0.252197 GTGTAACAGCCTACCCCCAG 59.748 60.000 0.00 0.00 36.32 4.45
64 65 1.202769 GGTGTAACAGCCTACCCCCA 61.203 60.000 0.00 0.00 39.98 4.96
65 66 1.605992 GGTGTAACAGCCTACCCCC 59.394 63.158 0.00 0.00 39.98 5.40
73 74 1.449070 GGCGGTAGGGTGTAACAGC 60.449 63.158 0.00 0.00 39.98 4.40
74 75 0.539986 ATGGCGGTAGGGTGTAACAG 59.460 55.000 0.00 0.00 39.98 3.16
75 76 0.250793 CATGGCGGTAGGGTGTAACA 59.749 55.000 0.00 0.00 39.98 2.41
76 77 0.538118 TCATGGCGGTAGGGTGTAAC 59.462 55.000 0.00 0.00 0.00 2.50
77 78 1.065998 GTTCATGGCGGTAGGGTGTAA 60.066 52.381 0.00 0.00 0.00 2.41
78 79 0.538118 GTTCATGGCGGTAGGGTGTA 59.462 55.000 0.00 0.00 0.00 2.90
79 80 1.298667 GTTCATGGCGGTAGGGTGT 59.701 57.895 0.00 0.00 0.00 4.16
80 81 1.451387 GGTTCATGGCGGTAGGGTG 60.451 63.158 0.00 0.00 0.00 4.61
81 82 1.205460 AAGGTTCATGGCGGTAGGGT 61.205 55.000 0.00 0.00 0.00 4.34
82 83 0.748005 CAAGGTTCATGGCGGTAGGG 60.748 60.000 0.00 0.00 0.00 3.53
83 84 0.748005 CCAAGGTTCATGGCGGTAGG 60.748 60.000 0.00 0.00 0.00 3.18
84 85 2.780595 CCAAGGTTCATGGCGGTAG 58.219 57.895 0.00 0.00 0.00 3.18
98 99 0.958822 ACCTTTTTGCTACCGCCAAG 59.041 50.000 0.00 0.00 34.43 3.61
99 100 0.955905 GACCTTTTTGCTACCGCCAA 59.044 50.000 0.00 0.00 34.43 4.52
100 101 0.179015 TGACCTTTTTGCTACCGCCA 60.179 50.000 0.00 0.00 34.43 5.69
101 102 0.521735 CTGACCTTTTTGCTACCGCC 59.478 55.000 0.00 0.00 34.43 6.13
102 103 1.519408 TCTGACCTTTTTGCTACCGC 58.481 50.000 0.00 0.00 0.00 5.68
103 104 3.600388 AGATCTGACCTTTTTGCTACCG 58.400 45.455 0.00 0.00 0.00 4.02
104 105 5.003804 TCAAGATCTGACCTTTTTGCTACC 58.996 41.667 0.00 0.00 0.00 3.18
105 106 6.560253 TTCAAGATCTGACCTTTTTGCTAC 57.440 37.500 0.00 0.00 32.21 3.58
106 107 7.765695 AATTCAAGATCTGACCTTTTTGCTA 57.234 32.000 0.00 0.00 32.21 3.49
107 108 6.661304 AATTCAAGATCTGACCTTTTTGCT 57.339 33.333 0.00 0.00 32.21 3.91
108 109 7.719778 AAAATTCAAGATCTGACCTTTTTGC 57.280 32.000 0.00 0.00 30.38 3.68
165 166 9.138062 GCAAATTTTTGTGTTTTGATCCTTTTT 57.862 25.926 5.05 0.00 40.24 1.94
166 167 7.758980 GGCAAATTTTTGTGTTTTGATCCTTTT 59.241 29.630 5.05 0.00 40.24 2.27
167 168 7.094032 TGGCAAATTTTTGTGTTTTGATCCTTT 60.094 29.630 5.05 0.00 40.24 3.11
168 169 6.376581 TGGCAAATTTTTGTGTTTTGATCCTT 59.623 30.769 5.05 0.00 40.24 3.36
169 170 5.884792 TGGCAAATTTTTGTGTTTTGATCCT 59.115 32.000 5.05 0.00 40.24 3.24
170 171 5.970612 GTGGCAAATTTTTGTGTTTTGATCC 59.029 36.000 5.05 0.00 40.24 3.36
171 172 5.970612 GGTGGCAAATTTTTGTGTTTTGATC 59.029 36.000 5.05 0.00 40.24 2.92
172 173 5.448360 CGGTGGCAAATTTTTGTGTTTTGAT 60.448 36.000 5.05 0.00 40.24 2.57
173 174 4.142816 CGGTGGCAAATTTTTGTGTTTTGA 60.143 37.500 5.05 0.00 40.24 2.69
174 175 4.094212 CGGTGGCAAATTTTTGTGTTTTG 58.906 39.130 5.05 0.00 40.24 2.44
175 176 3.127721 CCGGTGGCAAATTTTTGTGTTTT 59.872 39.130 0.00 0.00 40.24 2.43
176 177 2.680339 CCGGTGGCAAATTTTTGTGTTT 59.320 40.909 0.00 0.00 40.24 2.83
177 178 2.284190 CCGGTGGCAAATTTTTGTGTT 58.716 42.857 0.00 0.00 40.24 3.32
178 179 1.474143 CCCGGTGGCAAATTTTTGTGT 60.474 47.619 0.00 0.00 40.24 3.72
179 180 1.224965 CCCGGTGGCAAATTTTTGTG 58.775 50.000 0.00 0.00 40.24 3.33
180 181 3.696306 CCCGGTGGCAAATTTTTGT 57.304 47.368 0.00 0.00 40.24 2.83
194 195 4.899239 GATCCTGCACTCGCCCGG 62.899 72.222 0.00 0.00 37.32 5.73
