Multiple sequence alignment - TraesCS2D01G497900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G497900 chr2D 100.000 2556 0 0 1 2556 593516694 593519249 0.000000e+00 4721.0
1 TraesCS2D01G497900 chr2D 86.486 259 33 2 1 258 155775544 155775801 1.500000e-72 283.0
2 TraesCS2D01G497900 chr2A 90.648 802 31 17 1001 1792 728414217 728414984 0.000000e+00 1026.0
3 TraesCS2D01G497900 chr2A 86.762 559 56 14 1973 2527 728415812 728416356 7.820000e-170 606.0
4 TraesCS2D01G497900 chr2B 89.946 736 31 13 1001 1722 719980024 719980730 0.000000e+00 909.0
5 TraesCS2D01G497900 chr2B 85.353 553 38 15 403 948 719979493 719980009 1.350000e-147 532.0
6 TraesCS2D01G497900 chr2B 82.698 630 70 18 1711 2324 719980823 719981429 8.100000e-145 523.0
7 TraesCS2D01G497900 chr2B 90.566 53 2 2 421 473 385535623 385535574 1.640000e-07 67.6
8 TraesCS2D01G497900 chr5D 89.189 259 27 1 1 258 47520390 47520648 3.170000e-84 322.0
9 TraesCS2D01G497900 chr5D 88.123 261 26 3 1 258 293375200 293375458 3.190000e-79 305.0
10 TraesCS2D01G497900 chr7D 88.846 260 25 3 1 258 541970406 541970663 1.480000e-82 316.0
11 TraesCS2D01G497900 chr1B 86.590 261 30 5 1 258 684072412 684072670 1.500000e-72 283.0
12 TraesCS2D01G497900 chr5A 86.486 259 31 4 1 258 46498371 46498626 5.380000e-72 281.0
13 TraesCS2D01G497900 chr4A 87.500 248 26 4 1 247 147557636 147557879 5.380000e-72 281.0
14 TraesCS2D01G497900 chr7B 86.508 252 29 5 10 258 730912645 730912396 3.240000e-69 272.0
15 TraesCS2D01G497900 chr5B 85.496 262 33 5 1 258 429100826 429101086 4.190000e-68 268.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G497900 chr2D 593516694 593519249 2555 False 4721.000000 4721 100.000 1 2556 1 chr2D.!!$F2 2555
1 TraesCS2D01G497900 chr2A 728414217 728416356 2139 False 816.000000 1026 88.705 1001 2527 2 chr2A.!!$F1 1526
2 TraesCS2D01G497900 chr2B 719979493 719981429 1936 False 654.666667 909 85.999 403 2324 3 chr2B.!!$F1 1921

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
393 394 0.037232 GCTGCTTCACCGTACCTCTT 60.037 55.0 0.0 0.0 0.0 2.85 F
1168 1180 0.038251 TGCTCCTCTTACGTGCTGTG 60.038 55.0 0.0 0.0 0.0 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1387 1399 0.390472 CGTGCTTCTTCTCCTCCCAC 60.390 60.0 0.0 0.0 0.00 4.61 R
2307 3106 0.396139 ACGCATGGGCCTTTGATCAT 60.396 50.0 10.1 0.0 36.38 2.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 9.992910 AAAAGAGAAAATTTTGACAGAAATTGC 57.007 25.926 8.47 0.00 38.75 3.56
72 73 8.721019 AAGAGAAAATTTTGACAGAAATTGCA 57.279 26.923 8.47 0.00 38.75 4.08
73 74 8.134905 AGAGAAAATTTTGACAGAAATTGCAC 57.865 30.769 8.47 0.00 38.75 4.57
74 75 7.225341 AGAGAAAATTTTGACAGAAATTGCACC 59.775 33.333 8.47 0.00 38.75 5.01
75 76 6.260714 AGAAAATTTTGACAGAAATTGCACCC 59.739 34.615 8.47 0.00 38.75 4.61
76 77 3.467374 TTTTGACAGAAATTGCACCCC 57.533 42.857 0.00 0.00 0.00 4.95
77 78 1.337118 TTGACAGAAATTGCACCCCC 58.663 50.000 0.00 0.00 0.00 5.40
78 79 0.482446 TGACAGAAATTGCACCCCCT 59.518 50.000 0.00 0.00 0.00 4.79
79 80 1.133199 TGACAGAAATTGCACCCCCTT 60.133 47.619 0.00 0.00 0.00 3.95
80 81 1.970640 GACAGAAATTGCACCCCCTTT 59.029 47.619 0.00 0.00 0.00 3.11
81 82 1.970640 ACAGAAATTGCACCCCCTTTC 59.029 47.619 0.00 0.00 0.00 2.62
82 83 2.250924 CAGAAATTGCACCCCCTTTCT 58.749 47.619 0.00 0.00 38.21 2.52
83 84 2.232208 CAGAAATTGCACCCCCTTTCTC 59.768 50.000 0.00 0.00 36.16 2.87
84 85 1.550524 GAAATTGCACCCCCTTTCTCC 59.449 52.381 0.00 0.00 0.00 3.71
85 86 0.786435 AATTGCACCCCCTTTCTCCT 59.214 50.000 0.00 0.00 0.00 3.69
86 87 0.040204 ATTGCACCCCCTTTCTCCTG 59.960 55.000 0.00 0.00 0.00 3.86
87 88 1.360393 TTGCACCCCCTTTCTCCTGT 61.360 55.000 0.00 0.00 0.00 4.00
88 89 0.474854 TGCACCCCCTTTCTCCTGTA 60.475 55.000 0.00 0.00 0.00 2.74
89 90 0.919710 GCACCCCCTTTCTCCTGTAT 59.080 55.000 0.00 0.00 0.00 2.29
90 91 2.124411 GCACCCCCTTTCTCCTGTATA 58.876 52.381 0.00 0.00 0.00 1.47
91 92 2.158798 GCACCCCCTTTCTCCTGTATAC 60.159 54.545 0.00 0.00 0.00 1.47
92 93 2.438392 CACCCCCTTTCTCCTGTATACC 59.562 54.545 0.00 0.00 0.00 2.73
93 94 1.692519 CCCCCTTTCTCCTGTATACCG 59.307 57.143 0.00 0.00 0.00 4.02
94 95 2.395619 CCCCTTTCTCCTGTATACCGT 58.604 52.381 0.00 0.00 0.00 4.83
95 96 2.364647 CCCCTTTCTCCTGTATACCGTC 59.635 54.545 0.00 0.00 0.00 4.79
96 97 3.028850 CCCTTTCTCCTGTATACCGTCA 58.971 50.000 0.00 0.00 0.00 4.35
97 98 3.068307 CCCTTTCTCCTGTATACCGTCAG 59.932 52.174 0.00 0.00 0.00 3.51
98 99 3.952323 CCTTTCTCCTGTATACCGTCAGA 59.048 47.826 0.00 0.00 34.02 3.27
99 100 4.401519 CCTTTCTCCTGTATACCGTCAGAA 59.598 45.833 0.00 1.76 34.02 3.02
100 101 5.105473 CCTTTCTCCTGTATACCGTCAGAAA 60.105 44.000 13.45 13.45 34.02 2.52
101 102 6.407074 CCTTTCTCCTGTATACCGTCAGAAAT 60.407 42.308 14.05 0.00 34.02 2.17
102 103 6.540438 TTCTCCTGTATACCGTCAGAAATT 57.460 37.500 0.00 0.00 34.02 1.82
103 104 6.540438 TCTCCTGTATACCGTCAGAAATTT 57.460 37.500 0.00 0.00 34.02 1.82
104 105 6.338146 TCTCCTGTATACCGTCAGAAATTTG 58.662 40.000 0.00 0.00 34.02 2.32
105 106 6.153851 TCTCCTGTATACCGTCAGAAATTTGA 59.846 38.462 0.00 0.00 34.02 2.69
106 107 6.884832 TCCTGTATACCGTCAGAAATTTGAT 58.115 36.000 0.00 0.00 34.02 2.57
107 108 7.335627 TCCTGTATACCGTCAGAAATTTGATT 58.664 34.615 0.00 0.00 34.02 2.57
108 109 7.827236 TCCTGTATACCGTCAGAAATTTGATTT 59.173 33.333 0.00 0.00 34.02 2.17
109 110 8.458843 CCTGTATACCGTCAGAAATTTGATTTT 58.541 33.333 0.00 0.00 34.02 1.82
110 111 9.840427 CTGTATACCGTCAGAAATTTGATTTTT 57.160 29.630 0.00 0.00 34.02 1.94
135 136 9.517868 TTTTCTATACCCCAAAATAAAACGAGA 57.482 29.630 0.00 0.00 0.00 4.04
136 137 9.689501 TTTCTATACCCCAAAATAAAACGAGAT 57.310 29.630 0.00 0.00 0.00 2.75
137 138 9.689501 TTCTATACCCCAAAATAAAACGAGATT 57.310 29.630 0.00 0.00 0.00 2.40
138 139 9.689501 TCTATACCCCAAAATAAAACGAGATTT 57.310 29.630 0.00 0.00 0.00 2.17
139 140 9.946165 CTATACCCCAAAATAAAACGAGATTTC 57.054 33.333 0.00 0.00 0.00 2.17
140 141 6.911250 ACCCCAAAATAAAACGAGATTTCT 57.089 33.333 0.00 0.00 0.00 2.52
141 142 9.689501 ATACCCCAAAATAAAACGAGATTTCTA 57.310 29.630 0.00 0.00 0.00 2.10
142 143 7.823665 ACCCCAAAATAAAACGAGATTTCTAC 58.176 34.615 0.00 0.00 0.00 2.59
143 144 7.094075 ACCCCAAAATAAAACGAGATTTCTACC 60.094 37.037 0.00 0.00 0.00 3.18
144 145 6.964934 CCCAAAATAAAACGAGATTTCTACCG 59.035 38.462 0.00 0.00 0.00 4.02
145 146 7.148373 CCCAAAATAAAACGAGATTTCTACCGA 60.148 37.037 0.00 0.00 0.00 4.69
146 147 8.231837 CCAAAATAAAACGAGATTTCTACCGAA 58.768 33.333 0.00 0.00 0.00 4.30
147 148 9.601971 CAAAATAAAACGAGATTTCTACCGAAA 57.398 29.630 0.00 0.00 42.83 3.46
148 149 9.603298 AAAATAAAACGAGATTTCTACCGAAAC 57.397 29.630 0.00 0.00 41.58 2.78
149 150 8.543862 AATAAAACGAGATTTCTACCGAAACT 57.456 30.769 0.00 0.00 41.58 2.66
150 151 6.856135 AAAACGAGATTTCTACCGAAACTT 57.144 33.333 0.00 0.00 41.58 2.66
151 152 5.840940 AACGAGATTTCTACCGAAACTTG 57.159 39.130 0.00 0.00 41.58 3.16
152 153 3.678548 ACGAGATTTCTACCGAAACTTGC 59.321 43.478 0.00 0.00 41.58 4.01
153 154 3.062234 CGAGATTTCTACCGAAACTTGCC 59.938 47.826 0.00 0.00 41.58 4.52
154 155 4.000988 GAGATTTCTACCGAAACTTGCCA 58.999 43.478 0.00 0.00 41.58 4.92
155 156 4.589908 AGATTTCTACCGAAACTTGCCAT 58.410 39.130 0.00 0.00 41.58 4.40
156 157 5.010282 AGATTTCTACCGAAACTTGCCATT 58.990 37.500 0.00 0.00 41.58 3.16
157 158 4.497473 TTTCTACCGAAACTTGCCATTG 57.503 40.909 0.00 0.00 34.35 2.82
158 159 2.432444 TCTACCGAAACTTGCCATTGG 58.568 47.619 0.00 0.00 0.00 3.16
159 160 2.159382 CTACCGAAACTTGCCATTGGT 58.841 47.619 4.26 0.00 0.00 3.67
160 161 2.279935 ACCGAAACTTGCCATTGGTA 57.720 45.000 4.26 0.00 0.00 3.25
161 162 2.802719 ACCGAAACTTGCCATTGGTAT 58.197 42.857 4.26 0.00 0.00 2.73
162 163 3.161866 ACCGAAACTTGCCATTGGTATT 58.838 40.909 4.26 0.00 0.00 1.89
163 164 3.192633 ACCGAAACTTGCCATTGGTATTC 59.807 43.478 4.26 0.37 0.00 1.75
164 165 3.425404 CGAAACTTGCCATTGGTATTCG 58.575 45.455 11.74 11.74 33.52 3.34
165 166 3.730662 CGAAACTTGCCATTGGTATTCGG 60.731 47.826 15.86 2.55 35.92 4.30
166 167 2.799126 ACTTGCCATTGGTATTCGGA 57.201 45.000 4.26 0.00 0.00 4.55
167 168 3.080300 ACTTGCCATTGGTATTCGGAA 57.920 42.857 4.26 0.00 0.00 4.30
168 169 3.631250 ACTTGCCATTGGTATTCGGAAT 58.369 40.909 8.49 8.49 0.00 3.01
169 170 4.787551 ACTTGCCATTGGTATTCGGAATA 58.212 39.130 6.35 6.35 0.00 1.75
170 171 5.385198 ACTTGCCATTGGTATTCGGAATAT 58.615 37.500 13.18 0.00 0.00 1.28