196 197 4.899239 CCGATCCTGCACTCGCCC 62.899 72.222 3.64 0.00 37.32 6.13
207 208 3.908081 TAAGGTCGCCGCCGATCC 61.908 66.667 0.00 0.00 45.60 3.36
208 209 2.657620 GTAAGGTCGCCGCCGATC 60.658 66.667 0.00 0.00 46.38 3.69
209 210 4.217159 GGTAAGGTCGCCGCCGAT 62.217 66.667 0.00 0.00 46.38 4.18
215 216 0.109319 TACGAAACGGTAAGGTCGCC 60.109 55.000 0.00 0.00 35.67 5.54
216 217 0.984829 GTACGAAACGGTAAGGTCGC 59.015 55.000 0.00 0.00 35.67 5.19
217 218 2.619013 AGTACGAAACGGTAAGGTCG 57.381 50.000 0.00 0.00 37.47 4.79
218 219 2.409715 GCAAGTACGAAACGGTAAGGTC 59.590 50.000 0.00 0.00 0.00 3.85
219 220 2.224018 TGCAAGTACGAAACGGTAAGGT 60.224 45.455 0.00 0.00 0.00 3.50
220 221 2.406130 TGCAAGTACGAAACGGTAAGG 58.594 47.619 0.00 0.00 0.00 2.69
221 222 3.676172 TCATGCAAGTACGAAACGGTAAG 59.324 43.478 0.00 0.00 0.00 2.34
222 223 3.651206 TCATGCAAGTACGAAACGGTAA 58.349 40.909 0.00 0.00 0.00 2.85
223 224 3.300852 TCATGCAAGTACGAAACGGTA 57.699 42.857 0.00 0.00 0.00 4.02
224 225 2.157834 TCATGCAAGTACGAAACGGT 57.842 45.000 0.00 0.00 0.00 4.83
225 226 2.787723 GCATCATGCAAGTACGAAACGG 60.788 50.000 4.20 0.00 44.26 4.44
245 246 4.409218 CGTGCATGGTGCTGGTGC 62.409 66.667 0.00 0.00 45.31 5.01
246 247 3.740397 CCGTGCATGGTGCTGGTG 61.740 66.667 17.42 0.00 45.31 4.17
247 248 4.269523 ACCGTGCATGGTGCTGGT 62.270 61.111 29.84 3.44 45.31 4.00
248 249 3.434319 GACCGTGCATGGTGCTGG 61.434 66.667 34.99 5.65 45.31 4.85
249 250 3.792047 CGACCGTGCATGGTGCTG 61.792 66.667 34.99 19.58 45.31 4.41
278 279 0.882474 GATCCCTCTACGATCACGGG 59.118 60.000 0.00 0.00 44.46 5.28
280 281 2.222886 ACTGATCCCTCTACGATCACG 58.777 52.381 0.00 0.00 40.88 4.35
283 284 2.224549 CGTGACTGATCCCTCTACGATC 59.775 54.545 0.00 0.00 37.29 3.69
284 285 2.222886 CGTGACTGATCCCTCTACGAT 58.777 52.381 0.00 0.00 32.36 3.73
285 286 1.065636 ACGTGACTGATCCCTCTACGA 60.066 52.381 11.71 0.00 34.52 3.43
286 287 1.380524 ACGTGACTGATCCCTCTACG 58.619 55.000 0.00 0.00 36.28 3.51
288 289 4.157289 GTGTTTACGTGACTGATCCCTCTA 59.843 45.833 0.00 0.00 0.00 2.43
289 290 3.056749 GTGTTTACGTGACTGATCCCTCT 60.057 47.826 0.00 0.00 0.00 3.69
290 291 3.056749 AGTGTTTACGTGACTGATCCCTC 60.057 47.826 0.00 0.00 0.00 4.30
291 292 2.897969 AGTGTTTACGTGACTGATCCCT 59.102 45.455 0.00 0.00 0.00 4.20
292 293 3.314541 AGTGTTTACGTGACTGATCCC 57.685 47.619 0.00 0.00 0.00 3.85
293 294 5.668558 AAAAGTGTTTACGTGACTGATCC 57.331 39.130 0.00 0.00 0.00 3.36
361 364 2.805671 TGTGTGCATCAAGTCTTTACGG 59.194 45.455 0.00 0.00 0.00 4.02
389 392 7.712204 TTTCCCTCAAAACAAAGTCTTTACT 57.288 32.000 0.00 0.00 37.65 2.24
390 393 8.766000 TTTTTCCCTCAAAACAAAGTCTTTAC 57.234 30.769 0.00 0.00 33.47 2.01
484 490 9.908152 GTATGTAGCTGTTTTTCCAGTTTAATT 57.092 29.630 0.00 0.00 34.84 1.40
485 491 9.073475 TGTATGTAGCTGTTTTTCCAGTTTAAT 57.927 29.630 0.00 0.00 34.84 1.40
486 492 8.347035 GTGTATGTAGCTGTTTTTCCAGTTTAA 58.653 33.333 0.00 0.00 34.84 1.52
487 493 7.307514 CGTGTATGTAGCTGTTTTTCCAGTTTA 60.308 37.037 0.00 0.00 34.84 2.01
488 494 6.512741 CGTGTATGTAGCTGTTTTTCCAGTTT 60.513 38.462 0.00 0.00 34.84 2.66
489 495 5.049680 CGTGTATGTAGCTGTTTTTCCAGTT 60.050 40.000 0.00 0.00 34.84 3.16
490 496 4.451096 CGTGTATGTAGCTGTTTTTCCAGT 59.549 41.667 0.00 0.00 34.84 4.00
491 497 4.142902 CCGTGTATGTAGCTGTTTTTCCAG 60.143 45.833 0.00 0.00 35.49 3.86