171 172 5.241506 ACTTGCCATTGGTATTCGGAATATG 59.758 40.000 13.18 8.57 0.00 1.78
172 173 4.724399 TGCCATTGGTATTCGGAATATGT 58.276 39.130 13.18 0.00 0.00 2.29
173 174 5.870706 TGCCATTGGTATTCGGAATATGTA 58.129 37.500 13.18 3.16 0.00 2.29
174 175 6.480763 TGCCATTGGTATTCGGAATATGTAT 58.519 36.000 13.18 5.09 0.00 2.29
175 176 7.625469 TGCCATTGGTATTCGGAATATGTATA 58.375 34.615 13.18 0.09 0.00 1.47
176 177 8.271458 TGCCATTGGTATTCGGAATATGTATAT 58.729 33.333 13.18 2.13 0.00 0.86
177 178 8.559536 GCCATTGGTATTCGGAATATGTATATG 58.440 37.037 13.18 11.65 0.00 1.78
178 179 9.613428 CCATTGGTATTCGGAATATGTATATGT 57.387 33.333 13.18 0.00 0.00 2.29
187 188 8.018537 TCGGAATATGTATATGTATCCTTGGG 57.981 38.462 0.00 0.00 0.00 4.12
188 189 7.842236 TCGGAATATGTATATGTATCCTTGGGA 59.158 37.037 0.00 0.00 35.55 4.37
189 190 8.482943 CGGAATATGTATATGTATCCTTGGGAA 58.517 37.037 0.00 0.00 34.34 3.97
255 256 8.856490 AAATGTTTAAATATAGAAAGCAGCGG 57.144 30.769 0.00 0.00 0.00 5.52
256 257 7.801716 ATGTTTAAATATAGAAAGCAGCGGA 57.198 32.000 0.00 0.00 0.00 5.54
257 258 7.246674 TGTTTAAATATAGAAAGCAGCGGAG 57.753 36.000 0.00 0.00 0.00 4.63
258 259 7.045416 TGTTTAAATATAGAAAGCAGCGGAGA 58.955 34.615 0.00 0.00 0.00 3.71
259 260 7.011109 TGTTTAAATATAGAAAGCAGCGGAGAC 59.989 37.037 0.00 0.00 0.00 3.36
260 261 4.946478 AATATAGAAAGCAGCGGAGACT 57.054 40.909 0.00 0.00 0.00 3.24
261 262 6.406692 AAATATAGAAAGCAGCGGAGACTA 57.593 37.500 0.00 0.00 0.00 2.59
262 263 3.719173 ATAGAAAGCAGCGGAGACTAC 57.281 47.619 0.00 0.00 0.00 2.73
263 264 1.257743 AGAAAGCAGCGGAGACTACA 58.742 50.000 0.00 0.00 0.00 2.74
264 265 1.067495 AGAAAGCAGCGGAGACTACAC 60.067 52.381 0.00 0.00 0.00 2.90
265 266 0.679505 AAAGCAGCGGAGACTACACA 59.320 50.000 0.00 0.00 0.00 3.72
266 267 0.244994 AAGCAGCGGAGACTACACAG 59.755 55.000 0.00 0.00 0.00 3.66
267 268 0.609406 AGCAGCGGAGACTACACAGA 60.609 55.000 0.00 0.00 0.00 3.41
268 269 0.456995 GCAGCGGAGACTACACAGAC 60.457 60.000 0.00 0.00 0.00 3.51
269 270 0.881796 CAGCGGAGACTACACAGACA 59.118 55.000 0.00 0.00 0.00 3.41
270 271 0.882474 AGCGGAGACTACACAGACAC 59.118 55.000 0.00 0.00 0.00 3.67
271 272 0.109226 GCGGAGACTACACAGACACC 60.109 60.000 0.00 0.00 0.00 4.16
272 273 1.244816 CGGAGACTACACAGACACCA 58.755 55.000 0.00 0.00 29.98 4.17
273 274 1.611977 CGGAGACTACACAGACACCAA 59.388 52.381 0.00 0.00 29.98 3.67
274 275 2.351835 CGGAGACTACACAGACACCAAG 60.352 54.545 0.00 0.00 29.98 3.61
275 276 2.891580 GGAGACTACACAGACACCAAGA 59.108 50.000 0.00 0.00 29.98 3.02
276 277 3.511934 GGAGACTACACAGACACCAAGAT 59.488 47.826 0.00 0.00 29.98 2.40
277 278 4.489810 GAGACTACACAGACACCAAGATG 58.510 47.826 0.00 0.00 0.00 2.90
278 279 3.898123 AGACTACACAGACACCAAGATGT 59.102 43.478 0.00 0.00 34.78 3.06
279 280 5.077564 AGACTACACAGACACCAAGATGTA 58.922 41.667 0.00 0.00 31.24 2.29
280 281 5.717178 AGACTACACAGACACCAAGATGTAT 59.283 40.000 0.00 0.00 31.24 2.29
281 282 5.967088 ACTACACAGACACCAAGATGTATC 58.033 41.667 0.00 0.00 31.24 2.24
282 283 4.890158 ACACAGACACCAAGATGTATCA 57.110 40.909 0.00 0.00 31.24 2.15
283 284 4.825422 ACACAGACACCAAGATGTATCAG 58.175 43.478 0.00 0.00 31.24 2.90
284 285 3.620374 CACAGACACCAAGATGTATCAGC 59.380 47.826 0.00 0.00 31.24 4.26
285 286 3.261643 ACAGACACCAAGATGTATCAGCA 59.738 43.478 0.00 0.00 31.24 4.41
286 287 3.869832 CAGACACCAAGATGTATCAGCAG 59.130 47.826 0.00 0.00 31.24 4.24
287 288 3.771479 AGACACCAAGATGTATCAGCAGA 59.229 43.478 0.00 0.00 31.24 4.26
288 289 3.866651 ACACCAAGATGTATCAGCAGAC 58.133 45.455 0.00 0.00 0.00 3.51
289 290 3.517100 ACACCAAGATGTATCAGCAGACT 59.483 43.478 0.00 0.00 0.00 3.24
290 291 4.019860 ACACCAAGATGTATCAGCAGACTT 60.020 41.667 0.00 0.00 0.00 3.01
291 292 4.940046 CACCAAGATGTATCAGCAGACTTT 59.060 41.667 0.00 0.00 0.00 2.66
292 293 5.413833 CACCAAGATGTATCAGCAGACTTTT 59.586 40.000 0.00 0.00 0.00 2.27
293 294 5.645497 ACCAAGATGTATCAGCAGACTTTTC 59.355 40.000 0.00 0.00 0.00 2.29
294 295 5.879223 CCAAGATGTATCAGCAGACTTTTCT 59.121 40.000 0.00 0.00 0.00 2.52
295 296 6.373774 CCAAGATGTATCAGCAGACTTTTCTT 59.626 38.462 0.00 0.00 0.00 2.52
296 297 7.550551 CCAAGATGTATCAGCAGACTTTTCTTA 59.449 37.037 0.00 0.00 0.00 2.10
297 298 8.386606 CAAGATGTATCAGCAGACTTTTCTTAC 58.613 37.037 0.00 0.00 0.00 2.34
298 299 7.615403 AGATGTATCAGCAGACTTTTCTTACA 58.385 34.615 0.00 0.00 29.00 2.41
299 300 7.763528 AGATGTATCAGCAGACTTTTCTTACAG 59.236 37.037 0.00 0.00 28.29 2.74
300 301 6.759272 TGTATCAGCAGACTTTTCTTACAGT 58.241 36.000 0.00 0.00 0.00 3.55
301 302 6.646653 TGTATCAGCAGACTTTTCTTACAGTG 59.353 38.462 0.00 0.00 0.00 3.66
302 303 4.380531 TCAGCAGACTTTTCTTACAGTGG 58.619 43.478 0.00 0.00 0.00 4.00
303 304 4.130118 CAGCAGACTTTTCTTACAGTGGT 58.870 43.478 0.00 0.00 0.00 4.16
304 305 4.024556 CAGCAGACTTTTCTTACAGTGGTG 60.025 45.833 0.00 0.00 0.00 4.17
305 306 3.304057 GCAGACTTTTCTTACAGTGGTGC 60.304 47.826 0.00 0.00 0.00 5.01
306 307 3.876914 CAGACTTTTCTTACAGTGGTGCA 59.123 43.478 0.00 0.00 0.00 4.57
307 308 4.335315 CAGACTTTTCTTACAGTGGTGCAA 59.665 41.667 0.00 0.00 0.00 4.08
308 309 4.576463 AGACTTTTCTTACAGTGGTGCAAG 59.424 41.667 0.00 0.00 0.00 4.01
309 310 3.066760 ACTTTTCTTACAGTGGTGCAAGC 59.933 43.478 0.00 0.00 28.24 4.01
310 311 2.340210 TTCTTACAGTGGTGCAAGCA 57.660 45.000 0.00 0.00 45.41 3.91
329 330 4.143194 GCACATGCTGTAATATGCTCTG 57.857 45.455 0.00 0.00 38.21 3.35
330 331 3.811497 GCACATGCTGTAATATGCTCTGA 59.189 43.478 0.00 0.00 38.21 3.27
331 332 4.319333 GCACATGCTGTAATATGCTCTGAC 60.319 45.833 0.00 0.00 38.21 3.51
332 333 4.053983 ACATGCTGTAATATGCTCTGACG 58.946 43.478 0.00 0.00 0.00 4.35
333 334 3.097877 TGCTGTAATATGCTCTGACGG 57.902 47.619 0.00 0.00 0.00 4.79
334 335 2.430694 TGCTGTAATATGCTCTGACGGT 59.569 45.455 0.00 0.00 0.00 4.83
335 336 3.053455 GCTGTAATATGCTCTGACGGTC 58.947 50.000 0.00 0.00 0.00 4.79
336 337 3.243569 GCTGTAATATGCTCTGACGGTCT 60.244 47.826 9.88 0.00 0.00 3.85
337 338 4.294232 CTGTAATATGCTCTGACGGTCTG 58.706 47.826 9.88 9.18 0.00 3.51
338 339 3.951680 TGTAATATGCTCTGACGGTCTGA 59.048 43.478 15.59 15.59 0.00 3.27
339 340 4.584743 TGTAATATGCTCTGACGGTCTGAT 59.415 41.667 16.57 6.53 0.00 2.90
340 341 3.657015 ATATGCTCTGACGGTCTGATG 57.343 47.619 16.57 12.11 0.00 3.07
341 342 0.463204 ATGCTCTGACGGTCTGATGG 59.537 55.000 16.57 8.58 0.00 3.51
342 343 1.142748 GCTCTGACGGTCTGATGGG 59.857 63.158 16.57 7.96 0.00 4.00
343 344 1.142748 CTCTGACGGTCTGATGGGC 59.857 63.158 16.57 0.00 0.00 5.36
344 345 1.607801 CTCTGACGGTCTGATGGGCA 61.608 60.000 16.57 0.00 0.00 5.36
345 346 0.977627 TCTGACGGTCTGATGGGCAT 60.978 55.000 12.94 0.00 0.00 4.40
346 347 0.531532 CTGACGGTCTGATGGGCATC 60.532 60.000 9.88 0.00 38.29 3.91
347 348 0.977627 TGACGGTCTGATGGGCATCT 60.978 55.000 9.88 0.00 38.60 2.90
348 349 1.040646 GACGGTCTGATGGGCATCTA 58.959 55.000 0.00 0.00 38.60 1.98
349 350 0.753262 ACGGTCTGATGGGCATCTAC 59.247 55.000 0.00 0.00 38.60 2.59
350 351 0.752658 CGGTCTGATGGGCATCTACA 59.247 55.000 0.00 0.00 38.60 2.74
351 352 1.269988 CGGTCTGATGGGCATCTACAG 60.270 57.143 0.00 0.00 38.60 2.74
352 353 1.765314 GGTCTGATGGGCATCTACAGT 59.235 52.381 0.00 0.00 38.60 3.55
353 354 2.965831 GGTCTGATGGGCATCTACAGTA 59.034 50.000 0.00 0.00 38.60 2.74
354 355 3.580458 GGTCTGATGGGCATCTACAGTAT 59.420 47.826 0.00 0.00 38.60 2.12
355 356 4.772624 GGTCTGATGGGCATCTACAGTATA 59.227 45.833 0.00 0.00 38.60 1.47
356 357 5.423610 GGTCTGATGGGCATCTACAGTATAT 59.576 44.000 0.00 0.00 38.60 0.86
357 358 6.406400 GGTCTGATGGGCATCTACAGTATATC 60.406 46.154 0.00 0.00 38.60 1.63
358 359 6.379703 GTCTGATGGGCATCTACAGTATATCT 59.620 42.308 0.00 0.00 38.60 1.98
359 360 6.956435 TCTGATGGGCATCTACAGTATATCTT 59.044 38.462 0.00 0.00 38.60 2.40
360 361 7.123397 TCTGATGGGCATCTACAGTATATCTTC 59.877 40.741 0.00 0.00 38.60 2.87
361 362 6.956435 TGATGGGCATCTACAGTATATCTTCT 59.044 38.462 0.00 0.00 38.60 2.85
362 363 6.596309 TGGGCATCTACAGTATATCTTCTG 57.404 41.667 0.00 0.00 37.65 3.02
363 364 6.314917 TGGGCATCTACAGTATATCTTCTGA 58.685 40.000 8.72 0.00 35.84 3.27
364 365 6.782494 TGGGCATCTACAGTATATCTTCTGAA 59.218 38.462 8.72 0.00 35.84 3.02
365 366 7.455953 TGGGCATCTACAGTATATCTTCTGAAT 59.544 37.037 8.72 0.00 35.84 2.57
366 367 8.317679 GGGCATCTACAGTATATCTTCTGAATT 58.682 37.037 8.72 0.00 35.84 2.17
367 368 9.717942 GGCATCTACAGTATATCTTCTGAATTT 57.282 33.333 8.72 0.00 35.84 1.82
370 371 8.803201 TCTACAGTATATCTTCTGAATTTGCG 57.197 34.615 8.72 0.00 35.84 4.85
371 372 6.851222 ACAGTATATCTTCTGAATTTGCGG 57.149 37.500 8.72 0.00 35.84 5.69
372 373 6.349300 ACAGTATATCTTCTGAATTTGCGGT 58.651 36.000 8.72 0.00 35.84 5.68
373 374 6.823689 ACAGTATATCTTCTGAATTTGCGGTT 59.176 34.615 8.72 0.00 35.84 4.44
374 375 7.128331 CAGTATATCTTCTGAATTTGCGGTTG 58.872 38.462 0.00 0.00 34.02 3.77
375 376 2.704725 TCTTCTGAATTTGCGGTTGC 57.295 45.000 0.00 0.00 43.20 4.17
376 377 2.229792 TCTTCTGAATTTGCGGTTGCT 58.770 42.857 0.00 0.00 43.34 3.91
377 378 2.030893 TCTTCTGAATTTGCGGTTGCTG 60.031 45.455 0.00 0.00 43.34 4.41
378 379 0.039256 TCTGAATTTGCGGTTGCTGC 60.039 50.000 0.00 0.00 43.34 5.25
379 380 0.038892 CTGAATTTGCGGTTGCTGCT 60.039 50.000 0.00 0.00 43.34 4.24
380 381 0.388659 TGAATTTGCGGTTGCTGCTT 59.611 45.000 0.00 0.00 43.34 3.91
381 382 1.063031 GAATTTGCGGTTGCTGCTTC 58.937 50.000 0.00 0.00 43.34 3.86
382 383 0.388659 AATTTGCGGTTGCTGCTTCA 59.611 45.000 0.00 0.00 43.34 3.02
383 384 0.318955 ATTTGCGGTTGCTGCTTCAC 60.319 50.000 0.00 0.00 43.34 3.18
384 385 2.348605 TTTGCGGTTGCTGCTTCACC 62.349 55.000 0.00 3.74 43.34 4.02
385 386 4.389576 GCGGTTGCTGCTTCACCG 62.390 66.667 24.75 24.75 45.67 4.94
386 387 2.972505 CGGTTGCTGCTTCACCGT 60.973 61.111 22.34 0.00 38.94 4.83
387 388 1.666553 CGGTTGCTGCTTCACCGTA 60.667 57.895 22.34 0.00 38.94 4.02
388 389 1.866925 GGTTGCTGCTTCACCGTAC 59.133 57.895 0.00 0.00 0.00 3.67
389 390 1.574702 GGTTGCTGCTTCACCGTACC 61.575 60.000 0.00 0.00 0.00 3.34
390 391 0.602905 GTTGCTGCTTCACCGTACCT 60.603 55.000 0.00 0.00 0.00 3.08
391 392 0.320421 TTGCTGCTTCACCGTACCTC 60.320 55.000 0.00 0.00 0.00 3.85
392 393 1.185618 TGCTGCTTCACCGTACCTCT 61.186 55.000 0.00 0.00 0.00 3.69
393 394 0.037232 GCTGCTTCACCGTACCTCTT 60.037 55.000 0.00 0.00 0.00 2.85
394 395 1.714794 CTGCTTCACCGTACCTCTTG 58.285 55.000 0.00 0.00 0.00 3.02
395 396 1.272490 CTGCTTCACCGTACCTCTTGA 59.728 52.381 0.00 0.00 0.00 3.02
396 397 1.689813 TGCTTCACCGTACCTCTTGAA 59.310 47.619 0.00 0.00 0.00 2.69
397 398 2.301870 TGCTTCACCGTACCTCTTGAAT 59.698 45.455 0.00 0.00 0.00 2.57
398 399 3.244422 TGCTTCACCGTACCTCTTGAATT 60.244 43.478 0.00 0.00 0.00 2.17
399 400 3.751698 GCTTCACCGTACCTCTTGAATTT 59.248 43.478 0.00 0.00 0.00 1.82
400 401 4.378459 GCTTCACCGTACCTCTTGAATTTG 60.378 45.833 0.00 0.00 0.00 2.32
401 402 4.345859 TCACCGTACCTCTTGAATTTGT 57.654 40.909 0.00 0.00 0.00 2.83
406 407 5.011329 ACCGTACCTCTTGAATTTGTGTCTA 59.989 40.000 0.00 0.00 0.00 2.59
411 412 5.707298 ACCTCTTGAATTTGTGTCTATGGTG 59.293 40.000 0.00 0.00 0.00 4.17
428 429 2.225167 TGGTGGGGGACTTTGTATTTCC 60.225 50.000 0.00 0.00 0.00 3.13
438 439 6.255950 GGACTTTGTATTTCCGTTATTCAGC 58.744 40.000 0.00 0.00 0.00 4.26
442 443 9.174166 ACTTTGTATTTCCGTTATTCAGCTAAT 57.826 29.630 0.00 0.00 0.00 1.73
443 444 9.438291 CTTTGTATTTCCGTTATTCAGCTAATG 57.562 33.333 0.00 0.00 0.00 1.90
444 445 7.490962 TGTATTTCCGTTATTCAGCTAATGG 57.509 36.000 0.00 0.00 38.57 3.16
445 446 7.276658 TGTATTTCCGTTATTCAGCTAATGGA 58.723 34.615 4.11 4.11 42.42 3.41
448 449 6.677781 TTCCGTTATTCAGCTAATGGAAAG 57.322 37.500 15.34 0.00 46.44 2.62
449 450 5.123227 TCCGTTATTCAGCTAATGGAAAGG 58.877 41.667 5.57 0.61 41.60 3.11
450 451 4.275936 CCGTTATTCAGCTAATGGAAAGGG 59.724 45.833 0.00 0.00 39.26 3.95
451 452 4.275936 CGTTATTCAGCTAATGGAAAGGGG 59.724 45.833 0.00 0.00 0.00 4.79
509 510 1.071385 CAGGAGTTGAGCACCAAGACT 59.929 52.381 0.00 0.00 35.03 3.24
525 526 4.503296 CCAAGACTACTGTGCTAACAACCT 60.503 45.833 0.00 0.00 35.37 3.50
546 551 1.594397 CGCACGCATGAAGTCATATGT 59.406 47.619 1.90 0.00 34.26 2.29
553 558 4.445718 CGCATGAAGTCATATGTACAGGTC 59.554 45.833 0.33 1.17 34.26 3.85
554 559 4.445718 GCATGAAGTCATATGTACAGGTCG 59.554 45.833 0.33 0.00 34.26 4.79
555 560 5.736207 GCATGAAGTCATATGTACAGGTCGA 60.736 44.000 0.33 0.00 34.26 4.20
585 590 4.250305 ACCCAGCGACCACACACC 62.250 66.667 0.00 0.00 0.00 4.16
586 591 4.248842 CCCAGCGACCACACACCA 62.249 66.667 0.00 0.00 0.00 4.17
587 592 2.972505 CCAGCGACCACACACCAC 60.973 66.667 0.00 0.00 0.00 4.16
589 594 2.203015 AGCGACCACACACCACAC 60.203 61.111 0.00 0.00 0.00 3.82
590 595 2.512745 GCGACCACACACCACACA 60.513 61.111 0.00 0.00 0.00 3.72
591 596 2.819552 GCGACCACACACCACACAC 61.820 63.158 0.00 0.00 0.00 3.82
593 598 1.701545 CGACCACACACCACACACAC 61.702 60.000 0.00 0.00 0.00 3.82
595 600 0.958382 ACCACACACCACACACACAC 60.958 55.000 0.00 0.00 0.00 3.82
596 601 0.957888 CCACACACCACACACACACA 60.958 55.000 0.00 0.00 0.00 3.72
597 602 0.877743 CACACACCACACACACACAA 59.122 50.000 0.00 0.00 0.00 3.33
598 603 1.268079 CACACACCACACACACACAAA 59.732 47.619 0.00 0.00 0.00 2.83
599 604 1.539388 ACACACCACACACACACAAAG 59.461 47.619 0.00 0.00 0.00 2.77
600 605 1.135431 CACACCACACACACACAAAGG 60.135 52.381 0.00 0.00 0.00 3.11
601 606 1.271652 ACACCACACACACACAAAGGA 60.272 47.619 0.00 0.00 0.00 3.36
602 607 1.815613 CACCACACACACACAAAGGAA 59.184 47.619 0.00 0.00 0.00 3.36
603 608 2.230025 CACCACACACACACAAAGGAAA 59.770 45.455 0.00 0.00 0.00 3.13
604 609 3.096092 ACCACACACACACAAAGGAAAT 58.904 40.909 0.00 0.00 0.00 2.17
605 610 3.119173 ACCACACACACACAAAGGAAATG 60.119 43.478 0.00 0.00 0.00 2.32
606 611 3.130164 CCACACACACACAAAGGAAATGA 59.870 43.478 0.00 0.00 0.00 2.57
607 612 4.353737 CACACACACACAAAGGAAATGAG 58.646 43.478 0.00 0.00 0.00 2.90
608 613 3.381272 ACACACACACAAAGGAAATGAGG 59.619 43.478 0.00 0.00 0.00 3.86
609 614 3.631686 CACACACACAAAGGAAATGAGGA 59.368 43.478 0.00 0.00 0.00 3.71
610 615 3.632145 ACACACACAAAGGAAATGAGGAC 59.368 43.478 0.00 0.00 0.00 3.85
611 616 3.885297 CACACACAAAGGAAATGAGGACT 59.115 43.478 0.00 0.00 0.00 3.85
612 617 4.339247 CACACACAAAGGAAATGAGGACTT 59.661 41.667 0.00 0.00 0.00 3.01
613 618 4.580580 ACACACAAAGGAAATGAGGACTTC 59.419 41.667 0.00 0.00 0.00 3.01
632 637 2.803451 TCATGTTTGCCACGACAAAAC 58.197 42.857 0.00 0.00 40.99 2.43
677 684 0.949105 ACACAATCGGTTCGCCTGAC 60.949 55.000 0.00 0.00 34.30 3.51
683 690 3.319198 GGTTCGCCTGACCCTGGA 61.319 66.667 0.00 0.00 0.00 3.86
700 707 1.215647 GATCGTGTGACGCTTCCCT 59.784 57.895 0.00 0.00 42.21 4.20
717 724 3.922375 TCCCTTGAAAACCTGGTGAAAT 58.078 40.909 0.00 0.00 0.00 2.17
754 761 8.095792 TCTCGATCTAGAATATTTAGACTCCGT 58.904 37.037 0.00 0.00 30.46 4.69
755 762 9.368674 CTCGATCTAGAATATTTAGACTCCGTA 57.631 37.037 0.00 5.11 30.46 4.02
756 763 9.887629 TCGATCTAGAATATTTAGACTCCGTAT 57.112 33.333 0.00 0.00 30.46 3.06
760 767 9.935241 TCTAGAATATTTAGACTCCGTATACGT 57.065 33.333 22.87 5.54 37.74 3.57
771 778 1.884579 CCGTATACGTAGCCAGTGGAT 59.115 52.381 22.87 10.00 37.74 3.41
874 881 2.168496 GTCTGCCTGTATATAGCCCGA 58.832 52.381 0.00 0.00 0.00 5.14
879 886 2.100989 CCTGTATATAGCCCGAGACCC 58.899 57.143 0.00 0.00 0.00 4.46
880 887 2.556782 CCTGTATATAGCCCGAGACCCA 60.557 54.545 0.00 0.00 0.00 4.51
890 897 0.321564 CCGAGACCCAACATCAGCAA 60.322 55.000 0.00 0.00 0.00 3.91
940 947 2.210711 GGAGGCCGGGATCGATTCT 61.211 63.158 2.18 0.00 39.00 2.40
941 948 1.005630 GAGGCCGGGATCGATTCTG 60.006 63.158 5.44 5.44 39.00 3.02
952 959 3.255379 GATTCTGTCGACCGCCGC 61.255 66.667 14.12 0.00 38.37 6.53
981 988 3.839432 GAGGGGTCGCCGGAGAAG 61.839 72.222 10.32 0.00 0.00 2.85
984 991 3.703127 GGGTCGCCGGAGAAGGTT 61.703 66.667 10.32 0.00 0.00 3.50
985 992 2.434359 GGTCGCCGGAGAAGGTTG 60.434 66.667 10.32 0.00 0.00 3.77
986 993 2.434359 GTCGCCGGAGAAGGTTGG 60.434 66.667 10.32 0.00 0.00 3.77
987 994 2.920912 TCGCCGGAGAAGGTTGGT 60.921 61.111 5.05 0.00 0.00 3.67
988 995 2.434359 CGCCGGAGAAGGTTGGTC 60.434 66.667 5.05 0.00 0.00 4.02
989 996 2.434359 GCCGGAGAAGGTTGGTCG 60.434 66.667 5.05 0.00 0.00 4.79
990 997 2.264794 CCGGAGAAGGTTGGTCGG 59.735 66.667 0.00 0.00 0.00 4.79
991 998 2.580601 CCGGAGAAGGTTGGTCGGT 61.581 63.158 0.00 0.00 33.63 4.69
992 999 1.080025 CGGAGAAGGTTGGTCGGTC 60.080 63.158 0.00 0.00 0.00 4.79
993 1000 1.080025 GGAGAAGGTTGGTCGGTCG 60.080 63.158 0.00 0.00 0.00 4.79
994 1001 1.080025 GAGAAGGTTGGTCGGTCGG 60.080 63.158 0.00 0.00 0.00 4.79
995 1002 1.813728 GAGAAGGTTGGTCGGTCGGT 61.814 60.000 0.00 0.00 0.00 4.69
996 1003 1.070275 GAAGGTTGGTCGGTCGGTT 59.930 57.895 0.00 0.00 0.00 4.44
997 1004 0.947660 GAAGGTTGGTCGGTCGGTTC 60.948 60.000 0.00 0.00 0.00 3.62
998 1005 2.357881 GGTTGGTCGGTCGGTTCC 60.358 66.667 0.00 0.00 0.00 3.62