492 498 3.749088 CCGTGTATGTAGCTGTTTTTCCA 59.251 43.478 0.00 0.00 0.00 3.53
493 499 3.425758 GCCGTGTATGTAGCTGTTTTTCC 60.426 47.826 0.00 0.00 0.00 3.13
494 500 3.723835 CGCCGTGTATGTAGCTGTTTTTC 60.724 47.826 0.00 0.00 0.00 2.29
495 501 2.158841 CGCCGTGTATGTAGCTGTTTTT 59.841 45.455 0.00 0.00 0.00 1.94
496 502 1.730064 CGCCGTGTATGTAGCTGTTTT 59.270 47.619 0.00 0.00 0.00 2.43
503 509 0.738063 TGCAACCGCCGTGTATGTAG 60.738 55.000 0.00 0.00 37.32 2.74
517 523 0.950555 TCAGGAGTCGTGCATGCAAC 60.951 55.000 24.58 18.32 0.00 4.17
519 525 0.036105 AATCAGGAGTCGTGCATGCA 60.036 50.000 18.46 18.46 0.00 3.96
524 530 3.703420 ACGTATAAATCAGGAGTCGTGC 58.297 45.455 7.98 0.00 0.00 5.34
529 535 6.381994 TGGTTTCCTACGTATAAATCAGGAGT 59.618 38.462 10.75 0.00 36.77 3.85
539 545 4.462483 AGTTCGGTTGGTTTCCTACGTATA 59.538 41.667 0.00 0.00 30.33 1.47
540 546 3.259123 AGTTCGGTTGGTTTCCTACGTAT 59.741 43.478 0.00 0.00 30.33 3.06
581 587 4.633175 TGTGTCTGTACCGATGCTAAAAA 58.367 39.130 0.00 0.00 0.00 1.94
582 588 4.260139 TGTGTCTGTACCGATGCTAAAA 57.740 40.909 0.00 0.00 0.00 1.52
583 589 3.945981 TGTGTCTGTACCGATGCTAAA 57.054 42.857 0.00 0.00 0.00 1.85
584 590 3.845178 CTTGTGTCTGTACCGATGCTAA 58.155 45.455 0.00 0.00 0.00 3.09
585 591 2.416836 GCTTGTGTCTGTACCGATGCTA 60.417 50.000 0.00 0.00 0.00 3.49
586 592 1.673033 GCTTGTGTCTGTACCGATGCT 60.673 52.381 0.00 0.00 0.00 3.79
587 593 0.721718 GCTTGTGTCTGTACCGATGC 59.278 55.000 0.00 0.00 0.00 3.91
588 594 0.992072 CGCTTGTGTCTGTACCGATG 59.008 55.000 0.00 0.00 0.00 3.84
589 595 0.736325 GCGCTTGTGTCTGTACCGAT 60.736 55.000 0.00 0.00 0.00 4.18
590 596 1.372499 GCGCTTGTGTCTGTACCGA 60.372 57.895 0.00 0.00 0.00 4.69
591 597 1.344942 GAGCGCTTGTGTCTGTACCG 61.345 60.000 13.26 0.00 0.00 4.02
592 598 0.319555 TGAGCGCTTGTGTCTGTACC 60.320 55.000 13.26 0.00 0.00 3.34
593 599 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
594 600 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
595 601 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
596 602 4.322009 CGTATATATGAGCGCTTGTGTCTG 59.678 45.833 13.26 0.00 0.00 3.51
597 603 4.476862 CGTATATATGAGCGCTTGTGTCT 58.523 43.478 13.26 0.00 0.00 3.41
598 604 3.059570 GCGTATATATGAGCGCTTGTGTC 59.940 47.826 13.26 0.00 45.48 3.67
599 605 2.987149 GCGTATATATGAGCGCTTGTGT 59.013 45.455 13.26 4.27 45.48 3.72
600 606 2.026860 CGCGTATATATGAGCGCTTGTG 59.973 50.000 13.26 6.56 46.56 3.33
601 607 2.251040 CGCGTATATATGAGCGCTTGT 58.749 47.619 13.26 5.98 46.56 3.16
602 608 2.959586 CGCGTATATATGAGCGCTTG 57.040 50.000 13.26 7.35 46.56 4.01
607 613 4.352039 AGTGTATGCGCGTATATATGAGC 58.648 43.478 19.79 20.14 38.31 4.26
608 614 5.452623 GTGAGTGTATGCGCGTATATATGAG 59.547 44.000 19.79 3.76 0.00 2.90
609 615 5.329493 GTGAGTGTATGCGCGTATATATGA 58.671 41.667 19.79 3.29 0.00 2.15
610 616 4.499399 GGTGAGTGTATGCGCGTATATATG 59.501 45.833 19.79 0.00 0.00 1.78
611 617 4.439700 GGGTGAGTGTATGCGCGTATATAT 60.440 45.833 19.79 9.03 0.00 0.86
612 618 3.119743 GGGTGAGTGTATGCGCGTATATA 60.120 47.826 19.79 14.59 0.00 0.86
613 619 2.352421 GGGTGAGTGTATGCGCGTATAT 60.352 50.000 19.79 4.31 0.00 0.86
614 620 1.001048 GGGTGAGTGTATGCGCGTATA 60.001 52.381 13.13 13.13 0.00 1.47
615 621 0.249322 GGGTGAGTGTATGCGCGTAT 60.249 55.000 15.52 15.52 0.00 3.06