999 1006 2.739132 GTTGGTCGGTCGGTTCCT 59.261 61.111 0.00 0.00 0.00 3.36
1095 1102 0.179153 GCCTCCAAGGTACGTACGTC 60.179 60.000 26.53 15.93 37.80 4.34
1096 1103 0.453390 CCTCCAAGGTACGTACGTCC 59.547 60.000 26.53 23.58 0.00 4.79
1097 1104 0.453390 CTCCAAGGTACGTACGTCCC 59.547 60.000 26.53 23.70 0.00 4.46
1107 1119 1.357690 GTACGTCCCGATCGCATGA 59.642 57.895 10.32 2.69 0.00 3.07
1123 1135 0.951558 ATGACCAAACTGGCAACGAC 59.048 50.000 0.00 0.00 42.67 4.34
1151 1163 4.703899 CATTTCTTGCTTTGTTCACTGC 57.296 40.909 0.00 0.00 0.00 4.40
1153 1165 3.698029 TTCTTGCTTTGTTCACTGCTC 57.302 42.857 0.00 0.00 0.00 4.26
1164 1176 0.243907 TCACTGCTCCTCTTACGTGC 59.756 55.000 0.00 0.00 0.00 5.34
1165 1177 0.244994 CACTGCTCCTCTTACGTGCT 59.755 55.000 0.00 0.00 0.00 4.40
1166 1178 0.244994 ACTGCTCCTCTTACGTGCTG 59.755 55.000 0.00 0.00 0.00 4.41
1167 1179 0.244994 CTGCTCCTCTTACGTGCTGT 59.755 55.000 0.00 0.00 0.00 4.40
1168 1180 0.038251 TGCTCCTCTTACGTGCTGTG 60.038 55.000 0.00 0.00 0.00 3.66
1169 1181 1.355066 GCTCCTCTTACGTGCTGTGC 61.355 60.000 0.00 0.00 0.00 4.57
1170 1182 1.073216 CTCCTCTTACGTGCTGTGCG 61.073 60.000 0.00 0.00 0.00 5.34
1171 1183 2.730672 CCTCTTACGTGCTGTGCGC 61.731 63.158 0.00 0.00 39.77 6.09
1387 1399 3.800863 CAGAAGCCGCAGCAGCAG 61.801 66.667 2.79 0.00 43.56 4.24
1389 1401 4.099170 GAAGCCGCAGCAGCAGTG 62.099 66.667 2.79 0.00 43.56 3.66
1395 1407 4.025858 GCAGCAGCAGTGGGAGGA 62.026 66.667 0.00 0.00 41.58 3.71
1396 1408 2.268280 CAGCAGCAGTGGGAGGAG 59.732 66.667 0.00 0.00 0.00 3.69
1397 1409 2.121385 AGCAGCAGTGGGAGGAGA 59.879 61.111 0.00 0.00 0.00 3.71
1398 1410 1.537397 AGCAGCAGTGGGAGGAGAA 60.537 57.895 0.00 0.00 0.00 2.87
1399 1411 1.078567 GCAGCAGTGGGAGGAGAAG 60.079 63.158 0.00 0.00 0.00 2.85
1400 1412 1.548357 GCAGCAGTGGGAGGAGAAGA 61.548 60.000 0.00 0.00 0.00 2.87
1401 1413 0.979665 CAGCAGTGGGAGGAGAAGAA 59.020 55.000 0.00 0.00 0.00 2.52
1402 1414 1.066286 CAGCAGTGGGAGGAGAAGAAG 60.066 57.143 0.00 0.00 0.00 2.85
1403 1415 0.392327 GCAGTGGGAGGAGAAGAAGC 60.392 60.000 0.00 0.00 0.00 3.86
1404 1416 0.979665 CAGTGGGAGGAGAAGAAGCA 59.020 55.000 0.00 0.00 0.00 3.91
1405 1417 0.980423 AGTGGGAGGAGAAGAAGCAC 59.020 55.000 0.00 0.00 0.00 4.40
1567 1579 6.127479 GCTCCATCATGTAGCTAGCTAGTTAT 60.127 42.308 24.78 15.75 33.40 1.89
1601 1613 5.786574 CGTGTCATTGTTATTTGAACCGTAC 59.213 40.000 0.00 0.00 0.00 3.67
1640 1666 1.967319 AATTCAACCCCGGATCGATG 58.033 50.000 0.54 0.00 0.00 3.84
1650 1676 3.401411 GATCGATGCCTCTGCGCG 61.401 66.667 0.54 0.00 41.78 6.86
1807 2084 1.356938 CGTCTACCGCTTTCCCTTTC 58.643 55.000 0.00 0.00 0.00 2.62
1808 2085 1.067071 CGTCTACCGCTTTCCCTTTCT 60.067 52.381 0.00 0.00 0.00 2.52
1809 2086 2.619147 GTCTACCGCTTTCCCTTTCTC 58.381 52.381 0.00 0.00 0.00 2.87
1812 2089 1.652947 ACCGCTTTCCCTTTCTCCTA 58.347 50.000 0.00 0.00 0.00 2.94
1815 2092 2.027100 CCGCTTTCCCTTTCTCCTACTT 60.027 50.000 0.00 0.00 0.00 2.24
1827 2104 7.179516 CCCTTTCTCCTACTTATTATCTCCTCC 59.820 44.444 0.00 0.00 0.00 4.30
1837 2114 2.626255 TATCTCCTCCTGCGACGGCT 62.626 60.000 0.00 0.00 40.82 5.52
1841 2118 2.571757 CTCCTGCGACGGCTACAA 59.428 61.111 0.00 0.00 40.82 2.41
1842 2119 1.517257 CTCCTGCGACGGCTACAAG 60.517 63.158 0.00 0.00 40.82 3.16
1851 2128 1.207593 CGGCTACAAGCACACAAGC 59.792 57.895 0.78 0.00 44.75 4.01
1916 2203 4.301027 CCTCACCGCCCTATCCGC 62.301 72.222 0.00 0.00 0.00 5.54
1971 2260 2.358247 ATCGCAACCCCGTCACAC 60.358 61.111 0.00 0.00 0.00 3.82
1979 2774 1.687840 CCCCGTCACACCCCAGATA 60.688 63.158 0.00 0.00 0.00 1.98
2000 2795 4.579384 CGGCCCAACCACAGGTGT 62.579 66.667 0.00 0.00 39.03 4.16
2075 2870 2.575532 ACCCGCATTTCTCCATGTATG 58.424 47.619 0.00 0.00 0.00 2.39
2089 2884 1.123077 TGTATGCATCGGCTTCTCCT 58.877 50.000 0.19 0.00 41.91 3.69
2091 2886 0.681733 TATGCATCGGCTTCTCCTCC 59.318 55.000 0.19 0.00 41.91 4.30
2092 2887 2.049627 ATGCATCGGCTTCTCCTCCC 62.050 60.000 0.00 0.00 41.91 4.30
2099 2894 1.545706 GGCTTCTCCTCCCACGACTT 61.546 60.000 0.00 0.00 0.00 3.01
2116 2911 2.939103 GACTTCTTCCCATGGATTCACG 59.061 50.000 15.22 0.00 0.00 4.35
2165 2960 2.821378 CCAGATTGCAACATCTGACCAA 59.179 45.455 25.03 0.00 45.22 3.67
2203 2999 7.609918 TGTTGCAATACTATCCACAACATAGTT 59.390 33.333 0.59 0.00 41.58 2.24
2204 3000 7.552458 TGCAATACTATCCACAACATAGTTG 57.448 36.000 8.24 8.24 37.99 3.16
2224 3022 7.634671 AGTTGATGTTGCAATAGATGATCAA 57.365 32.000 0.59 3.70 30.40 2.57
2230 3028 4.174704 TGCAATAGATGATCAAAGGCCT 57.825 40.909 0.00 0.00 0.00 5.19
2235 3033 6.208204 GCAATAGATGATCAAAGGCCTATGTT 59.792 38.462 5.16 0.00 0.00 2.71
2238 3036 5.625150 AGATGATCAAAGGCCTATGTTACC 58.375 41.667 5.16 0.00 0.00 2.85
2307 3106 1.568123 TGGTCCATGTATGCAATGGGA 59.432 47.619 14.53 4.28 36.18 4.37
2337 3136 1.449601 CCATGCGTACCTGGTGACC 60.450 63.158 10.23 0.00 0.00 4.02
2353 3152 2.130073 GACCCAAGCGCAACAAGGTC 62.130 60.000 11.47 14.38 37.25 3.85
2363 3162 0.453793 CAACAAGGTCGGTGTTGCAA 59.546 50.000 0.00 0.00 46.63 4.08
2369 3168 0.317854 GGTCGGTGTTGCAAAGCTTC 60.318 55.000 0.00 0.00 0.00 3.86
2407 3206 3.569701 GTGGTTTGGTCTGTTGATGTGAT 59.430 43.478 0.00 0.00 0.00 3.06
2413 3212 2.421424 GGTCTGTTGATGTGATGAAGGC 59.579 50.000 0.00 0.00 0.00 4.35
2414 3213 3.341823 GTCTGTTGATGTGATGAAGGCT 58.658 45.455 0.00 0.00 0.00 4.58
2439 3238 2.885135 ACCTTGCATCACCAATCTCA 57.115 45.000 0.00 0.00 0.00 3.27
2444 3243 1.211212 TGCATCACCAATCTCAGGGAG 59.789 52.381 0.00 0.00 0.00 4.30
2445 3244 1.211457 GCATCACCAATCTCAGGGAGT 59.789 52.381 0.00 0.00 0.00 3.85
2477 3276 7.737869 TCAATAAGGTTACTTGTGTGGTCTAA 58.262 34.615 0.00 0.00 37.53 2.10
2481 3280 4.760204 AGGTTACTTGTGTGGTCTAATTGC 59.240 41.667 0.00 0.00 0.00 3.56
2490 3289 1.092348 GGTCTAATTGCGACCCCAAC 58.908 55.000 14.57 0.00 44.08 3.77
2514 3314 2.514824 GCGGTGGAGGAAGATGGC 60.515 66.667 0.00 0.00 0.00 4.40
2516 3316 2.514824 GGTGGAGGAAGATGGCGC 60.515 66.667 0.00 0.00 0.00 6.53
2527 3327 2.730672 GATGGCGCGTCTCACACAC 61.731 63.158 13.81 0.00 0.00 3.82
2528 3328 3.513768 ATGGCGCGTCTCACACACA 62.514 57.895 13.81 0.00 0.00 3.72
2529 3329 2.738521 GGCGCGTCTCACACACAT 60.739 61.111 8.43 0.00 0.00 3.21
2530 3330 1.445410 GGCGCGTCTCACACACATA 60.445 57.895 8.43 0.00 0.00 2.29
2531 3331 1.413767 GGCGCGTCTCACACACATAG 61.414 60.000 8.43 0.00 0.00 2.23
2532 3332 0.456142 GCGCGTCTCACACACATAGA 60.456 55.000 8.43 0.00 0.00 1.98
2533 3333 1.539341 CGCGTCTCACACACATAGAG 58.461 55.000 0.00 0.00 0.00 2.43
2534 3334 1.130561 CGCGTCTCACACACATAGAGA 59.869 52.381 0.00 0.00 36.15 3.10
2540 3340 5.485662 TCTCACACACATAGAGACATACG 57.514 43.478 0.00 0.00 33.75 3.06
2541 3341 4.335594 TCTCACACACATAGAGACATACGG 59.664 45.833 0.00 0.00 33.75 4.02
2542 3342 3.380320 TCACACACATAGAGACATACGGG 59.620 47.826 0.00 0.00 0.00 5.28
2543 3343 2.100916 ACACACATAGAGACATACGGGC 59.899 50.000 0.00 0.00 0.00 6.13
2544 3344 2.100749 CACACATAGAGACATACGGGCA 59.899 50.000 0.00 0.00 0.00 5.36
2545 3345 2.965831 ACACATAGAGACATACGGGCAT 59.034 45.455 0.00 0.00 0.00 4.40
2546 3346 3.005897 ACACATAGAGACATACGGGCATC 59.994 47.826 0.00 0.00 0.00 3.91
2547 3347 3.256879 CACATAGAGACATACGGGCATCT 59.743 47.826 0.00 0.00 0.00 2.90
2548 3348 4.459337 CACATAGAGACATACGGGCATCTA 59.541 45.833 0.00 0.00 0.00 1.98
2549 3349 5.048013 CACATAGAGACATACGGGCATCTAA 60.048 44.000 0.00 0.00 0.00 2.10
2550 3350 5.538813 ACATAGAGACATACGGGCATCTAAA 59.461 40.000 0.00 0.00 0.00 1.85
2551 3351 6.211584 ACATAGAGACATACGGGCATCTAAAT 59.788 38.462 0.00 0.00 0.00 1.40
2552 3352 7.396339 ACATAGAGACATACGGGCATCTAAATA 59.604 37.037 0.00 0.00 0.00 1.40
2553 3353 6.665992 AGAGACATACGGGCATCTAAATAA 57.334 37.500 0.00 0.00 0.00 1.40
2554 3354 6.692486 AGAGACATACGGGCATCTAAATAAG 58.308 40.000 0.00 0.00 0.00 1.73
2555 3355 6.493802 AGAGACATACGGGCATCTAAATAAGA 59.506 38.462 0.00 0.00 39.02 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 9.992910 GCAATTTCTGTCAAAATTTTCTCTTTT 57.007 25.926 0.00 0.00 36.86 2.27
46 47 9.165035 TGCAATTTCTGTCAAAATTTTCTCTTT 57.835 25.926 0.00 0.00 36.86 2.52
47 48 8.606602 GTGCAATTTCTGTCAAAATTTTCTCTT 58.393 29.630 0.00 0.00 36.86 2.85
48 49 7.225341 GGTGCAATTTCTGTCAAAATTTTCTCT 59.775 33.333 0.00 0.00 36.86 3.10
49 50 7.347448 GGTGCAATTTCTGTCAAAATTTTCTC 58.653 34.615 0.00 0.00 36.86 2.87
50 51 6.260714 GGGTGCAATTTCTGTCAAAATTTTCT 59.739 34.615 0.00 0.00 36.86 2.52