616 622 1.140161 GGGTGAGTGTATGCGCGTA 59.860 57.895 8.43 4.92 0.00 4.42
617 623 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
618 624 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
619 625 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
620 626 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
621 627 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
622 628 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
623 629 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
624 630 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
625 631 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
626 632 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
627 633 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
628 634 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
629 635 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
630 636 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
631 637 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
632 638 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
633 639 0.669318 ACGTGTGTGCGTTCATAGGG 60.669 55.000 0.00 0.00 43.04 3.53
634 640 1.652124 GTACGTGTGTGCGTTCATAGG 59.348 52.381 0.00 0.00 43.04 2.57
635 641 2.090041 GTGTACGTGTGTGCGTTCATAG 59.910 50.000 0.00 0.00 43.04 2.23
636 642 2.052891 GTGTACGTGTGTGCGTTCATA 58.947 47.619 0.00 0.00 43.04 2.15
637 643 0.856641 GTGTACGTGTGTGCGTTCAT 59.143 50.000 0.00 0.00 43.04 2.57
638 644 1.146957 GGTGTACGTGTGTGCGTTCA 61.147 55.000 0.00 0.00 43.04 3.18
639 645 1.561250 GGTGTACGTGTGTGCGTTC 59.439 57.895 0.00 0.00 43.04 3.95
640 646 1.884004 GGGTGTACGTGTGTGCGTT 60.884 57.895 0.00 0.00 43.04 4.84
642 648 1.005294 GTAGGGTGTACGTGTGTGCG 61.005 60.000 0.00 0.00 32.77 5.34
643 649 0.668401 GGTAGGGTGTACGTGTGTGC 60.668 60.000 0.00 0.00 0.00 4.57
644 650 0.037975 GGGTAGGGTGTACGTGTGTG 60.038 60.000 0.00 0.00 0.00 3.82
645 651 1.187567 GGGGTAGGGTGTACGTGTGT 61.188 60.000 0.00 0.00 0.00 3.72
646 652 0.901580 AGGGGTAGGGTGTACGTGTG 60.902 60.000 0.00 0.00 0.00 3.82
647 653 0.704076 TAGGGGTAGGGTGTACGTGT 59.296 55.000 0.00 0.00 0.00 4.49
648 654 1.684983 CATAGGGGTAGGGTGTACGTG 59.315 57.143 0.00 0.00 0.00 4.49
649 655 1.570501 TCATAGGGGTAGGGTGTACGT 59.429 52.381 0.00 0.00 0.00 3.57
650 656 2.236766 CTCATAGGGGTAGGGTGTACG 58.763 57.143 0.00 0.00 0.00 3.67
651 657 1.969208 GCTCATAGGGGTAGGGTGTAC 59.031 57.143 0.00 0.00 0.00 2.90
652 658 1.576757 TGCTCATAGGGGTAGGGTGTA 59.423 52.381 0.00 0.00 0.00 2.90
653 659 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
654 660 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
655 661 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
656 662 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
657 663 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
658 664 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
659 665 0.639943 TGGAGGTGCTCATAGGGGTA 59.360 55.000 0.00 0.00 31.08 3.69
660 666 0.692419 CTGGAGGTGCTCATAGGGGT 60.692 60.000 0.00 0.00 31.08 4.95
661 667 0.399091 TCTGGAGGTGCTCATAGGGG 60.399 60.000 0.00 0.00 31.08 4.79
662 668 1.047002 CTCTGGAGGTGCTCATAGGG 58.953 60.000 0.00 0.00 31.08 3.53
663 669 1.686052 GTCTCTGGAGGTGCTCATAGG 59.314 57.143 0.00 0.00 31.08 2.57
664 670 2.361757 CAGTCTCTGGAGGTGCTCATAG 59.638 54.545 0.00 0.00 31.08 2.23
665 671 2.024941 TCAGTCTCTGGAGGTGCTCATA 60.025 50.000 0.00 0.00 31.08 2.15
666 672 1.193323 CAGTCTCTGGAGGTGCTCAT 58.807 55.000 0.00 0.00 31.08 2.90
667 673 0.113190 TCAGTCTCTGGAGGTGCTCA 59.887 55.000 0.00 0.00 31.08 4.26
668 674 0.817013 CTCAGTCTCTGGAGGTGCTC 59.183 60.000 0.00 0.00 31.51 4.26
669 675 1.257055 GCTCAGTCTCTGGAGGTGCT 61.257 60.000 0.00 0.00 31.51 4.40
670 676 1.217779 GCTCAGTCTCTGGAGGTGC 59.782 63.158 0.00 0.00 31.51 5.01
671 677 1.896694 GGCTCAGTCTCTGGAGGTG 59.103 63.158 0.00 0.00 31.51 4.00
672 678 1.680651 CGGCTCAGTCTCTGGAGGT 60.681 63.158 0.00 0.00 31.51 3.85
673 679 2.422231 CCGGCTCAGTCTCTGGAGG 61.422 68.421 0.00 0.00 31.51 4.30
674 680 3.074999 GCCGGCTCAGTCTCTGGAG 62.075 68.421 22.15 0.00 31.51 3.86
675 681 3.071206 GCCGGCTCAGTCTCTGGA 61.071 66.667 22.15 0.00 31.51 3.86
676 682 1.395045 TATGCCGGCTCAGTCTCTGG 61.395 60.000 29.70 0.00 31.51 3.86
677 683 0.678395 ATATGCCGGCTCAGTCTCTG 59.322 55.000 29.70 0.00 0.00 3.35
678 684 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
679 685 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
680 686 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
681 687 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
682 688 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
683 689 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
684 690 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
685 691 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
686 692 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
687 693 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
688 694 6.820152 TCATAAATCTCAAGATGATATGCCGG 59.180 38.462 0.00 0.00 36.32 6.13
689 695 7.838771 TCATAAATCTCAAGATGATATGCCG 57.161 36.000 15.00 0.00 36.32 5.69
690 696 9.228949 ACTTCATAAATCTCAAGATGATATGCC 57.771 33.333 15.00 0.00 36.32 4.40
694 700 9.770097 GGTGACTTCATAAATCTCAAGATGATA 57.230 33.333 0.00 0.00 34.49 2.15
695 701 8.270030 TGGTGACTTCATAAATCTCAAGATGAT 58.730 33.333 0.00 0.00 34.49 2.45
696 702 7.623630 TGGTGACTTCATAAATCTCAAGATGA 58.376 34.615 0.00 0.00 34.49 2.92
697 703 7.854557 TGGTGACTTCATAAATCTCAAGATG 57.145 36.000 0.00 0.00 34.49 2.90
698 704 9.775854 CTATGGTGACTTCATAAATCTCAAGAT 57.224 33.333 0.00 0.00 36.07 2.40
699 705 8.206867 CCTATGGTGACTTCATAAATCTCAAGA 58.793 37.037 0.00 0.00 0.00 3.02
700 706 7.041508 GCCTATGGTGACTTCATAAATCTCAAG 60.042 40.741 0.00 0.00 0.00 3.02
701 707 6.767902 GCCTATGGTGACTTCATAAATCTCAA 59.232 38.462 0.00 0.00 0.00 3.02
702 708 6.291377 GCCTATGGTGACTTCATAAATCTCA 58.709 40.000 0.00 0.00 0.00 3.27
703 709 5.406780 CGCCTATGGTGACTTCATAAATCTC 59.593 44.000 0.00 0.00 34.74 2.75
704 710 5.300752 CGCCTATGGTGACTTCATAAATCT 58.699 41.667 0.00 0.00 34.74 2.40
705 711 4.083802 GCGCCTATGGTGACTTCATAAATC 60.084 45.833 0.00 0.00 34.74 2.17
706 712 3.815401 GCGCCTATGGTGACTTCATAAAT 59.185 43.478 0.00 0.00 34.74 1.40
707 713 3.202906 GCGCCTATGGTGACTTCATAAA 58.797 45.455 0.00 0.00 34.74 1.40
708 714 2.484770 GGCGCCTATGGTGACTTCATAA 60.485 50.000 22.15 0.00 38.38 1.90
709 715 1.070134 GGCGCCTATGGTGACTTCATA 59.930 52.381 22.15 0.00 38.38 2.15
710 716 0.179045 GGCGCCTATGGTGACTTCAT 60.179 55.000 22.15 0.00 38.38 2.57