51 52 6.429624 GGGTGCAATTTCTGTCAAAATTTTC 58.570 36.000 0.00 0.00 36.86 2.29
52 53 5.299028 GGGGTGCAATTTCTGTCAAAATTTT 59.701 36.000 0.00 0.00 36.86 1.82
53 54 4.821260 GGGGTGCAATTTCTGTCAAAATTT 59.179 37.500 0.00 0.00 36.86 1.82
54 55 4.388485 GGGGTGCAATTTCTGTCAAAATT 58.612 39.130 0.00 0.00 38.95 1.82
55 56 3.244526 GGGGGTGCAATTTCTGTCAAAAT 60.245 43.478 0.00 0.00 0.00 1.82
56 57 2.103941 GGGGGTGCAATTTCTGTCAAAA 59.896 45.455 0.00 0.00 0.00 2.44
57 58 1.691434 GGGGGTGCAATTTCTGTCAAA 59.309 47.619 0.00 0.00 0.00 2.69
58 59 1.133199 AGGGGGTGCAATTTCTGTCAA 60.133 47.619 0.00 0.00 0.00 3.18
59 60 0.482446 AGGGGGTGCAATTTCTGTCA 59.518 50.000 0.00 0.00 0.00 3.58
60 61 1.632589 AAGGGGGTGCAATTTCTGTC 58.367 50.000 0.00 0.00 0.00 3.51
61 62 1.970640 GAAAGGGGGTGCAATTTCTGT 59.029 47.619 0.00 0.00 0.00 3.41
62 63 2.232208 GAGAAAGGGGGTGCAATTTCTG 59.768 50.000 13.54 0.00 40.97 3.02
63 64 2.529632 GAGAAAGGGGGTGCAATTTCT 58.470 47.619 10.21 10.21 42.96 2.52
64 65 1.550524 GGAGAAAGGGGGTGCAATTTC 59.449 52.381 0.00 0.00 32.95 2.17
65 66 1.149923 AGGAGAAAGGGGGTGCAATTT 59.850 47.619 0.00 0.00 0.00 1.82
66 67 0.786435 AGGAGAAAGGGGGTGCAATT 59.214 50.000 0.00 0.00 0.00 2.32
67 68 0.040204 CAGGAGAAAGGGGGTGCAAT 59.960 55.000 0.00 0.00 0.00 3.56
68 69 1.360393 ACAGGAGAAAGGGGGTGCAA 61.360 55.000 0.00 0.00 0.00 4.08
69 70 0.474854 TACAGGAGAAAGGGGGTGCA 60.475 55.000 0.00 0.00 0.00 4.57
70 71 0.919710 ATACAGGAGAAAGGGGGTGC 59.080 55.000 0.00 0.00 0.00 5.01
71 72 2.438392 GGTATACAGGAGAAAGGGGGTG 59.562 54.545 5.01 0.00 0.00 4.61
72 73 2.772930 GGTATACAGGAGAAAGGGGGT 58.227 52.381 5.01 0.00 0.00 4.95
73 74 1.692519 CGGTATACAGGAGAAAGGGGG 59.307 57.143 5.01 0.00 0.00 5.40
74 75 2.364647 GACGGTATACAGGAGAAAGGGG 59.635 54.545 7.93 0.00 0.00 4.79
75 76 3.028850 TGACGGTATACAGGAGAAAGGG 58.971 50.000 7.93 0.00 0.00 3.95
76 77 3.952323 TCTGACGGTATACAGGAGAAAGG 59.048 47.826 7.93 0.00 35.20 3.11
77 78 5.578005 TTCTGACGGTATACAGGAGAAAG 57.422 43.478 13.59 3.29 35.20 2.62
78 79 5.988310 TTTCTGACGGTATACAGGAGAAA 57.012 39.130 19.33 19.33 35.20 2.52
79 80 6.540438 AATTTCTGACGGTATACAGGAGAA 57.460 37.500 7.93 10.70 35.20 2.87
80 81 6.153851 TCAAATTTCTGACGGTATACAGGAGA 59.846 38.462 7.93 5.61 35.20 3.71
81 82 6.338146 TCAAATTTCTGACGGTATACAGGAG 58.662 40.000 7.93 3.45 35.20 3.69
82 83 6.288941 TCAAATTTCTGACGGTATACAGGA 57.711 37.500 7.93 0.00 35.20 3.86
83 84 7.553881 AATCAAATTTCTGACGGTATACAGG 57.446 36.000 7.93 0.06 35.20 4.00
84 85 9.840427 AAAAATCAAATTTCTGACGGTATACAG 57.160 29.630 5.01 2.99 35.72 2.74
109 110 9.517868 TCTCGTTTTATTTTGGGGTATAGAAAA 57.482 29.630 0.00 0.00 0.00 2.29
110 111 9.689501 ATCTCGTTTTATTTTGGGGTATAGAAA 57.310 29.630 0.00 0.00 0.00 2.52
111 112 9.689501 AATCTCGTTTTATTTTGGGGTATAGAA 57.310 29.630 0.00 0.00 0.00 2.10
112 113 9.689501 AAATCTCGTTTTATTTTGGGGTATAGA 57.310 29.630 0.00 0.00 0.00 1.98
113 114 9.946165 GAAATCTCGTTTTATTTTGGGGTATAG 57.054 33.333 0.00 0.00 0.00 1.31
114 115 9.689501 AGAAATCTCGTTTTATTTTGGGGTATA 57.310 29.630 0.00 0.00 0.00 1.47
115 116 8.589701 AGAAATCTCGTTTTATTTTGGGGTAT 57.410 30.769 0.00 0.00 0.00 2.73
116 117 8.949177 GTAGAAATCTCGTTTTATTTTGGGGTA 58.051 33.333 0.00 0.00 0.00 3.69
117 118 6.911250 AGAAATCTCGTTTTATTTTGGGGT 57.089 33.333 0.00 0.00 0.00 4.95
118 119 7.255569 GGTAGAAATCTCGTTTTATTTTGGGG 58.744 38.462 0.00 0.00 0.00 4.96
119 120 6.964934 CGGTAGAAATCTCGTTTTATTTTGGG 59.035 38.462 0.00 0.00 0.00 4.12
120 121 7.745015 TCGGTAGAAATCTCGTTTTATTTTGG 58.255 34.615 0.00 0.00 0.00 3.28
121 122 9.601971 TTTCGGTAGAAATCTCGTTTTATTTTG 57.398 29.630 0.00 0.00 41.06 2.44
122 123 9.603298 GTTTCGGTAGAAATCTCGTTTTATTTT 57.397 29.630 0.00 0.00 46.64 1.82
123 124 8.996271 AGTTTCGGTAGAAATCTCGTTTTATTT 58.004 29.630 0.00 0.00 46.64 1.40
124 125 8.543862 AGTTTCGGTAGAAATCTCGTTTTATT 57.456 30.769 0.00 0.00 46.64 1.40
125 126 8.440833 CAAGTTTCGGTAGAAATCTCGTTTTAT 58.559 33.333 0.00 0.00 46.64 1.40
126 127 7.569957 GCAAGTTTCGGTAGAAATCTCGTTTTA 60.570 37.037 0.00 0.00 46.64 1.52
127 128 6.656003 CAAGTTTCGGTAGAAATCTCGTTTT 58.344 36.000 0.00 0.00 46.64 2.43
128 129 5.333875 GCAAGTTTCGGTAGAAATCTCGTTT 60.334 40.000 0.00 0.00 46.64 3.60
129 130 4.151867 GCAAGTTTCGGTAGAAATCTCGTT 59.848 41.667 0.00 0.00 46.64 3.85
130 131 3.678548 GCAAGTTTCGGTAGAAATCTCGT 59.321 43.478 0.00 0.00 46.64 4.18
131 132 3.062234 GGCAAGTTTCGGTAGAAATCTCG 59.938 47.826 0.00 0.00 46.64 4.04
132 133 4.000988 TGGCAAGTTTCGGTAGAAATCTC 58.999 43.478 0.00 0.00 46.64 2.75
133 134 4.015872 TGGCAAGTTTCGGTAGAAATCT 57.984 40.909 0.00 0.00 46.64 2.40
134 135 4.965119 ATGGCAAGTTTCGGTAGAAATC 57.035 40.909 0.00 0.00 46.64 2.17
135 136 4.082245 CCAATGGCAAGTTTCGGTAGAAAT 60.082 41.667 0.00 0.00 46.64 2.17
136 137 3.254657 CCAATGGCAAGTTTCGGTAGAAA 59.745 43.478 0.00 0.00 43.44 2.52
137 138 2.817258 CCAATGGCAAGTTTCGGTAGAA 59.183 45.455 0.00 0.00 33.98 2.10
138 139 2.224670 ACCAATGGCAAGTTTCGGTAGA 60.225 45.455 0.00 0.00 0.00 2.59
139 140 2.159382 ACCAATGGCAAGTTTCGGTAG 58.841 47.619 0.00 0.00 0.00 3.18
140 141 2.279935 ACCAATGGCAAGTTTCGGTA 57.720 45.000 0.00 0.00 0.00 4.02
141 142 2.279935 TACCAATGGCAAGTTTCGGT 57.720 45.000 0.00 0.00 0.00 4.69
142 143 3.730662 CGAATACCAATGGCAAGTTTCGG 60.731 47.826 0.00 5.81 33.15 4.30
143 144 3.425404 CGAATACCAATGGCAAGTTTCG 58.575 45.455 0.00 3.89 0.00 3.46
144 145 3.442273 TCCGAATACCAATGGCAAGTTTC 59.558 43.478 0.00 0.00 0.00 2.78
145 146 3.426615 TCCGAATACCAATGGCAAGTTT 58.573 40.909 0.00 0.00 0.00 2.66
146 147 3.080300 TCCGAATACCAATGGCAAGTT 57.920 42.857 0.00 0.00 0.00 2.66
147 148 2.799126 TCCGAATACCAATGGCAAGT 57.201 45.000 0.00 0.00 0.00 3.16
148 149 5.241506 ACATATTCCGAATACCAATGGCAAG 59.758 40.000 0.00 0.00 0.00 4.01
149 150 5.136828 ACATATTCCGAATACCAATGGCAA 58.863 37.500 0.00 0.00 0.00 4.52
150 151 4.724399 ACATATTCCGAATACCAATGGCA 58.276 39.130 0.00 0.00 0.00 4.92
151 152 8.559536 CATATACATATTCCGAATACCAATGGC 58.440 37.037 0.00 0.00 0.00 4.40
152 153 9.613428 ACATATACATATTCCGAATACCAATGG 57.387 33.333 2.86 0.00 0.00 3.16
161 162 8.482943 CCCAAGGATACATATACATATTCCGAA 58.517 37.037 0.00 0.00 41.41 4.30
162 163 7.842236 TCCCAAGGATACATATACATATTCCGA 59.158 37.037 0.00 0.00 41.41 4.55
163 164 8.018537 TCCCAAGGATACATATACATATTCCG 57.981 38.462 0.00 0.00 41.41 4.30
173 174 9.265862 TGTGAAATTTTTCCCAAGGATACATAT 57.734 29.630 0.00 0.00 36.36 1.78
174 175 8.657387 TGTGAAATTTTTCCCAAGGATACATA 57.343 30.769 0.00 0.00 36.36 2.29
175 176 7.552050 TGTGAAATTTTTCCCAAGGATACAT 57.448 32.000 0.00 0.00 36.36 2.29
176 177 6.985653 TGTGAAATTTTTCCCAAGGATACA 57.014 33.333 0.00 0.00 36.36 2.29
177 178 8.846943 AAATGTGAAATTTTTCCCAAGGATAC 57.153 30.769 0.00 0.00 36.36 2.24
178 179 9.859152 AAAAATGTGAAATTTTTCCCAAGGATA 57.141 25.926 0.29 0.00 36.76 2.59
179 180 8.765488 AAAAATGTGAAATTTTTCCCAAGGAT 57.235 26.923 0.29 0.00 36.76 3.24
229 230 9.301153 CCGCTGCTTTCTATATTTAAACATTTT 57.699 29.630 0.00 0.00 0.00 1.82
230 231 8.682710 TCCGCTGCTTTCTATATTTAAACATTT 58.317 29.630 0.00 0.00 0.00 2.32
231 232 8.220755 TCCGCTGCTTTCTATATTTAAACATT 57.779 30.769 0.00 0.00 0.00 2.71
232 233 7.715249 TCTCCGCTGCTTTCTATATTTAAACAT 59.285 33.333 0.00 0.00 0.00 2.71
233 234 7.011109 GTCTCCGCTGCTTTCTATATTTAAACA 59.989 37.037 0.00 0.00 0.00 2.83
234 235 7.224949 AGTCTCCGCTGCTTTCTATATTTAAAC 59.775 37.037 0.00 0.00 0.00 2.01
235 236 7.272978 AGTCTCCGCTGCTTTCTATATTTAAA 58.727 34.615 0.00 0.00 0.00 1.52
236 237 6.817184 AGTCTCCGCTGCTTTCTATATTTAA 58.183 36.000 0.00 0.00 0.00 1.52
237 238 6.406692 AGTCTCCGCTGCTTTCTATATTTA 57.593 37.500 0.00 0.00 0.00 1.40
238 239 5.283457 AGTCTCCGCTGCTTTCTATATTT 57.717 39.130 0.00 0.00 0.00 1.40
239 240 4.946478 AGTCTCCGCTGCTTTCTATATT 57.054 40.909 0.00 0.00 0.00 1.28
240 241 4.827835 TGTAGTCTCCGCTGCTTTCTATAT 59.172 41.667 0.00 0.00 0.00 0.86
241 242 4.036498 GTGTAGTCTCCGCTGCTTTCTATA 59.964 45.833 0.00 0.00 0.00 1.31
242 243 3.024547 TGTAGTCTCCGCTGCTTTCTAT 58.975 45.455 0.00 0.00 0.00 1.98
243 244 2.163815 GTGTAGTCTCCGCTGCTTTCTA 59.836 50.000 0.00 0.00 0.00 2.10
244 245 1.067495 GTGTAGTCTCCGCTGCTTTCT 60.067 52.381 0.00 0.00 0.00 2.52
245 246 1.336887 TGTGTAGTCTCCGCTGCTTTC 60.337 52.381 0.00 0.00 0.00 2.62
246 247 0.679505 TGTGTAGTCTCCGCTGCTTT 59.320 50.000 0.00 0.00 0.00 3.51