711 717 1.220749 GGCGCCTATGGTGACTTCA 59.779 57.895 22.15 0.00 38.38 3.02
712 718 4.126524 GGCGCCTATGGTGACTTC 57.873 61.111 22.15 0.00 38.38 3.01
715 721 2.279517 CGAGGCGCCTATGGTGAC 60.280 66.667 32.97 14.51 42.50 3.67
716 722 2.758327 ACGAGGCGCCTATGGTGA 60.758 61.111 32.97 0.00 34.74 4.02
717 723 2.279517 GACGAGGCGCCTATGGTG 60.280 66.667 32.97 18.94 36.10 4.17
718 724 3.900892 CGACGAGGCGCCTATGGT 61.901 66.667 32.97 26.91 0.00 3.55
719 725 3.825833 GACGACGAGGCGCCTATGG 62.826 68.421 32.97 23.64 33.86 2.74
720 726 2.353607 GACGACGAGGCGCCTATG 60.354 66.667 32.97 27.02 33.86 2.23
743 749 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
744 750 1.420430 TTTCAGTGGGAGGAGACGTT 58.580 50.000 0.00 0.00 0.00 3.99
745 751 1.070289 GTTTTCAGTGGGAGGAGACGT 59.930 52.381 0.00 0.00 0.00 4.34
746 752 1.070134 TGTTTTCAGTGGGAGGAGACG 59.930 52.381 0.00 0.00 0.00 4.18
747 753 2.158813 TGTGTTTTCAGTGGGAGGAGAC 60.159 50.000 0.00 0.00 0.00 3.36
748 754 2.123589 TGTGTTTTCAGTGGGAGGAGA 58.876 47.619 0.00 0.00 0.00 3.71
749 755 2.638480 TGTGTTTTCAGTGGGAGGAG 57.362 50.000 0.00 0.00 0.00 3.69
750 756 2.549992 CGATGTGTTTTCAGTGGGAGGA 60.550 50.000 0.00 0.00 0.00 3.71
751 757 1.806542 CGATGTGTTTTCAGTGGGAGG 59.193 52.381 0.00 0.00 0.00 4.30
752 758 1.197721 GCGATGTGTTTTCAGTGGGAG 59.802 52.381 0.00 0.00 0.00 4.30
753 759 1.234821 GCGATGTGTTTTCAGTGGGA 58.765 50.000 0.00 0.00 0.00 4.37
754 760 0.240945 GGCGATGTGTTTTCAGTGGG 59.759 55.000 0.00 0.00 0.00 4.61
755 761 0.110238 CGGCGATGTGTTTTCAGTGG 60.110 55.000 0.00 0.00 0.00 4.00
756 762 0.110238 CCGGCGATGTGTTTTCAGTG 60.110 55.000 9.30 0.00 0.00 3.66
757 763 0.250124 TCCGGCGATGTGTTTTCAGT 60.250 50.000 9.30 0.00 0.00 3.41
758 764 0.871722 TTCCGGCGATGTGTTTTCAG 59.128 50.000 9.30 0.00 0.00 3.02
759 765 1.309950 TTTCCGGCGATGTGTTTTCA 58.690 45.000 9.30 0.00 0.00 2.69
760 766 2.515912 GATTTCCGGCGATGTGTTTTC 58.484 47.619 9.30 0.00 0.00 2.29
761 767 1.201414 GGATTTCCGGCGATGTGTTTT 59.799 47.619 9.30 0.00 0.00 2.43
762 768 0.808755 GGATTTCCGGCGATGTGTTT 59.191 50.000 9.30 0.00 0.00 2.83
763 769 0.035439 AGGATTTCCGGCGATGTGTT 60.035 50.000 9.30 0.00 42.08 3.32
764 770 0.744414 CAGGATTTCCGGCGATGTGT 60.744 55.000 9.30 0.00 42.08 3.72
765 771 0.461870 TCAGGATTTCCGGCGATGTG 60.462 55.000 9.30 0.00 42.08 3.21
766 772 0.251916 TTCAGGATTTCCGGCGATGT 59.748 50.000 9.30 0.00 42.08 3.06
767 773 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
768 774 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
769 775 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
770 776 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
771 777 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
772 778 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
780 786 7.954835 TGCATTATTCCTGGATTTATTTCAGG 58.045 34.615 0.00 0.00 46.91 3.86
781 787 9.472361 CTTGCATTATTCCTGGATTTATTTCAG 57.528 33.333 0.00 0.00 0.00 3.02
782 788 7.927629 GCTTGCATTATTCCTGGATTTATTTCA 59.072 33.333 0.00 0.00 0.00 2.69
783 789 7.115378 CGCTTGCATTATTCCTGGATTTATTTC 59.885 37.037 0.00 0.00 0.00 2.17
784 790 6.925165 CGCTTGCATTATTCCTGGATTTATTT 59.075 34.615 0.00 0.00 0.00 1.40
785 791 6.265196 TCGCTTGCATTATTCCTGGATTTATT 59.735 34.615 0.00 0.00 0.00 1.40
786 792 5.769662 TCGCTTGCATTATTCCTGGATTTAT 59.230 36.000 0.00 0.00 0.00 1.40
787 793 5.129634 TCGCTTGCATTATTCCTGGATTTA 58.870 37.500 0.00 0.00 0.00 1.40
788 794 3.953612 TCGCTTGCATTATTCCTGGATTT 59.046 39.130 0.00 0.00 0.00 2.17
789 795 3.554934 TCGCTTGCATTATTCCTGGATT 58.445 40.909 0.00 0.00 0.00 3.01
790 796 3.213206 TCGCTTGCATTATTCCTGGAT 57.787 42.857 0.00 0.00 0.00 3.41
791 797 2.708216 TCGCTTGCATTATTCCTGGA 57.292 45.000 0.00 0.00 0.00 3.86
792 798 2.684881 ACTTCGCTTGCATTATTCCTGG 59.315 45.455 0.00 0.00 0.00 4.45
793 799 4.100529 CAACTTCGCTTGCATTATTCCTG 58.899 43.478 0.00 0.00 0.00 3.86
794 800 3.758554 ACAACTTCGCTTGCATTATTCCT 59.241 39.130 0.00 0.00 0.00 3.36
795 801 4.096732 ACAACTTCGCTTGCATTATTCC 57.903 40.909 0.00 0.00 0.00 3.01
796 802 5.225129 CGTTACAACTTCGCTTGCATTATTC 59.775 40.000 0.00 0.00 0.00 1.75
797 803 5.086058 CGTTACAACTTCGCTTGCATTATT 58.914 37.500 0.00 0.00 0.00 1.40
798 804 4.153475 ACGTTACAACTTCGCTTGCATTAT 59.847 37.500 0.00 0.00 0.00 1.28
799 805 3.495377 ACGTTACAACTTCGCTTGCATTA 59.505 39.130 0.00 0.00 0.00 1.90
800 806 2.289547 ACGTTACAACTTCGCTTGCATT 59.710 40.909 0.00 0.00 0.00 3.56
850 862 6.039717 TCTCTAACCCGTACTACGCAATAATT 59.960 38.462 2.87 0.00 40.91 1.40
879 901 4.455877 CCAGGTGATTAATCTAATTCGGGC 59.544 45.833 16.24 0.00 0.00 6.13
1338 1363 2.510012 TTGCAGGCGCGATCTGAG 60.510 61.111 26.48 8.07 42.97 3.35
1341 1366 1.519455 GTACTTGCAGGCGCGATCT 60.519 57.895 12.10 2.76 42.97 2.75
1937 1983 1.804396 CTCCGCGATCTCCATGAGCT 61.804 60.000 8.23 0.00 0.00 4.09
2216 2311 6.989437 TCGAACAGAAAACAAAGCTATATCG 58.011 36.000 0.00 0.00 0.00 2.92
2217 2312 7.905493 CCTTCGAACAGAAAACAAAGCTATATC 59.095 37.037 0.00 0.00 38.57 1.63
2238 2337 9.685005 CTAATTAACTACAAAATTCGACCTTCG 57.315 33.333 0.00 0.00 42.10 3.79
2253 2352 8.395633 CAGCACACCAATAACCTAATTAACTAC 58.604 37.037 0.00 0.00 0.00 2.73
2346 2447 4.053067 GACGATGACACGACGACC 57.947 61.111 0.00 0.00 37.03 4.79
2350 2451 0.165295 TCTCACGACGATGACACGAC 59.835 55.000 0.00 0.00 37.03 4.34
2385 2489 5.671493 ACATGACCAATAGCCTAACTACAC 58.329 41.667 0.00 0.00 32.32 2.90
2407 2511 6.259550 ACTCAAGGCAATCAAATTGTAGAC 57.740 37.500 1.99 0.00 42.20 2.59
2410 2514 5.695816 GCAAACTCAAGGCAATCAAATTGTA 59.304 36.000 1.99 0.00 42.20 2.41
2447 2553 6.966632 TGAAAGCAAATTCTTACATATCACGC 59.033 34.615 0.00 0.00 0.00 5.34
2449 2555 7.962918 ACGTGAAAGCAAATTCTTACATATCAC 59.037 33.333 0.00 0.00 30.96 3.06
2471 3133 3.125698 ACGAAAACCAAGAACAACGTG 57.874 42.857 0.00 0.00 0.00 4.49
2472 3134 3.058085 ACAACGAAAACCAAGAACAACGT 60.058 39.130 0.00 0.00 0.00 3.99
2473 3135 3.494232 ACAACGAAAACCAAGAACAACG 58.506 40.909 0.00 0.00 0.00 4.10
2475 3137 5.379732 AGAACAACGAAAACCAAGAACAA 57.620 34.783 0.00 0.00 0.00 2.83
2492 3154 3.745799 TCATAACCCAGCGAAAAGAACA 58.254 40.909 0.00 0.00 0.00 3.18
2494 3156 4.394729 AGTTCATAACCCAGCGAAAAGAA 58.605 39.130 0.00 0.00 0.00 2.52
2496 3158 4.475944 CAAGTTCATAACCCAGCGAAAAG 58.524 43.478 0.00 0.00 0.00 2.27
2545 3208 8.858003 TCTCTGTAGATTAAGCGACAAATAAG 57.142 34.615 8.03 4.24 0.00 1.73
2561 3224 7.732025 TGTGTTTCCTTTGTAATCTCTGTAGA 58.268 34.615 0.00 0.00 35.80 2.59
2563 3226 7.732025 TCTGTGTTTCCTTTGTAATCTCTGTA 58.268 34.615 0.00 0.00 0.00 2.74