247 248 0.244994 CTGTGTAGTCTCCGCTGCTT 59.755 55.000 0.00 0.00 0.00 3.91
248 249 0.609406 TCTGTGTAGTCTCCGCTGCT 60.609 55.000 0.00 0.00 0.00 4.24
249 250 0.456995 GTCTGTGTAGTCTCCGCTGC 60.457 60.000 0.00 0.00 0.00 5.25
250 251 0.881796 TGTCTGTGTAGTCTCCGCTG 59.118 55.000 0.00 0.00 0.00 5.18
251 252 0.882474 GTGTCTGTGTAGTCTCCGCT 59.118 55.000 0.00 0.00 0.00 5.52
252 253 0.109226 GGTGTCTGTGTAGTCTCCGC 60.109 60.000 0.00 0.00 0.00 5.54
253 254 1.244816 TGGTGTCTGTGTAGTCTCCG 58.755 55.000 0.00 0.00 31.16 4.63
254 255 2.891580 TCTTGGTGTCTGTGTAGTCTCC 59.108 50.000 0.00 0.00 0.00 3.71
255 256 4.021894 ACATCTTGGTGTCTGTGTAGTCTC 60.022 45.833 0.00 0.00 0.00 3.36
256 257 3.898123 ACATCTTGGTGTCTGTGTAGTCT 59.102 43.478 0.00 0.00 0.00 3.24
257 258 4.258702 ACATCTTGGTGTCTGTGTAGTC 57.741 45.455 0.00 0.00 0.00 2.59
258 259 5.480422 TGATACATCTTGGTGTCTGTGTAGT 59.520 40.000 0.00 0.00 33.62 2.73
259 260 5.965922 TGATACATCTTGGTGTCTGTGTAG 58.034 41.667 0.00 0.00 33.62 2.74
260 261 5.624509 GCTGATACATCTTGGTGTCTGTGTA 60.625 44.000 0.00 0.00 32.85 2.90
261 262 4.825422 CTGATACATCTTGGTGTCTGTGT 58.175 43.478 0.00 0.00 33.62 3.72
262 263 3.620374 GCTGATACATCTTGGTGTCTGTG 59.380 47.826 0.00 0.00 32.85 3.66
263 264 3.261643 TGCTGATACATCTTGGTGTCTGT 59.738 43.478 0.00 0.00 32.85 3.41
264 265 3.865446 TGCTGATACATCTTGGTGTCTG 58.135 45.455 0.00 0.00 33.62 3.51
265 266 3.771479 TCTGCTGATACATCTTGGTGTCT 59.229 43.478 0.00 0.00 33.62 3.41
266 267 3.868077 GTCTGCTGATACATCTTGGTGTC 59.132 47.826 0.00 0.00 33.62 3.67
267 268 3.517100 AGTCTGCTGATACATCTTGGTGT 59.483 43.478 0.00 0.00 36.13 4.16
268 269 4.134379 AGTCTGCTGATACATCTTGGTG 57.866 45.455 0.00 0.00 0.00 4.17
269 270 4.833478 AAGTCTGCTGATACATCTTGGT 57.167 40.909 0.00 0.00 0.00 3.67
270 271 5.879223 AGAAAAGTCTGCTGATACATCTTGG 59.121 40.000 0.00 0.00 30.83 3.61
271 272 6.981762 AGAAAAGTCTGCTGATACATCTTG 57.018 37.500 0.00 0.00 30.83 3.02
272 273 8.097038 TGTAAGAAAAGTCTGCTGATACATCTT 58.903 33.333 14.36 14.36 33.05 2.40
273 274 7.615403 TGTAAGAAAAGTCTGCTGATACATCT 58.385 34.615 0.00 0.00 33.05 2.90
274 275 7.547370 ACTGTAAGAAAAGTCTGCTGATACATC 59.453 37.037 0.00 0.00 37.43 3.06
275 276 7.332926 CACTGTAAGAAAAGTCTGCTGATACAT 59.667 37.037 0.00 0.00 37.43 2.29
276 277 6.646653 CACTGTAAGAAAAGTCTGCTGATACA 59.353 38.462 0.00 0.00 37.43 2.29
277 278 6.091441 CCACTGTAAGAAAAGTCTGCTGATAC 59.909 42.308 0.00 0.00 37.43 2.24
278 279 6.166279 CCACTGTAAGAAAAGTCTGCTGATA 58.834 40.000 0.00 0.00 37.43 2.15
279 280 4.999950 CCACTGTAAGAAAAGTCTGCTGAT 59.000 41.667 0.00 0.00 37.43 2.90
280 281 4.141711 ACCACTGTAAGAAAAGTCTGCTGA 60.142 41.667 0.00 0.00 37.43 4.26
281 282 4.024556 CACCACTGTAAGAAAAGTCTGCTG 60.025 45.833 0.00 0.00 37.43 4.41
282 283 4.130118 CACCACTGTAAGAAAAGTCTGCT 58.870 43.478 0.00 0.00 37.43 4.24
283 284 3.304057 GCACCACTGTAAGAAAAGTCTGC 60.304 47.826 0.00 0.00 37.43 4.26
284 285 3.876914 TGCACCACTGTAAGAAAAGTCTG 59.123 43.478 0.00 0.00 37.43 3.51
285 286 4.150897 TGCACCACTGTAAGAAAAGTCT 57.849 40.909 0.00 0.00 37.43 3.24
286 287 4.789802 GCTTGCACCACTGTAAGAAAAGTC 60.790 45.833 3.09 0.00 41.38 3.01
287 288 3.066760 GCTTGCACCACTGTAAGAAAAGT 59.933 43.478 3.09 0.00 41.38 2.66
288 289 3.066621 TGCTTGCACCACTGTAAGAAAAG 59.933 43.478 3.09 0.00 41.38 2.27
289 290 3.020274 TGCTTGCACCACTGTAAGAAAA 58.980 40.909 3.09 0.00 41.38 2.29
290 291 2.357637 GTGCTTGCACCACTGTAAGAAA 59.642 45.455 14.17 0.00 41.38 2.52
291 292 1.946768 GTGCTTGCACCACTGTAAGAA 59.053 47.619 14.17 0.00 41.38 2.52
292 293 1.134250 TGTGCTTGCACCACTGTAAGA 60.134 47.619 21.01 0.00 41.38 2.10
293 294 1.308047 TGTGCTTGCACCACTGTAAG 58.692 50.000 21.01 0.00 41.68 2.34
294 295 1.608109 CATGTGCTTGCACCACTGTAA 59.392 47.619 21.01 3.05 34.38 2.41
295 296 1.237533 CATGTGCTTGCACCACTGTA 58.762 50.000 21.01 3.74 34.38 2.74
296 297 2.035421 CATGTGCTTGCACCACTGT 58.965 52.632 21.01 4.50 34.38 3.55
297 298 1.372499 GCATGTGCTTGCACCACTG 60.372 57.895 21.01 16.17 42.31 3.66
298 299 3.045142 GCATGTGCTTGCACCACT 58.955 55.556 21.01 5.23 42.31 4.00
311 312 3.431233 CCGTCAGAGCATATTACAGCATG 59.569 47.826 0.00 0.00 46.00 4.06
312 313 3.070159 ACCGTCAGAGCATATTACAGCAT 59.930 43.478 0.00 0.00 0.00 3.79
313 314 2.430694 ACCGTCAGAGCATATTACAGCA 59.569 45.455 0.00 0.00 0.00 4.41
314 315 3.053455 GACCGTCAGAGCATATTACAGC 58.947 50.000 0.00 0.00 0.00 4.40
315 316 4.036852 TCAGACCGTCAGAGCATATTACAG 59.963 45.833 0.40 0.00 0.00 2.74
316 317 3.951680 TCAGACCGTCAGAGCATATTACA 59.048 43.478 0.40 0.00 0.00 2.41
317 318 4.569761 TCAGACCGTCAGAGCATATTAC 57.430 45.455 0.40 0.00 0.00 1.89
318 319 4.021981 CCATCAGACCGTCAGAGCATATTA 60.022 45.833 0.40 0.00 0.00 0.98
319 320 3.244009 CCATCAGACCGTCAGAGCATATT 60.244 47.826 0.40 0.00 0.00 1.28
320 321 2.298446 CCATCAGACCGTCAGAGCATAT 59.702 50.000 0.40 0.00 0.00 1.78
321 322 1.683385 CCATCAGACCGTCAGAGCATA 59.317 52.381 0.40 0.00 0.00 3.14
322 323 0.463204 CCATCAGACCGTCAGAGCAT 59.537 55.000 0.40 0.00 0.00 3.79
323 324 1.607801 CCCATCAGACCGTCAGAGCA 61.608 60.000 0.40 0.00 0.00 4.26
324 325 1.142748 CCCATCAGACCGTCAGAGC 59.857 63.158 0.40 0.00 0.00 4.09
325 326 1.142748 GCCCATCAGACCGTCAGAG 59.857 63.158 0.40 0.00 0.00 3.35
326 327 0.977627 ATGCCCATCAGACCGTCAGA 60.978 55.000 0.40 0.00 0.00 3.27
327 328 0.531532 GATGCCCATCAGACCGTCAG 60.532 60.000 0.40 0.00 37.74 3.51
328 329 0.977627 AGATGCCCATCAGACCGTCA 60.978 55.000 10.58 0.00 40.22 4.35
329 330 1.040646 TAGATGCCCATCAGACCGTC 58.959 55.000 10.58 0.00 40.22 4.79
330 331 0.753262 GTAGATGCCCATCAGACCGT 59.247 55.000 10.58 0.00 40.22 4.83
331 332 0.752658 TGTAGATGCCCATCAGACCG 59.247 55.000 10.58 0.00 40.22 4.79
332 333 1.765314 ACTGTAGATGCCCATCAGACC 59.235 52.381 10.58 0.00 40.22 3.85
333 334 4.881019 ATACTGTAGATGCCCATCAGAC 57.119 45.455 10.58 8.26 40.22 3.51
334 335 6.497640 AGATATACTGTAGATGCCCATCAGA 58.502 40.000 10.58 0.00 40.22 3.27
335 336 6.788598 AGATATACTGTAGATGCCCATCAG 57.211 41.667 10.58 3.11 40.22 2.90
336 337 6.956435 AGAAGATATACTGTAGATGCCCATCA 59.044 38.462 10.58 0.00 40.22 3.07
337 338 7.123397 TCAGAAGATATACTGTAGATGCCCATC 59.877 40.741 0.00 0.00 35.71 3.51
338 339 6.956435 TCAGAAGATATACTGTAGATGCCCAT 59.044 38.462 0.00 0.00 35.84 4.00
339 340 6.314917 TCAGAAGATATACTGTAGATGCCCA 58.685 40.000 0.00 0.00 35.84 5.36
340 341 6.842437 TCAGAAGATATACTGTAGATGCCC 57.158 41.667 0.00 0.00 35.84 5.36
341 342 9.717942 AAATTCAGAAGATATACTGTAGATGCC 57.282 33.333 0.00 0.00 35.84 4.40
344 345 9.416794 CGCAAATTCAGAAGATATACTGTAGAT 57.583 33.333 0.00 0.00 35.84 1.98
345 346 7.867909 CCGCAAATTCAGAAGATATACTGTAGA 59.132 37.037 0.00 0.00 35.84 2.59
346 347 7.653713 ACCGCAAATTCAGAAGATATACTGTAG 59.346 37.037 0.00 0.00 35.84 2.74
347 348 7.497595 ACCGCAAATTCAGAAGATATACTGTA 58.502 34.615 0.00 0.00 35.84 2.74
348 349 6.349300 ACCGCAAATTCAGAAGATATACTGT 58.651 36.000 0.00 0.00 35.84 3.55
349 350 6.851222 ACCGCAAATTCAGAAGATATACTG 57.149 37.500 0.00 0.00 35.72 2.74
350 351 6.238484 GCAACCGCAAATTCAGAAGATATACT 60.238 38.462 0.00 0.00 38.36 2.12
351 352 5.909610 GCAACCGCAAATTCAGAAGATATAC 59.090 40.000 0.00 0.00 38.36 1.47
352 353 5.822519 AGCAACCGCAAATTCAGAAGATATA 59.177 36.000 0.00 0.00 42.27 0.86
353 354 4.641989 AGCAACCGCAAATTCAGAAGATAT 59.358 37.500 0.00 0.00 42.27 1.63
354 355 4.009675 AGCAACCGCAAATTCAGAAGATA 58.990 39.130 0.00 0.00 42.27 1.98
355 356 2.821969 AGCAACCGCAAATTCAGAAGAT 59.178 40.909 0.00 0.00 42.27 2.40
356 357 2.030893 CAGCAACCGCAAATTCAGAAGA 60.031 45.455 0.00 0.00 42.27 2.87
357 358 2.322161 CAGCAACCGCAAATTCAGAAG 58.678 47.619 0.00 0.00 42.27 2.85
358 359 1.602668 GCAGCAACCGCAAATTCAGAA 60.603 47.619 0.00 0.00 42.27 3.02
359 360 0.039256 GCAGCAACCGCAAATTCAGA 60.039 50.000 0.00 0.00 42.27 3.27
360 361 0.038892 AGCAGCAACCGCAAATTCAG 60.039 50.000 0.00 0.00 42.27 3.02
361 362 0.388659 AAGCAGCAACCGCAAATTCA 59.611 45.000 0.00 0.00 42.27 2.57
362 363 1.063031 GAAGCAGCAACCGCAAATTC 58.937 50.000 0.00 0.00 42.27 2.17
363 364 0.388659 TGAAGCAGCAACCGCAAATT 59.611 45.000 0.00 0.00 42.27 1.82
364 365 0.318955 GTGAAGCAGCAACCGCAAAT 60.319 50.000 0.00 0.00 42.27 2.32
365 366 1.065600 GTGAAGCAGCAACCGCAAA 59.934 52.632 0.00 0.00 42.27 3.68
366 367 2.721231 GTGAAGCAGCAACCGCAA 59.279 55.556 0.00 0.00 42.27 4.85
367 368 3.286751 GGTGAAGCAGCAACCGCA 61.287 61.111 0.00 0.00 42.27 5.69