2579 3242 4.024048 TCGCTTTTTCCATCTCTGTGTTTC 60.024 41.667 0.00 0.00 0.00 2.78
2616 3279 5.355630 TCATGTTTTTCTTCTCGGTGTTTGA 59.644 36.000 0.00 0.00 0.00 2.69
2624 3288 5.673337 TCTTGGTCATGTTTTTCTTCTCG 57.327 39.130 0.00 0.00 0.00 4.04
2640 3304 4.229812 CCCTTAGACCCCTAATTTCTTGGT 59.770 45.833 0.00 0.00 34.62 3.67
2656 3320 0.611714 GACGCAAACCCTCCCTTAGA 59.388 55.000 0.00 0.00 0.00 2.10
2668 3332 6.711645 ACCCTATAACTTAAAACTGACGCAAA 59.288 34.615 0.00 0.00 0.00 3.68
2672 3336 9.245962 CAGATACCCTATAACTTAAAACTGACG 57.754 37.037 0.00 0.00 0.00 4.35
2692 3356 3.322254 ACCCGATGATCAACCTCAGATAC 59.678 47.826 0.00 0.00 0.00 2.24
2715 3379 2.953466 GCACCATGCATTGTCTCAAT 57.047 45.000 0.00 0.00 44.26 2.57
2731 3395 0.675633 ACAACAATTGGGCTGAGCAC 59.324 50.000 6.82 1.95 34.12 4.40
2764 3428 1.272769 AGGTCCGTCAGTTACTTCAGC 59.727 52.381 0.00 0.00 0.00 4.26
2799 3463 2.112928 TGTGACGCCAATGCTGGT 59.887 55.556 0.00 0.00 45.53 4.00
2814 3478 8.397906 CACAGGATACGATTTAATTTGATGTGT 58.602 33.333 0.00 0.00 46.39 3.72
2821 3485 9.634163 GGAAAAACACAGGATACGATTTAATTT 57.366 29.630 0.00 0.00 46.39 1.82
2831 3495 6.695713 GTGTCAAAAGGAAAAACACAGGATAC 59.304 38.462 0.00 0.00 39.91 2.24
2838 3502 6.533185 CAATGTGTGTCAAAAGGAAAAACAC 58.467 36.000 0.00 0.00 40.42 3.32
2845 3509 3.023119 AGTGCAATGTGTGTCAAAAGGA 58.977 40.909 0.00 0.00 0.00 3.36
2846 3510 3.117794 CAGTGCAATGTGTGTCAAAAGG 58.882 45.455 5.87 0.00 0.00 3.11
2883 4627 8.408601 GCATGCCTTCTTCATTATTTTCTTCTA 58.591 33.333 6.36 0.00 0.00 2.10
2885 4629 7.037438 TGCATGCCTTCTTCATTATTTTCTTC 58.963 34.615 16.68 0.00 0.00 2.87
2888 4632 7.781548 ATTGCATGCCTTCTTCATTATTTTC 57.218 32.000 16.68 0.00 0.00 2.29
2893 4637 5.918426 TGAATTGCATGCCTTCTTCATTA 57.082 34.783 22.97 6.57 0.00 1.90
2913 4657 5.044476 ACAGGGGTACCATTATCATGTTTGA 60.044 40.000 15.35 0.00 44.85 2.69
2926 4670 4.722837 TGTTCAGGAAAACAGGGGTACCA 61.723 47.826 15.35 0.00 41.97 3.25
2927 4671 2.158579 TGTTCAGGAAAACAGGGGTACC 60.159 50.000 2.17 2.17 40.37 3.34
2969 4713 2.566913 TGACGGTGTACAAATTGCTGT 58.433 42.857 0.00 0.00 0.00 4.40
2993 4737 2.369860 ACAAGCTCTGACTGAATGGTCA 59.630 45.455 0.00 0.00 42.96 4.02
2996 4740 3.405831 TGAACAAGCTCTGACTGAATGG 58.594 45.455 0.00 0.00 0.00 3.16
3005 4749 1.998315 CACCGATCTGAACAAGCTCTG 59.002 52.381 0.00 0.00 0.00 3.35
3006 4750 1.620819 ACACCGATCTGAACAAGCTCT 59.379 47.619 0.00 0.00 0.00 4.09
3016 4760 0.789383 GCGCGAAAAACACCGATCTG 60.789 55.000 12.10 0.00 0.00 2.90
3022 4766 1.082104 CAGAGGCGCGAAAAACACC 60.082 57.895 12.10 0.00 0.00 4.16
3034 4778 1.889573 GATTACCAGCGCCAGAGGC 60.890 63.158 2.29 0.00 46.75 4.70
3035 4779 0.531532 CAGATTACCAGCGCCAGAGG 60.532 60.000 2.29 3.66 0.00 3.69
3036 4780 1.156645 GCAGATTACCAGCGCCAGAG 61.157 60.000 2.29 0.00 0.00 3.35
3037 4781 1.153369 GCAGATTACCAGCGCCAGA 60.153 57.895 2.29 0.00 0.00 3.86
3038 4782 0.745845 AAGCAGATTACCAGCGCCAG 60.746 55.000 2.29 0.00 0.00 4.85
3039 4783 0.744414 GAAGCAGATTACCAGCGCCA 60.744 55.000 2.29 0.00 0.00 5.69
3040 4784 1.440145 GGAAGCAGATTACCAGCGCC 61.440 60.000 2.29 0.00 0.00 6.53
3041 4785 1.440145 GGGAAGCAGATTACCAGCGC 61.440 60.000 0.00 0.00 42.26 5.92
3042 4786 1.154205 CGGGAAGCAGATTACCAGCG 61.154 60.000 0.00 0.00 42.96 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.