368 369 4.389576 CGGTGAAGCAGCAACCGC 62.390 66.667 18.03 3.16 37.16 5.68
370 371 1.574702 GGTACGGTGAAGCAGCAACC 61.575 60.000 0.00 0.00 32.99 3.77
371 372 0.602905 AGGTACGGTGAAGCAGCAAC 60.603 55.000 0.00 0.00 0.00 4.17
372 373 0.320421 GAGGTACGGTGAAGCAGCAA 60.320 55.000 0.00 0.00 0.00 3.91
373 374 1.185618 AGAGGTACGGTGAAGCAGCA 61.186 55.000 0.00 0.00 0.00 4.41
374 375 0.037232 AAGAGGTACGGTGAAGCAGC 60.037 55.000 0.00 0.00 0.00 5.25
375 376 1.272490 TCAAGAGGTACGGTGAAGCAG 59.728 52.381 0.00 0.00 0.00 4.24
376 377 1.334160 TCAAGAGGTACGGTGAAGCA 58.666 50.000 0.00 0.00 0.00 3.91
377 378 2.450609 TTCAAGAGGTACGGTGAAGC 57.549 50.000 0.00 0.00 0.00 3.86
378 379 4.755123 ACAAATTCAAGAGGTACGGTGAAG 59.245 41.667 0.00 0.00 33.43 3.02
379 380 4.513692 CACAAATTCAAGAGGTACGGTGAA 59.486 41.667 0.00 2.81 34.05 3.18
380 381 4.062293 CACAAATTCAAGAGGTACGGTGA 58.938 43.478 0.00 0.00 0.00 4.02
381 382 3.813166 ACACAAATTCAAGAGGTACGGTG 59.187 43.478 0.00 0.00 0.00 4.94
382 383 4.062991 GACACAAATTCAAGAGGTACGGT 58.937 43.478 0.00 0.00 0.00 4.83
383 384 4.315803 AGACACAAATTCAAGAGGTACGG 58.684 43.478 0.00 0.00 0.00 4.02
384 385 6.036083 CCATAGACACAAATTCAAGAGGTACG 59.964 42.308 0.00 0.00 0.00 3.67
385 386 6.879458 ACCATAGACACAAATTCAAGAGGTAC 59.121 38.462 0.00 0.00 0.00 3.34
386 387 6.878923 CACCATAGACACAAATTCAAGAGGTA 59.121 38.462 0.00 0.00 0.00 3.08
387 388 5.707298 CACCATAGACACAAATTCAAGAGGT 59.293 40.000 0.00 0.00 0.00 3.85
388 389 5.124457 CCACCATAGACACAAATTCAAGAGG 59.876 44.000 0.00 0.00 0.00 3.69
389 390 5.124457 CCCACCATAGACACAAATTCAAGAG 59.876 44.000 0.00 0.00 0.00 2.85
390 391 5.009631 CCCACCATAGACACAAATTCAAGA 58.990 41.667 0.00 0.00 0.00 3.02
391 392 4.158394 CCCCACCATAGACACAAATTCAAG 59.842 45.833 0.00 0.00 0.00 3.02
392 393 4.085733 CCCCACCATAGACACAAATTCAA 58.914 43.478 0.00 0.00 0.00 2.69
393 394 3.563261 CCCCCACCATAGACACAAATTCA 60.563 47.826 0.00 0.00 0.00 2.57
394 395 3.023832 CCCCCACCATAGACACAAATTC 58.976 50.000 0.00 0.00 0.00 2.17
395 396 2.652348 TCCCCCACCATAGACACAAATT 59.348 45.455 0.00 0.00 0.00 1.82
396 397 2.025321 GTCCCCCACCATAGACACAAAT 60.025 50.000 0.00 0.00 0.00 2.32
397 398 1.353022 GTCCCCCACCATAGACACAAA 59.647 52.381 0.00 0.00 0.00 2.83
398 399 0.988832 GTCCCCCACCATAGACACAA 59.011 55.000 0.00 0.00 0.00 3.33
399 400 0.118346 AGTCCCCCACCATAGACACA 59.882 55.000 0.00 0.00 0.00 3.72
400 401 1.286248 AAGTCCCCCACCATAGACAC 58.714 55.000 0.00 0.00 0.00 3.67
401 402 1.633432 CAAAGTCCCCCACCATAGACA 59.367 52.381 0.00 0.00 0.00 3.41
406 407 3.565670 GGAAATACAAAGTCCCCCACCAT 60.566 47.826 0.00 0.00 0.00 3.55
411 412 2.502142 ACGGAAATACAAAGTCCCCC 57.498 50.000 0.00 0.00 0.00 5.40
428 429 4.275936 CCCCTTTCCATTAGCTGAATAACG 59.724 45.833 0.00 0.00 0.00 3.18
477 478 2.439507 TCAACTCCTGGTGCTCTTCTTT 59.560 45.455 0.00 0.00 0.00 2.52
480 481 1.943507 GCTCAACTCCTGGTGCTCTTC 60.944 57.143 0.00 0.00 0.00 2.87
481 482 0.036022 GCTCAACTCCTGGTGCTCTT 59.964 55.000 0.00 0.00 0.00 2.85
482 483 1.123861 TGCTCAACTCCTGGTGCTCT 61.124 55.000 0.00 0.00 0.00 4.09
483 484 0.952984 GTGCTCAACTCCTGGTGCTC 60.953 60.000 0.00 0.00 0.00 4.26
484 485 1.072159 GTGCTCAACTCCTGGTGCT 59.928 57.895 0.00 0.00 0.00 4.40
485 486 1.968540 GGTGCTCAACTCCTGGTGC 60.969 63.158 0.00 0.00 0.00 5.01
486 487 0.179020 TTGGTGCTCAACTCCTGGTG 60.179 55.000 0.00 0.00 32.83 4.17
487 488 0.109342 CTTGGTGCTCAACTCCTGGT 59.891 55.000 0.00 0.00 32.83 4.00
488 489 0.397941 TCTTGGTGCTCAACTCCTGG 59.602 55.000 0.00 0.00 32.83 4.45
509 510 1.341852 TGCGAGGTTGTTAGCACAGTA 59.658 47.619 0.00 0.00 34.39 2.74
517 518 0.319986 TCATGCGTGCGAGGTTGTTA 60.320 50.000 0.00 0.00 0.00 2.41
525 526 1.860326 CATATGACTTCATGCGTGCGA 59.140 47.619 0.00 0.00 37.15 5.10
546 551 1.707106 TGGAACCACTTCGACCTGTA 58.293 50.000 0.00 0.00 0.00 2.74
553 558 0.464735 TGGGTGTTGGAACCACTTCG 60.465 55.000 0.00 0.00 42.47 3.79
554 559 1.318576 CTGGGTGTTGGAACCACTTC 58.681 55.000 0.00 0.00 42.47 3.01
555 560 0.755327 GCTGGGTGTTGGAACCACTT 60.755 55.000 0.00 0.00 42.47 3.16
585 590 4.353737 CTCATTTCCTTTGTGTGTGTGTG 58.646 43.478 0.00 0.00 0.00 3.82
586 591 3.381272 CCTCATTTCCTTTGTGTGTGTGT 59.619 43.478 0.00 0.00 0.00 3.72
587 592 3.631686 TCCTCATTTCCTTTGTGTGTGTG 59.368 43.478 0.00 0.00 0.00 3.82
589 594 3.885297 AGTCCTCATTTCCTTTGTGTGTG 59.115 43.478 0.00 0.00 0.00 3.82
590 595 4.170468 AGTCCTCATTTCCTTTGTGTGT 57.830 40.909 0.00 0.00 0.00 3.72
591 596 4.580167 TGAAGTCCTCATTTCCTTTGTGTG 59.420 41.667 0.00 0.00 0.00 3.82
593 598 5.242393 ACATGAAGTCCTCATTTCCTTTGTG 59.758 40.000 0.00 0.00 42.46 3.33
595 600 5.972107 ACATGAAGTCCTCATTTCCTTTG 57.028 39.130 0.00 0.00 42.46 2.77
596 601 6.739565 GCAAACATGAAGTCCTCATTTCCTTT 60.740 38.462 0.00 0.00 42.46 3.11
597 602 5.279156 GCAAACATGAAGTCCTCATTTCCTT 60.279 40.000 0.00 0.00 42.46 3.36
598 603 4.219288 GCAAACATGAAGTCCTCATTTCCT 59.781 41.667 0.00 0.00 42.46 3.36
599 604 4.488879 GCAAACATGAAGTCCTCATTTCC 58.511 43.478 0.00 0.00 42.46 3.13
600 605 4.022068 TGGCAAACATGAAGTCCTCATTTC 60.022 41.667 0.00 0.00 42.46 2.17
601 606 3.896888 TGGCAAACATGAAGTCCTCATTT 59.103 39.130 0.00 0.00 42.46 2.32
602 607 3.256631 GTGGCAAACATGAAGTCCTCATT 59.743 43.478 0.00 0.00 42.46 2.57
603 608 2.821969 GTGGCAAACATGAAGTCCTCAT 59.178 45.455 0.00 0.00 46.25 2.90
604 609 2.229792 GTGGCAAACATGAAGTCCTCA 58.770 47.619 0.00 0.00 38.81 3.86
605 610 1.197721 CGTGGCAAACATGAAGTCCTC 59.802 52.381 0.00 0.00 38.41 3.71
606 611 1.202758 TCGTGGCAAACATGAAGTCCT 60.203 47.619 0.00 0.00 41.99 3.85
607 612 1.069227 GTCGTGGCAAACATGAAGTCC 60.069 52.381 0.00 0.00 46.16 3.85
608 613 1.601903 TGTCGTGGCAAACATGAAGTC 59.398 47.619 0.00 0.00 46.16 3.01
609 614 1.674359 TGTCGTGGCAAACATGAAGT 58.326 45.000 0.00 0.00 46.16 3.01
610 615 2.772568 TTGTCGTGGCAAACATGAAG 57.227 45.000 0.00 0.00 46.16 3.02
611 616 3.182967 GTTTTGTCGTGGCAAACATGAA 58.817 40.909 0.00 1.98 46.16 2.57
612 617 2.164422 TGTTTTGTCGTGGCAAACATGA 59.836 40.909 0.00 0.00 42.69 3.07
613 618 2.534298 TGTTTTGTCGTGGCAAACATG 58.466 42.857 0.00 0.00 37.98 3.21
632 637 3.369756 ACACACAACGTACTCAACTGTTG 59.630 43.478 14.24 14.24 42.78 3.33
661 666 2.106683 GGGTCAGGCGAACCGATTG 61.107 63.158 5.44 0.00 39.88 2.67
668 675 2.721167 CGATCCAGGGTCAGGCGAA 61.721 63.158 0.00 0.00 0.00 4.70
677 684 2.507110 AAGCGTCACACGATCCAGGG 62.507 60.000 0.00 0.00 40.37 4.45
683 690 0.670546 CAAGGGAAGCGTCACACGAT 60.671 55.000 4.29 0.00 44.59 3.73
700 707 7.044798 CACCTTTAATTTCACCAGGTTTTCAA 58.955 34.615 0.00 0.00 35.57 2.69
752 759 3.637998 AATCCACTGGCTACGTATACG 57.362 47.619 23.24 23.24 46.33 3.06
754 761 3.322828 GGGAAATCCACTGGCTACGTATA 59.677 47.826 0.00 0.00 37.91 1.47
755 762 2.104281 GGGAAATCCACTGGCTACGTAT 59.896 50.000 0.00 0.00 37.91 3.06
756 763 1.483415 GGGAAATCCACTGGCTACGTA 59.517 52.381 1.22 0.00 37.91 3.57
757 764 0.252197 GGGAAATCCACTGGCTACGT 59.748 55.000 1.22 0.00 37.91 3.57
758 765 0.810031 CGGGAAATCCACTGGCTACG 60.810 60.000 1.22 0.00 37.91 3.51
759 766 0.252197 ACGGGAAATCCACTGGCTAC 59.748 55.000 1.22 0.00 37.91 3.58
760 767 0.988832 AACGGGAAATCCACTGGCTA 59.011 50.000 1.22 0.00 37.91 3.93
874 881 1.251251 GCTTTGCTGATGTTGGGTCT 58.749 50.000 0.00 0.00 0.00 3.85
879 886 0.387622 CGGTGGCTTTGCTGATGTTG 60.388 55.000 0.00 0.00 0.00 3.33
880 887 1.526575 CCGGTGGCTTTGCTGATGTT 61.527 55.000 0.00 0.00 0.00 2.71
904 911 1.639534 CACCACGACAACGACAACC 59.360 57.895 0.00 0.00 42.66 3.77
905 912 0.806884 TCCACCACGACAACGACAAC 60.807 55.000 0.00 0.00 42.66 3.32
935 942 3.255379 GCGGCGGTCGACAGAATC 61.255 66.667 20.25 6.93 42.43 2.52
964 971 3.839432 CTTCTCCGGCGACCCCTC 61.839 72.222 9.30 0.00 0.00 4.30
967 974 3.703127 AACCTTCTCCGGCGACCC 61.703 66.667 9.30 0.00 0.00 4.46
968 975 2.434359 CAACCTTCTCCGGCGACC 60.434 66.667 9.30 0.00 0.00 4.79
969 976 2.434359 CCAACCTTCTCCGGCGAC 60.434 66.667 9.30 0.00 0.00 5.19
970 977 2.920912 ACCAACCTTCTCCGGCGA 60.921 61.111 9.30 0.00 0.00 5.54
971 978 2.434359 GACCAACCTTCTCCGGCG 60.434 66.667 0.00 0.00 0.00 6.46
972 979 2.434359 CGACCAACCTTCTCCGGC 60.434 66.667 0.00 0.00 0.00 6.13
973 980 2.264794 CCGACCAACCTTCTCCGG 59.735 66.667 0.00 0.00 0.00 5.14
974 981 1.080025 GACCGACCAACCTTCTCCG 60.080 63.158 0.00 0.00 0.00 4.63
975 982 1.080025 CGACCGACCAACCTTCTCC 60.080 63.158 0.00 0.00 0.00 3.71
976 983 1.080025 CCGACCGACCAACCTTCTC 60.080 63.158 0.00 0.00 0.00 2.87
977 984 1.405272 AACCGACCGACCAACCTTCT 61.405 55.000 0.00 0.00 0.00 2.85
978 985 0.947660 GAACCGACCGACCAACCTTC 60.948 60.000 0.00 0.00 0.00 3.46
979 986 1.070275 GAACCGACCGACCAACCTT 59.930 57.895 0.00 0.00 0.00 3.50
980 987 2.739132 GAACCGACCGACCAACCT 59.261 61.111 0.00 0.00 0.00 3.50
981 988 1.535204 TAGGAACCGACCGACCAACC 61.535 60.000 0.00 0.00 34.73 3.77
982 989 0.533951 ATAGGAACCGACCGACCAAC 59.466 55.000 0.00 0.00 34.73 3.77
983 990 0.533491 CATAGGAACCGACCGACCAA 59.467 55.000 0.00 0.00 34.73 3.67
984 991 0.612732 ACATAGGAACCGACCGACCA 60.613 55.000 0.00 0.00 34.73 4.02
985 992 0.101939 GACATAGGAACCGACCGACC 59.898 60.000 0.00 0.00 34.73 4.79
986 993 0.248377 CGACATAGGAACCGACCGAC 60.248 60.000 0.00 0.00 34.73 4.79
987 994 0.392863 TCGACATAGGAACCGACCGA 60.393 55.000 0.00 0.00 34.73 4.69
988 995 0.452987 TTCGACATAGGAACCGACCG 59.547 55.000 0.00 0.00 34.73 4.79
989 996 1.747355 TCTTCGACATAGGAACCGACC 59.253 52.381 0.00 0.00 0.00 4.79
990 997 2.223525 CCTCTTCGACATAGGAACCGAC 60.224 54.545 1.41 0.00 31.64 4.79
991 998 2.022195 CCTCTTCGACATAGGAACCGA 58.978 52.381 1.41 0.00 31.64 4.69
992 999 2.022195 TCCTCTTCGACATAGGAACCG 58.978 52.381 7.04 0.00 36.47 4.44
993 1000 2.223525 CGTCCTCTTCGACATAGGAACC 60.224 54.545 10.37 0.91 41.01 3.62
994 1001 2.223525 CCGTCCTCTTCGACATAGGAAC 60.224 54.545 10.37 5.67 41.01 3.62
995 1002 2.022195 CCGTCCTCTTCGACATAGGAA 58.978 52.381 10.37 0.00 41.01 3.36
996 1003 1.064906 ACCGTCCTCTTCGACATAGGA 60.065 52.381 5.65 5.65 37.07 2.94
997 1004 1.065701 CACCGTCCTCTTCGACATAGG 59.934 57.143 1.25 1.25 32.74 2.57
998 1005 1.534175 GCACCGTCCTCTTCGACATAG 60.534 57.143 0.00 0.00 32.74 2.23
999 1006 0.454600 GCACCGTCCTCTTCGACATA 59.545 55.000 0.00 0.00 32.74 2.29
1095 1102 0.744414 AGTTTGGTCATGCGATCGGG 60.744 55.000 18.30 0.00 0.00 5.14
1096 1103 0.374758 CAGTTTGGTCATGCGATCGG 59.625 55.000 18.30 0.00 0.00 4.18
1097 1104 0.374758 CCAGTTTGGTCATGCGATCG 59.625 55.000 11.69 11.69 31.35 3.69
1107 1119 2.830285 GCGTCGTTGCCAGTTTGGT 61.830 57.895 0.00 0.00 40.46 3.67
1142 1154 1.961394 ACGTAAGAGGAGCAGTGAACA 59.039 47.619 0.00 0.00 43.62 3.18
1146 1158 0.244994 AGCACGTAAGAGGAGCAGTG 59.755 55.000 0.00 0.00 43.62 3.66
1151 1163 1.073216 CGCACAGCACGTAAGAGGAG 61.073 60.000 0.00 0.00 43.62 3.69
1153 1165 3.463505 CGCACAGCACGTAAGAGG 58.536 61.111 0.00 0.00 43.62 3.69
1385 1397 0.979665 TGCTTCTTCTCCTCCCACTG 59.020 55.000 0.00 0.00 0.00 3.66
1386 1398 0.980423 GTGCTTCTTCTCCTCCCACT 59.020 55.000 0.00 0.00 0.00 4.00
1387 1399 0.390472 CGTGCTTCTTCTCCTCCCAC 60.390 60.000 0.00 0.00 0.00 4.61
1389 1401 0.390472 CACGTGCTTCTTCTCCTCCC 60.390 60.000 0.82 0.00 0.00 4.30
1390 1402 0.390472 CCACGTGCTTCTTCTCCTCC 60.390 60.000 10.91 0.00 0.00 4.30
1391 1403 1.016653 GCCACGTGCTTCTTCTCCTC 61.017 60.000 10.91 0.00 36.87 3.71
1392 1404 1.004440 GCCACGTGCTTCTTCTCCT 60.004 57.895 10.91 0.00 36.87 3.69
1393 1405 2.383527 CGCCACGTGCTTCTTCTCC 61.384 63.158 10.91 0.00 38.05 3.71
1394 1406 2.383527 CCGCCACGTGCTTCTTCTC 61.384 63.158 10.91 0.00 38.05 2.87
1395 1407 2.357517 CCGCCACGTGCTTCTTCT 60.358 61.111 10.91 0.00 38.05 2.85
1396 1408 4.090057 GCCGCCACGTGCTTCTTC 62.090 66.667 10.91 0.00 38.05 2.87
1567 1579 3.364889 ACAATGACACGAAGAGACGAA 57.635 42.857 0.00 0.00 37.03 3.85
1650 1676 2.813179 CGGTGGAATGCTAGTGCGC 61.813 63.158 0.00 0.00 43.34 6.09
1651 1677 1.447838 ACGGTGGAATGCTAGTGCG 60.448 57.895 0.00 0.00 43.34 5.34
1652 1678 0.391130 TCACGGTGGAATGCTAGTGC 60.391 55.000 8.50 0.00 40.20 4.40
1653 1679 2.315925 ATCACGGTGGAATGCTAGTG 57.684 50.000 8.50 0.00 0.00 2.74
1807 2084 5.124776 CGCAGGAGGAGATAATAAGTAGGAG 59.875 48.000 0.00 0.00 0.00 3.69
1808 2085 5.010933 CGCAGGAGGAGATAATAAGTAGGA 58.989 45.833 0.00 0.00 0.00 2.94
1809 2086 5.010933 TCGCAGGAGGAGATAATAAGTAGG 58.989 45.833 0.00 0.00 0.00 3.18
1812 2089 3.253677 CGTCGCAGGAGGAGATAATAAGT 59.746 47.826 0.00 0.00 0.00 2.24
1815 2092 2.160205 CCGTCGCAGGAGGAGATAATA 58.840 52.381 0.00 0.00 0.00 0.98
1827 2104 2.432456 TGCTTGTAGCCGTCGCAG 60.432 61.111 0.00 0.00 41.51 5.18
1837 2114 3.902261 CAGAATGCTTGTGTGCTTGTA 57.098 42.857 0.00 0.00 0.00 2.41
1851 2128 3.197790 CACCCGCTCGGCAGAATG 61.198 66.667 2.18 0.00 40.87 2.67
1897 2174 2.446036 GGATAGGGCGGTGAGGGT 60.446 66.667 0.00 0.00 0.00 4.34
1899 2186 4.301027 GCGGATAGGGCGGTGAGG 62.301 72.222 0.00 0.00 0.00 3.86
1917 2204 4.754667 GGAGGGTTCCGGCGTGAC 62.755 72.222 6.01 3.53 32.79 3.67
1946 2235 2.047655 GGGTTGCGATGGACGACA 60.048 61.111 0.00 0.00 45.77 4.35
1971 2260 4.351054 GGGCCGGCATATCTGGGG 62.351 72.222 30.85 0.00 41.76 4.96
1974 2769 1.898574 GGTTGGGCCGGCATATCTG 60.899 63.158 30.85 0.00 0.00 2.90
2000 2795 1.692749 GGTGGATGGGGCTAGTCCA 60.693 63.158 16.93 12.32 39.61 4.02
2003 2798 3.480133 GCGGTGGATGGGGCTAGT 61.480 66.667 0.00 0.00 0.00 2.57
2053 2848 2.799126 ACATGGAGAAATGCGGGTTA 57.201 45.000 0.00 0.00 0.00 2.85
2075 2870 2.110006 GGGAGGAGAAGCCGATGC 59.890 66.667 0.00 0.00 43.43 3.91
2089 2884 0.613260 CATGGGAAGAAGTCGTGGGA 59.387 55.000 0.00 0.00 0.00 4.37
2091 2886 0.613260 TCCATGGGAAGAAGTCGTGG 59.387 55.000 13.02 0.00 0.00 4.94
2092 2887 2.698855 ATCCATGGGAAGAAGTCGTG 57.301 50.000 13.02 0.00 34.34 4.35
2099 2894 0.617935 TGCGTGAATCCATGGGAAGA 59.382 50.000 13.02 0.00 34.34 2.87
2116 2911 2.023741 CGATTGCACGCTCCATGC 59.976 61.111 0.00 0.00 43.68 4.06
2203 2999 6.460537 GCCTTTGATCATCTATTGCAACATCA 60.461 38.462 0.00 0.27 0.00 3.07
2204 3000 5.919141 GCCTTTGATCATCTATTGCAACATC 59.081 40.000 0.00 0.00 0.00 3.06
2224 3022 2.856231 TCCATTGGGTAACATAGGCCTT 59.144 45.455 12.58 0.00 39.74 4.35
2230 3028 6.153680 GGTTTTGTCATCCATTGGGTAACATA 59.846 38.462 2.09 0.00 39.74 2.29
2235 3033 3.181417 TGGGTTTTGTCATCCATTGGGTA 60.181 43.478 2.09 0.00 34.93 3.69
2238 3036 3.261390 ACATGGGTTTTGTCATCCATTGG 59.739 43.478 0.00 0.00 37.86 3.16
2297 3096 2.367567 GCCTTTGATCATCCCATTGCAT 59.632 45.455 0.00 0.00 0.00 3.96
2298 3097 1.758280 GCCTTTGATCATCCCATTGCA 59.242 47.619 0.00 0.00 0.00 4.08
2299 3098 1.069668 GGCCTTTGATCATCCCATTGC 59.930 52.381 0.00 0.00 0.00 3.56
2300 3099 1.690352 GGGCCTTTGATCATCCCATTG 59.310 52.381 0.84 0.00 36.96 2.82
2302 3101 0.935942 TGGGCCTTTGATCATCCCAT 59.064 50.000 16.81 0.00 41.71 4.00
2303 3102 2.407803 TGGGCCTTTGATCATCCCA 58.592 52.632 16.81 16.81 44.16 4.37
2304 3103 1.335145 CATGGGCCTTTGATCATCCC 58.665 55.000 4.53 13.10 37.49 3.85
2307 3106 0.396139 ACGCATGGGCCTTTGATCAT 60.396 50.000 10.10 0.00 36.38 2.45
2337 3136 2.252260 CGACCTTGTTGCGCTTGG 59.748 61.111 9.73 6.07 0.00 3.61
2353 3152 1.370414 CGGAAGCTTTGCAACACCG 60.370 57.895 0.00 2.90 0.00 4.94
2369 3168 5.179368 CCAAACCACTATATATTGTGCTCGG 59.821 44.000 18.42 12.60 33.23 4.63
2379 3178 7.768582 CACATCAACAGACCAAACCACTATATA 59.231 37.037 0.00 0.00 0.00 0.86
2381 3180 5.937540 CACATCAACAGACCAAACCACTATA 59.062 40.000 0.00 0.00 0.00 1.31
2382 3181 4.761739 CACATCAACAGACCAAACCACTAT 59.238 41.667 0.00 0.00 0.00 2.12
2384 3183 2.951642 CACATCAACAGACCAAACCACT 59.048 45.455 0.00 0.00 0.00 4.00
2385 3184 2.948979 TCACATCAACAGACCAAACCAC 59.051 45.455 0.00 0.00 0.00 4.16
2386 3185 3.289407 TCACATCAACAGACCAAACCA 57.711 42.857 0.00 0.00 0.00 3.67
2387 3186 3.820467 TCATCACATCAACAGACCAAACC 59.180 43.478 0.00 0.00 0.00 3.27
2388 3187 5.437289 TTCATCACATCAACAGACCAAAC 57.563 39.130 0.00 0.00 0.00 2.93
2389 3188 4.520111 CCTTCATCACATCAACAGACCAAA 59.480 41.667 0.00 0.00 0.00 3.28
2407 3206 1.350684 TGCAAGGTACATCAGCCTTCA 59.649 47.619 0.00 0.00 42.68 3.02
2439 3238 9.503369 AGTAACCTTATTGATAAACTACTCCCT 57.497 33.333 0.00 0.00 0.00 4.20
2514 3314 1.130561 TCTCTATGTGTGTGAGACGCG 59.869 52.381 3.53 3.53 37.96 6.01
2527 3327 5.644977 TTAGATGCCCGTATGTCTCTATG 57.355 43.478 0.00 0.00 0.00 2.23
2528 3328 6.859112 ATTTAGATGCCCGTATGTCTCTAT 57.141 37.500 0.00 0.00 0.00 1.98
2529 3329 7.668469 TCTTATTTAGATGCCCGTATGTCTCTA 59.332 37.037 0.00 0.00 0.00 2.43
2530 3330 6.493802 TCTTATTTAGATGCCCGTATGTCTCT 59.506 38.462 0.00 0.00 0.00 3.10
2531 3331 6.688578 TCTTATTTAGATGCCCGTATGTCTC 58.311 40.000 0.00 0.00 0.00 3.36
2532 3332 6.665992 TCTTATTTAGATGCCCGTATGTCT 57.334 37.500 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.